MELO3C008980 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008980
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRING/U-box superfamily protein, putative
Locationchr8 : 20052001 .. 20052495 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGA

mRNA sequence

ATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGA

Coding sequence (CDS)

ATGGGGGACACTTTGATTCCTTTTTCTAATCTCCGCCATCCTCGACAACAACAATCAATTCAATTTTTGGTTAATCAGTTTCTGTGTTCCTTCAACCTCCATTCCTCTGTTCGCCGAACCATTTGTCACGAGATTCTCTCCTTTGCTTTACAGTTTCGTGCCATTCTTCCGAGCTTCAAAATTGAAGCCAACATCGATCATGTGGAGGACTTGATCATCGGAGAGCAAGGATTTCAAGAAACTCCACCCCCAAGGACAAGAGGGGCGCCGGAGTCTGCGATTGAGAGATTAATAATGAAGCAGAAATTTGATGGGTTTAATAAAGAAGAAGAAGAAGAAATCGGAGATTGCAGTGTTTGTTATGAAGAGCTAAAAGGAAAGGGGAAGGAGGTGAGTAGGATTCCATGTGGTCATGTGTATCACAAATCATGCGTCCTTACATGGCTTCAAATCAACAACTCTTGCCCATTGTGTAGAGCTCCATTAGAATCATGA

Protein sequence

MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES*
Homology
[Close]
BLAST of MELO3C008980 vs. Swiss-Prot
Match: RN165_HUMAN (RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-12
Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = 1 

Query: 14  PRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFA------LQFRAILPSFKIEANIDH 73
           P  Q    +L    +  F  +SS  + + HEI ++       L  + + PS    A  + 
Sbjct: 179 PIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRES 238

Query: 74  VEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKF------DGFNKEEEEEIGD----C 133
            E+L+  E          TRGA ++ IER     K+      DG  K++E E  D    C
Sbjct: 239 YEELLQLEDRLGNV----TRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKC 298

Query: 134 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 165
           ++C   L+  G++V R+PC H++H+ CV  WL ++  CP+CR  +E+
Sbjct: 299 TICLSMLE-DGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 340

[Close]
BLAST of MELO3C008980 vs. Swiss-Prot
Match: RN165_MOUSE (RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11
Identity = 48/167 (28.74%), Postives = 78/167 (46.71%), Query Frame = 1 

Query: 14  PRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFA------LQFRAILPSFKIEANIDH 73
           P  Q    +L    +  F  +SS  + + HEI ++       L  + + PS    A  + 
Sbjct: 180 PIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRES 239

Query: 74  VEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKF------DGFNKEEEEEIGD----C 133
            E+L+  E          TRGA ++ IER     K+      D   K++E E  D    C
Sbjct: 240 YEELLQLEDRLGNV----TRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKC 299

Query: 134 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 165
           ++C   L+  G++V R+PC H++H+ CV  WL ++  CP+CR  +E+
Sbjct: 300 TICLSMLE-DGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIET 341

[Close]
BLAST of MELO3C008980 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 43/125 (34.40%), Postives = 61/125 (48.80%), Query Frame = 1 

Query: 46  LSFALQFRAILPSFKIEANIDHVEDLIIGE------QGFQETPPPR--TRGAPESAIERL 105
           + F +Q       F++ ANI    D  IG       Q   E  P R  T  A +SAIE L
Sbjct: 151 IEFVIQNNPSDQGFRLPANIG---DYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEAL 210

Query: 106 IMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPL 163
            +    +        E   C+VC ++ + +G E  ++PC H+YHK C+L WL+++NSCP+
Sbjct: 211 PL---VNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 268

[Close]
BLAST of MELO3C008980 vs. Swiss-Prot
Match: YKW3_SCHPO (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP32A8.03c PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 1 

Query: 89  APESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTW 148
           AP  A E +I K K     KE  +E G+C++C E  K    +V ++PC H +H++C+  W
Sbjct: 368 APAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFK-INDDVIQLPCKHYFHENCIKPW 427

