MELO3C010017 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C010017
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pectin lyase-like superfamily protein
Location	chr2 : 11013333 .. 11021387 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCAAATCTCATTTTATCTACTTCAAAACCCAATGGCCAAAATTTCCAACCATTCATCATTTCACTCACCATTTCAACCAACGATCATCCTCCTAGCCCTCGTAATTCTGATCTCCCATACAATCAGAAGATCGCACTCAGCGAACTTGTTGAACATTTTGGATTTTGGTGCCATACGTGGTTATGATTCGAGCCAAGCCATCCATCGTGCATGGGCAGTGGCCTGCAAGTCCGAAGAATCTACCATTGTCTACATTCCAAAGGGAAGGTTTCTTGTTCAACCAATTGAATTCCATGGTGGAGGATGTCATAATGAAGATATTAGTTTCCATATTGATGGAGCTCTCATCGGGCCTCCTGACTACCGGATCCTTGGTAATGTCGAAAGTTGGCTAAGCTTTGTGGAGGTTAATGGCGTTTCTTTGACTGGTGGAGTTCTTTATGCCAATGGTGAAGCCTTATGGTCTTGTAAATTCTCCACTACCCACTGCCCCGTTGGAGCCCGGGTAACTACTTCTACAACTATCTTTCTTATTCCTTTTGAAACTTTCAATTTTAGGACCTATTCCTTTTTTCAATGGACTTTTTCGAGAAAAAGAAAACAACTATTTACCCTTAGTAAAAAAATTACTAAAAGAAATAAATATTTTGTTAACTTTACTATTATTTACTATTTATTTTTTTTAATCTAAAATAATTTTGGAAGTTTTACATAGCCTTTTTTTTTAAATATAACACAAACAACTAAAAATGAAATAGGCAATAGCTTATCATAATTTATCACAAATTAAGGGTAGGATTTACAATTTATATCTTAAAAGAATACACACCTTTTTTTAATAGAAAAAAAAAGGTCATTTAGTCACACATTTATATTGGGTTAGTTTTTATAAATATAACAAAACGCCAAAATATTTATCACCTATGTAACAAAATCGAAAAATTCATGAAACCGGCCTTTTTTTTAAAATGTTCCAGGTTTACCCTTGTCGCTTTGAATTTCCACAGCGACGATTTCTTCCTTCTTCATTTCCATCTCTTCCTACTCTTCTTCTTCTACACAATTTTTCTTTTATATTTTTTGAAATCATGATCATTGTTCTACAATTATTATTATTCTTTATTTTATATCTTTCTTTTTTTCACTTCTTTAAATTCCCACTTGGTAAACGGTCTTCATCATCTCTCATATATTTGCTCTTCCAGATCTAAACGATCGTGTCCAAAGCTAAACAATTTTTATTCAAGATCGTGTACCAAAGATAAAAGATATTGGTTCAAGATCGTGTACCAAAGGTAAACGATTTTGGCTCAAGATCGTGTACCAAAGGTAAACGATTTTGGCTCAAGATCGTGTACCACCAAATCTAAACGATCTTGGTACACAATCTTGAACCAAGATCATTTAGATAATTTGATACACGATCGTGTTTCATTTCCTACACGATCGCATATCATGATCGTTTAGAAGAAAAATTACACGCGCGCGTGTGGTCAACTAAAAACGTGTTAACTATGACGTTTTTAGTATTTTCTTATTGTGAGTGAATTTTTTCTGTTTTCAAAAGTATTCTATACTGTGTAAATATTTTATCAATTTATTATATTTATTGAAAAAACTACTTTATATTGAGTAAAGTGAGAATTTTGGGACATTACCCAAATACTAATAGTTATTGCTATAAATACTATGTAAATATAATTCACTTTCCGGTACATTTTTTTAAAACAGATAAATATATTCTATATATATTTTTCATAAATCTTATGAGTAGTTTTTAAGGGATCTTAGTATATAAAAATAAGAAAAATTATTGTAAAGGACAAAATTGACAAAAGATATTTACAAAAGATAAGCAAAATTTTAGATTTTATCAATTATAGACAATAACACTAACATACTGTTATCGGCATCTATCAGTGCATTGATAAACGATAGTAAGTTTTTATTTTTGATAAAATATATAATTTTACTATATTTTGTAAATATTTTAATTCATTTTGTTCAATTTTAAAATGTTGTTAATTATTATACAAGGGTTAATGCATTTGAATATATTATTAATTTCGCCATTTTTAAATTTAGTGTAAAATGTACTTTTCCAAAATTATTATGAAAATATTATAATTTCATCGATTGATCCACCTTTTTAGGGGACCTCATCTCTTGATCTTAATGTTATTAAGAAATATAAACACATTCCTCTATCTCTTAGAGAGACAAACTTTGAACAATGTAGGATTAAATGTGTACTTTACAAGCACATGAAACCTAGAAATTATTATTTTTAAATATAATTATCAAAACATGTTTATCATTAGAAAAAAAATCTTCTTTTTATAATGCAGACTCTAAGTTTTAGGGACTCAAATAATATAAGGATAAGGGGATTGATGTCTAGAAATAGCCAACTATTCCATATAGTGATCAATGGATGTAAGAATGTACTAGTGGAAGAAGTCAACGTGATGGCAGCAAGTAATAGTCCGAACACTGATGGCATTCACGTGGAAACATCCACGCATGTGACCATCATTGACTCTACCATTCAAACGGGAGATGATTGTATCTCCATCGGTCCTGGGTCCTATAATATTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGCATTAGGTACTTTTATATCATCAATCTTTCTACTTTCACGGCTATGAATTTTTAGATCATATAAAACAACATACTCTTAATTTATATAATTTATTTTATATTTTATTTTTAGTTATTAAAATTTTAATATTTTTTAGTTCAACCATGTCGAGAATTAGGAGATCAAGTCATCCATCACTTTTAACAACAATGGGATGCTTATTATTATTACTATTATTTTGGATTGTTTAATTCTTTTCTTTTCTTTTTTTTATTATATAATATATAGTAATTTAAGAGGTAATAGTCAAGTTTATAGCAATATTTTTAAAAATTGTAAATATAACAAAGACTATAAACGATAGACTAATATTTGCAATATGAATTTGTCTGCGATAGGTTTATATCATGATAGATTCTAACATATTTTGATATATTTAAAATTTTTCGAAAATGTTTCTACATAAATTAAATATACTTTGAATCTAATTGTTATATTTGCAACTATCTCTAAATCGTTTTTATTATACTATTATTCATAATTATTTTATGTATCGTTTCTTTGTTATATAGAAAATCTAGTAACAAAATATTGAAATATTTCCAAACACAAGAAAAAGACAATATTGCATTAGATGTTTTTTTTAATCATTTTACTATATTAATAAATATATCAATTAGTTGGCTAATTTATTAATCTATGAGATTTTTATTTTTTTTAGGCACTTATGACCAATTTTAAATCTCAATGGTTTAGTGGTCATTATTATTTTACCTTATAAAATGCAAACTCAAATGGTTGGATTTAAGTTCGATCTCATAGAATTTTAAAGTAAATCGCTAGTTTAACCATGCACGATATATTTCTATTTTTTATTAAATAAATCAATATCAAAAGTCAATTTACTAATTTCTTTTTTTCTTTTTTCTTTTTTTCTTTCTCCTTTCACACACACATACATAATTCCTTTCATATATTTCTAGTGAATTCAGAAAATAAAGGGACTTTTAGGGTTTCTTTAAAATAACCGAAGAAAAAAATGTTAAAAAAAATGTACTTCCATTTAAACATGTTATTTTAAAAACTCCTTAATATAAATATACACGCGTTTAGCAACTCGTTTCAAAAATATTTTTAGGGAACAACTTATTTGATTTATCGTTATATACTAAAAATGTTCTAGTTTCAAATTCATGGAGGTTTTGATAGAAGTTGGCTAACAATTATTGAGGATATATGGTGATCGAAGGTGGTTGACAACGGTTACTGTAAAACGGTAACCCAAAATTGACAACATTGGTTGTCACAAGTCAATTGATGGTAGTCACTAAAGAATAGTTGTTGGTAGTTGGGGGGTAATGGTCACCAAAAAACAATTGATGAAAGTTGTCCAACAACGATCATTGAAAAATGATGCACAGAAGTTGACAAACAATGGTCACGGAAAGTTAACTAACACTAGTCGTCGAACAACAGTTGACAAAATTTGGTCAACAACAGTCACCAAAACAAGATCGTAGGTAATTGCCCAACAACTGCTATCAAAAAAATGATCGATGAAAGTTGGTTGACAACAGTCACAAAAAATAGTCAACGAAAATTTACTGGCAATGCTCATCAAAAAATAGTTGACAAAAGTTGGGCAACAACGCACCAAACAGCAGTTGGAAAAAGTTGACAAAAACCGTTCACTAGAAAACGGTGAACAAAAGTTGACTAGCAACTGTCATATAAATAGTCAACGAGTTGCCCGATAATGGTCCCGAACAATAGCCGACAACAGTCACTGAAAAATGGTCATCGGTGGTTGACCAACAACTATTATAAAAACACAGTCAATGAAAGTTGACCAACAACAGTCAATGAAAATGGTTGACCAAAGTTGACCAGCAACTATTCTAAAAATACACTCAATGAAATTGACTAACAATAGTCAATGAAAATGTTCAACCAAAGTTGACCAGCAACTATTATAAAAATACAGTCAATGAAATTGACCAACAATAGTCAATGAAAATGGTTGACCAAAGTTGACCAACAACGATAACCTAAATTTGGTCAACAACAATCATCCAACAACAGTAAAAAAAAGTTGGCTAACAACGATCACTAAATTACGATCAATAAAAGTGGGGTCGAAAATGATCACCGAATACCAATGGTCAATAGTTGTCTAGCTCGAAAAACAATCTAAGAAATTTAATTGGCAGCGGTTAACACAAACAATTGACGAAAATTGAGCGAAAAATAGTTGATGAATGTTGGTTGCCAACGATTACCGAAATATAGTTGTTGGAGGTTTGCCGGTAACGGTTGCGGGAAAATGGTACACGAAAATAACCATCAAGGGTCGACAAAAAAATGGTTGCAAAAAAAAACTATGACTGTAGGTTTGCCGACTACGGTCAATAGTGTTCGTTGGTGTGCCAACGAAAATTGCTAGAAAACGATCATAAAAAAATGTAGTCAAAGTTTGTTGGCAACAATTGTCGAAAAGTGGTCATTGAAAAATGATGACAGGTGGCGTTGAGTTGAAGTTTGGTCACTAAAAGTTGACAGGTGGCGAACATCGAAAAACGTTAGTTGAAGATTGGTCTATGATGGTTTTTGGAGGTTAGTTGACAATGGTTGCCAAAAAAACAATAGATGAAAGTTGATCGTCAAAGATTGATGAAAGCAAAGAAATGGTTATTGGAGGTTCACTGACGATGATCAATGTTAGTAGGTACTTGTGTCTATGATGGTAGCTAGAAAATAATCACTCAAAGTTCAGTTAACGACGATTGTCGAAAAGTGGTCATTGGAGGTTGGCCAACGGGGGTTGAAGGAAAAATGATAAACAAAAACTAGTTGTCGATGATTGGGTGAAAAATGATGGTCAGAGATTCATAGGTGGTGATCATCGAATGTTGACCGATGACAATTGGTAGAGGCGATTGTTGAAGGTTGACTAGCAAAGATAGCCGAAGTTGTGGTGACTAGAGTTTTTCGTACAAATTAGAGAGATTAACCATTAAACACTAAGATTCAATTTTTAAAAAGTTAGTTTTAAATTTTTATTATAAACCACGTTATTTTATAAATTCATTTTTTTAATTACCAAACACGTGCGTTTTTTTCAAAATAGCTAATCTTTTACTTTAATTAATTCAAATACATCCTTTGAATTATTATTTCCATTACGGGTTAGGTCTAAATTTTTTTCATAAAAATGTAATTCAAATATATCTCAAAATAACCAATGTCTGACCTCATGGACAAAAAAAATTTAAATTTTTCTTAATTGTTAAACCGTAATTGTTGAACTATTTAATTAGTCCATAAAAATCATTTTTGTTTCGATTTTTAACTTTCTTTTTTTGGTTGATAATCTTGACACAAATTTTGGTTTCACTCTCAAAAAACCCTATAACCTAACCACCATACATTAGGCATCAAACATTTGTCCTCATCAGCATCTACACATCCTATACATAAAACAAAAGAGATGGGTTTCCTTATGTAAATACTTCATTGTAAAAAGATTTATGATAAATATTTTAATGTGTCCTACTTATTATCTATTTTCTATCCGTATTTTAAAAAATCAAGATAAATTTTATAAATTAAAATATAAATAGTTTTTAATTTTTTTTCTATTTTAATCTTGTATTTAAAAAAATGCAGGTTATTGTAAGAAATTAGAGGAAATATATTTAAATTGAGAAACTAAAAACGAAATAATTACTAAAAAGGGTTTAAAATATTTTTATGAAAATTTTGAAATAAAACAAAATATTTGACTTTTAAAACTAAAATAAAATAAGTTAAAAGGTTTTAGCAACGATTCAAATACAATTTAAACAAAAGTTTTAAGCAATTACCGATTCCTGAATCTTTGAATTATTTTATTTAAAGCTAGATTCCTAAATCTTTGAATTATTTTAATTAAAACTATGAGCTTACTAAATTCTATCCATTAGAATTTTAGACATACATAAGCGTATTAATTTGTACCATTCACATATGATTTCATTTGGATAAAGATCATGTAAGACATATAATTGATTAATTAAACCTCTAAGAATCAATTAAAACACTTGGCTAAGATTTCCTTTGATGTATAATTGTCTATATATTCTGCTAATCCAACCATTAAAGAAATCCATATATGTGTAAAAGTTGATACATCGAGCGATTTTCAAATGAATAAGTCTAATTTGATTCTTTAGTAATAATTTGAGGAGTTTAAGTGAAACCATCATCATATCTATAATTTTAAAGATTAAAATCCTCTGAAAGAAATCTATTTGAAAATTTATAGACAAATGATATTTTCCCCCCGATGTGTTCAGCATAGGAAGCTTAGCACACAACATGAACGAGCCTGGGGTAGGAAACGTCACCGTTTCAAAGGCAATATTTTACGGTACTCAAAATGGGCTGAGAATAAAGTCATGGGCCAGACCCAGCACTGGATTTGTGTACGGAGTCCAATTTCTTGGAGCCACCATGCATAATGTCCAAAACCCAATTCTCATTGACCAACACTACTGCCCCAACAACATAAACTGCCCCGGTCAGGTATAAACCAAATATCTACCCTTTTTTTTAATACAACAATCCTAAAAATTAGGTTCTTCAATTGCTA

