MELO3C008981.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008981.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Ribosomal protein L37, mitochondrial
Location	chr08 : 21794908 .. 21797510 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAGCCCACTACCAAGTACCAGCCACCTTCATCTCCATTCCCCATCCCTCCATCTCTTTCATCTCGCATTTCTCCTCTCGCATATCCTCTTTTGTTCCCTCTTCTTCCATCTCTTCGATCTCCACCGCCACGCCGGCCAATATCAATCATCTCCTCTTCTTCCATCTCTCAGGACACTTCCCAATATCAATCCTTCCCAACATCAATCCCAAATCAAACTAGCACAAGGCATGAACTTGAAGAAATGAAAAATTGAAAGATCATAAAATTTCAATCTTACGAACTTGAAGAGGAAAGGGGAAAAACTCTAGCAGGCGTAGGAGAGCTGACTACGGAGGCAGGCGAGAGGTTAGTATTGACGCACGATGCTGGAAGTTTGAAAAATTTACTGAAATTAGGGCTGGGTATAGTCTTATTAGGGAAATTATAATGAATCAGAATAGGTTGGGGTTTCATTTGTGCCAATTTATTGTATAGAATGAATTTTCTTTTCTTAGGCTCAAACCATGAATTTAGGGCTTTGAGAAAGAAAGATATAATTTGAGTTGAATATTGAAAGTTCTCTAGAACTGGATTAAGCGTGATCCAATTTGTAATACAAAAATTCTTACATTTCCAAAGTTAAGGAAATAAAAAGAAAACAACTTCGATCAAATACCAAAAAATTAAGGGAAAAAAAAACGAAAACCGATTTCGAAACTGAGCTTATATTCGATTCGGTTCGAGCTGCACAACGGTGCGGTTTGGTTTTGCATACAATTTCTTTTTTAATTTTCAGTTCGGTTTGGGAAACCGTGTCCACCCCTATCGATTGGGGTCGCTGGCTGTGGATCCTGCTTTTGTACGGGTGTTGGGGGAAATGGGAACGCTGGGTAGTATTTAAGGATCTTTTGTGTTAGAATTAGTTGTCTTGAATTTTGTGATAGAACTGTAGTTCTTGGGAGGAGAGAGTTAGAGACCACTCCTCTTATTTGGCTGGGTTTAATGTGCTCTTTTGTTAGTTATTTTCTATCAAAAACATTCCCCTGTTCTGTTCATTTGTGTTCTTTTATTAGTTGTGTTGCCTGTTGCCTTGCAGTTTGGAAAACACTTTGGCACCAAATAGTTCGTCGAGTAATTTATCCACAATTGGAATTGGGTACTTGTTAGGAATAATGGGCTTGATTAAAACCCCTACAATCTCAACACCAGCTTCATCTTTCTTTCACGAATTAAAATTTTGATCTCATCTTGGCTTGGTTAAAATCCTTACTTGGCTGGATTGTACTAGTTAATTAACATTTCACGAATTAAGCTTTTGATCTAATCTTTTGGAAATTGAGGATGTCTGAAGCATTCTCTGGACCAGTTGTTCAATTGTATGGTCACAACTCCTACATGTTTGCAGTTTCCTTGGTTTTGAATATCATCGCATGCTGTTGGACAACTGTAATATATTGTTGGTCACATTTCCAATGGTGCTTGTTCAAATGCCCTGTGGGGTAAGTTTGAATTTGCCGCTTCTACCACTACATCAATATATTTATCTCACTTCTGTGGTTAGGAATCTGTCGGTGAGGGAGATTCTCAAAAATCAAACTAGGTGTACATTAGAGGGATTGGATGTCTAAGCAGTAAGCGATGCTTGTTGAATTATCTGATTGAAACATACCTACCGTTCTATGTTTCTAAAGACGGATTTTTCCTTATTGTATAAACTAGAATAAATACTAGTCTTCATTTGTAAACAAGCAGGTTCTTAATAATTAAAATTTTGTTTGCTCTTTGTTTGCACCCCATATTGTTTAATCATCATTTGATCCTAGTTTTATCTGTGAAAGTAGGAACTTCATCGCATACCAAGTTGGCCGGTGAATTATTTCATCAGAATTAATAATTCTGAATGTTTGTTTCTGTTTTGCAGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTACGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAACAATATAGTAGAGGCAGACTTTGTTTTTGTTTCTTTTGTGAATGTAATGCAACTCTTTGTCAAACTTTGTATCAATGTGCAAGTCCCGACTTGCATTCTCTCCCTTTTAGTTACTGTCTGTTTTCCAAGTCCATTTTAATGTACTAATTTCAGATGAAATTCGACAAGTTCGGCTTAATTTGAAAGCCAATCTTGTTATATTTCTTTTGCTTTTGCAGTAAAAATGAGAGTTGGAGAGTTAAGTCAATCTTGTTATATTTCATTTGAATGCATGAATGTCCCCT