Query: 149 LQINNSCPLCRAPLE 164
           L++N +C +CRAP++
Sbjct: 428 LRVNGTCAICRAPVD 441

[Close]
BLAST of MELO3C008980 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-09
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 76  QGFQETPPPR--TRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSR 135
           Q   E  P R  T  A +SAI+ L   +      K E   +  C+VC +E +  G +V +
Sbjct: 176 QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSE---MNQCAVCMDEFED-GSDVKQ 235

Query: 136 IPCGHVYHKSCVLTWLQINNSCPLCRAPL 163
           +PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 236 MPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]
BLAST of MELO3C008980 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 101/175 (57.71%), Postives = 123/175 (70.29%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60
           +G+ L   SNL++P QQQ ++++VN+FL SFNL SSV R + H ILSFA QF      FK
Sbjct: 56  IGEALFSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFK 115

Query: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120
           IE N+D++++              +GE+G    PP   RGA ESAIER + KQKFDGF  
Sbjct: 116 IETNVDYIKEYWTEAAPELYPISTVGEEGL---PP---RGASESAIER-VKKQKFDGFRG 175

Query: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 164
           EEEEEIGDCSVC EE+K KG EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 176 EEEEEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980 vs. TrEMBL
Match: A0A0A0L1B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539600 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.9e-38
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 1 

Query: 2   GDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKI 61
           G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PSFKI
Sbjct: 39  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSFKI 98

Query: 62  EANIDHVEDLIIGEQGFQET-PPPRTRGAPESAIERLIMKQKFDGFNKEE 111
           EANI +++DLIIGEQGFQET PPPRT G PE AIERL M QKFDGFNKEE
Sbjct: 99  EANIANMDDLIIGEQGFQETPPPPRTTGVPEFAIERL-MTQKFDGFNKEE 147

[Close]
BLAST of MELO3C008980 vs. TrEMBL
Match: A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-25
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPS-- 60
           + DTLIPFS            F + +FL S+++ ++V   I + I SFA Q      S  
Sbjct: 58  ISDTLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNI 117

Query: 61  ---FKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIG 120
              F I A++D V    +     ++ P  R +GA  S IER +MK+K+DG   EE+E   
Sbjct: 118 NVNFHIIADVDIVYTHWVDLDPAEDAPAVR-KGASTSVIER-VMKEKYDGNGGEEKEGDD 177

Query: 121 DCSVCYEELKGKG-------KEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 164
            CSVCYE+L GK        KEVSRIPCGH+YHKSC+L WL+I+NSCPLCR  LE
Sbjct: 178 QCSVCYEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELE 230

[Close]
BLAST of MELO3C008980 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-24
Identity = 78/173 (45.09%), Postives = 105/173 (60.69%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLC----SFNLHSSVRRTICHEILSFALQFRA-- 60
           + DTLI F      R+ +   F+ +  LC    S+N+  +V   I  +I SFA Q  A  
Sbjct: 58  ISDTLIRFPL----RELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGN 117

Query: 61  ILPSFKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEI 120
           +  +F I A +D V    +     ++    R +GAP SAIERL MK+K+DG   EE E+ 
Sbjct: 118 LNSNFHIIAALDFVYTHWVDLDPAEDAAAVR-QGAPRSAIERL-MKEKYDGNGGEEMED- 177

Query: 121 GDCSVCYEELKG---KGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 165
            +CSVCYE+L G   K KEVSRIPCGH++HKSC+L WL+I+NSCPLCR  LE+
Sbjct: 178 -ECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELEA 222

[Close]
BLAST of MELO3C008980 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.6e-20
Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 1 

Query: 15  RQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQF--RAILPSFKIEANIDHVEDLI 74
           RQ QS  F + Q L S N+  +  + +   I S  LQ   R    +F I A +D +  + 
Sbjct: 66  RQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIW 125

Query: 75  IGEQG-----------FQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCY 134
           +   G             E PP   RG   +  ERL  ++K         EE+GDCS+C 
Sbjct: 126 LPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKM--------EELGDCSICL 185

Query: 135 EELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPL 163
           +EL  + +EV RIPCGHVYH+SC+  WL+ +NSCPLCR PL
Sbjct: 186 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

[Close]
BLAST of MELO3C008980 vs. TAIR10
Match: AT5G37200.1 (AT5G37200.1 RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 1 