mRNA sequence

GAACCAAATCTCATTTTATCTACTTCAAAACCCAATGGCCAAAATTTCCAACCATTCATCATTTCACTCACCATTTCAACCAACGATCATCCTCCTAGCCCTCGTAATTCTGATCTCCCATACAATCAGAAGATCGCACTCAGCGAACTTGTTGAACATTTTGGATTTTGGTGCCATACGTGGTTATGATTCGAGCCAAGCCATCCATCGTGCATGGGCAGTGGCCTGCAAGTCCGAAGAATCTACCATTGTCTACATTCCAAAGGGAAGGTTTCTTGTTCAACCAATTGAATTCCATGGTGGAGGATGTCATAATGAAGATATTAGTTTCCATATTGATGGAGCTCTCATCGGGCCTCCTGACTACCGGATCCTTGGTAATGTCGAAAGTTGGCTAAGCTTTGTGGAGGTTAATGGCGTTTCTTTGACTGGTGGAGTTCTTTATGCCAATGGTGAAGCCTTATGGTCTTGTAAATTCTCCACTACCCACTGCCCCGTTGGAGCCCGGACTCTAAGTTTTAGGGACTCAAATAATATAAGGATAAGGGGATTGATGTCTAGAAATAGCCAACTATTCCATATAGTGATCAATGGATGTAAGAATGTACTAGTGGAAGAAGTCAACGTGATGGCAGCAAGTAATAGTCCGAACACTGATGGCATTCACGTGGAAACATCCACGCATGTGACCATCATTGACTCTACCATTCAAACGGGAGATGATTGTATCTCCATCGGTCCTGGGTCCTATAATATTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGCATTAGCATAGGAAGCTTAGCACACAACATGAACGAGCCTGGGGTAGGAAACGTCACCGTTTCAAAGGCAATATTTTACGGTACTCAAAATGGGCTGAGAATAAAGTCATGGGCCAGACCCAGCACTGGATTTGTGTACGGAGTCCAATTTCTTGGAGCCACCATGCATAATGTCCAAAACCCAATTCTCATTGACCAACACTACTGCCCCAACAACATAAACTGCCCCGGTCAGGTATAAACCAAATATCTACCCTTTTTTTTAATACAACAATCCTAAAAATTAGGTTCTTCAATTGCTA

Coding sequence (CDS)

ATGGCCAAAATTTCCAACCATTCATCATTTCACTCACCATTTCAACCAACGATCATCCTCCTAGCCCTCGTAATTCTGATCTCCCATACAATCAGAAGATCGCACTCAGCGAACTTGTTGAACATTTTGGATTTTGGTGCCATACGTGGTTATGATTCGAGCCAAGCCATCCATCGTGCATGGGCAGTGGCCTGCAAGTCCGAAGAATCTACCATTGTCTACATTCCAAAGGGAAGGTTTCTTGTTCAACCAATTGAATTCCATGGTGGAGGATGTCATAATGAAGATATTAGTTTCCATATTGATGGAGCTCTCATCGGGCCTCCTGACTACCGGATCCTTGGTAATGTCGAAAGTTGGCTAAGCTTTGTGGAGGTTAATGGCGTTTCTTTGACTGGTGGAGTTCTTTATGCCAATGGTGAAGCCTTATGGTCTTGTAAATTCTCCACTACCCACTGCCCCGTTGGAGCCCGGACTCTAAGTTTTAGGGACTCAAATAATATAAGGATAAGGGGATTGATGTCTAGAAATAGCCAACTATTCCATATAGTGATCAATGGATGTAAGAATGTACTAGTGGAAGAAGTCAACGTGATGGCAGCAAGTAATAGTCCGAACACTGATGGCATTCACGTGGAAACATCCACGCATGTGACCATCATTGACTCTACCATTCAAACGGGAGATGATTGTATCTCCATCGGTCCTGGGTCCTATAATATTTGGATTCAACGCATTCGATGTGGACCTGGTCATGGCATTAGCATAGGAAGCTTAGCACACAACATGAACGAGCCTGGGGTAGGAAACGTCACCGTTTCAAAGGCAATATTTTACGGTACTCAAAATGGGCTGAGAATAAAGTCATGGGCCAGACCCAGCACTGGATTTGTGTACGGAGTCCAATTTCTTGGAGCCACCATGCATAATGTCCAAAACCCAATTCTCATTGACCAACACTACTGCCCCAACAACATAAACTGCCCCGGTCAGGTATAA

Protein sequence

MAKISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRGYDSSQAIHRAWAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPNNINCPGQV*

Homology

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BLAST of MELO3C010017 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.6e-89
Identity = 159/282 (56.38%), Postives = 195/282 (69.15%), Query Frame = 1


Query: 52  DSSQAIHRAWAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDY 111
           DS++A   AWA AC S    ++Y+P G F ++ + F  G C N  I+F I G L+ P DY
Sbjct: 42  DSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVF-SGPCKNNAITFRIAGTLVAPSDY 101

Query: 112 RILGNVESWLSFVEVNGVSLTGGVLYANGEALWSCKFSTTH-CPVGARTLSFRDSNNIRI 171
           R++GN  +W+ F  VNGV+++GG+L   G ALW+CK      CP GA TL F DSNNI +
Sbjct: 102 RVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVV 161

Query: 172 RGLMSRNSQLFHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDD 231
            GL S NSQ+FHIVIN  +NV ++ V V  + NSPNTDGIHV+ S+ VTI++S I TGDD
Sbjct: 162 SGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDD 221

Query: 232 CISIGPGSYNIWIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSW 291
           C+SIGPG+ N+WI+ + CGPGHGISIGSL     E GV NVTV    F GTQNGLRIKSW
Sbjct: 222 CVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSW 281

Query: 292 ARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPNNINCPGQV 333
            RPSTGF   + F  ATM NV+NPI+IDQHYCP+N  CPGQV
Sbjct: 282 GRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQV 322

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BLAST of MELO3C010017 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-80
Identity = 162/331 (48.94%), Postives = 203/331 (61.33%), Query Frame = 1


Query: 4   ISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIR--GYDSSQAIHRAW 63
           + N S    P    I+   L+  ++H I      + LN+L +GA      DS++A   AW
Sbjct: 2   VYNTSCLILPLALIILDFTLISSLAHPI-----PSTLNVLSYGAKPDGSKDSTKAFLAAW 61

Query: 64  AVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWL 123
            VAC S   T + +PKGRFLV  + FHG  C    IS  I G+++ P D+RI+ + + W+
Sbjct: 62  DVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWI 121

Query: 124 SFVEVNGVSLTGGVLYANGEALWSCKFSTTH-CPVGARTLSFRDSNNIRIRGLMSRNSQL 183
            F +V  VS+ GG+L A G +LW CK +  H CP GA++L F  SNNI+I GL S NSQ 
Sbjct: 122 WFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQK 181

