MELO3C010049 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010049
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Riboflavin biosynthesis protein RibD
Location	chr2 : 11760860 .. 11761243 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTTCTCTTTAGTTCCTTCTTCCCCTATAATCTGTTTCTCAAGGCCGGCAGCGGCTGCGATCTCCACCTCTACGAGTTCCCTCTCTCAATATCAATATTCCTTGGAATCCACATTCATCCGCCGCGCCGCTGAGATCGCCGATAAATCAGCCGGATTCACAGCTCCACATCCCAACTATGGCTGTATTGTCGCTACTGCTTCCGGCGATATTGCCGGGGAGGGTTTCCTCTTTGGGCAGGGCACCAAATCGGCTGAAGTTCAGGCTGTGGAAGAAGCCGGCGAATACTGCCGTGGAGGTACAGCGTTTCTTAATTTGGAGTCCAGTGAATGCGCCGGCGACGACATTGCTGTTTCGGCGTTGGTCCAGGTTCGGCAGTAG

mRNA sequence

ATGATCTTCTCTTTAGTTCCTTCTTCCCCTATAATCTGTTTCTCAAGGCCGGCAGCGGCTGCGATCTCCACCTCTACGAGTTCCCTCTCTCAATATCAATATTCCTTGGAATCCACATTCATCCGCCGCGCCGCTGAGATCGCCGATAAATCAGCCGGATTCACAGCTCCACATCCCAACTATGGCTGTATTGTCGCTACTGCTTCCGGCGATATTGCCGGGGAGGGTTTCCTCTTTGGGCAGGGCACCAAATCGGCTGAAGTTCAGGCTGTGGAAGAAGCCGGCGAATACTGCCGTGGAGGTACAGCGTTTCTTAATTTGGAGTCCAGTGAATGCGCCGGCGACGACATTGCTGTTTCGGCGTTGGTCCAGGTTCGGCAGTAG

Coding sequence (CDS)

ATGATCTTCTCTTTAGTTCCTTCTTCCCCTATAATCTGTTTCTCAAGGCCGGCAGCGGCTGCGATCTCCACCTCTACGAGTTCCCTCTCTCAATATCAATATTCCTTGGAATCCACATTCATCCGCCGCGCCGCTGAGATCGCCGATAAATCAGCCGGATTCACAGCTCCACATCCCAACTATGGCTGTATTGTCGCTACTGCTTCCGGCGATATTGCCGGGGAGGGTTTCCTCTTTGGGCAGGGCACCAAATCGGCTGAAGTTCAGGCTGTGGAAGAAGCCGGCGAATACTGCCGTGGAGGTACAGCGTTTCTTAATTTGGAGTCCAGTGAATGCGCCGGCGACGACATTGCTGTTTCGGCGTTGGTCCAGGTTCGGCAGTAG

Protein sequence

MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVSALVQVRQ*

Homology

[Close]

BLAST of MELO3C010049 vs. Swiss-Prot
Match: RIBRX_ARATH (Riboflavin biosynthesis protein PYRR, chloroplastic OS=Arabidopsis thaliana GN=PYRR PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-29
Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 1


Query: 3   FSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPNYG 62
           F +  SSP+IC +       + S    S+  ++ ++ FIRRAA++++ SAG T+PHPN+G
Sbjct: 5   FRISSSSPLICRA-------TLSNGDNSRNYHTTDAAFIRRAADLSEMSAGLTSPHPNFG 64

Query: 63  CIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVSAL 122
           C++AT+SG +AGEG+L+ QGTK AE  AVE AGE+ RG TA+LN+E  +C GD  AVSAL
Sbjct: 65  CVIATSSGKVAGEGYLYAQGTKPAEALAVEAAGEFSRGATAYLNMEPGDCHGDHTAVSAL 119

Query: 123 VQ 125
           VQ
Sbjct: 125 VQ 119

[Close]

BLAST of MELO3C010049 vs. Swiss-Prot
Match: RIBRX_MAIZE (Riboflavin biosynthesis protein PYRR, chloroplastic OS=Zea mays GN=PYRR PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-24
Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 1


Query: 19  AAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPNYGCIVA-----TASGD-- 78
           A A ++S    S   ++ ++  +RRAA++AD+SAG T+PHPN+GC++A     T S D  
Sbjct: 36  APAAASSFVPASHSSHANDAMLLRRAADVADRSAGLTSPHPNFGCVIARPQLNTDSADSW 95

