MELO3C009907 (gene) Melon (DHL92) v3.5.1

NameMELO3C009907
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMYB-related transcription factor
Locationchr4 : 27025835 .. 27026287 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTGATCCAATAACTCACAAACCTTTTTCTCAGATCCTCTTTGACTATGGATCTATAAGCAGCCTCCGAACCACACCAAAACCTCTGATGAGTCCCTTCAACAAAACCTTAACTCCAACAACAACAATGGCGAAAACCCAGCAGCCATTTTCTTCAGGAACCAATTTAGGACAGCAATTCCAGTTTCAGACACCAAAAAAACCATACATTTTGAAGGAACAACCGACAAGTTCGTCTTGTTCGTCTTCTTCCATCAATGGTGGTGAAACAGTGTTCCATTTGGCTGGTTCTTCGGAGCAGAGCAATGGGATTGAGCCAATTTTGCAGCGATGTGAAGGGTCTTCTTCTGACTCGTCTTTCGATTCGTTTGTGGATGCTTTGTTGGAGCAGGATTTTGAGATTAAGGGCTCCTTTCCGGAGATCTTGGATGAGTGTTTTGATTATTGA

mRNA sequence

ATGGGAATTGATCCAATAACTCACAAACCTTTTTCTCAGATCCTCTTTGACTATGGATCTATAAGCAGCCTCCGAACCACACCAAAACCTCTGATGAGTCCCTTCAACAAAACCTTAACTCCAACAACAACAATGGCGAAAACCCAGCAGCCATTTTCTTCAGGAACCAATTTAGGACAGCAATTCCAGTTTCAGACACCAAAAAAACCATACATTTTGAAGGAACAACCGACAAGTTCGTCTTGTTCGTCTTCTTCCATCAATGGTGGTGAAACAGTGTTCCATTTGGCTGGTTCTTCGGAGCAGAGCAATGGGATTGAGCCAATTTTGCAGCGATGTGAAGGGTCTTCTTCTGACTCGTCTTTCGATTCGTTTGTGGATGCTTTGTTGGAGCAGGATTTTGAGATTAAGGGCTCCTTTCCGGAGATCTTGGATGAGTGTTTTGATTATTGA

Coding sequence (CDS)

ATGGGAATTGATCCAATAACTCACAAACCTTTTTCTCAGATCCTCTTTGACTATGGATCTATAAGCAGCCTCCGAACCACACCAAAACCTCTGATGAGTCCCTTCAACAAAACCTTAACTCCAACAACAACAATGGCGAAAACCCAGCAGCCATTTTCTTCAGGAACCAATTTAGGACAGCAATTCCAGTTTCAGACACCAAAAAAACCATACATTTTGAAGGAACAACCGACAAGTTCGTCTTGTTCGTCTTCTTCCATCAATGGTGGTGAAACAGTGTTCCATTTGGCTGGTTCTTCGGAGCAGAGCAATGGGATTGAGCCAATTTTGCAGCGATGTGAAGGGTCTTCTTCTGACTCGTCTTTCGATTCGTTTGTGGATGCTTTGTTGGAGCAGGATTTTGAGATTAAGGGCTCCTTTCCGGAGATCTTGGATGAGTGTTTTGATTATTGA

Protein sequence

MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQQFQFQTPKKPYILKEQPTSSSCSSSSINGGETVFHLAGSSEQSNGIEPILQRCEGSSSDSSFDSFVDALLEQDFEIKGSFPEILDECFDY*
BLAST of MELO3C009907 vs. TrEMBL
Match: A0A022R5M1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022965mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-08
Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMA----KTQQPFSSGT 60
           MGIDP+THKPFSQ+  +YG IS          +PF K  +  T+M     + Q  FSS +
Sbjct: 119 MGIDPVTHKPFSQVFSEYGKISCFPINTNTNKNPFLKPESNNTSMGYDIMQRQPYFSSSS 178

Query: 61  N------LGQQF-----QFQT-PKKPYILKEQPTSSSCSSSSINGGETVF---HLAGSSE 120
           N      LGQ       Q Q+ P  P+ L  +       SSS      V    H+  +S 
Sbjct: 179 NGVMRFGLGQSHTCGPSQVQSVPASPFELSNECVLGDYLSSSNYEAAQVQEEGHIRKTSV 238

Query: 121 QSNGIEPILQRCEG---SSSDSSFDSFVDALLEQDFEIKGSFPEILDECFDY 151
           +++G         G   SSS ++  SFV+A+L  D E++  F +ILD+ + Y
Sbjct: 239 ENSGNYSCHGNYSGASSSSSFAADSSFVEAILAHDSEMRLQFLDILDDDYGY 290