Query: 184 FHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYN 243
           FHIVI+   NV ++ V V A  NSPNTDGIHVE+S  V I +S I TGDDCISIGPGS N
Sbjct: 182 FHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTN 241

Query: 244 IWIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYG 303
           ++IQ IRCGPGHGISIGSL     E GV NVTVS   F GT NG+RIK+W + S  F   
Sbjct: 242 VFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARN 301

Query: 304 VQFLGATMHNVQNPILIDQHYCPNNINCPGQ 332
           + F    M  V+NPI+IDQHYC +   CP Q
Sbjct: 302 IVFQHINMKMVKNPIIIDQHYCLHK-PCPKQ 326

[Close]

BLAST of MELO3C010017 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.8e-57
Identity = 119/292 (40.75%), Postives = 165/292 (56.51%), Query Frame = 1


Query: 36  SANLLNILDFGAIRGYDSSQAIHRAWAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNE 95
           S ++ N+ D+GA    D SQA+ +AW  AC S+  + V IPKG + +  +   G  C   
Sbjct: 6   SGSVFNVNDYGAKGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGP-CKGS 65

Query: 96  DISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTG-GVLYANGEALWS---CKFSTT 155
            I F IDG +  P D     + + W+SF  ++G++++G G L   G+  W+   C     
Sbjct: 66  KIGFQIDGVVKAPADPSKFKS-DGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCD-KNP 125

Query: 156 HCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVNVMAASNSPNTDGIH 215
           +C   A  L F    +  +R + S NS++FHI +  C+++  + V V A   S NTDGIH
Sbjct: 126 NCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIH 185

Query: 216 VETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIGSLAHNMNEPGVGNV 275
           V  S  VTI ++ I TGDDCISIGPGS N+ I ++ CGPGHGISIGSL    NE  V  +
Sbjct: 186 VGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGI 245

Query: 276 TVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCP 324
           TV    F GT NG+R+K+W     G    + F   TM+NVQNP+++DQ YCP
Sbjct: 246 TVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCP 294

[Close]

BLAST of MELO3C010017 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.6e-50
Identity = 118/305 (38.69%), Postives = 162/305 (53.11%), Query Frame = 1


Query: 22  ALVILISHTIRRSHSANLLNILDFGAIRGYDSSQAIHRAWAVACKSEESTIVYIPKGRFL 81
           ALV+L       S +  + +I  +GA    D S+A+  A+  AC+S   + + IPKG F 
Sbjct: 10  ALVLLFLAHFGESQTG-VFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFT 69

Query: 82  VQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGG-VLYANG 141
           +  ++  G  C +  +   I   L  P D   L  V  WL+  +++  +++GG +L    
Sbjct: 70  MNQVKLEGP-CKSP-LELQIQATLKAPSDPSQL-KVGEWLTVNKLDQFTMSGGGILDGQA 129

Query: 142 EALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVNVMA 201
            A W CK S   C      LSF    N  I+ + + +S+ FH+ +N CKN+     NV A
Sbjct: 130 AAAWECKQSKK-CNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSA 189

Query: 202 ASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIGSLA 261
            +NSPNTDGIHV  S+ V I DS   TGDDCIS+G  +  ++I R+ CGPGHGIS+GSL 
Sbjct: 190 PANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLG 249

Query: 262 HNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQH 321
            N +E  V  V V    F  T NG+RIK+W     G V  V F    + NV NP++IDQ 
Sbjct: 250 GNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQV 309

Query: 322 YCPNN 326
           YCP N
Sbjct: 310 YCPFN 309

[Close]

BLAST of MELO3C010017 vs. Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.7e-50
Identity = 118/304 (38.82%), Postives = 165/304 (54.28%), Query Frame = 1


Query: 36  SANLLNILDFGAIR-GYDSSQAIHRAWAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHN 95
           ++  +N+ DFGA   G D ++A  +AW  AC S  S ++ +PK  +LV+PI F  G C +
Sbjct: 86  ASKTVNVDDFGAKGDGRDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISF-SGPCKS 145

Query: 96  EDISFHIDGALIGPPD---YRILGNVESWLSFVEVNGVSLTGG-VLYANGEALW--SCKF 155
             ++  I G +    D   YR  G    WL F  V  + + GG  +  NG+  W  SCK 
Sbjct: 146 -GLTMQIYGTIEASDDRSDYRKDGR--HWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKT 205

Query: 156 STT-HCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVNVMAASNSPNT 215
           +    C      L+F  S ++ ++ L   N+Q  H+  + C NV    + V A  NSPNT
Sbjct: 206 NKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNT 265

Query: 216 DGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIGSLAHNMNEPG 275
           DGIHV  + ++ I    I TGDDCISI  GS  + +  I CGPGHGISIGSL +  +E  
Sbjct: 266 DGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAH 325

Query: 276 VGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPNNIN 332
           V +V V+ A   GT NG+RIK+W +  +G    ++F    MHNV+NPI+IDQ+YC  +  
Sbjct: 326 VSDVVVNGAKLCGTTNGVRIKTW-QGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKP 384

[Close]

BLAST of MELO3C010017 vs. TrEMBL
Match: U5FYY7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18510g PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.1e-106
Identity = 189/315 (60.00%), Postives = 233/315 (73.97%), Query Frame = 1


Query: 20  LLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPK 79
           LL  + L+S  I  S +  + N+L +GA      DS+QA   AW  AC S  STI+YIPK
Sbjct: 10  LLLFIFLVSLNINISSAKTVYNVLTYGARPNGKTDSTQAFLHAWTAACGSTNSTIIYIPK 69

Query: 80  GRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLY 139
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG L 
Sbjct: 70  GRYLLGSVAFTGGNCKSPDITIRIDGTLIAPEDYRILGLASNWLSFESVSGVSIVGGALD 129

Query: 140 ANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVN 199
           A G  LW CK   ++CP GA TLSF +SNNI+I GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 ARGSPLWDCKSKGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 200 VMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIG 259
           V+AA +SPNTDGIHV+ ST V I++S+I+TGDDCISIGPG+ N+WI+R+RCGPGHGISIG
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGISIG 249

Query: 260 SLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILI 319
           SLA  M+E GV NVTV   IF GT NG RIKSWAR STGF   ++F+GATM NVQNPI+I
Sbjct: 250 SLAKTMDEAGVQNVTVKSTIFTGTTNGFRIKSWARHSTGFAQAIRFIGATMINVQNPIII 309

Query: 320 DQHYCPNNINCPGQV 333
           DQ+YCP+N+NCP +V
Sbjct: 310 DQNYCPHNLNCPNEV 324

[Close]

BLAST of MELO3C010017 vs. TrEMBL
Match: A0A061FXN3_THECC (Pectin lyase-like superfamily protein OS=Theobroma cacao GN=TCM_044713 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.4e-103
Identity = 188/331 (56.80%), Postives = 243/331 (73.41%), Query Frame = 1


Query: 4   ISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAW 63
           +SN     SPFQ  I++L +++ I+     S +    N+L FGA      DS++A   AW
Sbjct: 1   MSNMMKLSSPFQGMILILFVMLGINSA---SAATTKSNVLAFGAKPNGKTDSTKAFLEAW 60

