MELO3C008480 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008480
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ring finger protein, putative
Location	chr3 : 7318554 .. 7320935 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCAGTTTTTGCTTCTTCTTCTTCAATGGTGAATGGGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTCGGAATCGTATTCATGGGATTTGGATTTGAGAAATGATCTGAGATTGGTGTGGAAAAAGCCTAACTGTAAGAAGTGCGAGTTAAATGGAGGAGTATGTGGGATTAAACCCAATTCAACAAATGAAATTCAATGCAAATACAATACTTCAACTCCAAGTGGTACGTTTCTTTCTTTTGTTCATATTGTCTTTTCTTCCCTTTATACGTACCTTTTTAGGTCGGTTCGAGAGTAGTTGTTATAATTCTCGGTTATATAATTTAGAGGTGTGATTATTTTAATTTAGGTTAAGCTAAATGTAAACTATTTTAGTTTTTAGTTTTTTTTTTAGTAAAAAATAAATGTTAAAACAAAATAAAAGCTAATAAATATAAAATATTAAAAAGTTGGCCGTGTCTGGAAATAAAAATTGATAGGATTAATGAGTTGAAGTTTTTATCTTACAAAACTAAGATAAAACGTAAATAATTTTCTTTTTATTATTCCTAAAAAAAGCTTATATTATTAAATTATTTTATTAGACTTAATTCTCTTTTTCTATAACCACCAGGTGTGTTGATAAATAACTTTTTCTTGCACTTCCAATGCATTCGCTCACACACTCTGTTTCCTTTCTCACTTTGCACTATACCTGAGGTATGGACTAGGGTTTGATGAAGATTTGAAAACATAAAAAGGTGGCATAAAATTTGGAAAGATTAATATCTACTATGTTCACTTGCGTAAGATTCTAGAGTGGAAAGACCTTAAAAAACTAAGAGAAAATGTTAAATTTTTATTTGAATCTCGATTGTCAATCATTATCGAAAAAGTTATTCCAACAAATTCTCTCAAAGAGTGCTAGTCATGGAAAATCAAAATATTTGAGTTGTTGTATATACATTTTATAACTTCAGTTTAAAAGGTTTTTATTTGGTGTAGAAGTAGATTGGATTTTAGGTGTTATATTAGTTAGGGTTAGACCAAATTGTGAGTTGACTATTATATGGATAAAAATCACCCATCGACAATAGATTTATTTGAATCAAAGAGTTAGGTAAAGTCTCATTTTCGAATTTTCTTTTTAATTAGTTTTCAAAATTAGTTATTGATGGTTGTTGTCTTGTTGATTCATCAAACACTAGAACATATAATATTATAAAATGACATTAAATTAAAATAGATAAACGTCTAATGAAGCAAAAAAAGAAAAAAAGATAGGCTAAGTTTGTTATTGTTATAGCTTTAAGAAATCATATCATGTTCCAAAAATCTAGGCTTATACTAGTGGGTTAGTTTGACAAGTAAATACTAAATTAAGTTTAGAATAATTAAAAGACGGACAACATTAGGTTCTTAAGATTTGAAGTTTATGTCTATTTGGTCATCAAGGTTTCAAAAATAACACTTTATCTTTAATATTTGGAAAATCATTATAACTAAACTTTAAAAGAAAATCTGAAACTATTCTCAAAACATCAAATACTAAATACTCAAAATAAATATCAACTTCAAATCTCAATAACCAAAAGTGTAATTTATCTATAAAAAAAAATTATACATTCAACTAAAGAAAAACTAAGATATAGATTTGATTTAGTGATAGAAAAAATTATATGAATAGAAATAGTGTACTAACACATAGTATTTTAGAGTATAGCAATTAGACATGAAAGTATATGCAGATATGTCAATTGTTAGATTTGAGTATATTTATAATTGTTATGCTTGAAAGTGATACGGAGTGGAAATGGTTGTAGGGATGCCAAGAGGAGCTCGGTATGCAATATCAATCGGAGTTGGAGTACCTGCAACCATGTGTGTTTTGGGCTTCTTATGCTGCTTTTGTGCTAGAGTCAGATCATCCTCCACAAGAGGGCGCAATTCAAGCATTGAGGCCCACTGGGTCATCTCTTCTCGGCCCATTACAATGGGCCTAGATGGGCCCACTATCGACTCATACCCAAAAATTGTTTTGGGCGAAAGCTTGCGTCTACCAAAGCCCAGTGACAATATATGCCCAATTTGTCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGACTATTCCACAATGTCGACATTTCTTCCATCAAGATTGTATTGATGAATGGCTGAGATTGAATCCCTCTTGCCCTCTCTGTAGAATGCCTCCCCTTAAATCTCCACCGTCCGATTTTCCCCTTTAA

mRNA sequence

ATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCAGTTTTTGCTTCTTCTTCTTCAATGGTGAATGGGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTCGGAATCGTATTCATGGGATTTGGATTTGAGAAATGATCTGAGATTGGTGTGGAAAAAGCCTAACTGTAAGAAGTGCGAGTTAAATGGAGGAGTATGTGGGATTAAACCCAATTCAACAAATGAAATTCAATGCAAATACAATACTTCAACTCCAAGTGGGATGCCAAGAGGAGCTCGGTATGCAATATCAATCGGAGTTGGAGTACCTGCAACCATGTGTGTTTTGGGCTTCTTATGCTGCTTTTGTGCTAGAGTCAGATCATCCTCCACAAGAGGGCGCAATTCAAGCATTGAGGCCCACTGGGTCATCTCTTCTCGGCCCATTACAATGGGCCTAGATGGGCCCACTATCGACTCATACCCAAAAATTGTTTTGGGCGAAAGCTTGCGTCTACCAAAGCCCAGTGACAATATATGCCCAATTTGTCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGACTATTCCACAATGTCGACATTTCTTCCATCAAGATTGTATTGATGAATGGCTGAGATTGAATCCCTCTTGCCCTCTCTGTAGAATGCCTCCCCTTAAATCTCCACCGTCCGATTTTCCCCTTTAA

