MELO3C008980.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008980.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING finger protein 165-like
Locationchr08 : 21797836 .. 21798520 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTGTACTTCTTCTTCCTTTCATTGTTCTCTTTCCGCCTCTCCAAACACCCATCAATTCCTCATTGTTCGATTTCGGTATTCCAGCCGTCTCGTCATTTCAGATCAAATAATTCAACAGACTCCCTCAACCCTCATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGAACACACTCACTCTTCTTAATTTTGCTTATGAGAATTATCTTAGTTCTCT

mRNA sequence

ATGTCTCTCTGTACTTCTTCTTCCTTTCATTGTTCTCTTTCCGCCTCTCCAAACACCCATCAATTCCTCATTGTTCGATTTCGGTATTCCAGCCGTCTCGTCATTTCAGATCAAATAATTCAACAGACTCCCTCAACCCTCATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGAACACACTCACTCTTCTTAATTTTGCTTATGAGAATTATCTTAGTTCTCT

Coding sequence (CDS)

ATGTCTCTCTGTACTTCTTCTTCCTTTCATTGTTCTCTTTCCGCCTCTCCAAACACCCATCAATTCCTCATTGTTCGATTTCGGTATTCCAGCCGTCTCGTCATTTCAGATCAAATAATTCAACAGACTCCCTCAACCCTCATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGA

Protein sequence

MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRLVISDQIIQQTPSTLMGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Homology
[Close]
BLAST of MELO3C008980.2 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo])

HSP 1 Score: 344.0 bits (881), Expect = 3.7e-91
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 

Query: 48  MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 107
           MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 108 IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 167
           IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120

Query: 168 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Sbjct: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]
BLAST of MELO3C008980.2 vs. NCBI nr
Match: XP_004139003.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_2G130680 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 7.0e-58
Identity = 126/230 (54.78%), Postives = 154/230 (66.96%), Query Frame = 0 

Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVR R+ SRL        ++ D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNL++P QQQ ++++VN+FL SFNL SSV R + H ILSFA QF      FKIE N+
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           D++++              +GE+G     PP  RGA ESAIER + KQKFDGF  EEEEE
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGL----PP--RGASESAIER-VKKQKFDGFRGEEEEE 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           IGDCSVC EE+K KG EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 IGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980.2 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 3.6e-46
Identity = 114/230 (49.57%), Postives = 136/230 (59.13%), Query Frame = 0 

Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVRF   SRL        +I D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       KIEAN+
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           DH+++              +GE+G         RGA ESAIER + KQK D F++     
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLS------PRGASESAIER-VKKQKLDWFSEXXXXX 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
                      K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 XXXXXXXXXXXKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980.2 vs. NCBI nr
Match: KGN54844.1 (hypothetical protein Csa_4G539600 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 1.1e-37
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 0 

Query: 49  GDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKI 108
           G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PSFKI
Sbjct: 39  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSFKI 98

Query: 109 EANIDHVEDLIIGEQGFQET-PPPRTRGAPESAIERLIMKQKFDGFNKEE 158
           EANI +++DLIIGEQGFQET PPPRT G PE AIERL M QKFDGFNKEE
Sbjct: 99  EANIANMDDLIIGEQGFQETPPPPRTTGVPEFAIERL-MTQKFDGFNKEE 147

[Close]
BLAST of MELO3C008980.2 vs. NCBI nr
Match: XP_023006824.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 159.8 bits (403), Expect = 9.9e-36
Identity = 98/207 (47.34%), Postives = 132/207 (63.77%), Query Frame = 0 

Query: 12  SLSASPNTHQFLIVRFRYSSRLV--ISDQIIQQTPSTLMGDTLIPF--SNLRHPRQQQSI 71
           +L++  +  QF+ +R  +SS L+   S QI+QQ+PST +G++L PF   +L HP    + 
Sbjct: 22  TLASHEHPMQFVELRLGHSSHLISRSSRQILQQSPSTPLGESLFPFILRDLEHPPFLPNY 81

Query: 72  QFLVNQFLCSFNLHSSVRRTICHEILSFALQFRA--ILPSFKIEANIDHVEDLIIGEQGF 131
             L   FL SF++  +    I  EI SFAL+  A  +  +F I  ++D +E + +    F
Sbjct: 82  HVL--HFLSSFSIPVAACDIIYQEISSFALRLTADNVDLNFHIVVDVDAIEMIWVDLDPF 141