Query: 79  IAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVSALVQ 125
           + GEGFL+ QGT  AE+ A +EAGE+ RGGTA+LNLE  +C GD+ AV +LVQ
Sbjct: 96  VVGEGFLYAQGTPCAELLASQEAGEHARGGTAYLNLEPGDCFGDNTAVGSLVQ 148

[Close]

BLAST of MELO3C010049 vs. Swiss-Prot
Match: RIBD_MAIZE (Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays GN=PYRD PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 6   VPSSPIICFSRPAAAAISTSTSSLSQYQYSLEST-FIRRAAEIADKSAGFTAPHPNYGCI 65
           V ++ +   +RP  AA + S    +Q    L+   ++RR  E+A K+AG T+P+P  GC+
Sbjct: 16  VRAATLASATRPRLAAGALSGRCQAQAAGDLDDAHYMRRCVELARKAAGHTSPNPMVGCV 75

Query: 66  VATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLE 109
           +    G + GEGF    G   AEV A+ +AG      TA+++LE
Sbjct: 76  I-VRDGRVVGEGFHPKAGQPHAEVFALRDAGNLAENATAYVSLE 118

[Close]

BLAST of MELO3C010049 vs. Swiss-Prot
Match: RIBD_HAEIN (Riboflavin biosynthesis protein RibD OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ribD PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 1


Query: 35  SLESTFIRRAAEIADKSAGFTAPHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEA 94
           S +  F++RA ++A K    T P+P+ GC++   +G+I GEGF F  G   AE  A+ +A
Sbjct: 6   SQDCVFMQRALDLAAKGQYTTTPNPSVGCVLVK-NGEIVGEGFHFKAGQPHAERVALAQA 65

Query: 95  GEYCRGGTAFLNLE 109
           GE  +G TA++ LE
Sbjct: 66  GENAKGATAYVTLE 78

[Close]

BLAST of MELO3C010049 vs. Swiss-Prot
Match: RIBD_ARATH (Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana GN=PYRD PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1


Query: 37  ESTFIRRAAEIADKSAGFTAPHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGE 96
           +S ++R+  E+A ++ G T+P+P  GC++    GDI G+GF    G   AEV A+ +AGE
Sbjct: 74  DSFYMRKCVELAKRAIGCTSPNPMVGCVIVK-DGDIVGQGFHPKAGQPHAEVFALRDAGE 133

Query: 97  YCRGGTAFLNLE 109
                TA+++LE
Sbjct: 134 LAENATAYVSLE 144

[Close]

BLAST of MELO3C010049 vs. TrEMBL
Match: A0A0A0LXT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G655930 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-59
Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPN 60
           MIFSLVPSSPIICFSRPAAAAISTST+SLSQ QYSLESTFIRRAAEIADKSAGFTAPHPN
Sbjct: 1   MIFSLVPSSPIICFSRPAAAAISTSTTSLSQSQYSLESTFIRRAAEIADKSAGFTAPHPN 60

Query: 61  YGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVS 120
           YGCIVAT SG +AG+GFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLE SECAGDDIAVS
Sbjct: 61  YGCIVATPSGAVAGQGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLEPSECAGDDIAVS 120

Query: 121 ALVQVRQ 128
           ALVQVRQ
Sbjct: 121 ALVQVRQ 127

[Close]

BLAST of MELO3C010049 vs. TrEMBL
Match: A0A0A0M0K4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G655950 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.6e-37
Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSR-----PAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFT 60
           M+F+L  S PI+  +R      +AAA +T+ SS S   +  E+TFIRRAAEIADKSAGFT
Sbjct: 1   MVFTLGASFPILHANRLPTAVVSAAATTTNPSSNSSTSHLFEATFIRRAAEIADKSAGFT 60

Query: 61  APHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGD 120
           APHPNYGCI+ T+SG +AGEGFL+GQGT+SAE+QAV+ AGE CRG TAFLNLESS+C  D
Sbjct: 61  APHPNYGCIITTSSGAVAGEGFLYGQGTESAELQAVQAAGERCRGATAFLNLESSDCPSD 120

Query: 121 DIAVSALVQ 125
           + AV+ALVQ
Sbjct: 121 NTAVAALVQ 129

[Close]

BLAST of MELO3C010049 vs. TrEMBL
Match: M5WQV5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003150mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.6e-29
Identity = 69/126 (54.76%), Postives = 91/126 (72.22%), Query Frame = 1