mRNA sequence

CTTAAGCCCACTACCAAGTACCAGCCACCTTCATCTCCATTCCCCATCCCTCCATCTCTTTCATCTCGCATTTCTCCTCTCGCATATCCTCTTTTGTTCCCTCTTCTTCCATCTCTTCGATCTCCACCGCCACGCCGGCCAATATCAATCATCTCCTCTTCTTCCATCTCTCAGGACACTTCCCAATATCAATCCTTCCCAACATCAATCCCAAATCAAACTAGCACAAGGCATGAACTTGAAGAAATGAAAAATTGAAAGATCATAAAATTTCAATCTTACGAACTTGAAGAGGAAAGGGGAAAAACTCTAGCAGGCGTAGGAGAGCTGACTACGGAGGCAGGCGAGAGTTTCCTTGGTTTTGAATATCATCGCATGCTGTTGGACAACTGTAATATATTGTTGGTCACATTTCCAATGGTGCTTGTTCAAATGCCCTGTGGGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTACGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAACAATATAGTAGAGGCAGACTTTGTTTTTGTTTCTTTTGTGAATGTAATGCAACTCTTTGTCAAACTTTGTATCAATGTGCAAGTCCCGACTTGCATTCTCTCCCTTTTAGTTACTGTCTGTTTTCCAAGTCCATTTTAATGTACTAATTTCAGATGAAATTCGACAAGTTCGGCTTAATTTGAAAGCCAATCTTGTTATATTTCTTTTGCTTTTGCAGTAAAAATGAGAGTTGGAGAGTTAAGTCAATCTTGTTATATTTCATTTGAATGCATGAATGTCCCCT

Coding sequence (CDS)

ATGCTGTTGGACAACTGTAATATATTGTTGGTCACATTTCCAATGGTGCTTGTTCAAATGCCCTGTGGGAAAAAGAAAAAAATGGGTTTGAGCCAAATTAGATTTTTTAGAAGGAACATTATTGTCAGTAGCAAAGATCTAATACAACTGACGTCGGTACGATCATTTGCTGCCGGGGGAAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAGTCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTATGGCAGACTCAGAATACCCTGCTTGGCTGTGGCATTTGCTTGATAAGCATCCACCTCTAAGTGAATTACGAAGGAAGAATGCTGAAAGTCTTCCTTATGCAGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAA

Protein sequence

MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK

Homology

[Close]

BLAST of MELO3C008981.2 vs. NCBI nr
Match: XP_016899597.1 (PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 7.6e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGG 60
           MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGG
Sbjct: 1   MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGG 60

Query: 61  KSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKH 120
           KSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKH
Sbjct: 61  KSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKH 120

Query: 121 PPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK 161
           PPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Sbjct: 121 PPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK 160

[Close]

BLAST of MELO3C008981.2 vs. NCBI nr
Match: XP_008442187.1 (PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 7.7e-65
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 148 RARIKENNSIKAK 161
           RARIKENNSIKAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]

BLAST of MELO3C008981.2 vs. NCBI nr
Match: XP_004144674.2 (PREDICTED: 39S ribosomal protein L54, mitochondrial-like [Cucumis sativus] >KGN54845.1 hypothetical protein Csa_4G539610 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 9.7e-60
Identity = 122/131 (93.13%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 30  LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 89
           +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV
Sbjct: 1   MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 60

Query: 90  VGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRA 149
           VGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRKNAESLPYADL+RF+KLDTRA
Sbjct: 61  VGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRA 120

