MELO3C008497.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008497.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 9167531 .. 9168149 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCCACGAACCTTCAAACAGCCACTGCCCATTTCACCAGCTTGTATAGCCCGACCCATTTTGCCTCAGATTCTGAAACTTACCTTACTAGCCCAAATCCTGATTTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCTACTGAAGCCCATCAACTCCTTTTGATTCTTCCACCTATTCCCAAAGATCTTAATCGGTTGGTTCATAGCTCTCCAACTCCACTAACGTCAACTTCCTCGCAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTTAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAGTATTATGGTTGTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACGTGCTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATTATGGTGATCAATGAAAGTTATCTCTTGGAATGTTTGCGAACTTAATTCCTGGAGAAAACGAGCCTTGGTTAAATAGTTGATTCAACTTTACAACCCTAATTTTGTTCTTTTGCAGGAAACCAAGTTATCTAG

mRNA sequence

ATGGGCCCACGAACCTTCAAACAGCCACTGCCCATTTCACCAGCTTGTATAGCCCGACCCATTTTGCCTCAGATTCTGAAACTTACCTTACTAGCCCAAATCCTGATTTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCTACTGAAGCCCATCAACTCCTTTTGATTCTTCCACCTATTCCCAAAGATCTTAATCGGTTGGTTCATAGCTCTCCAACTCCACTAACGTCAACTTCCTCGCAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTTAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAGTATTATGGTTGTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACGTGCTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATTATGGAAACCAAGTTATCTAG

Coding sequence (CDS)

ATGGGCCCACGAACCTTCAAACAGCCACTGCCCATTTCACCAGCTTGTATAGCCCGACCCATTTTGCCTCAGATTCTGAAACTTACCTTACTAGCCCAAATCCTGATTTTTGAGACTCAATCTCTTGATGTTGCCATTTTTGGAGAAGATCCTACTGAAGCCCATCAACTCCTTTTGATTCTTCCACCTATTCCCAAAGATCTTAATCGGTTGGTTCATAGCTCTCCAACTCCACTAACGTCAACTTCCTCGCAAACAATAAATGTTCCACATCCTCCAGCAAACTCTTTAAACCTTCAAGGTTTGCCGCAATCCTTGCTCCACATGGACTTAGTATTATGGTTGTTCCTCCTCTTCCCCGGGCAAAAAAATAAGAGGATGGCCTCCACTGCCAGTAAACGTGCTAAATTACAGAGAGAACTTCAAAATCTTCATTGCTCAATCAACTATGACAAATCAGCAACCCTTGCCATATCTGAGGGAGATTATGGAAACCAAGTTATCTAG

Protein sequence

MGPRTFKQPLPISPACIARPILPQILKLTLLAQILIFETQSLDVAIFGEDPTEAHQLLLILPPIPKDLNRLVHSSPTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHMDLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKSATLAISEGDYGNQVI
Homology
[Close]
BLAST of MELO3C008497.2 vs. NCBI nr
Match: KGN65042.1 (hypothetical protein Csa_1G181550 [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 5.0e-06
Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 0 

Query: 58  LLILPPIPKDLNRLVHSS--------PTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHM 117
           L ILPPI +DL   +H+S        P P   T+S    +P P   SL        L   
Sbjct: 45  LAILPPISEDLTHPIHTSSEHQQSLHPNPNNQTASTQPIIPLPDLASL--------LAQH 104

Query: 118 DLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKS 154
            L  W F LF  QK  +  ST  KR K+QRELQNLH SI+YDKS
Sbjct: 105 GLCTWAFPLFLLQKLLKDLSTTIKRNKMQRELQNLHSSIHYDKS 140

[Close]
BLAST of MELO3C008497.2 vs. TrEMBL
Match: tr|A0A0A0LW63|A0A0A0LW63_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181550 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-06
Identity = 45/104 (43.27%), Postives = 53/104 (50.96%), Query Frame = 0 