Query: 64  AVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWL 123
             AC S +ST++Y+PKGR+L+  + F G  C +  I+  IDG L+ P DY +LG   SWL
Sbjct: 61  NAACGSADSTMIYVPKGRYLLGSMAFKGD-CKSPQITIRIDGTLVAPGDYSVLGKSASWL 120

Query: 124 SFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLF 183
           SF  V+ VS+ GG L A G ALW+CK S T+CP GA TLSF +SNN+RI GL S NSQ+F
Sbjct: 121 SFEGVSDVSIIGGALDAKGPALWACKTSHTNCPSGATTLSFTNSNNVRINGLTSFNSQMF 180

Query: 184 HIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNI 243
           HIVINGC+NV ++ V ++AA NSPNTDGIHV+ ST+V II+ +I+TGDDCISIGPG+ ++
Sbjct: 181 HIVINGCQNVHIQGVKIIAAGNSPNTDGIHVQLSTNVEIINCSIKTGDDCISIGPGTKSL 240

Query: 244 WIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGV 303
           W++R+ CGPGHGISIGSLA ++ E GV N+TV K IF GTQNGLRIKSWARPS GFV GV
Sbjct: 241 WVERVTCGPGHGISIGSLAKDLKEEGVQNITVRKTIFSGTQNGLRIKSWARPSNGFVQGV 300

Query: 304 QFLGATMHNVQNPILIDQHYCPNNINCPGQV 333
           +F+ + M NVQNPI+IDQ+YCP+N+NCPGQV
Sbjct: 301 RFINSVMRNVQNPIVIDQNYCPHNLNCPGQV 327

[Close]

BLAST of MELO3C010017 vs. TrEMBL
Match: A0A067DFA5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042768mg PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 6.9e-103
Identity = 186/316 (58.86%), Postives = 235/316 (74.37%), Query Frame = 1


Query: 20  LLALVILISHTIRRSHSANLL-NILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIP 79
           L  ++ ++S  +  S++     N+L FGA      DS+QA  +AWA AC S ES  +Y+P
Sbjct: 12  LFIILFILSINLASSYATTTTYNVLSFGAKGNGVTDSTQAFAKAWAAACASTESATLYVP 71

Query: 80  KGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVL 139
           KGR+L+  + F+G  C + DI+F IDG L+ P DYR+LG  ++WLSF  V+GVS+ GG L
Sbjct: 72  KGRYLLGSVAFNGD-CKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSIIGGAL 131

Query: 140 YANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEV 199
            A G +LW+CK S T+CP GA TLSF +SNNIRI GL+S NSQ+FHIVINGCK+V VE V
Sbjct: 132 DAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVINGCKDVHVEGV 191

Query: 200 NVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISI 259
            V+A  NSPNTDGIHV+ S +V I + TI+TGDDCI IGPG+ N+WI+R+ CGPGHGISI
Sbjct: 192 TVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISI 251

Query: 260 GSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPIL 319
           GSLA ++ E GV NVTV K +F GT NG RIKSWARPS GFV GV+F+ A M NVQ PI+
Sbjct: 252 GSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDAVMRNVQFPIV 311

Query: 320 IDQHYCPNNINCPGQV 333
           IDQ+YCP+N+NCPGQV
Sbjct: 312 IDQNYCPHNLNCPGQV 326

[Close]

BLAST of MELO3C010017 vs. TrEMBL
Match: B9HYF5_POPTR (Polygalacturonase family protein OS=Populus trichocarpa GN=POPTR_0010s18500g PE=3 SV=2)

HSP 1 Score: 381.7 bits (979), Expect = 9.0e-103
Identity = 186/316 (58.86%), Postives = 234/316 (74.05%), Query Frame = 1


Query: 20  LLALVILIS-HTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIP 79
           +L  + L+S + I  S +  + N+  +GA      DS+QA   AWA AC S + TI+YIP
Sbjct: 11  ILFFIFLVSLNNINISSAETIYNVQTYGAKPNGKTDSTQAFLDAWAAACGSTDPTIIYIP 70

Query: 80  KGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVL 139
           +GR+L+  + F GG C + DI   IDG LI P DYRILG   +WLSF  V+GVS+ GG L
Sbjct: 71  EGRYLLGSVAFTGGNCKSPDIIVRIDGTLIAPEDYRILGLASNWLSFEGVSGVSIVGGAL 130

Query: 140 YANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEV 199
            A G  LW CK   ++CP GA TLSF +SNNI+I GL+S NSQ+FHIVINGC+NV V+ V
Sbjct: 131 DAKGSPLWDCKSKGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGV 190

Query: 200 NVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISI 259
            V+AA +SPNTDGIHV+ ST V I++S+I+TGDDCISIGPG+ N+WI+R+RCGPGHGISI
Sbjct: 191 RVIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGISI 250

Query: 260 GSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPIL 319
           GSLA +M+E GV NVTV   IF GT NG RIKSWAR STGF   ++F+GATM NVQNPI+
Sbjct: 251 GSLAKSMDEAGVQNVTVKSTIFTGTTNGFRIKSWARHSTGFAQAIRFIGATMINVQNPII 310

Query: 320 IDQHYCPNNINCPGQV 333
           IDQ+YCP+N+NCP +V
Sbjct: 311 IDQNYCPHNLNCPTEV 326

[Close]

BLAST of MELO3C010017 vs. TrEMBL
Match: A0A0D2V8V5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004100 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.5e-102
Identity = 182/314 (57.96%), Postives = 233/314 (74.20%), Query Frame = 1


Query: 21  LALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPKG 80
           + L++     I  + +    N+L+FGA      DS++A   AW  AC S +STI+Y+PKG
Sbjct: 11  ILLILFFMLAINSTSALTKYNVLNFGAKPNGKTDSTKAFLMAWKAACASADSTIIYVPKG 70

Query: 81  RFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLYA 140
           R+L+  + F GG C +  I F IDG L+ P DYR+LG    WLSF  VNGVS+ GG L A
Sbjct: 71  RYLLGSMAFQGG-CKSPQIIFRIDGTLVAPQDYRVLGKSTDWLSFEGVNGVSILGGALDA 130

Query: 141 NGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVNV 200
            G +LW+CK S ++CP GA TLSF +S NIRIR L+S NSQ+FHIVINGC+NV V+ V +
Sbjct: 131 KGPSLWACKASHSNCPSGATTLSFTNSKNIRIRSLLSLNSQMFHIVINGCENVNVQGVRI 190

Query: 201 MAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIGS 260
           +AA NSPNTDGIHV+ S +V II  +I+TGDDCISIGPG+ N+W++++ CGPGHGISIGS
Sbjct: 191 IAAGNSPNTDGIHVQLSKNVNIIKCSIKTGDDCISIGPGTKNLWVEQVTCGPGHGISIGS 250

Query: 261 LAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILID 320
           LA ++ E GV N+T+ K IF GTQNGLRIKSWARPSTGFV GV+F+ + M NVQNPI+ID
Sbjct: 251 LAKDLKEEGVQNITMKKTIFLGTQNGLRIKSWARPSTGFVQGVRFMDSLMVNVQNPIVID 310