Query: 150 RIKENNSIKAK 161
           RIKENNSIKAK
Sbjct: 121 RIKENNSIKAK 131

[Close]

BLAST of MELO3C008981.2 vs. NCBI nr
Match: XP_022989738.1 (54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 107/133 (80.45%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87
           M +SQIR FRR+++ ++KDLI+LT+VR+FAAGGK KKGSKGGAA DAPKASILSKEVKST
Sbjct: 1   MAMSQIRLFRRSLL-NTKDLIKLTNVRTFAAGGK-KKGSKGGAATDAPKASILSKEVKST 60

Query: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147
           TVVGANILKEGADPK+MADSEYP WLW L+DK P LSELRRK+A++LPY DL+RFVKLDT
Sbjct: 61  TVVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYEDLKRFVKLDT 120

Query: 148 RARIKENNSIKAK 161
           RARIKENNS KAK
Sbjct: 121 RARIKENNSSKAK 131

[Close]

BLAST of MELO3C008981.2 vs. NCBI nr
Match: XP_022154133.1 (54S ribosomal protein L37, mitochondrial-like [Momordica charantia])

HSP 1 Score: 199.9 bits (507), Expect = 6.5e-48
Identity = 105/133 (78.95%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87
           M +SQ R FR   I+++KD I++TSVR+FAAGGK KKGSKGGAAAD PKASILSKEVKS+
Sbjct: 1   MAMSQSRLFRS--IINAKDAIKVTSVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSS 60

Query: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147
           TVVGANILKEGADPK+MADSEYP WLW L+DKHP LSELRRKN E+LPY DL+RFVKLD 
Sbjct: 61  TVVGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKRFVKLDN 120

Query: 148 RARIKENNSIKAK 161
           RA IKENNSIKAK
Sbjct: 121 RASIKENNSIKAK 130

[Close]

BLAST of MELO3C008981.2 vs. TAIR10
Match: AT3G01740.1 (Mitochondrial ribosomal protein L37)

HSP 1 Score: 146.4 bits (368), Expect = 1.6e-35
Identity = 69/88 (78.41%), Postives = 78/88 (88.64%), Query Frame = 0


Query: 73  DAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAE 132
           DAPK S L+KE+KSTTVVGAN LK+G+DPKI+ DS+YP WLWHLLDK P LSELRRKN E
Sbjct: 38  DAPKGSSLTKEIKSTTVVGANTLKDGSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVE 97

Query: 133 SLPYADLRRFVKLDTRARIKENNSIKAK 161
           +LPY DL+RFVKLDTR +IKENNSIKAK
Sbjct: 98  TLPYDDLKRFVKLDTRGKIKENNSIKAK 125

[Close]

BLAST of MELO3C008981.2 vs. TAIR10
Match: AT5G14290.1 (Mitochondrial ribosomal protein L37)

HSP 1 Score: 145.2 bits (365), Expect = 3.5e-35
Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 30  LSQIRFFRRNIIVSSKDLIQLTSVRSFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTT 89
           ++ IR F  + I  SKD+++    R+FA A GK+KK  +G    DAPKAS LSKE+KS+ 
Sbjct: 1   MNLIRMF-GDSISRSKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLSKEIKSSM 60

Query: 90  VVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTR 149
           VV AN LK+G DPKI+ +S++P +LWHLLDK P LSELRRKN E+L + DL+RFVKLDTR
Sbjct: 61  VVSANTLKDGLDPKILPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTR 120

Query: 150 ARIKENNSIKAK 161
           ARIKEN+SIKAK
Sbjct: 121 ARIKENHSIKAK 131

[Close]

BLAST of MELO3C008981.2 vs. Swiss-Prot
Match: sp|Q9CPW3|RM54_MOUSE (39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-05
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 64  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPAWLWHLLDKHP 123
           KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+  ++  P
Sbjct: 42  KGGKGGVAAEALKDPEVCTDPTQLTTHAMGVNIYKEGQDVALKADSEYPTWLFQ-VNLGP 101