Coding sequence (CDS)

ATGCTTTTTGGGTCGCCGTTTGATGCGAAAAACACTGTAGATTTCACCTTCTTTAATTGTTCGGGGAGTGATGAAATCCCATATGATTTCAATTTGAACCCAATTTCTTGCCTTAGTGGATTGTCGTATGCAGTTTTTGCTTCTTCTTCTTCAATGGTGAATGGGATTTTGTCGTCGAGGTGTGAGTTGGTGAAGACTGTATCGGTGCCGATGAGTTCGGAATCGTATTCATGGGATTTGGATTTGAGAAATGATCTGAGATTGGTGTGGAAAAAGCCTAACTGTAAGAAGTGCGAGTTAAATGGAGGAGTATGTGGGATTAAACCCAATTCAACAAATGAAATTCAATGCAAATACAATACTTCAACTCCAAGTGGGATGCCAAGAGGAGCTCGGTATGCAATATCAATCGGAGTTGGAGTACCTGCAACCATGTGTGTTTTGGGCTTCTTATGCTGCTTTTGTGCTAGAGTCAGATCATCCTCCACAAGAGGGCGCAATTCAAGCATTGAGGCCCACTGGGTCATCTCTTCTCGGCCCATTACAATGGGCCTAGATGGGCCCACTATCGACTCATACCCAAAAATTGTTTTGGGCGAAAGCTTGCGTCTACCAAAGCCCAGTGACAATATATGCCCAATTTGTCTGTCGGAATATCGGCCCAAAGAGACTGTGAAGACTATTCCACAATGTCGACATTTCTTCCATCAAGATTGTATTGATGAATGGCTGAGATTGAATCCCTCTTGCCCTCTCTGTAGAATGCCTCCCCTTAAATCTCCACCGTCCGATTTTCCCCTTTAA

Protein sequence

MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCIDEWLRLNPSCPLCRMPPLKSPPSDFPL*

Homology

[Close]

BLAST of MELO3C008480 vs. Swiss-Prot
Match: ATL20_ARATH (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35
Identity = 93/273 (34.07%), Postives = 136/273 (49.82%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF    +  +TF  C     IP  ++L  I CLS  + + FA+S+   + +L   C++
Sbjct: 37  GSPFSYGFSFYYTFLTCPNEVVIPV-WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQI 96

Query: 64  VKTVSVPM--------SSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEI 123
           VK + VP+        + E     +    ++ L W  PNC+ CE     CG K  ++ E+
Sbjct: 97  VKGLYVPVDVIYKDVITEEKGFSTVPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEV 156

Query: 124 QCKYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCA--------------RVRSS 183
             KY    P       R  I        T+C++G +   C               R +++
Sbjct: 157 --KYLADPPDETKSRLRPLI-------ITLCIIGGITATCIAAIRIYNSERFVNQRRQNA 216

Query: 184 STRGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRP 243
           +   RN++ +   V+    +T GLD  TI+SY K+ LGES RLP  +  ICPICLSEY  
Sbjct: 217 AITARNTTQQPRGVV----VTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYAS 276

Query: 244 KETVKTIPQCRHFFHQDCIDEWLRLNPSCPLCR 255
           KETV+ +P+C H FH  CIDEWL+++ SCP+CR
Sbjct: 277 KETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295

[Close]

BLAST of MELO3C008480 vs. Swiss-Prot
Match: AT21A_ARATH (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-35
Identity = 96/264 (36.36%), Postives = 141/264 (53.41%), Query Frame = 1


Query: 5   SPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELV 64
           SPF A   V +TF +C   +E+      + I CL   + +  A++S  +   +   C++V
Sbjct: 110 SPFSALYLVSYTFLSCP--NEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIV 169

Query: 65  KTVSVPMS------SESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC- 124
           KT+ VP+S         +S D++ + DL L W  P+C  CE +   CG + N++ +++C 
Sbjct: 170 KTLDVPVSRRVIAKKSRFSTDVNDK-DLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKCF 229

Query: 125 KYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEA---HW 184
            +  S  +  P+  +  +   +G P T+         C   R +S   RN +I A   + 
Sbjct: 230 PFENSGYNTEPQVLKIILLSIIG-PLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNE 289

Query: 185 VISSRPITMGLDGPTIDSYPKIVLGESLRLPKPSDNI-CPICLSEYRPKETVKTIPQCRH 244
           VI    +T GLD   I+SY K  LGES RLP  +D+I CPICLSEY  KETV+ IP+C H
Sbjct: 290 VI----VTTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDH 349

Query: 245 FFHQDCIDEWLRLNPSCPLCRMPP 258
            FH +CID WL+++ SCPLCR  P
Sbjct: 350 CFHSECIDVWLKIHGSCPLCRNSP 365

[Close]

BLAST of MELO3C008480 vs. Swiss-Prot
Match: AT21B_ARATH (Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana GN=ATL21B PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-33
Identity = 89/257 (34.63%), Postives = 129/257 (50.19%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF  +    +TF  C     +P  +   P  CLS  + + FA+S+  +   +   C++
Sbjct: 108 GSPFSPRFDTLYTFLTCPNELVLPSWYPSIP--CLSNSTSSFFATSNFALAESMLPSCQI 167