Query: 8   SSPII---CFSRPAAAAISTSTSSLSQYQ------YSLESTFIRRAAEIADKSAGFTAPH 67
           SSP++   C   PA+AA +T+ S+ +         ++L++  IRRAAE+ADKSAGFT+PH
Sbjct: 4   SSPLMRVSCSPTPASAAAATTRSNNNNKNNNFLCTHALDAVHIRRAAELADKSAGFTSPH 63

Query: 68  PNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIA 125
           PN+GC++AT SG +AGEGFL+ QGTK AEV A E AG + R GTA+LN+E  +C GD  A
Sbjct: 64  PNFGCVIATQSGKVAGEGFLYAQGTKPAEVLAAEAAGNFSRRGTAYLNMEPGDCHGDHAA 123

[Close]

BLAST of MELO3C010049 vs. TrEMBL
Match: A0A072U1X8_MEDTR (Riboflavin biosynthesis protein RibD OS=Medicago truncatula GN=MTR_7g080117 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.4e-29
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 1


Query: 2   IFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPNY 61
           ++ L P +    FS    + I    +S   + ++L++ +IRRAA IADKSAGFT+PHPN+
Sbjct: 1   MWCLTPIANTFSFS----SIICKCKASNDTHNHALDAGYIRRAALIADKSAGFTSPHPNF 60

Query: 62  GCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVSA 121
           GC++AT SGD+AGEG+L+ QGT  AEVQAV  AGE CRG TA+LN+E  +C GD+ AVSA
Sbjct: 61  GCVIATPSGDVAGEGYLYAQGTSPAEVQAVTSAGERCRGATAYLNMEPGDCDGDNTAVSA 119

Query: 122 LVQ 125
           L+Q
Sbjct: 121 LLQ 119

[Close]

BLAST of MELO3C010049 vs. TrEMBL
Match: A0A072U154_MEDTR (Riboflavin biosynthesis protein RibD OS=Medicago truncatula GN=MTR_7g080117 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.4e-29
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 1


Query: 2   IFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPNY 61
           ++ L P +    FS    + I    +S   + ++L++ +IRRAA IADKSAGFT+PHPN+
Sbjct: 1   MWCLTPIANTFSFS----SIICKCKASNDTHNHALDAGYIRRAALIADKSAGFTSPHPNF 60

Query: 62  GCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVSA 121
           GC++AT SGD+AGEG+L+ QGT  AEVQAV  AGE CRG TA+LN+E  +C GD+ AVSA
Sbjct: 61  GCVIATPSGDVAGEGYLYAQGTSPAEVQAVTSAGERCRGATAYLNMEPGDCDGDNTAVSA 119

Query: 122 LVQ 125
           L+Q
Sbjct: 121 LLQ 119

[Close]

BLAST of MELO3C010049 vs. TAIR10
Match: AT3G47390.1 (AT3G47390.1 cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.6e-30
Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 1


Query: 3   FSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPNYG 62
           F +  SSP+IC +       + S    S+  ++ ++ FIRRAA++++ SAG T+PHPN+G
Sbjct: 5   FRISSSSPLICRA-------TLSNGDNSRNYHTTDAAFIRRAADLSEMSAGLTSPHPNFG 64

Query: 63  CIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVSAL 122
           C++AT+SG +AGEG+L+ QGTK AE  AVE AGE+ RG TA+LN+E  +C GD  AVSAL
Sbjct: 65  CVIATSSGKVAGEGYLYAQGTKPAEALAVEAAGEFSRGATAYLNMEPGDCHGDHTAVSAL 119

Query: 123 VQ 125
           VQ
Sbjct: 125 VQ 119

[Close]

BLAST of MELO3C010049 vs. TAIR10
Match: AT4G20960.1 (AT4G20960.1 Cytidine/deoxycytidylate deaminase family protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1


Query: 37  ESTFIRRAAEIADKSAGFTAPHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGE 96
           +S ++R+  E+A ++ G T+P+P  GC++    GDI G+GF    G   AEV A+ +AGE
Sbjct: 74  DSFYMRKCVELAKRAIGCTSPNPMVGCVIVK-DGDIVGQGFHPKAGQPHAEVFALRDAGE 133

Query: 97  YCRGGTAFLNLE 109
                TA+++LE
Sbjct: 134 LAENATAYVSLE 144

[Close]