Query: 124 PLSELRRKNAESLPYADLRRFVKLDTRARIKENNSI 158
           P  +L     ES  Y  L R   +    R+ +N  +
Sbjct: 102 P-KKLEELEPESREYWRLLRKQNIWRHNRLSKNKKL 135

[Close]

BLAST of MELO3C008981.2 vs. Swiss-Prot
Match: sp|Q9Y7U8|RM37_SCHPO (54S ribosomal protein L37, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl37 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.8e-04
Identity = 34/124 (27.42%), Postives = 54/124 (43.55%), Query Frame = 0


Query: 14  PMVLVQMPCGKKKKMGLSQIRFFRRNIIV-----SSKDLIQLTSVRSFAAGGKSKKGSKG 73
           P +    P  +    G+SQ   +   +++     SS  L++ + V S  +  K +  S  
Sbjct: 2   PFIESMAPLSRAITRGISQFSCYSNTLVLRSSRNSSSSLVKRSYVSSRVSPKKPQHNSDA 61

Query: 74  GAAAD-APKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELR 132
            ++A      +  S  +  T + G  I   G DP    D EYP WLW LLD+  P S+  
Sbjct: 62  TSSAQKVANKTHTSSVLPGTILKGLCIKAGGVDPVAREDHEYPEWLWSLLDEPAPNSKTA 121

[Close]

BLAST of MELO3C008981.2 vs. TrEMBL
Match: tr|A0A1S4DUD4|A0A1S4DUD4_CUCME (39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 5.0e-81
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGG 60
           MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGG
Sbjct: 1   MLLDNCNILLVTFPMVLVQMPCGKKKKMGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGG 60

Query: 61  KSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKH 120
           KSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKH
Sbjct: 61  KSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWHLLDKH 120

Query: 121 PPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK 161
           PPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK
Sbjct: 121 PPLSELRRKNAESLPYADLRRFVKLDTRARIKENNSIKAK 160

[Close]

BLAST of MELO3C008981.2 vs. TrEMBL
Match: tr|A0A1S3B544|A0A1S3B544_CUCME (54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.1e-65
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87
           MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147
           TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 148 RARIKENNSIKAK 161
           RARIKENNSIKAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]

BLAST of MELO3C008981.2 vs. TrEMBL
Match: tr|A0A0A0KYS4|A0A0A0KYS4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539610 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.4e-60
Identity = 122/131 (93.13%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 30  LSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 89
           +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV
Sbjct: 1   MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTV 60

Query: 90  VGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDTRA 149
           VGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRKNAESLPYADL+RF+KLDTRA
Sbjct: 61  VGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRA 120

Query: 150 RIKENNSIKAK 161
           RIKENNSIKAK
Sbjct: 121 RIKENNSIKAK 131

[Close]

BLAST of MELO3C008981.2 vs. TrEMBL
Match: tr|A0A0A0KP92|A0A0A0KP92_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218850 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.8e-44
Identity = 97/133 (72.93%), Postives = 109/133 (81.95%), Query Frame = 0


Query: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87
           + L+QI  FRR+IIV+SKDLIQLTSVR+F AGGKSKKGSKGGAA DAPKASIL       
Sbjct: 3   LNLNQISLFRRSIIVNSKDLIQLTSVRTFTAGGKSKKGSKGGAAVDAPKASIL------- 62

Query: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147
             +GANIL EG DPK+MADSEY  WLWHLLDKH PLSELRR+N ++LPYAD + FVKLDT
Sbjct: 63  --IGANILNEGVDPKVMADSEYSIWLWHLLDKHLPLSELRRRNVKTLPYADFKCFVKLDT 122

Query: 148 RARIKENNSIKAK 161
           RARIKEN S +AK
Sbjct: 123 RARIKENTSTEAK 126

[Close]

BLAST of MELO3C008981.2 vs. TrEMBL
Match: tr|A0A2P5FL73|A0A2P5FL73_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_057750 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-43
Identity = 98/134 (73.13%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSF-AAGGKSKKGSKGGAAADAPKASILSKEVKS 87
           M +S +R  R +I+    + + L   R+F AAGGK+KKGSKGGAA DAPKASILSKEVKS
Sbjct: 1   MAMSHVRSVRSHIV--GNEAVGLVFRRAFAAAGGKAKKGSKGGAAGDAPKASILSKEVKS 60