Query: 132 --QETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPC 191
             +E  PP   GAP SAIERL  +QKFDG  +EEEE  GDCSVC E L+G+ +EVSRIPC
Sbjct: 142 LVEEYSPPAMNGAPASAIERL-QRQKFDGLREEEEE--GDCSVCCEALRGE-EEVSRIPC 201

Query: 192 GHVYHKSCVLTWLQINNSCPLCRAPLE 211
           GHVYHK C+L WLQI+NSCPLCR  LE
Sbjct: 202 GHVYHKCCILKWLQISNSCPLCRTKLE 222

[Close]
BLAST of MELO3C008980.2 vs. TAIR10
Match: AT5G37200.1 (RING/U-box superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 125 FQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIP-C 184
           F   P   +RGA      RL+ +Q+ +  + EEE+E   CS+C E+     +++ R+P C
Sbjct: 122 FPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDE--TCSICIEKFSESHEDIIRVPDC 181

Query: 185 GHVYHKSCVLTWLQINNSCPLCR 207
            H++H+ C+  WL + NSCPLCR
Sbjct: 182 LHLFHQGCLFEWLGLQNSCPLCR 202

[Close]
BLAST of MELO3C008980.2 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-11
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 123 QGFQETPPPR--TRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSR 182
           Q   E  P R  T  A +SAI+ L   +      K    E+  C+VC +E +  G +V +
Sbjct: 176 QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEFE-DGSDVKQ 235

Query: 183 IPCGHVYHKSCVLTWLQINNSCPLCRAPL 210
           +PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 236 MPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]
BLAST of MELO3C008980.2 vs. TAIR10
Match: AT1G60360.1 (RING/U-box superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 160 EIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPL 210
           ++  C+VC EE    G + + +PC H+YHK C++ WL++NNSCP+CR  L
Sbjct: 220 DMSQCTVCMEEFI-VGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

[Close]
BLAST of MELO3C008980.2 vs. TAIR10
Match: AT5G67120.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0 

Query: 127 ETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHV 186
           ET   RT G  E  I+  ++++K++   K  ++E   C +C ++LK   +EVS++ CGH 
Sbjct: 194 ETGDERT-GLSEEVIDENLIRRKYE---KRSDDETKRCVICQQKLK-DNEEVSKLGCGHD 253

Query: 187 YHKSCVLTWLQINNSCPLC 206
           +H  C+  WL + N CPLC
Sbjct: 254 FHFGCIKNWLMVTNKCPLC 267

[Close]
BLAST of MELO3C008980.2 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 156 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           E +++   C+VC EE+   GKEV+ +PC H YH  C++ WL I N+CP+CR  L S
Sbjct: 364 ENDDDAVCCAVCKEEMI-VGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPS 418

[Close]
BLAST of MELO3C008980.2 vs. Swiss-Prot
Match: sp|Q6ZSG1|RN165_HUMAN (E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-12
Identity = 49/167 (29.34%), Postives = 80/167 (47.90%), Query Frame = 0 

Query: 61  PRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFA------LQFRAILPSFKIEANIDH 120
           P  Q    +L    +  F  +SS  + + HEI ++       L  + + PS    A  + 
Sbjct: 179 PIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRES 238

Query: 121 VEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKF------DGFNKEEEEEIGD----C 180
            E+L+  E          TRGA ++ IER     K+      DG  K++E E  D    C
Sbjct: 239 YEELLQLEDRLGNV----TRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKC 298

Query: 181 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           ++C   L+  G++V R+PC H++H+ CV  WL ++  CP+CR  +E+
Sbjct: 299 TICLSMLE-DGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340

[Close]
BLAST of MELO3C008980.2 vs. Swiss-Prot
Match: sp|E9QAU8|RN165_MOUSE (E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.8e-12
Identity = 48/167 (28.74%), Postives = 79/167 (47.31%), Query Frame = 0 

Query: 61  PRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFA------LQFRAILPSFKIEANIDH 120
           P  Q    +L    +  F  +SS  + + HEI ++       L  + + PS    A  + 
Sbjct: 180 PIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRES 239

Query: 121 VEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKF------DGFNKEEEEEIGD----C 180
            E+L+  E          TRGA ++ IER     K+      D   K++E E  D    C
Sbjct: 240 YEELLQLEDRLGNV----TRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKC 299

Query: 181 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           ++C   L+  G++V R+PC H++H+ CV  WL ++  CP+CR  +E+
Sbjct: 300 TICLSMLE-DGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 341