BLAST of MELO3C010049 vs. NCBI nr
Match: gi|659085938|ref|XP_008443687.1| (PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 9.5e-62
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPN 60
           MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPN
Sbjct: 1   MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPN 60

Query: 61  YGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVS 120
           YGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVS
Sbjct: 61  YGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVS 120

Query: 121 ALVQ 125
           ALVQ
Sbjct: 121 ALVQ 124

[Close]

BLAST of MELO3C010049 vs. NCBI nr
Match: gi|700211569|gb|KGN66665.1| (hypothetical protein Csa_1G655930 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-59
Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPN 60
           MIFSLVPSSPIICFSRPAAAAISTST+SLSQ QYSLESTFIRRAAEIADKSAGFTAPHPN
Sbjct: 1   MIFSLVPSSPIICFSRPAAAAISTSTTSLSQSQYSLESTFIRRAAEIADKSAGFTAPHPN 60

Query: 61  YGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVS 120
           YGCIVAT SG +AG+GFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLE SECAGDDIAVS
Sbjct: 61  YGCIVATPSGAVAGQGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLEPSECAGDDIAVS 120

Query: 121 ALVQVRQ 128
           ALVQVRQ
Sbjct: 121 ALVQVRQ 127

[Close]

BLAST of MELO3C010049 vs. NCBI nr
Match: gi|778664102|ref|XP_011660221.1| (PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 8.3e-58
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSRPAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFTAPHPN 60
           MIFSLVPSSPIICFSRPAAAAISTST+SLSQ QYSLESTFIRRAAEIADKSAGFTAPHPN
Sbjct: 1   MIFSLVPSSPIICFSRPAAAAISTSTTSLSQSQYSLESTFIRRAAEIADKSAGFTAPHPN 60

Query: 61  YGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGDDIAVS 120
           YGCIVAT SG +AG+GFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLE SECAGDDIAVS
Sbjct: 61  YGCIVATPSGAVAGQGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLEPSECAGDDIAVS 120

Query: 121 ALVQ 125
           ALVQ
Sbjct: 121 ALVQ 124

[Close]

BLAST of MELO3C010049 vs. NCBI nr
Match: gi|449442795|ref|XP_004139166.1| (PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSR-----PAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFT 60
           M+F+L  S PI+  +R      +AAA +T+ SS S   +  E+TFIRRAAEIADKSAGFT
Sbjct: 1   MVFTLGASFPILHANRLPTAVVSAAATTTNPSSNSSTSHLFEATFIRRAAEIADKSAGFT 60

Query: 61  APHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGD 120
           APHPNYGCI+ T+SG +AGEGFL+GQGT+SAE+QAV+ AGE CRG TAFLNLESS+C  D
Sbjct: 61  APHPNYGCIITTSSGAVAGEGFLYGQGTESAELQAVQAAGERCRGATAFLNLESSDCPSD 120

Query: 121 DIAVSALVQ 125
           + AV+ALVQ
Sbjct: 121 NTAVAALVQ 129

[Close]

BLAST of MELO3C010049 vs. NCBI nr
Match: gi|659085940|ref|XP_008443689.1| (PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-36
Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = 1


Query: 1   MIFSLVPSSPIICFSR-----PAAAAISTSTSSLSQYQYSLESTFIRRAAEIADKSAGFT 60
           M+F+L  S PI+  +R      +AAA +T+ SS S   +  E+TFIRRAAEIADKSAGFT
Sbjct: 1   MVFTLGASLPILHANRLPTPVVSAAATTTNPSSNSSTSHLFEATFIRRAAEIADKSAGFT 60

Query: 61  APHPNYGCIVATASGDIAGEGFLFGQGTKSAEVQAVEEAGEYCRGGTAFLNLESSECAGD 120
           APHPNYGCI+ T+SGD+AGEGFL+GQGT+SAE+QAV+ AGE CRG TAFLNLESS+   D
Sbjct: 61  APHPNYGCIITTSSGDVAGEGFLYGQGTESAELQAVQAAGERCRGATAFLNLESSDSPSD 120

Query: 121 DIAVSALVQ 125
           + AV+ALVQ
Sbjct: 121 NTAVAALVQ 129

The following BLAST results are available for this feature:

BLAST of MELO3C010049 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIBRX_ARATH	2.8e-29	50.82	Riboflavin biosynthesis protein PYRR, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
RIBRX_MAIZE	6.0e-24	49.56	Riboflavin biosynthesis protein PYRR, chloroplastic OS=Zea mays GN=PYRR PE=1 SV=...	[more]
RIBD_MAIZE	2.1e-08	34.62	Riboflavin biosynthesis protein PYRD, chloroplastic OS=Zea mays GN=PYRD PE=2 SV=...	[more]
RIBD_HAEIN	3.5e-08	40.54	Riboflavin biosynthesis protein RibD OS=Haemophilus influenzae (strain ATCC 5190...	[more]
RIBD_ARATH	6.0e-08	38.89	Riboflavin biosynthesis protein PYRD, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]

BLAST of MELO3C010049 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXT0_CUCSA	1.4e-59	94.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G655930 PE=4 SV=1	[more]
A0A0A0M0K4_CUCSA	9.6e-37	64.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G655950 PE=4 SV=1	[more]
M5WQV5_PRUPE	5.6e-29	54.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003150mg PE=4 SV=1	[more]
A0A072U1X8_MEDTR	7.4e-29	53.66	Riboflavin biosynthesis protein RibD OS=Medicago truncatula GN=MTR_7g080117 PE=4...	[more]
A0A072U154_MEDTR	7.4e-29	53.66	Riboflavin biosynthesis protein RibD OS=Medicago truncatula GN=MTR_7g080117 PE=4...	[more]

BLAST of MELO3C010049 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G47390.1	1.6e-30	50.82	cytidine/deoxycytidylate deaminase family protein	[more]
AT4G20960.1	3.4e-09	38.89	Cytidine/deoxycytidylate deaminase family protein	[more]

BLAST of MELO3C010049 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085938\|ref\|XP_008443687.1\|	9.5e-62	100.00	PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Cucumis mel...	[more]
gi\|700211569\|gb\|KGN66665.1\|	2.0e-59	94.49	hypothetical protein Csa_1G655930 [Cucumis sativus]	[more]
gi\|778664102\|ref\|XP_011660221.1\|	8.3e-58	94.35	PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Cucumis sat...	[more]
gi\|449442795\|ref\|XP_004139166.1\|	1.4e-36	64.34	PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic [Cucumis sativus]	[more]
gi\|659085940\|ref\|XP_008443689.1\|	2.4e-36	64.34	PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic-like [Cucumis mel...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016193	Cytidine_deaminase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0046443	FAD metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009231	riboflavin biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity
molecular_function	GO:0008835	diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010049T1	MELO3C010049T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016193	Cytidine deaminase-like	unknown	SSF53927	Cytidine deaminase-like	coord: 38..110 score: 6.7
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 33..109 score: 6.
None	No IPR available	PANTHER	PTHR11079	CYTOSINE DEAMINASE	coord: 35..124 score: 4.2
None	No IPR available	PANTHER	PTHR11079:SF76	SUBFAMILY NOT NAMED	coord: 35..124 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C010049	Csa1G655930	Cucumber (Chinese Long) v2	cumeB043
MELO3C010049	Bhi02G001089	Wax gourd	mewgoB315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010049	Wax gourd	mewgoB300
MELO3C010049	Cucumber (Gy14) v1	cgymeB574
MELO3C010049	Cucurbita maxima (Rimu)	cmameB069
MELO3C010049	Cucurbita maxima (Rimu)	cmameB107
MELO3C010049	Cucurbita moschata (Rifu)	cmomeB061
MELO3C010049	Cucurbita moschata (Rifu)	cmomeB099
MELO3C010049	Wild cucumber (PI 183967)	cpimeB044
MELO3C010049	Watermelon (Charleston Gray)	mewcgB239
MELO3C010049	Watermelon (97103) v1	mewmB263
MELO3C010049	Cucurbita pepo (Zucchini)	cpemeB007
MELO3C010049	Cucurbita pepo (Zucchini)	cpemeB332
MELO3C010049	Bottle gourd (USVL1VR-Ls)	lsimeB398
MELO3C010049	Cucumber (Gy14) v2	cgybmeB040
MELO3C010049	Silver-seed gourd	carmeB0540
MELO3C010049	Silver-seed gourd	carmeB0946
MELO3C010049	Cucumber (Chinese Long) v3	cucmeB044
MELO3C010049	Watermelon (97103) v2	mewmbB244