Query: 88  TTVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLD 147
           TTVVGANILK+GADPK++ADSEYP WL+HLLDK P LSELRRKN E+LPY DL+RFVKLD
Sbjct: 61  TTVVGANILKDGADPKVLADSEYPDWLFHLLDKRPALSELRRKNVETLPYEDLKRFVKLD 120

Query: 148 TRARIKENNSIKAK 161
            RARIKENNSIKAK
Sbjct: 121 NRARIKENNSIKAK 132

The following BLAST results are available for this feature:

BLAST of MELO3C008981.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899597.1	7.6e-81	100.00	PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_008442187.1	7.7e-65	100.00	PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_004144674.2	9.7e-60	93.13	PREDICTED: 39S ribosomal protein L54, mitochondrial-like [Cucumis sativus] >KGN5...	[more]
XP_022989738.1	2.6e-49	80.45	54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1...	[more]
XP_022154133.1	6.5e-48	78.95	54S ribosomal protein L37, mitochondrial-like [Momordica charantia]	[more]

BLAST of MELO3C008981.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01740.1	1.6e-35	78.41	Mitochondrial ribosomal protein L37	[more]
AT5G14290.1	3.5e-35	60.61	Mitochondrial ribosomal protein L37	[more]

BLAST of MELO3C008981.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CPW3\|RM54_MOUSE	3.6e-05	37.50	39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1...	[more]
sp\|Q9Y7U8\|RM37_SCHPO	8.8e-04	27.42	54S ribosomal protein L37, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of MELO3C008981.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DUD4\|A0A1S4DUD4_CUCME	5.0e-81	100.00	39S ribosomal protein L54, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3B544\|A0A1S3B544_CUCME	5.1e-65	100.00	54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A0A0KYS4\|A0A0A0KYS4_CUCSA	6.4e-60	93.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539610 PE=4 SV=1	[more]
tr\|A0A0A0KP92\|A0A0A0KP92_CUCSA	3.8e-44	72.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218850 PE=4 SV=1	[more]
tr\|A0A2P5FL73\|A0A2P5FL73_9ROSA	2.4e-43	73.13	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_057750 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013870	Ribosomal_L37_mit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008981.2.1	MELO3C008981.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013870	Ribosomal protein L37, mitochondrial	PFAM	PF08561	Ribosomal_L37	coord: 81..120 e-value: 2.7E-13 score: 50.4
None	No IPR available	PANTHER	PTHR28595	FAMILY NOT NAMED	coord: 31..160

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008981.2	Csa4G539610	Cucumber (Chinese Long) v2	cumedB321
MELO3C008981.2	CSPI04G20610	Wild cucumber (PI 183967)	cpimedB324
MELO3C008981.2	Cucsa.357570	Cucumber (Gy14) v1	cgymedB577
MELO3C008981.2	Lsi01G019620	Bottle gourd (USVL1VR-Ls)	lsimedB159
MELO3C008981.2	Bhi03G002246	Wax gourd	medwgoB650
MELO3C008981.2	CsaV3_4G031040	Cucumber (Chinese Long) v3	cucmedB329

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008981.2	Watermelon (97103) v2	medwmbB526
MELO3C008981.2	Wax gourd	medwgoB670
MELO3C008981.2	Cucumber (Gy14) v2	cgybmedB285
MELO3C008981.2	Cucurbita maxima (Rimu)	cmamedB698
MELO3C008981.2	Cucurbita maxima (Rimu)	cmamedB909
MELO3C008981.2	Cucurbita moschata (Rifu)	cmomedB689
MELO3C008981.2	Cucurbita moschata (Rifu)	cmomedB897
MELO3C008981.2	Cucurbita pepo (Zucchini)	cpemedB095
MELO3C008981.2	Cucurbita pepo (Zucchini)	cpemedB533
MELO3C008981.2	Cucumber (Chinese Long) v2	cumedB312
MELO3C008981.2	Watermelon (Charleston Gray)	medwcgB522
MELO3C008981.2	Watermelon (97103) v1	medwmB565
MELO3C008981.2	Silver-seed gourd	carmedB0298
MELO3C008981.2	Silver-seed gourd	carmedB0858