BLAST of MELO3C009907 vs. TrEMBL
Match: A0A0K9R493_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108350 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-07
Identity = 45/116 (38.79%), Postives = 63/116 (54.31%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQ 60
           MGIDP+THKP S+IL DY SIS L    +       ++L    T + +Q   S   N   
Sbjct: 119 MGIDPVTHKPISKILSDYESISCLSNNHQ------MRSLDQNLTNSFSQCRISPTDNPET 178

Query: 61  QFQFQTPKKPYILKE-QPTSSSCSSSSINGGETVFHL-----AGSSEQSNGIEPIL 111
           QFQ  T    Y+L+E  P+SSS S++SI+ G+T  HL     A S    + ++P+L
Sbjct: 179 QFQDVTSFNHYVLEEISPSSSSSSTTSISNGQTSSHLLVSGAAYSWGHKSSVDPLL 228

BLAST of MELO3C009907 vs. TrEMBL
Match: A0A0J8CU76_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040770 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-07
Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQ 60
           MGIDP+THKP S+ L DY SIS L T  +  +   ++TL  T+  +  Q    S  N+G+
Sbjct: 119 MGIDPVTHKPISKCLSDYESISCLTTNHQ--IRSLDQTLA-TSFSSHCQISTQSTANMGR 178

Query: 61  -----QFQFQTPKKPYILKE-QPTSSSCSSSSINGGETVFHLA-----GSSEQSNGIEPI 111
                QFQ  T    YIL++  P+SSS SSSSI+ G++  HL+       +E+ +  +P+
Sbjct: 179 LPLMDQFQDVTSFNYYILEDISPSSSSSSSSSISNGKSSSHLSVPGAYSWAEKRSSTDPL 236

BLAST of MELO3C009907 vs. TrEMBL
Match: A0A0J8CU76_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040770 PE=4 SV=1)

HSP 1 Score: 29.3 bits (64), Expect = 5.2e+03
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 1

Query: 120 SSFDSFVDALLEQDFEIKGSFP---EILD 146
           SS +SFV ALL++D EI+  FP   EILD
Sbjct: 302 SSVNSFVKALLDRDSEIQLDFPAFNEILD 330


HSP 2 Score: 59.3 bits (142), Expect = 4.6e-06
Identity = 52/190 (27.37%), Postives = 78/190 (41.05%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQ-QPFSSGTNLG 60
           MGIDPITHKPFSQ+  +YG IS    T     +PF +T T        + Q     T+  
Sbjct: 119 MGIDPITHKPFSQLFSEYGRISGSPITRN--RNPFLQTQTGRWVQGNNEPQKIDHFTSYD 178

Query: 61  QQFQFQTPKKPYILKEQPTSSSCSSSSINGGETVFHLAGSSEQSNG----------IEPI 120
             F  +   +P +  E  +S+S S++++      F  + S E S             E  
Sbjct: 179 VVFAQENVVQPCVFNEASSSASASAAAL------FSSSFSCEASRAPTVPASPFSCNEEY 238

Query: 121 LQRCEGSSS-----------------------------DSSFDSFVDALLEQDFEIKGSF 151
           +  C+                                 +S+ D+FV+ +L +D EI+  F
Sbjct: 239 IVECKNVEMLGLGLGNEGVALQEDGNLVSENEVCVDKSESAADTFVEDMLARDMEIRLQF 298

BLAST of MELO3C009907 vs. TrEMBL
Match: F6HV52_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02180 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-06
Identity = 39/92 (42.39%), Postives = 50/92 (54.35%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAK--TQQPFSSGTNL 60
           MGIDP+THKPFSQIL DYG+IS L  T    M  F++ L   +      +    +    L
Sbjct: 119 MGIDPVTHKPFSQILTDYGNISGLPNT-ATRMGSFSRGLNNASVSVSGLSYTNMNDLKPL 178

Query: 61  GQQFQF--QTPKKPYILKEQPTSSSCSSSSIN 89
            +QFQ   Q   +P+   E P+SSS SSS  N
Sbjct: 179 VEQFQVLNQETVQPHFFSEVPSSSSSSSSCSN 209

BLAST of MELO3C009907 vs. TAIR10
Match: AT3G28470.1 (AT3G28470.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 57/202 (28.22%), Postives = 84/202 (41.58%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSIS-----SLRTTP--KPLMSPFNKT--LTPTTTMAKTQQP 60
           MGIDP+THKP SQ+L ++ +IS     S +T P    +++  N    +   TT       
Sbjct: 119 MGIDPVTHKPVSQLLAEFRNISGHGNASFKTEPSNNSILTQSNSAWEMMRNTTTNHESYY 178