Query: 321 QHYCPNNINCPGQV 333
           Q+YCP+N+NCP QV
Sbjct: 311 QNYCPHNLNCPNQV 323

[Close]

BLAST of MELO3C010017 vs. TAIR10
Match: AT1G65570.1 (AT1G65570.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-92
Identity = 162/317 (51.10%), Postives = 216/317 (68.14%), Query Frame = 1


Query: 18  IILLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYI 77
           +  + + I++SH   +  +   LN+L FGA      +S++A   AW  AC  E+S ++Y+
Sbjct: 10  VFSIVITIIMSH-FGQFDARTSLNVLSFGANPNGIVESAKAFSDAWDAACGVEDSVVIYV 69

Query: 78  PKGRFLVQ-PIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGG 137
           PKGR+LV   + F G  C + +I+  IDG LIGP DY +LG  E+W SF  V+ V++ GG
Sbjct: 70  PKGRYLVSGEVRFEGESCKSREITLRIDGTLIGPQDYSLLGKKENWFSFSGVHNVTVLGG 129

Query: 138 VLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVE 197
              A G  LWSCK +  +CP GA TL F DSNN++I+G++S NSQLFHI IN C+N+ +E
Sbjct: 130 SFDAKGSTLWSCKANGYNCPEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIE 189

Query: 198 EVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGI 257
           +V ++A   SPNTDGIH++ ST + + +++I+TGDDCISIGPG+ N+ +  I CGPGHGI
Sbjct: 190 DVRIIAPDESPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCGPGHGI 249

Query: 258 SIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNP 317
           SIGSLA ++ E GV NVTV  A+F  T NGLRIKSW R S GFV  V+FLGA M NV  P
Sbjct: 250 SIGSLAKSIEEQGVENVTVKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYP 309

Query: 318 ILIDQHYCPNNINCPGQ 332
           ILIDQ+YCP + +CP Q
Sbjct: 310 ILIDQNYCPGDSSCPSQ 325

[Close]

BLAST of MELO3C010017 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 335.9 bits (860), Expect = 2.9e-92
Identity = 162/316 (51.27%), Postives = 213/316 (67.41%), Query Frame = 1


Query: 19  ILLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIP 78
           +L+ L+ L+S +   S SA   NIL +GA      DS++A    WA AC S +   + +P
Sbjct: 5   LLIVLLFLLSVS---SSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVP 64

Query: 79  KGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVL 138
           KGRFL++ I F G  C  + ++F I G L+ P DYR++G    W+ F  ++G+S+ GGVL
Sbjct: 65  KGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVL 124

Query: 139 YANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEV 198
            A G +LWSCK S  +CP GA ++ F+ S N+ I GL S NSQ+FH+ INGC NV ++ V
Sbjct: 125 DAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGV 184

Query: 199 NVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISI 258
            V A  NSPNTDGIHV++S+ V+I++S I TGDDC+SIGPG+  +WI+ + CGPGHGISI
Sbjct: 185 KVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISI 244

Query: 259 GSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPIL 318
           GSL     E GV N+TV  A F GT+NG+RIKSWARPS GF   ++F    M+NVQNPI+
Sbjct: 245 GSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIV 304

Query: 319 IDQHYCPNNINCPGQV 333
           IDQ+YCP N NCP QV
Sbjct: 305 IDQNYCPGNENCPNQV 317

[Close]

BLAST of MELO3C010017 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 331.6 bits (849), Expect = 5.4e-91
Identity = 155/315 (49.21%), Postives = 214/315 (67.94%), Query Frame = 1


Query: 20  LLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPK 79
           + +L++L       S SA   N+L FGA      D+++A    W  AC S     + +PK
Sbjct: 1   MASLLVLFVFFFISSCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPK 60

Query: 80  GRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLY 139
           GRFL++ + F G  C  + ++F IDG L+ P DYR++GN + W+ F  ++G+++ GGVL 
Sbjct: 61  GRFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLD 120

Query: 140 ANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVN 199
           A G +LW CK S  +CP GA T+ F+ S+N+ + GL S NSQ+FH+VINGC NV ++ V 
Sbjct: 121 ARGASLWDCKKSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVK 180

Query: 200 VMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIG 259
           V+AA NSPNTDGIHV++S+ V+I ++ I TGDDC+SIGPG+  +WI+ + CGPGHGISIG
Sbjct: 181 VLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIG 240

Query: 260 SLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILI 319
           SL  +  E GV NVTV    F GT NG+RIKSWARPS+GF   ++F    M+NV+NPI+I
Sbjct: 241 SLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIII 300

Query: 320 DQHYCPNNINCPGQV 333
           DQ+YCP++ +CP QV
Sbjct: 301 DQNYCPDH-DCPRQV 314

[Close]

BLAST of MELO3C010017 vs. TAIR10
Match: AT2G43890.1 (AT2G43890.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 311.6 bits (797), Expect = 5.8e-85
Identity = 149/303 (49.17%), Postives = 207/303 (68.32%), Query Frame = 1


Query: 31  IRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPKGRFLVQPIEFH 90
           ++ S +A+  N++ FGA      DS++A   AW  AC+S  +  V +P+G FL++P+EF 
Sbjct: 20  MKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPRGSFLLKPVEFR 79

Query: 91  GGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLYANGEALWSCKF 150
           G  C +  I+F I G ++ P DYR LGN   W+ FV+VN +S+ GG L A G + W+C+ 
Sbjct: 80  GP-CRSR-ITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDARGASFWACRK 139

Query: 151 STTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVNVMAASNSPNTD 210
           S   CPVGAR+++F  +N++ + GL S NSQ  H+VIN C NV+V +V ++A   SPNTD
Sbjct: 140 SGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKLVAPDQSPNTD 199

Query: 211 GIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIGSLAHNMNEPGV 270
           G+HV+ S  VT+ D T  TGDDCISIGPG+ N+++ ++ CGPGHGISIGSL  + NE GV
Sbjct: 200 GLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRDANEAGV 259

Query: 271 GNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPNNINC 330
            N+T+  ++F G+ NG+RIK+WAR STGFV  V F    M NVQNPI++DQ+YCP+N  C
Sbjct: 260 ENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQNYCPSNQGC 319

Query: 331 PGQ 332
           P Q
Sbjct: 320 PKQ 320

[Close]

BLAST of MELO3C010017 vs. TAIR10
Match: AT1G05660.1 (AT1G05660.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-83
Identity = 154/315 (48.89%), Postives = 203/315 (64.44%), Query Frame = 1


Query: 19  ILLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIP 78
           +L  L+  I  +I  S   N+ N++ FGA      DS+ A  +AW  AC S  S  V +P
Sbjct: 10  LLFTLLTFIDVSISAS---NVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVP 69

Query: 79  KGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVL 138
           KG FL++ I F GG C ++ I+F + G +I P DYR  GN   W+ F +VN  SL GG  
Sbjct: 70  KGTFLLKVITF-GGPCKSK-ITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTF 129

Query: 139 YANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEV 198
            A     WSC+ S  +CP G R++SF  + ++ I G+ S NSQ+ H+ +NGC NV+V  V
Sbjct: 130 DARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNV 189

Query: 199 NVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISI 258
            ++A  NSPNTDG HV+ ST VT   ST+QTGDDC++IGPG+ N+ I ++ CGPGHG+SI
Sbjct: 190 KLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSI 249