[Close]
BLAST of MELO3C008980.2 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.7e-11
Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 93  LSFALQFRAILPSFKIEANIDHVEDLIIGE------QGFQETPPPR--TRGAPESAIERL 152
           + F +Q       F++ ANI    D  IG       Q   E  P R  T  A +SAIE L
Sbjct: 151 IEFVIQNNPSDQGFRLPANIG---DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEAL 210

Query: 153 IMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPL 210
            +    +        E   C+VC ++ + +G E  ++PC H+YHK C+L WL+++NSCP+
Sbjct: 211 PL---VNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 268

[Close]
BLAST of MELO3C008980.2 vs. Swiss-Prot
Match: sp|Q9C1X4|YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 29/75 (38.67%), Postives = 47/75 (62.67%), Query Frame = 0 

Query: 136 APESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTW 195
           AP  A E +I K K     KE  +E G+C++C E  K    +V ++PC H +H++C+  W
Sbjct: 368 APAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFK-INDDVIQLPCKHYFHENCIKPW 427

Query: 196 LQINNSCPLCRAPLE 211
           L++N +C +CRAP++
Sbjct: 428 LRVNGTCAICRAPVD 441

[Close]
BLAST of MELO3C008980.2 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0 

Query: 123 QGFQETPPPR--TRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSR 182
           Q   E  P R  T  A +SAI+ L   +      K    E+  C+VC +E +  G +V +
Sbjct: 176 QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLK---SEMNQCAVCMDEFE-DGSDVKQ 235

Query: 183 IPCGHVYHKSCVLTWLQINNSCPLCRAPL 210
           +PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 236 MPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]
BLAST of MELO3C008980.2 vs. TrEMBL
Match: tr|A0A1S3B605|A0A1S3B605_CUCME (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.4e-91
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 

Query: 48  MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 107
           MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 108 IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 167
           IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120

Query: 168 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 212
           YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Sbjct: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]
BLAST of MELO3C008980.2 vs. TrEMBL
Match: tr|A0A0A0LHS2|A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.6e-58
Identity = 126/230 (54.78%), Postives = 154/230 (66.96%), Query Frame = 0 

Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVR R+ SRL        ++ D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNL++P QQQ ++++VN+FL SFNL SSV R + H ILSFA QF      FKIE N+
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           D++++              +GE+G     PP  RGA ESAIER + KQKFDGF  EEEEE
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGL----PP--RGASESAIER-VKKQKFDGFRGEEEEE 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           IGDCSVC EE+K KG EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 IGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980.2 vs. TrEMBL
Match: tr|A0A1S3C5T8|A0A1S3C5T8_CUCME (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.4e-46
Identity = 114/230 (49.57%), Postives = 136/230 (59.13%), Query Frame = 0 

Query: 1   MSLCTSSSFHCSLSASPNTHQFLIVRFRYSSRL--------VISDQIIQQTPSTLMGDTL 60
           MS   +S   CS S  PNT Q LIVRF   SRL        +I D I++QTP TL+G+ L
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  IPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANI 120
              SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       KIEAN+
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEE 180
           DH+++              +GE+G         RGA ESAIER + KQK D F++     
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLS------PRGASESAIER-VKKQKLDWFSEXXXXX 180

Query: 181 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
                      K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 181 XXXXXXXXXXXKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980.2 vs. TrEMBL
Match: tr|A0A0A0L1B0|A0A0A0L1B0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539600 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.0e-38
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 0 

Query: 49  GDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKI 108
           G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PSFKI
Sbjct: 39  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSFKI 98

Query: 109 EANIDHVEDLIIGEQGFQET-PPPRTRGAPESAIERLIMKQKFDGFNKEE 158
           EANI +++DLIIGEQGFQET PPPRT G PE AIERL M QKFDGFNKEE
Sbjct: 99  EANIANMDDLIIGEQGFQETPPPPRTTGVPEFAIERL-MTQKFDGFNKEE 147

[Close]
BLAST of MELO3C008980.2 vs. TrEMBL
Match: tr|A0A0A0L3Z2|A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.5e-32
Identity = 99/232 (42.67%), Postives = 130/232 (56.03%), Query Frame = 0 

Query: 1   MSLCTSSSFHC--------SLSASPNTHQFLIVRFRYSSRLV--ISDQIIQQTPSTLMGD 60
           MSL  + SF C        SL+      QF+ +R R+  +LV   S QI+QQT  TL+ D
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  TLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPS----- 120
           TLIPFS            F + +FL S+++ ++V   I + I SFA Q      S     
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCS 180
           F I A++D V    +     ++ P  R +GA  S IER +MK+K+DG   EE+E    CS
Sbjct: 121 FHIIADVDIVYTHWVDLDPAEDAPAVR-KGASTSVIER-VMKEKYDGNGGEEKEGDDQCS 180