Query: 64  VKTVSVPMSSE--SYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNT 123
           VK + VP  S      +   L   L L W  PNC+ CE++   CG K  ++ E++C    
Sbjct: 168 VKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNKASPEVKCF--G 227

Query: 124 STPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP- 183
           +  SG    A  A+ I + +     V+ F+ C   R+ ++  R   +   A   +  +P 
Sbjct: 228 AKKSGHLSRAVVAVLICLSIIGA--VILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPR 287

Query: 184 ---ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQ 243
               T GLD  TI+ Y  + LGES R P  +  +CPICLSEY  KETV+ IP+C H FH 
Sbjct: 288 EVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHA 347

Query: 244 DCIDEWLRLNPSCPLCR 255
            CID WL+++ SCPLCR
Sbjct: 348 KCIDVWLKIHGSCPLCR 358

[Close]

BLAST of MELO3C008480 vs. Swiss-Prot
Match: ATL22_ARATH (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 8.7e-33
Identity = 94/269 (34.94%), Postives = 135/269 (50.19%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF    + ++TF  C     I   F    I CL   + + F      + G + S C +
Sbjct: 112 GSPFSFLRSRNYTFLICPKEANITASFRA--IDCLGNTTSSFFVVQFENL-GSMPSSCHI 171

Query: 64  VKTVSVPMS-SESYSWDLDLRN--DLRLVWKKPNCKKCELN-GGVCGIKPNSTNEIQCKY 123
            K + +P S   +Y+   D +N  D+ L W  P+C+ CE      CG K N++++++C  
Sbjct: 172 FKILPLPFSWFVAYTTYPDGQNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECF- 231

Query: 124 NTSTPSGMPRGARYAISI------GVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAH 183
            +S   G+       + I      G     T CV G + C   RV S   +   + +   
Sbjct: 232 -SSVNPGLHNTGLQVLKIMCLSLVGPLTALTFCV-GLVMCSSERVSSQIQQAVVARLSGS 291

Query: 184 WVISSRPIT----MGLDGPTIDSYPKIVLGESLRLPKPS-DNICPICLSEYRPKETVKTI 243
             ++S+P      +GLD  TI+SY K+ LGES RLP  S D +CPICLSEY  KETV+ +
Sbjct: 292 --VTSQPSNEVARIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCL 351

Query: 244 PQCRHFFHQDCIDEWLRLNPSCPLCRMPP 258
           P+C H FH +CID WL+L+ SCP+CR  P
Sbjct: 352 PECEHCFHTECIDAWLKLHSSCPVCRSNP 372

[Close]

BLAST of MELO3C008480 vs. Swiss-Prot
Match: AT21C_ARATH (Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana GN=ATL21C PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 89/259 (34.36%), Postives = 129/259 (49.81%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF     + +TF +C     +P  +   P  CLS  + + FA+S+  +   +   C++
Sbjct: 107 GSPFSPHFDILYTFLSCPNEVVLPSWYPSIP--CLSNSTSSFFATSNYSLAQSMLPSCQI 166

Query: 64  VKTVSVPMSSE--SYSWDLDLRND-LRLVWKKPNCK-KCELNGGVCGIKPNSTNEIQCKY 123
           VK + VP +S      +  DL N  L L W  P+C+ KC       G   NS N   C +
Sbjct: 167 VKRLHVPATSPFGETRFSSDLNNQSLLLEWALPDCRAKCLGATKKTGTIYNS-NIFSCSF 226

Query: 124 NTSTPSG-MPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISS 183
           +    S  +      +  + V V +   V  F+   C  +R   +   +S+I A  V+  
Sbjct: 227 SFLYDSRELFINGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQ 286

Query: 184 RPITM---GLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFF 243
               M   GLD  TI+++ K+ LGES RL   +  +CPICLSEY  KETV+ IP+C H F
Sbjct: 287 PREVMARRGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCF 346

Query: 244 HQDCIDEWLRLNPSCPLCR 255
           H +CID WL+++ SCPLCR
Sbjct: 347 HVECIDVWLKIHGSCPLCR 362

[Close]

BLAST of MELO3C008480 vs. TrEMBL
Match: A0A0A0LC42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603590 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.0e-145
Identity = 251/267 (94.01%), Postives = 255/267 (95.51%), Query Frame = 1


Query: 1   MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR 60
           MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVN ILSSR
Sbjct: 107 MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSR 166

Query: 61  CELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 120
           CELVKTVSVPMS E+YSWDL  RNDLRL WKKPNCKKCELNGG+CGIKPNSTNEIQCKYN
Sbjct: 167 CELVKTVSVPMSLETYSWDL--RNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYN 226

Query: 121 TSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP 180
           TST SGM RGARYAISIGVGVP TMCVLGFLCC CARVRSS T GRNSSIEAHWVISSRP
Sbjct: 227 TSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCARVRSS-TSGRNSSIEAHWVISSRP 286

Query: 181 ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCI 240
           ITMGLDGPTIDSYPKIVLGESLRLPKP+DNICPICLSEYRPKETVKTIPQC+HFFHQDCI
Sbjct: 287 ITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCI 346

Query: 241 DEWLRLNPSCPLCRMPPLKSPPSDFPL 268
           DEWLRLNPSCPLCRMPPLKSPPS FPL
Sbjct: 347 DEWLRLNPSCPLCRMPPLKSPPSHFPL 370