Query: 259 GSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPIL 318
           GSLA  + E GV NVTVS ++F G+QNG+RIKSWARPS GFV  V F    M NV+NPI+
Sbjct: 250 GSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPII 309

Query: 319 IDQHYCPNNINCPGQ 332
           IDQ+YCP +  CP +
Sbjct: 310 IDQNYCPTHEGCPNE 319

[Close]

BLAST of MELO3C010017 vs. NCBI nr
Match: gi|659085882|ref|XP_008443656.1| (PREDICTED: polygalacturonase [Cucumis melo])

HSP 1 Score: 684.5 bits (1765), Expect = 9.3e-194
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1


Query: 1   MAKISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRGYDSSQAIHRA 60
           MAKISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRGYDSSQAIHRA
Sbjct: 1   MAKISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRGYDSSQAIHRA 60

Query: 61  WAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESW 120
           WAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESW
Sbjct: 61  WAVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESW 120

Query: 121 LSFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQL 180
           LSFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQL
Sbjct: 121 LSFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQL 180

Query: 181 FHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYN 240
           FHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYN
Sbjct: 181 FHIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYN 240

Query: 241 IWIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYG 300
           IWIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYG
Sbjct: 241 IWIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYG 300

Query: 301 VQFLGATMHNVQNPILIDQHYCPNNINCPGQ 332
           VQFLGATMHNVQNPILIDQHYCPNNINCPGQ
Sbjct: 301 VQFLGATMHNVQNPILIDQHYCPNNINCPGQ 331

[Close]

BLAST of MELO3C010017 vs. NCBI nr
Match: gi|566191496|ref|XP_006378626.1| (hypothetical protein POPTR_0010s18510g [Populus trichocarpa])

HSP 1 Score: 392.5 bits (1007), Expect = 7.3e-106
Identity = 189/315 (60.00%), Postives = 233/315 (73.97%), Query Frame = 1


Query: 20  LLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPK 79
           LL  + L+S  I  S +  + N+L +GA      DS+QA   AW  AC S  STI+YIPK
Sbjct: 10  LLLFIFLVSLNINISSAKTVYNVLTYGARPNGKTDSTQAFLHAWTAACGSTNSTIIYIPK 69

Query: 80  GRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLY 139
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG L 
Sbjct: 70  GRYLLGSVAFTGGNCKSPDITIRIDGTLIAPEDYRILGLASNWLSFESVSGVSIVGGALD 129

Query: 140 ANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVN 199
           A G  LW CK   ++CP GA TLSF +SNNI+I GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 ARGSPLWDCKSKGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 200 VMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIG 259
           V+AA +SPNTDGIHV+ ST V I++S+I+TGDDCISIGPG+ N+WI+R+RCGPGHGISIG
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGISIG 249

Query: 260 SLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILI 319
           SLA  M+E GV NVTV   IF GT NG RIKSWAR STGF   ++F+GATM NVQNPI+I
Sbjct: 250 SLAKTMDEAGVQNVTVKSTIFTGTTNGFRIKSWARHSTGFAQAIRFIGATMINVQNPIII 309

Query: 320 DQHYCPNNINCPGQV 333
           DQ+YCP+N+NCP +V
Sbjct: 310 DQNYCPHNLNCPNEV 324

[Close]

BLAST of MELO3C010017 vs. NCBI nr
Match: gi|743801446|ref|XP_011014661.1| (PREDICTED: polygalacturonase-like [Populus euphratica])

HSP 1 Score: 384.4 bits (986), Expect = 2.0e-103
Identity = 185/315 (58.73%), Postives = 230/315 (73.02%), Query Frame = 1


Query: 20  LLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPK 79
           LL  + L+S  +  S +    N+L +GA      DS+QA   AW  AC S + T++YIPK
Sbjct: 10  LLLFIFLVSLNVNISSAKTSYNVLTYGARPNGKTDSTQAFLHAWTAACGSTDPTMIYIPK 69

Query: 80  GRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLY 139
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG L 
Sbjct: 70  GRYLLGSVAFKGGHCKSPDITIRIDGTLIAPEDYRILGRARNWLSFEGVSGVSIVGGALD 129

Query: 140 ANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVN 199
           A G  LW CK   ++CP GA TLSF +SNNI+I+GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 AKGSPLWDCKSKGSNCPAGATTLSFVNSNNIKIKGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 200 VMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIG 259
           V+AA +SPNTDGIHV+ ST V I+DS+I+TGDDCISIGPG+ N+WI+R+ CGPGHGISIG
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMDSSIKTGDDCISIGPGTKNLWIERVGCGPGHGISIG 249

Query: 260 SLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILI 319
           SLA   +E GV NVTV   +F GT NG RIKSWAR S GFV  ++F GATM NVQNPI+I
Sbjct: 250 SLAKTTDERGVQNVTVKNTVFSGTTNGFRIKSWARHSNGFVKAIRFSGATMINVQNPIII 309

Query: 320 DQHYCPNNINCPGQV 333
           DQ+YCP+N+NCP QV
Sbjct: 310 DQNYCPHNLNCPNQV 324

[Close]

BLAST of MELO3C010017 vs. NCBI nr
Match: gi|590568324|ref|XP_007010759.1| (Pectin lyase-like superfamily protein [Theobroma cacao])

HSP 1 Score: 383.6 bits (984), Expect = 3.4e-103
Identity = 188/331 (56.80%), Postives = 243/331 (73.41%), Query Frame = 1


Query: 4   ISNHSSFHSPFQPTIILLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAW 63
           +SN     SPFQ  I++L +++ I+     S +    N+L FGA      DS++A   AW
Sbjct: 1   MSNMMKLSSPFQGMILILFVMLGINSA---SAATTKSNVLAFGAKPNGKTDSTKAFLEAW 60

Query: 64  AVACKSEESTIVYIPKGRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWL 123
             AC S +ST++Y+PKGR+L+  + F G  C +  I+  IDG L+ P DY +LG   SWL
Sbjct: 61  NAACGSADSTMIYVPKGRYLLGSMAFKGD-CKSPQITIRIDGTLVAPGDYSVLGKSASWL 120

Query: 124 SFVEVNGVSLTGGVLYANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLF 183
           SF  V+ VS+ GG L A G ALW+CK S T+CP GA TLSF +SNN+RI GL S NSQ+F
Sbjct: 121 SFEGVSDVSIIGGALDAKGPALWACKTSHTNCPSGATTLSFTNSNNVRINGLTSFNSQMF 180

Query: 184 HIVINGCKNVLVEEVNVMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNI 243
           HIVINGC+NV ++ V ++AA NSPNTDGIHV+ ST+V II+ +I+TGDDCISIGPG+ ++
Sbjct: 181 HIVINGCQNVHIQGVKIIAAGNSPNTDGIHVQLSTNVEIINCSIKTGDDCISIGPGTKSL 240

Query: 244 WIQRIRCGPGHGISIGSLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGV 303
           W++R+ CGPGHGISIGSLA ++ E GV N+TV K IF GTQNGLRIKSWARPS GFV GV
Sbjct: 241 WVERVTCGPGHGISIGSLAKDLKEEGVQNITVRKTIFSGTQNGLRIKSWARPSNGFVQGV 300

