MELO3C008517 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008517
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Locationchr5 : 11620145 .. 11620425 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCGTGGGTTTGCCGATGGTCGCAGTCGGCTAAAGAGGTTTGGTGGGTTTCGCTTCGTGGGTCACTCCGGTCGCAAGAGAGAAGATGAAGCTCGCGTCGTTGATACCGTGTAAGGAGTCACTGTCGCAAAATGTGGCCTCGCCGGAGAAAGAAAAGAGAAGAAGAGCAGCGCACCGAGCGAAGAAAAAGGTGAACGCGTGGGAGGAGCTGATGCGGGGTGAAAACGCAGGGGAGGGGAGAGAGAGGGACTAGGTTTTCTAATCATTTGTTTTTCTTATTTT

mRNA sequence

GTCGTGGGTTTGCCGATGGTCGCAGTCGGCTAAAGAGGTTTGGTGGGTTTCGCTTCGTGGGTCACTCCGGTCGCAAGAGAGAAGATGAAGCTCGCGTCGTTGATACCGTGTAAGGAGTCACTGTCGCAAAATGTGGCCTCGCCGGAGAAAGAAAAGAGAAGAAGAGCAGCGCACCGAGCGAAGAAAAAGGTGAACGCGTGGGAGGAGCTGATGCGGGGTGAAAACGCAGGGGAGGGGAGAGAGAGGGACTAGGTTTTCTAATCATTTGTTTTTCTTATTTT

Coding sequence (CDS)

ATGAAGCTCGCGTCGTTGATACCGTGTAAGGAGTCACTGTCGCAAAATGTGGCCTCGCCGGAGAAAGAAAAGAGAAGAAGAGCAGCGCACCGAGCGAAGAAAAAGGTGAACGCGTGGGAGGAGCTGATGCGGGGTGAAAACGCAGGGGAGGGGAGAGAGAGGGACTAG

Protein sequence

MKLASLIPCKESLSQNVASPEKEKRRRAAHRAKKKVNAWEELMRGENAGEGRERD*
Homology
[Close]
BLAST of MELO3C008517 vs. TrEMBL
Match: A0A0A0LL36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G128620 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-09
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 1 

Query: 11 ESLSQNVASPEKEKRRRAAHRAKKKVNAWEELMRGENAGEGRERD 56
          +SLSQNVASPEKEKRRRA     K + AWEEL+RGENAGEGRERD
Sbjct: 44 DSLSQNVASPEKEKRRRAG----KGMKAWEELVRGENAGEGRERD 84

[Close]
BLAST of MELO3C008517 vs. NCBI nr
Match: gi|700206333|gb|KGN61452.1| (hypothetical protein Csa_2G128620 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-09
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 1 

Query: 11 ESLSQNVASPEKEKRRRAAHRAKKKVNAWEELMRGENAGEGRERD 56
          +SLSQNVASPEKEKRRRA     K + AWEEL+RGENAGEGRERD
Sbjct: 44 DSLSQNVASPEKEKRRRAG----KGMKAWEELVRGENAGEGRERD 84

The following BLAST results are available for this feature:
BLAST of MELO3C008517 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL36_CUCSA2.8e-0977.78Uncharacterized protein OS=Cucumis sativus GN=Csa_2G128620 PE=4 SV=1[more]
BLAST of MELO3C008517 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206333|gb|KGN61452.1|4.1e-0977.78hypothetical protein Csa_2G128620 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008517T1MELO3C008517T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008517Csa2G128620Cucumber (Chinese Long) v2cumeB143
MELO3C008517CsaV3_2G011350Cucumber (Chinese Long) v3cucmeB135
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008517Wild cucumber (PI 183967)cpimeB133
MELO3C008517Watermelon (Charleston Gray)mewcgB391
MELO3C008517Cucurbita pepo (Zucchini)cpemeB173
MELO3C008517Bottle gourd (USVL1VR-Ls)lsimeB028
MELO3C008517Cucumber (Gy14) v2cgybmeB114
MELO3C008517Watermelon (97103) v2mewmbB392
MELO3C008517Wax gourdmewgoB448
MELO3C008517Cucumber (Gy14) v1cgymeB445
MELO3C008517Cucurbita maxima (Rimu)cmameB277
MELO3C008517Cucurbita moschata (Rifu)cmomeB268