[Close]

BLAST of MELO3C008480 vs. TrEMBL
Match: A0A061G8Y3_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015374 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-72
Identity = 146/268 (54.48%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRC 61
           L GSPF+  N   FTFFNCS  D + Y FN  PI+CLSG +Y VFA+SS+ V   LSS C
Sbjct: 112 LSGSPFNGVNYQKFTFFNCS-LDYLKYGFN--PIACLSGGNYTVFATSSTKVVSSLSSSC 171

Query: 62  ELVKTVSVPMSSESYSWDL--DLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 121
           + V TV+VP+   S+   L  DL N+LRL W KP C+KCE  GG C +K NST +  C  
Sbjct: 172 QRVTTVAVPVEWASHDQILKSDLSNNLRLTWDKPKCRKCESRGGECRLKANSTRQTIC-- 231

Query: 122 NTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSR 181
           + +   G+ R  RYAI++G GVP  +C+LG LC  C +V+S + R RNS  E +  ++ +
Sbjct: 232 SNAPGRGITRSVRYAITVGAGVPTLLCILGLLCFVCGKVQSCTVR-RNSIPELNATVAPQ 291

Query: 182 P-ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQD 241
           P I  GLDGPTI+SYPKIV+GES RLPKP DN CPICL EY PKET+++IPQC+H FH D
Sbjct: 292 PTIEDGLDGPTIESYPKIVIGESRRLPKPDDNTCPICLCEYWPKETLRSIPQCQHCFHAD 351

Query: 242 CIDEWLRLNPSCPLCRMPPLK--SPPSD 265
           CIDEWLRLN +CP+CR  P +  SP  D
Sbjct: 352 CIDEWLRLNATCPICRNSPERPSSPVQD 373

[Close]

BLAST of MELO3C008480 vs. TrEMBL
Match: A0A068U9V2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020001001 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.2e-70
Identity = 133/265 (50.19%), Postives = 176/265 (66.42%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRC 61
           L GSPF A +  DFT FNCS    +    N NPI+CL G  Y + A+SS   + IL+S C
Sbjct: 114 LSGSPFTAVSHQDFTLFNCSIHHRL---HNFNPIACLGGSGYNIVATSSERASRILASSC 173

Query: 62  ELVKTVSVPMSSESYS--WDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 121
            +V T+ VP+    +   W  DL  D+RL W  P+C KCE  GG CG+K NST+ I+CK 
Sbjct: 174 SVVSTIPVPVQLPYHEEVWSSDLSEDIRLTWDSPHCGKCESRGGRCGLKSNSTDHIECK- 233

Query: 122 NTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSR 181
             +  +G+PRGARYAIS+G GVP  + V+G +C  C R+++   R     IE    ++ +
Sbjct: 234 --TQHAGLPRGARYAISVGAGVPTLLFVIGLVCFVCGRLKACR-RQPYPVIEFSSTVARQ 293

Query: 182 PITM-GLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQD 241
           P  + GLDG  I+SYPK VLGES RLPKP+D +CPICLS+Y+PK+T++TIP C+H FH D
Sbjct: 294 PTLLSGLDGAIIESYPKTVLGESRRLPKPNDTVCPICLSDYKPKDTLRTIPACQHCFHAD 353

Query: 242 CIDEWLRLNPSCPLCRMPPLKSPPS 264
           CIDEWLRLN +CP+CR  P +SPP+
Sbjct: 354 CIDEWLRLNAACPVCRNNPKQSPPA 371

[Close]

BLAST of MELO3C008480 vs. TrEMBL
Match: W9RDM2_9ROSA (Putative RING-H2 finger protein ATL21A OS=Morus notabilis GN=L484_006837 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.4e-69
Identity = 140/266 (52.63%), Postives = 175/266 (65.79%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRC 61
           L GSPF      DF FFNCS SD   Y  +LN I CLSG ++ VFA++S  V   LS RC
Sbjct: 110 LSGSPFYGGYNQDFAFFNCS-SDFSSYG-SLNSIGCLSGPTFWVFATASLRVTEFLSPRC 169

Query: 62  ELVKTVSVPMSSESYSWDL--DLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 121
           +L+ T  VP+   +Y   L  +L + LRL W  P C +CE  GG CG K NST E+ C  
Sbjct: 170 QLIGTFPVPVDWPNYEEVLSSELSDHLRLAWDVPACGRCESRGGRCGFKANSTKEVVCSN 229

Query: 122 NTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSR 181
              T  G+PR ARYA+++GVGVP  +C +G LC  C RV++ + R      E +  ++ +
Sbjct: 230 VPET--GIPRTARYAVAVGVGVPVILCFVGLLCFICGRVKTFALR-NGPIAEFNSTVAPQ 289

Query: 182 P-ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQD 241
           P I MGLDGPT++SYPKIVLGES RLPKP D  CPICLSEYRPKE +KTIP+C+H FH D
Sbjct: 290 PTIVMGLDGPTLESYPKIVLGESRRLPKPDDKTCPICLSEYRPKEILKTIPECQHCFHSD 349

Query: 242 CIDEWLRLNPSCPLCRMPPLKSPPSD 265
           CIDEWLRLN SCP+CR  P ++ P +
Sbjct: 350 CIDEWLRLNASCPICRKSPERATPEN 370

[Close]