Query: 61  FSSGTNLGQQFQFQTPKKPYILKEQP------TSSSCSSSSINGGET------------- 120
            +S        ++QT   P+     P      T+SSCSSSS +   T             
Sbjct: 179 TNSPMMFTNSSEYQT--TPFHFYSHPNHLLNGTTSSCSSSSSSTSITQPNQVPQTPVTNF 238

Query: 121 ----------VFHLAGSSEQSN------------GIEPILQRCEGSSSDS--SFDSFVDA 151
                     V  + GSS  S+              E I Q  +  +S +  S  SFVD 
Sbjct: 239 YWSDFLLSDPVPQVVGSSATSDLTFTQNEHHFNIEAEYISQNIDSKASGTCHSASSFVDE 298

BLAST of MELO3C009907 vs. NCBI nr
Match: gi|659085492|ref|XP_008443447.1| (PREDICTED: myb-related protein Zm38 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 4.1e-80
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQ 60
           MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQ
Sbjct: 119 MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQ 178

Query: 61  QFQFQTPKKPYILKEQPTSSSCSSSSINGGETVFHLAGSSEQSNGIEPILQRCEGSSSDS 120
           QFQFQTPKKPYILKEQPTSSSCSSSSINGGETVFHLAGSSEQSNGIEPILQRCEGSSSDS
Sbjct: 179 QFQFQTPKKPYILKEQPTSSSCSSSSINGGETVFHLAGSSEQSNGIEPILQRCEGSSSDS 238

Query: 121 SFDSFVDALLEQDFEIKGSFPEILDECFDY 151
           SFDSFVDALLEQDFEIKGSFPEILDECFDY
Sbjct: 239 SFDSFVDALLEQDFEIKGSFPEILDECFDY 268

BLAST of MELO3C009907 vs. NCBI nr
Match: gi|449459506|ref|XP_004147487.1| (PREDICTED: myb-related protein Zm38 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 3.7e-73
Identity = 137/150 (91.33%), Postives = 142/150 (94.67%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMAKTQQPFSSGTNLGQ 60
           MGIDPITHKPFSQILFDYGSISSL+TTPKPLM PFNKTLTPTTTMAK+QQPFSSGTN+G+
Sbjct: 119 MGIDPITHKPFSQILFDYGSISSLQTTPKPLMGPFNKTLTPTTTMAKSQQPFSSGTNMGE 178

Query: 61  QFQFQTPKKPYILKEQPTSSSCSSSSINGGETVFHLAGSSEQSNGIEPILQRCEGSSSDS 120
           QFQFQTPKKPYILKEQPTSSSCSSSSING ET+FHL  SS  SNGIEP LQRCEGSSSD 
Sbjct: 179 QFQFQTPKKPYILKEQPTSSSCSSSSINGSETMFHLGSSSGHSNGIEPNLQRCEGSSSDP 238

Query: 121 SFDSFVDALLEQDFEIKGSFPEILDECFDY 151
           SFDSFVDALLEQDFEIKGSFPEILDECFDY
Sbjct: 239 SFDSFVDALLEQDFEIKGSFPEILDECFDY 268

BLAST of MELO3C009907 vs. NCBI nr
Match: gi|1012260497|ref|XP_015945972.1| (PREDICTED: transcription factor MYB35 [Arachis duranensis])

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10
Identity = 57/188 (30.32%), Postives = 85/188 (45.21%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTP---KPLMSPFNKTLTPTTTMAKTQQPF----- 60
           MGIDP+THKP SQ+L D GSI+ L +T    +P      +T    T   + Q  +     
Sbjct: 119 MGIDPVTHKPVSQVLSDLGSINGLPSTGNQIEPSNPMVEQTQEEQTQFWENQVQYQQVLA 178

Query: 61  ----------------SSGTNLGQQFQFQTPKKPYILKEQPTSSSCSSSS-----INGGE 120
                           SS ++     Q  +P++ Y       +  CSSS      ++G  
Sbjct: 179 SECVQPNVVFSEAASSSSSSSSSNLTQLSSPQQSYNCHNSQITPPCSSSFDWSDFLHGDS 238

Query: 121 TVF---------HLAGSSEQSNGIEPILQRCEGSSSDSSFDSFVDALLEQDFEIKGSFPE 151
            ++          +  SSE    +      CEG S+  S DSFVD +L++D EI+ +FPE
Sbjct: 239 IMWSEMQQCDPQRVMSSSEAFGAVACGASMCEGRSN--SGDSFVDGILDRDSEIRAAFPE 298