Query: 304 QFLGATMHNVQNPILIDQHYCPNNINCPGQV 333
           +F+ + M NVQNPI+IDQ+YCP+N+NCPGQV
Sbjct: 301 RFINSVMRNVQNPIVIDQNYCPHNLNCPGQV 327

[Close]

BLAST of MELO3C010017 vs. NCBI nr
Match: gi|743801846|ref|XP_011015894.1| (PREDICTED: polygalacturonase-like [Populus euphratica])

HSP 1 Score: 382.9 bits (982), Expect = 5.8e-103
Identity = 184/315 (58.41%), Postives = 230/315 (73.02%), Query Frame = 1


Query: 20  LLALVILISHTIRRSHSANLLNILDFGAIRG--YDSSQAIHRAWAVACKSEESTIVYIPK 79
           LL  + L+S  +  S +    N+L +GA      DS+QA   AW  AC S + T++YIPK
Sbjct: 10  LLLFIFLVSLNVNISSAKTSYNVLTYGARPNGKTDSTQAFLHAWTAACGSTDPTMIYIPK 69

Query: 80  GRFLVQPIEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVSLTGGVLY 139
           GR+L+  + F GG C + DI+  IDG LI P DYRILG   +WLSF  V+GVS+ GG L 
Sbjct: 70  GRYLLGSVAFKGGHCKSPDITIRIDGTLIAPEDYRILGRARNWLSFEGVSGVSIVGGALD 129

Query: 140 ANGEALWSCKFSTTHCPVGARTLSFRDSNNIRIRGLMSRNSQLFHIVINGCKNVLVEEVN 199
           A G  LW CK    +CP GA TLSF +SNNI+I+GL+S NSQ+FHIVINGC+NV V+ V 
Sbjct: 130 AKGSPLWGCKSKGRNCPAGATTLSFVNSNNIKIKGLLSLNSQMFHIVINGCQNVQVQGVR 189

Query: 200 VMAASNSPNTDGIHVETSTHVTIIDSTIQTGDDCISIGPGSYNIWIQRIRCGPGHGISIG 259
           V+AA +SPNTDGIHV+ ST V I++S+I+TGDDCISIGPG+ N+WI+R+ CGPGHGISIG
Sbjct: 190 VIAAGDSPNTDGIHVQLSTDVVIMNSSIRTGDDCISIGPGTKNLWIERVGCGPGHGISIG 249

Query: 260 SLAHNMNEPGVGNVTVSKAIFYGTQNGLRIKSWARPSTGFVYGVQFLGATMHNVQNPILI 319
           SLA   +E GV NVTV   +F GT NG RIKSWAR S GFV  ++F+GATM NVQNPI+I
Sbjct: 250 SLAKTTDERGVQNVTVKTTVFSGTTNGFRIKSWARHSNGFVKAIRFIGATMINVQNPIII 309

Query: 320 DQHYCPNNINCPGQV 333
           DQ+YCP+N+NCP QV
Sbjct: 310 DQNYCPHNLNCPNQV 324

The following BLAST results are available for this feature:

BLAST of MELO3C010017 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_PRUPE	1.6e-89	56.38	Polygalacturonase OS=Prunus persica PE=2 SV=1	[more]
PGLR6_ARATH	1.4e-80	48.94	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S...	[more]
PGLR2_PLAAC	2.8e-57	40.75	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR_TOBAC	2.6e-50	38.69	Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1	[more]
PGLR_ACTDE	9.7e-50	38.82	Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1	[more]

BLAST of MELO3C010017 vs. TrEMBL


Match Name	E-value	Identity	Description
U5FYY7_POPTR	5.1e-106	60.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18510g PE=3 SV=1	[more]
A0A061FXN3_THECC	2.4e-103	56.80	Pectin lyase-like superfamily protein OS=Theobroma cacao GN=TCM_044713 PE=3 SV=1	[more]
A0A067DFA5_CITSI	6.9e-103	58.86	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042768mg PE=3 SV=1	[more]
B9HYF5_POPTR	9.0e-103	58.86	Polygalacturonase family protein OS=Populus trichocarpa GN=POPTR_0010s18500g PE=...	[more]
A0A0D2V8V5_GOSRA	1.5e-102	57.96	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004100 PE=3 SV=1	[more]

BLAST of MELO3C010017 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65570.1	2.2e-92	51.10	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	2.9e-92	51.27	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	5.4e-91	49.21	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	5.8e-85	49.17	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	3.2e-83	48.89	Pectin lyase-like superfamily protein	[more]

BLAST of MELO3C010017 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085882\|ref\|XP_008443656.1\|	9.3e-194	100.00	PREDICTED: polygalacturonase [Cucumis melo]	[more]
gi\|566191496\|ref\|XP_006378626.1\|	7.3e-106	60.00	hypothetical protein POPTR_0010s18510g [Populus trichocarpa]	[more]
gi\|743801446\|ref\|XP_011014661.1\|	2.0e-103	58.73	PREDICTED: polygalacturonase-like [Populus euphratica]	[more]
gi\|590568324\|ref\|XP_007010759.1\|	3.4e-103	56.80	Pectin lyase-like superfamily protein [Theobroma cacao]	[more]
gi\|743801846\|ref\|XP_011015894.1\|	5.8e-103	58.41	PREDICTED: polygalacturonase-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010017T1	MELO3C010017T1	mRNA
MELO3C010017T2	MELO3C010017T2	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 65..390 score: 4.0
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 245..258 scor
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 238..258 score: 3600.0coord: 215..236 score: 27.0coord: 268..289 score: 190.0coord: 188..214 score: 240.0coord: 298..319 score: 54
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 27..403 score: 1.57E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 23..402 score: 1.8E
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 18..404 score: 1.9E
None	No IPR available	PANTHER	PTHR31375:SF2	POLYGALACTURONASE/PECTINASE	coord: 18..404 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C010017	Cla97C03G060980	Watermelon (97103) v2	mewmbB244
MELO3C010017	CSPI01G31950	Wild cucumber (PI 183967)	cpimeB044
MELO3C010017	Cucsa.356350	Cucumber (Gy14) v1	cgymeB574
MELO3C010017	CmoCh10G008790	Cucurbita moschata (Rifu)	cmomeB061
MELO3C010017	Lsi06G006700	Bottle gourd (USVL1VR-Ls)	lsimeB398
MELO3C010017	Cp4.1LG18g02390	Cucurbita pepo (Zucchini)	cpemeB332
MELO3C010017	Carg17810	Silver-seed gourd	carmeB0946

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C010017	Silver-seed gourd	carmeB0540
MELO3C010017	Cucumber (Chinese Long) v3	cucmeB044
MELO3C010017	Cucurbita maxima (Rimu)	cmameB069
MELO3C010017	Cucurbita maxima (Rimu)	cmameB107
MELO3C010017	Cucurbita moschata (Rifu)	cmomeB099
MELO3C010017	Cucumber (Chinese Long) v2	cumeB043
MELO3C010017	Watermelon (Charleston Gray)	mewcgB239
MELO3C010017	Watermelon (97103) v1	mewmB263
MELO3C010017	Cucurbita pepo (Zucchini)	cpemeB007
MELO3C010017	Cucumber (Gy14) v2	cgybmeB040