BLAST of MELO3C008480 vs. TrEMBL
Match: M5XIF1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024723mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.4e-69
Identity = 136/261 (52.11%), Postives = 176/261 (67.43%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR- 61
           L GSPF       FTFFNCS  D + Y   LNPI+CLSG +Y VFA++S+ V   LSS  
Sbjct: 119 LSGSPFHGVTNETFTFFNCS-LDYLKY--KLNPIACLSGSTYTVFATTSTKVIDYLSSSP 178

Query: 62  -CELVKTVSVPMSSESYS--WDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC 121
            C    T  VP+    Y      DL + LRL W  P C +C   GG CG K NS++++ C
Sbjct: 179 TCNRTGTFVVPVDVPLYDEVMSSDLTDHLRLTWDMPGCGRCAARGGQCGFKTNSSHQVVC 238

Query: 122 KYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVIS 181
             +     G+PR ARYAI++GVGVPA +C+LG LCC C++V+ S TRGR +  E + +++
Sbjct: 239 --SNLPQRGIPRSARYAITVGVGVPAILCILGLLCCVCSKVK-SFTRGRRTLPEFNSIVA 298

Query: 182 SRP-ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFH 241
            +P + MGLD P +++YPKI+LGES RLPKP DN CPICLSEYRPKET+KTIP+C+H FH
Sbjct: 299 PQPTVVMGLDRPRLEAYPKIILGESRRLPKPDDNTCPICLSEYRPKETLKTIPKCQHCFH 358

Query: 242 QDCIDEWLRLNPSCPLCRMPP 258
            DCIDEWL++N +CP+CR  P
Sbjct: 359 ADCIDEWLQMNATCPICRNSP 373

[Close]

BLAST of MELO3C008480 vs. TAIR10
Match: AT5G53110.1 (AT5G53110.1 RING/U-box superfamily protein)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-64
Identity = 132/266 (49.62%), Postives = 169/266 (63.53%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR- 61
           L  +PF       FTFFNC  S+ + +   LNPI+CLSG +  VFA+ S  V   LSS+ 
Sbjct: 114 LNSTPFSGVYMRQFTFFNCPTSEYLRFR-PLNPITCLSGKNSTVFATPSPRVINYLSSQS 173

Query: 62  CELVKTVSVPMSSESYSWDL---DLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC 121
           C L+KTV VP+    Y   +   DL ++L L W+ P C +CE+ GG CGIK NS+ EI C
Sbjct: 174 CRLMKTVYVPVRWPFYEQIVSSSDLSDNLWLTWRVPRCSRCEIKGGKCGIKSNSSREIIC 233

Query: 122 KYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRN------SSIE 181
            +    P+ +PR ARYAI++G G+P  + V G  C   +++ S   R R       ++ +
Sbjct: 234 SH-VHKPA-IPRRARYAIAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNAQ 293

Query: 182 AHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQC 241
           AH++ SS  I MGLDGPTI+SYPKIVLGES RLPK  D  C ICLSEY PKET++TIPQC
Sbjct: 294 AHYLHSS-VIVMGLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQC 353

Query: 242 RHFFHQDCIDEWLRLNPSCPLCRMPP 258
           +H FH DCIDEWL+LN +CP+CR  P
Sbjct: 354 QHCFHADCIDEWLKLNGTCPVCRNSP 375

[Close]

BLAST of MELO3C008480 vs. TAIR10
Match: AT1G28040.1 (AT1G28040.1 RING/U-box superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 93/273 (34.07%), Postives = 136/273 (49.82%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF    +  +TF  C     IP  ++L  I CLS  + + FA+S+   + +L   C++
Sbjct: 37  GSPFSYGFSFYYTFLTCPNEVVIPV-WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQI 96

Query: 64  VKTVSVPM--------SSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEI 123
           VK + VP+        + E     +    ++ L W  PNC+ CE     CG K  ++ E+
Sbjct: 97  VKGLYVPVDVIYKDVITEEKGFSTVPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEV 156

Query: 124 QCKYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCA--------------RVRSS 183
             KY    P       R  I        T+C++G +   C               R +++
Sbjct: 157 --KYLADPPDETKSRLRPLI-------ITLCIIGGITATCIAAIRIYNSERFVNQRRQNA 216

Query: 184 STRGRNSSIEAHWVISSRPITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRP 243
           +   RN++ +   V+    +T GLD  TI+SY K+ LGES RLP  +  ICPICLSEY  
Sbjct: 217 AITARNTTQQPRGVV----VTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYAS 276

Query: 244 KETVKTIPQCRHFFHQDCIDEWLRLNPSCPLCR 255
           KETV+ +P+C H FH  CIDEWL+++ SCP+CR
Sbjct: 277 KETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295

[Close]

BLAST of MELO3C008480 vs. TAIR10
Match: AT2G46495.1 (AT2G46495.1 RING/U-box superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 96/264 (36.36%), Postives = 141/264 (53.41%), Query Frame = 1


Query: 5   SPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCELV 64
           SPF A   V +TF +C   +E+      + I CL   + +  A++S  +   +   C++V
Sbjct: 110 SPFSALYLVSYTFLSCP--NEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIV 169

Query: 65  KTVSVPMS------SESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQC- 124
           KT+ VP+S         +S D++ + DL L W  P+C  CE +   CG + N++ +++C 
Sbjct: 170 KTLDVPVSRRVIAKKSRFSTDVNDK-DLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKCF 229

Query: 125 KYNTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEA---HW 184
            +  S  +  P+  +  +   +G P T+         C   R +S   RN +I A   + 
Sbjct: 230 PFENSGYNTEPQVLKIILLSIIG-PLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNE 289