Query: 58  LLILPPIPKDLNRLVHSS--------PTPLTSTSSQTINVPHPPANSLNLQGLPQSLLHM 117
           L ILPPI +DL   +H+S        P P   T+S    +P P   SL        L   
Sbjct: 45  LAILPPISEDLTHPIHTSSEHQQSLHPNPNNQTASTQPIIPLPDLASL--------LAQH 104

Query: 118 DLVLWLFLLFPGQKNKRMASTASKRAKLQRELQNLHCSINYDKS 154
            L  W F LF  QK  +  ST  KR K+QRELQNLH SI+YDKS
Sbjct: 105 GLCTWAFPLFLLQKLLKDLSTTIKRNKMQRELQNLHSSIHYDKS 140

The following BLAST results are available for this feature:
BLAST of MELO3C008497.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65042.15.0e-0643.27hypothetical protein Csa_1G181550 [Cucumis sativus][more]
BLAST of MELO3C008497.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C008497.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C008497.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LW63|A0A0A0LW63_CUCSA3.3e-0643.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181550 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008497.2.1MELO3C008497.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008497.2CsGy3G019690Cucumber (Gy14) v2cgybmedB215
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008497.2Cucumber (Gy14) v2cgybmedB356
MELO3C008497.2Cucumber (Gy14) v1cgymedB002
MELO3C008497.2Cucumber (Gy14) v1cgymedB365
MELO3C008497.2Cucurbita maxima (Rimu)cmamedB321
MELO3C008497.2Cucurbita maxima (Rimu)cmamedB347
MELO3C008497.2Cucurbita maxima (Rimu)cmamedB433
MELO3C008497.2Cucurbita maxima (Rimu)cmamedB434
MELO3C008497.2Cucurbita moschata (Rifu)cmomedB306
MELO3C008497.2Cucurbita moschata (Rifu)cmomedB334
MELO3C008497.2Cucurbita moschata (Rifu)cmomedB422
MELO3C008497.2Cucurbita moschata (Rifu)cmomedB423
MELO3C008497.2Cucurbita moschata (Rifu)cmomedB650
MELO3C008497.2Cucurbita pepo (Zucchini)cpemedB045
MELO3C008497.2Cucurbita pepo (Zucchini)cpemedB051
MELO3C008497.2Cucurbita pepo (Zucchini)cpemedB210
MELO3C008497.2Cucurbita pepo (Zucchini)cpemedB236
MELO3C008497.2Cucurbita pepo (Zucchini)cpemedB837
MELO3C008497.2Wild cucumber (PI 183967)cpimedB239
MELO3C008497.2Wild cucumber (PI 183967)cpimedB401
MELO3C008497.2Cucumber (Chinese Long) v2cumedB238
MELO3C008497.2Cucumber (Chinese Long) v2cumedB393
MELO3C008497.2Melon (DHL92) v3.6.1medmedB015
MELO3C008497.2Bottle gourd (USVL1VR-Ls)lsimedB038
MELO3C008497.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C008497.2Watermelon (Charleston Gray)medwcgB411
MELO3C008497.2Watermelon (Charleston Gray)medwcgB417
MELO3C008497.2Watermelon (97103) v1medwmB448
MELO3C008497.2Watermelon (97103) v1medwmB470
MELO3C008497.2Silver-seed gourdcarmedB0519
MELO3C008497.2Silver-seed gourdcarmedB0549
MELO3C008497.2Silver-seed gourdcarmedB0552
MELO3C008497.2Silver-seed gourdcarmedB0976
MELO3C008497.2Cucumber (Chinese Long) v3cucmedB246
MELO3C008497.2Cucumber (Chinese Long) v3cucmedB410
MELO3C008497.2Watermelon (97103) v2medwmbB413
MELO3C008497.2Watermelon (97103) v2medwmbB424
MELO3C008497.2Wax gourdmedwgoB519
MELO3C008497.2Wax gourdmedwgoB531