Query: 78  FQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIP-C 137
           F   P   +RGA      RL+ +Q+ +  + EEE+E   CS+C E+     +++ R+P C
Sbjct: 122 FPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDET--CSICIEKFSESHEDIIRVPDC 181

Query: 138 GHVYHKSCVLTWLQINNSCPLCR 160
            H++H+ C+  WL + NSCPLCR
Sbjct: 182 LHLFHQGCLFEWLGLQNSCPLCR 202

[Close]
BLAST of MELO3C008980 vs. TAIR10
Match: AT1G60360.1 (AT1G60360.1 RING/U-box superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 1 

Query: 113 EIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPL 163
           ++  C+VC EE    G + + +PC H+YHK C++ WL++NNSCP+CR  L
Sbjct: 220 DMSQCTVCMEEFI-VGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

[Close]
BLAST of MELO3C008980 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 76  QGFQETPPPR--TRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSR 135
           Q   E  P R  T  A +SAI+ L   +      K E   +  C+VC +E +  G +V +
Sbjct: 176 QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSE---MNQCAVCMDEFED-GSDVKQ 235

Query: 136 IPCGHVYHKSCVLTWLQINNSCPLCRAPL 163
           +PC HV+H+ C+L WL+++NSCP+CR  L
Sbjct: 236 MPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]
BLAST of MELO3C008980 vs. TAIR10
Match: AT5G60820.1 (AT5G60820.1 RING/U-box superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 4.0e-10
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 1 

Query: 109 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 165
           E +++   C+VC EE+   GKEV+ +PC H YH  C++ WL I N+CP+CR  L S
Sbjct: 364 ENDDDAVCCAVCKEEMI-VGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPS 418

[Close]
BLAST of MELO3C008980 vs. TAIR10
Match: AT5G64920.1 (AT5G64920.1 COP1-interacting protein 8)

HSP 1 Score: 61.2 bits (147), Expect = 6.8e-10
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 1 

Query: 87  RGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVL 146
           RGAP +A   +   + F+  +  E E +  C+VC + +   G+   ++PCGH YH  C++
Sbjct: 228 RGAPPAAKSAIEALETFE-VSSSEGEMVMVCAVCKDGMV-MGETGKKLPCGHCYHGDCIV 287

Query: 147 TWLQINNSCPLCRAPLES 165
            WL   NSCP+CR  LE+
Sbjct: 288 PWLGTRNSCPVCRFQLET 303

[Close]
BLAST of MELO3C008980 vs. NCBI nr
Match: gi|659083325|ref|XP_008442291.1| (PREDICTED: RING finger protein 165-like [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 5.6e-91
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60
           MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120
           IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCSVC 120

Query: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 165
           YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES
Sbjct: 121 YEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]
BLAST of MELO3C008980 vs. NCBI nr
Match: gi|659121671|ref|XP_008460768.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 268.9 bits (686), Expect = 6.1e-69
Identity = 136/166 (81.93%), Postives = 147/166 (88.55%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHS--SVRRTICHEILSFALQFRAILPS 60
           MG+TLIPFSNL HP QQQSI+FLVN+FL SFNLHS  S RRTIC +ILSFALQF  +  S
Sbjct: 48  MGETLIPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGS 107

Query: 61  FKIEANIDHVEDLIIGEQGFQETP-PPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDC 120
           FKIEAN++HVEDLIIGEQGFQETP PPRT GAPESAIERL  K+KFD  NKEEE  IGDC
Sbjct: 108 FKIEANVEHVEDLIIGEQGFQETPSPPRTTGAPESAIERL-RKEKFDVLNKEEE--IGDC 167

Query: 121 SVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 164
           SVCYEELKG+GKEVSRIPCGHVYHKSC+LTWLQINNSCPLCRAPL+
Sbjct: 168 SVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 210

[Close]
BLAST of MELO3C008980 vs. NCBI nr
Match: gi|449442467|ref|XP_004139003.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 2.5e-46
Identity = 101/175 (57.71%), Postives = 123/175 (70.29%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60
           +G+ L   SNL++P QQQ ++++VN+FL SFNL SSV R + H ILSFA QF      FK
Sbjct: 56  IGEALFSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFK 115