Query: 185 VISSRPITMGLDGPTIDSYPKIVLGESLRLPKPSDNI-CPICLSEYRPKETVKTIPQCRH 244
           VI    +T GLD   I+SY K  LGES RLP  +D+I CPICLSEY  KETV+ IP+C H
Sbjct: 290 VI----VTTGLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDH 349

Query: 245 FFHQDCIDEWLRLNPSCPLCRMPP 258
            FH +CID WL+++ SCPLCR  P
Sbjct: 350 CFHSECIDVWLKIHGSCPLCRNSP 365

[Close]

BLAST of MELO3C008480 vs. TAIR10
Match: AT2G46494.1 (AT2G46494.1 RING/U-box superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 89/257 (34.63%), Postives = 129/257 (50.19%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF  +    +TF  C     +P  +   P  CLS  + + FA+S+  +   +   C++
Sbjct: 108 GSPFSPRFDTLYTFLTCPNELVLPSWYPSIP--CLSNSTSSFFATSNFALAESMLPSCQI 167

Query: 64  VKTVSVPMSSE--SYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYNT 123
           VK + VP  S      +   L   L L W  PNC+ CE++   CG K  ++ E++C    
Sbjct: 168 VKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNKASPEVKCF--G 227

Query: 124 STPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP- 183
           +  SG    A  A+ I + +     V+ F+ C   R+ ++  R   +   A   +  +P 
Sbjct: 228 AKKSGHLSRAVVAVLICLSIIGA--VILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPR 287

Query: 184 ---ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQ 243
               T GLD  TI+ Y  + LGES R P  +  +CPICLSEY  KETV+ IP+C H FH 
Sbjct: 288 EVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHA 347

Query: 244 DCIDEWLRLNPSCPLCR 255
            CID WL+++ SCPLCR
Sbjct: 348 KCIDVWLKIHGSCPLCR 358

[Close]

BLAST of MELO3C008480 vs. TAIR10
Match: AT2G25410.1 (AT2G25410.1 RING/U-box superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 4.9e-34
Identity = 94/269 (34.94%), Postives = 135/269 (50.19%), Query Frame = 1


Query: 4   GSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRCEL 63
           GSPF    + ++TF  C     I   F    I CL   + + F      + G + S C +
Sbjct: 112 GSPFSFLRSRNYTFLICPKEANITASFRA--IDCLGNTTSSFFVVQFENL-GSMPSSCHI 171

Query: 64  VKTVSVPMS-SESYSWDLDLRN--DLRLVWKKPNCKKCELN-GGVCGIKPNSTNEIQCKY 123
            K + +P S   +Y+   D +N  D+ L W  P+C+ CE      CG K N++++++C  
Sbjct: 172 FKILPLPFSWFVAYTTYPDGQNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECF- 231

Query: 124 NTSTPSGMPRGARYAISI------GVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAH 183
            +S   G+       + I      G     T CV G + C   RV S   +   + +   
Sbjct: 232 -SSVNPGLHNTGLQVLKIMCLSLVGPLTALTFCV-GLVMCSSERVSSQIQQAVVARLSGS 291

Query: 184 WVISSRPIT----MGLDGPTIDSYPKIVLGESLRLPKPS-DNICPICLSEYRPKETVKTI 243
             ++S+P      +GLD  TI+SY K+ LGES RLP  S D +CPICLSEY  KETV+ +
Sbjct: 292 --VTSQPSNEVARIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCL 351

Query: 244 PQCRHFFHQDCIDEWLRLNPSCPLCRMPP 258
           P+C H FH +CID WL+L+ SCP+CR  P
Sbjct: 352 PECEHCFHTECIDAWLKLHSSCPVCRSNP 372

[Close]

BLAST of MELO3C008480 vs. NCBI nr
Match: gi|659082012|ref|XP_008441618.1| (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo])

HSP 1 Score: 565.5 bits (1456), Expect = 5.1e-158
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


Query: 1   MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR 60
           MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR
Sbjct: 108 MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR 167

Query: 61  CELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 120
           CELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN
Sbjct: 168 CELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 227

Query: 121 TSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP 180
           TSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP
Sbjct: 228 TSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP 287

Query: 181 ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCI 240
           ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCI
Sbjct: 288 ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCI 347

Query: 241 DEWLRLNPSCPLCRMPPLKSPPSDFPL 268
           DEWLRLNPSCPLCRMPPLKSPPSDFPL
Sbjct: 348 DEWLRLNPSCPLCRMPPLKSPPSDFPL 374

[Close]

BLAST of MELO3C008480 vs. NCBI nr
Match: gi|778681878|ref|XP_011651602.1| (PREDICTED: RING-H2 finger protein ATL20-like [Cucumis sativus])

HSP 1 Score: 523.1 bits (1346), Expect = 2.9e-145
Identity = 251/267 (94.01%), Postives = 255/267 (95.51%), Query Frame = 1


Query: 1   MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSR 60
           MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVN ILSSR
Sbjct: 107 MLFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNEILSSR 166

Query: 61  CELVKTVSVPMSSESYSWDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKYN 120
           CELVKTVSVPMS E+YSWDL  RNDLRL WKKPNCKKCELNGG+CGIKPNSTNEIQCKYN
Sbjct: 167 CELVKTVSVPMSLETYSWDL--RNDLRLGWKKPNCKKCELNGGICGIKPNSTNEIQCKYN 226

Query: 121 TSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSRP 180
           TST SGM RGARYAISIGVGVP TMCVLGFLCC CARVRSS T GRNSSIEAHWVISSRP
Sbjct: 227 TSTQSGMARGARYAISIGVGVPVTMCVLGFLCCLCARVRSS-TSGRNSSIEAHWVISSRP 286