BLAST of MELO3C009907 vs. NCBI nr
Match: gi|1021575482|ref|XP_016178964.1| (PREDICTED: transcription factor MYB35 [Arachis ipaensis])

HSP 1 Score: 73.6 bits (179), Expect = 3.4e-10
Identity = 56/187 (29.95%), Postives = 85/187 (45.45%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTT------PKPLMSPF------------------N 60
           MGIDP+THKP SQ+L D GSI+ L +T        P++                     +
Sbjct: 119 MGIDPVTHKPVSQVLSDLGSINGLPSTGNQIEPSNPMVEQTQEEQAQFWENQVQYQVLAS 178

Query: 61  KTLTPTTTMAKTQQPFSSGTNLGQQFQFQTPKKPYILKEQ---PTSSSCSSSSINGGETV 120
           + + P    ++     SS ++     Q  +P++ Y        P SSS   S    G+++
Sbjct: 179 ECVQPNVVFSEAASSSSSSSS-SNLTQLSSPQQSYNCHNSQITPCSSSFDWSDFLHGDSI 238

Query: 121 F----------HLAGSSEQSNGIEPILQRCEGSSSDSSFDSFVDALLEQDFEIKGSFPEI 151
                       +  SSE    +      CEG S+  S DSFVD +L++D EI+ +FPE+
Sbjct: 239 MWSEMQQCDPQRVMSSSEAFGAVACGASMCEGRSN--SGDSFVDGILDRDSEIRAAFPEL 298

BLAST of MELO3C009907 vs. NCBI nr
Match: gi|848881990|ref|XP_012841337.1| (PREDICTED: myb-related protein 308 [Erythranthe guttata])

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-08
Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 1

Query: 1   MGIDPITHKPFSQILFDYGSISSLRTTPKPLMSPFNKTLTPTTTMA----KTQQPFSSGT 60
           MGIDP+THKPFSQ+  +YG IS          +PF K  +  T+M     + Q  FSS +
Sbjct: 119 MGIDPVTHKPFSQVFSEYGKISCFPINTNTNKNPFLKPESNNTSMGYDIMQRQPYFSSSS 178

Query: 61  N------LGQQF-----QFQT-PKKPYILKEQPTSSSCSSSSINGGETVF---HLAGSSE 120
           N      LGQ       Q Q+ P  P+ L  +       SSS      V    H+  +S 
Sbjct: 179 NGVMRFGLGQSHTCGPSQVQSVPASPFELSNECVLGDYLSSSNYEAAQVQEEGHIRKTSV 238

Query: 121 QSNGIEPILQRCEG---SSSDSSFDSFVDALLEQDFEIKGSFPEILDECFDY 151
           +++G         G   SSS ++  SFV+A+L  D E++  F +ILD+ + Y
Sbjct: 239 ENSGNYSCHGNYSGASSSSSFAADSSFVEAILAHDSEMRLQFLDILDDDYGY 290

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A022R5M1_ERYGU5.0e-0833.14Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022965mg PE=4 SV=1[more]
A0A0K9R493_SPIOL1.9e-0738.79Uncharacterized protein OS=Spinacia oleracea GN=SOVF_108350 PE=4 SV=1[more]
A0A0J8CU76_BETVU3.2e-0738.84Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040770 PE=4 S... [more]
A0A0J8CU76_BETVU5.2e+0358.62Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040770 PE=4 S... [more]
F6HV52_VITVI7.9e-0642.39Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g02180 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G28470.11.4e-0628.22 Duplicated homeodomain-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659085492|ref|XP_008443447.1|4.1e-80100.00PREDICTED: myb-related protein Zm38 [Cucumis melo][more]
gi|449459506|ref|XP_004147487.1|3.7e-7391.33PREDICTED: myb-related protein Zm38 [Cucumis sativus][more]
gi|1012260497|ref|XP_015945972.1|1.2e-1030.32PREDICTED: transcription factor MYB35 [Arachis duranensis][more]
gi|1021575482|ref|XP_016178964.1|3.4e-1029.95PREDICTED: transcription factor MYB35 [Arachis ipaensis][more]
gi|848881990|ref|XP_012841337.1|7.1e-0833.14PREDICTED: myb-related protein 308 [Erythranthe guttata][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0048658 anther wall tapetum development
biological_process GO:0055046 microgametogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000785 chromatin
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0016746 transferase activity, transferring acyl groups

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009907T1MELO3C009907T1mRNA


The following gene(s) are paralogous to this gene:

None