Query: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120
           IE N+D++++              +GE+G    PP   RGA ESAIER + KQKFDGF  
Sbjct: 116 IETNVDYIKEYWTEAAPELYPISTVGEEGL---PP---RGASESAIER-VKKQKFDGFRG 175

Query: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 164
           EEEEEIGDCSVC EE+K KG EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 176 EEEEEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980 vs. NCBI nr
Match: gi|659114890|ref|XP_008457277.1| (PREDICTED: RING finger protein 165-like [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 3.6e-45
Identity = 101/175 (57.71%), Postives = 120/175 (68.57%), Query Frame = 1 

Query: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60
           +G+ L   SNLR P QQQ +Q+LVN+FL SFNL SSV R I H ILSFA QF       K
Sbjct: 56  IGEALFSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVK 115

Query: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120
           IEAN+DH+++              +GE+G         RGA ESAIER + KQK D F++
Sbjct: 116 IEANVDHIKEYWTEAPPELNPISTVGEEGLSP------RGASESAIER-VKKQKLDWFSE 175

Query: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 164
           EEEEEIGDC VC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 176 EEEEEIGDCCVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]
BLAST of MELO3C008980 vs. NCBI nr
Match: gi|700199686|gb|KGN54844.1| (hypothetical protein Csa_4G539600 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 5.5e-38
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 1 

Query: 2   GDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFKI 61
           G+TLI FSNL HPRQQQSI FLVNQFLC FNLHSSV + IC++ILSFALQF AI PSFKI
Sbjct: 39  GNTLILFSNLLHPRQQQSIHFLVNQFLCFFNLHSSVFQIICYKILSFALQFCAIPPSFKI 98

Query: 62  EANIDHVEDLIIGEQGFQET-PPPRTRGAPESAIERLIMKQKFDGFNKEE 111
           EANI +++DLIIGEQGFQET PPPRT G PE AIERL M QKFDGFNKEE
Sbjct: 99  EANIANMDDLIIGEQGFQETPPPPRTTGVPEFAIERL-MTQKFDGFNKEE 147

The following BLAST results are available for this feature:
BLAST of MELO3C008980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN165_HUMAN5.2e-1229.34RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1[more]
RN165_MOUSE2.6e-1128.74RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1[more]
RING1_GOSHI1.3e-1034.40E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
YKW3_SCHPO2.9e-1038.67Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra... [more]
RNG1L_ARATH3.2e-0938.20E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
BLAST of MELO3C008980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHS2_CUCSA1.7e-4657.71Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1[more]
A0A0A0L1B0_CUCSA3.9e-3880.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G539600 PE=4 SV=1[more]
A0A0A0L3Z2_CUCSA2.2e-2544.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G551140 PE=4 SV=1[more]
A0A0A0LRB0_CUCSA3.2e-2445.09Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1[more]
A0A0A0K2W2_CUCSA3.6e-2037.89Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1[more]
BLAST of MELO3C008980 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37200.12.5e-1237.35 RING/U-box superfamily protein[more]
AT1G60360.11.8e-1046.00 RING/U-box superfamily protein[more]
AT3G19950.11.8e-1038.20 RING/U-box superfamily protein[more]
AT5G60820.14.0e-1046.43 RING/U-box superfamily protein[more]
AT5G64920.16.8e-1037.18 COP1-interacting protein 8[more]
BLAST of MELO3C008980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083325|ref|XP_008442291.1|5.6e-91100.00PREDICTED: RING finger protein 165-like [Cucumis melo][more]
gi|659121671|ref|XP_008460768.1|6.1e-6981.93PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|449442467|ref|XP_004139003.1|2.5e-4657.71PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|659114890|ref|XP_008457277.1|3.6e-4557.71PREDICTED: RING finger protein 165-like [Cucumis melo][more]
gi|700199686|gb|KGN54844.1|5.5e-3880.00hypothetical protein Csa_4G539600 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008980T1MELO3C008980T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 116..159
score: 4.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 117..158
score: 9.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 117..159
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 113..160
score: 2.6
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 68..163
score: 1.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 116..162
score: 1.75