Query: 181 ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQDCI 240
           ITMGLDGPTIDSYPKIVLGESLRLPKP+DNICPICLSEYRPKETVKTIPQC+HFFHQDCI
Sbjct: 287 ITMGLDGPTIDSYPKIVLGESLRLPKPTDNICPICLSEYRPKETVKTIPQCQHFFHQDCI 346

Query: 241 DEWLRLNPSCPLCRMPPLKSPPSDFPL 268
           DEWLRLNPSCPLCRMPPLKSPPS FPL
Sbjct: 347 DEWLRLNPSCPLCRMPPLKSPPSHFPL 370

[Close]

BLAST of MELO3C008480 vs. NCBI nr
Match: gi|590673850|ref|XP_007039003.1| (RING/U-box superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 280.0 bits (715), Expect = 4.3e-72
Identity = 146/268 (54.48%), Postives = 183/268 (68.28%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRC 61
           L GSPF+  N   FTFFNCS  D + Y FN  PI+CLSG +Y VFA+SS+ V   LSS C
Sbjct: 112 LSGSPFNGVNYQKFTFFNCS-LDYLKYGFN--PIACLSGGNYTVFATSSTKVVSSLSSSC 171

Query: 62  ELVKTVSVPMSSESYSWDL--DLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 121
           + V TV+VP+   S+   L  DL N+LRL W KP C+KCE  GG C +K NST +  C  
Sbjct: 172 QRVTTVAVPVEWASHDQILKSDLSNNLRLTWDKPKCRKCESRGGECRLKANSTRQTIC-- 231

Query: 122 NTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSR 181
           + +   G+ R  RYAI++G GVP  +C+LG LC  C +V+S + R RNS  E +  ++ +
Sbjct: 232 SNAPGRGITRSVRYAITVGAGVPTLLCILGLLCFVCGKVQSCTVR-RNSIPELNATVAPQ 291

Query: 182 P-ITMGLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQD 241
           P I  GLDGPTI+SYPKIV+GES RLPKP DN CPICL EY PKET+++IPQC+H FH D
Sbjct: 292 PTIEDGLDGPTIESYPKIVIGESRRLPKPDDNTCPICLCEYWPKETLRSIPQCQHCFHAD 351

Query: 242 CIDEWLRLNPSCPLCRMPPLK--SPPSD 265
           CIDEWLRLN +CP+CR  P +  SP  D
Sbjct: 352 CIDEWLRLNATCPICRNSPERPSSPVQD 373

[Close]

BLAST of MELO3C008480 vs. NCBI nr
Match: gi|1009122805|ref|XP_015878200.1| (PREDICTED: putative RING-H2 finger protein ATL21A [Ziziphus jujuba])

HSP 1 Score: 273.9 bits (699), Expect = 3.1e-70
Identity = 140/268 (52.24%), Postives = 176/268 (65.67%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRC 61
           L GSPF      DF FFNCS S     D+ LNPI+CLSG +Y +FA++S+ +  +LSS+C
Sbjct: 110 LSGSPFYGVFYQDFAFFNCSSSY---LDYGLNPIACLSGSTYTIFATASTAMANLLSSQC 169

Query: 62  ELVKTVSVPMSSESYS--WDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 121
             V T  VP+    Y      DL  DLRL W  P C +CE  GG CG K NS+ EI C  
Sbjct: 170 YSVGTFPVPVQWTFYEKVMSADLGEDLRLTWDVPTCGRCESQGGRCGYKSNSSREIVC-- 229

Query: 122 NTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSR 181
           +    SG+PR ARYA+++GVGVPA +C  G LCC   RV+S +T      ++    ++ +
Sbjct: 230 SNLPASGIPRTARYAVAVGVGVPAVLCFFGLLCCLFGRVKSIATGRPLPVMDFTSAVAPQ 289

Query: 182 PITM-GLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQD 241
           PI + GLDGPT++SYPKIVLGES RLPKP D  CPICLSEY+PKET+KTIP+C+H FH D
Sbjct: 290 PIVVAGLDGPTLESYPKIVLGESRRLPKPEDLTCPICLSEYKPKETLKTIPECQHCFHAD 349

Query: 242 CIDEWLRLNPSCPLCR--MPPLKSPPSD 265
           CID WLRLN +CP+CR    P  S P+D
Sbjct: 350 CIDGWLRLNATCPICRKSQQPSASGPAD 372

[Close]

BLAST of MELO3C008480 vs. NCBI nr
Match: gi|661891195|emb|CDP05077.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 272.3 bits (695), Expect = 8.9e-70
Identity = 133/265 (50.19%), Postives = 176/265 (66.42%), Query Frame = 1


Query: 2   LFGSPFDAKNTVDFTFFNCSGSDEIPYDFNLNPISCLSGLSYAVFASSSSMVNGILSSRC 61
           L GSPF A +  DFT FNCS    +    N NPI+CL G  Y + A+SS   + IL+S C
Sbjct: 114 LSGSPFTAVSHQDFTLFNCSIHHRL---HNFNPIACLGGSGYNIVATSSERASRILASSC 173

Query: 62  ELVKTVSVPMSSESYS--WDLDLRNDLRLVWKKPNCKKCELNGGVCGIKPNSTNEIQCKY 121
            +V T+ VP+    +   W  DL  D+RL W  P+C KCE  GG CG+K NST+ I+CK 
Sbjct: 174 SVVSTIPVPVQLPYHEEVWSSDLSEDIRLTWDSPHCGKCESRGGRCGLKSNSTDHIECK- 233