Query: 181 VCYEELKGK-------GKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 211
           VCYE+L GK        KEVSRIPCGH+YHKSC+L WL+I+NSCPLCR  LE
Sbjct: 181 VCYEQLYGKRENEXXXXKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELE 230

The following BLAST results are available for this feature:
BLAST of MELO3C008980.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442291.13.7e-91100.00PREDICTED: RING finger protein 165-like [Cucumis melo][more]
XP_004139003.17.0e-5854.78PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN61460.1 ... [more]
XP_008457277.13.6e-4649.57PREDICTED: RING finger protein 165-like [Cucumis melo][more]
KGN54844.11.1e-3780.00hypothetical protein Csa_4G539600 [Cucumis sativus][more]
XP_023006824.19.9e-3647.34RING-H2 finger protein ATL16-like [Cucurbita maxima][more]
BLAST of MELO3C008980.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37200.12.4e-1237.35RING/U-box superfamily protein[more]
AT3G19950.16.0e-1138.20RING/U-box superfamily protein[more]
AT1G60360.11.0e-1046.00RING/U-box superfamily protein[more]
AT5G67120.13.0e-1036.71RING/U-box superfamily protein[more]
AT5G60820.13.9e-1046.43RING/U-box superfamily protein[more]
BLAST of MELO3C008980.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6ZSG1|RN165_HUMAN1.4e-1229.34E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1[more]
sp|E9QAU8|RN165_MOUSE6.8e-1228.74E3 ubiquitin-protein ligase RNF165 OS=Mus musculus OX=10090 GN=Rnf165 PE=1 SV=1[more]
sp|P0CH30|RING1_GOSHI5.7e-1134.40E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
sp|Q9C1X4|YKW3_SCHPO1.7e-1038.67Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra... [more]
sp|Q8LPN7|RNG1L_ARATH1.1e-0938.20E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
BLAST of MELO3C008980.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B605|A0A1S3B605_CUCME2.4e-91100.00RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1[more]
tr|A0A0A0LHS2|A0A0A0LHS2_CUCSA4.6e-5854.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1[more]
tr|A0A1S3C5T8|A0A1S3C5T8_CUCME2.4e-4649.57RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1[more]
tr|A0A0A0L1B0|A0A0A0L1B0_CUCSA7.0e-3880.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G539600 PE=4 SV=1[more]
tr|A0A0A0L3Z2|A0A0A0L3Z2_CUCSA7.5e-3242.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008980.2.1MELO3C008980.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 164..205
e-value: 9.9E-8
score: 41.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 163..206
e-value: 1.5E-13
score: 50.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 164..206
score: 13.242
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 126..210
e-value: 1.0E-18
score: 68.7
NoneNo IPR availablePANTHERPTHR44445FAMILY NOT NAMEDcoord: 152..209
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 163..209

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008980.2Csa4G539600Cucumber (Chinese Long) v2cumedB321
MELO3C008980.2CSPI04G20600Wild cucumber (PI 183967)cpimedB324
MELO3C008980.2Cp4.1LG10g12080Cucurbita pepo (Zucchini)cpemedB095
MELO3C008980.2Cla011601Watermelon (97103) v1medwmB565
MELO3C008980.2Cla97C04G069460Watermelon (97103) v2medwmbB526
MELO3C008980.2Bhi03G002247Wax gourdmedwgoB650
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008980.2Wax gourdmedwgoB670
MELO3C008980.2Cucumber (Gy14) v2cgybmedB285
MELO3C008980.2Cucumber (Gy14) v1cgymedB577
MELO3C008980.2Cucurbita maxima (Rimu)cmamedB698
MELO3C008980.2Cucurbita maxima (Rimu)cmamedB909
MELO3C008980.2Cucurbita moschata (Rifu)cmomedB689
MELO3C008980.2Cucurbita moschata (Rifu)cmomedB897
MELO3C008980.2Cucurbita pepo (Zucchini)cpemedB533
MELO3C008980.2Cucumber (Chinese Long) v2cumedB312
MELO3C008980.2Bottle gourd (USVL1VR-Ls)lsimedB159
MELO3C008980.2Watermelon (Charleston Gray)medwcgB522
MELO3C008980.2Silver-seed gourdcarmedB0298
MELO3C008980.2Silver-seed gourdcarmedB0858
MELO3C008980.2Cucumber (Chinese Long) v3cucmedB329