Query: 122 NTSTPSGMPRGARYAISIGVGVPATMCVLGFLCCFCARVRSSSTRGRNSSIEAHWVISSR 181
             +  +G+PRGARYAIS+G GVP  + V+G +C  C R+++   R     IE    ++ +
Sbjct: 234 --TQHAGLPRGARYAISVGAGVPTLLFVIGLVCFVCGRLKACR-RQPYPVIEFSSTVARQ 293

Query: 182 PITM-GLDGPTIDSYPKIVLGESLRLPKPSDNICPICLSEYRPKETVKTIPQCRHFFHQD 241
           P  + GLDG  I+SYPK VLGES RLPKP+D +CPICLS+Y+PK+T++TIP C+H FH D
Sbjct: 294 PTLLSGLDGAIIESYPKTVLGESRRLPKPNDTVCPICLSDYKPKDTLRTIPACQHCFHAD 353

Query: 242 CIDEWLRLNPSCPLCRMPPLKSPPS 264
           CIDEWLRLN +CP+CR  P +SPP+
Sbjct: 354 CIDEWLRLNAACPVCRNNPKQSPPA 371

The following BLAST results are available for this feature:

BLAST of MELO3C008480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL20_ARATH	1.4e-35	34.07	RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2 SV=2	[more]
AT21A_ARATH	2.4e-35	36.36	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV...	[more]
AT21B_ARATH	2.3e-33	34.63	Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana GN=ATL21B PE=3 SV...	[more]
ATL22_ARATH	8.7e-33	34.94	RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2 SV=2	[more]
AT21C_ARATH	1.9e-27	34.36	Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana GN=ATL21C PE=3 SV...	[more]

BLAST of MELO3C008480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC42_CUCSA	2.0e-145	94.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G603590 PE=4 SV=1	[more]
A0A061G8Y3_THECC	3.0e-72	54.48	RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_015374 PE=4 S...	[more]
A0A068U9V2_COFCA	6.2e-70	50.19	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020001001 PE=4 SV=1	[more]
W9RDM2_9ROSA	1.4e-69	52.63	Putative RING-H2 finger protein ATL21A OS=Morus notabilis GN=L484_006837 PE=4 SV...	[more]
M5XIF1_PRUPE	1.4e-69	52.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024723mg PE=4 SV=1	[more]

BLAST of MELO3C008480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53110.1	1.6e-64	49.62	RING/U-box superfamily protein	[more]
AT1G28040.1	8.1e-37	34.07	RING/U-box superfamily protein	[more]
AT2G46495.1	1.4e-36	36.36	RING/U-box superfamily protein	[more]
AT2G46494.1	1.3e-34	34.63	RING/U-box superfamily protein	[more]
AT2G25410.1	4.9e-34	34.94	RING/U-box superfamily protein	[more]

BLAST of MELO3C008480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082012\|ref\|XP_008441618.1\|	5.1e-158	100.00	PREDICTED: RING-H2 finger protein ATL20-like [Cucumis melo]	[more]
gi\|778681878\|ref\|XP_011651602.1\|	2.9e-145	94.01	PREDICTED: RING-H2 finger protein ATL20-like [Cucumis sativus]	[more]
gi\|590673850\|ref\|XP_007039003.1\|	4.3e-72	54.48	RING/U-box superfamily protein, putative [Theobroma cacao]	[more]
gi\|1009122805\|ref\|XP_015878200.1\|	3.1e-70	52.24	PREDICTED: putative RING-H2 finger protein ATL21A [Ziziphus jujuba]	[more]
gi\|661891195\|emb\|CDP05077.1\|	8.9e-70	50.19	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008480T1	MELO3C008480T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 211..254 score: 7.9
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 212..253 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 212..254 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 209..256 score: 2.5
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 155..261 score: 1.2
None	No IPR available	PANTHER	PTHR14155:SF157	RING-H2 FINGER PROTEIN ATL69-RELATED	coord: 155..261 score: 1.2
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 205..258 score: 1.06

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008480	Csa6G401350	Cucumber (Chinese Long) v2	cumeB477

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008480	Silver-seed gourd	carmeB0066
MELO3C008480	Silver-seed gourd	carmeB0824
MELO3C008480	Cucumber (Chinese Long) v3	cucmeB477
MELO3C008480	Watermelon (97103) v2	mewmbB297
MELO3C008480	Watermelon (97103) v2	mewmbB308
MELO3C008480	Wax gourd	mewgoB323
MELO3C008480	Cucumber (Gy14) v1	cgymeB540
MELO3C008480	Cucurbita maxima (Rimu)	cmameB268
MELO3C008480	Cucurbita maxima (Rimu)	cmameB680
MELO3C008480	Cucurbita moschata (Rifu)	cmomeB259
MELO3C008480	Cucurbita moschata (Rifu)	cmomeB672
MELO3C008480	Wild cucumber (PI 183967)	cpimeB466
MELO3C008480	Watermelon (Charleston Gray)	mewcgB290
MELO3C008480	Watermelon (Charleston Gray)	mewcgB301
MELO3C008480	Watermelon (97103) v1	mewmB309
MELO3C008480	Cucurbita pepo (Zucchini)	cpemeB168
MELO3C008480	Cucurbita pepo (Zucchini)	cpemeB401
MELO3C008480	Bottle gourd (USVL1VR-Ls)	lsimeB350
MELO3C008480	Bottle gourd (USVL1VR-Ls)	lsimeB475
MELO3C008480	Cucumber (Gy14) v2	cgybmeB408