MELO3C008246 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008246
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein YIPF
Locationchr3 : 2290770 .. 2294948 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACCGTGTCTCTATGACCTCTATGACTTCCATTCGAAGAAAATGATCAAACATTAGGGCTCAAACCCATAGAATTCCTTCTCACTCAATCGCTCATCCATTCCTAACTTCGATGAATTTCTGATCTCAGTTAGCAATTTCACTTTTCCTCTTCCTTTCGGTGTTCCCCCCTTTTCTCCTTTTGGCGTTTCATTGTTTCCTCCATGGATGAAACATACACAAATCTTCCTACTAGCCATTTGCTTGGCTCAGTCCCTGTACGTACTTTTCTCAGACGCCTTTTCCTGTTTCTTCTTTTATTTATATCTACTTCTTAAGTTGACCTCTTATTTGTATTGAGAATTTCGCGATGATTGATCTGCTTCGCAATGTGATCGGTTGCAATTTCGTCATTGCACTTACTTTTTTTTGCTTTGTTTGGTGGTTTTTTGCGTGCATGTCATGGTGTTTTTGAGAATTCATCGTAAGTAAAAGGAAAATGGAGTACTGTTCTTTTGAGGTCGTCGAGATTTTTCTTTGCTAAGTAGTGTGGAGTTCAATCAAGAAATTGTTGGTGATTATCGAGATTTTCTTTTCTTTGGTGGCACCTATAAAACGAACATTCGTGATTGATTGTTGAATATGAGTGCATTATCTCTACTGTTTAACAGGGAAATATGTTTGCTAATTCCACCTGCGTCTTCTGAATGATGCCTCTTGCAATATGTTGGCTGTTGGCATGTTTGTTTGTAGTTGAAATATGAAGAACTGGTTTTTTCCCCTCTCCTGAGTTTAGAAGGTTCAAAATGCATTTTGATGATAAGGGAGATTCGATGTTATTATAATCATTGAGGAGATCTGGTATTTTAGCACGTATGCATCGAGTCTCTCACTCTTTAGCCTTATTATGCTTAAGAAGCAAACCAACGATAGTACTCTAGTACAGTAACAAAAGTTTTACCTATTTATTTTTTTTTAATTTAAATTTTATATTTTTAATTATTTCTTGGTTGAACCTGAAATCCTTGTGTGCTTAAATGTTACCGTCTTCAAGTTACTTTATTTTTCAAATTTATGGCCTTCTTTAACCTTCCCTTTGTTTTGGTTGATCGATAGGCTGTAATCAATGAAGAGATTGAGAAAAGCGGTACAGAGCATGAAAGTAAGAACATGTTCCAGTATCGTCTTCTTAGTAATCTTATTTCATTTTGGTTTTCAATTATTAATTTCACCCAATAAAACTATTCTATCTAACTATTTAATTTCACGTAAACAAATTTATATTTCGTCTCTAAGGAACGGCTTTTTAATTCTATGCAGCACCAGAAGCAAGTATGCAGACATTTCCCCCAACTAATGGAGGGGACAGAGGGAGAGGTTATCGAACTCTTGAAACCCCAAGTGGTACGCTGGTCATATACTCCCACTAGGCTAGAGCCTATTACCTATAGGATAGTATGTTATGGTAGTAGTGTAATTGGTGACAATAACAGATAGGGATTATTCGACGAATTTTCCTTTGCTTTTCTCAACTAGGGGTTTCTACTTTACTAATCCTTTAACAATTCAATATTACATTCTTAACCATTATGGGTTGGCTTAGTGTTAAAAAATGAGACATAATCTCAATGACTAACTAAGAGGTTATGTGTTCAATTTATGGTGGTCAACCTACCTAGGAATTAATTTCTTATGAGTTTCCTTGACACCAAGATGTTGTAAGGTTAGGCAGGTTGTCATGTGAGATTACTTGAGGTTTGTGTATGCTAGCCCAGACACTCACGGATATAAAAAAATCAAAATTATATTTTTCCCATGTACATGTGGATCCATCCTTTAAAAAACTAATCAATTCATTCTTCTACTAGCTAGTTTTGGATATACTAAAAGCAAAAGTTGAACTTGTATGGGATCAAATGTTTGTTTCTACAAATCAATCTTAACCTTTGTGTTTGAAATTTTCTTTGTTGTAACTATCATGAGTTGGCCTAATGGCTAATAAGGGCCATGAGTATAGTAAAGGACTTAAAGGAGATGGTTTATATTCATGATAGCCATCTGTCTAGGATATAATAACCTACAAGTTTTCTTGGCACCAAAATATTGCAGGGTCCATCAAGTTGTCTAGTGAGATTAGTTGAGATATGCATAAACTGACTTTAACACTCTTGGATTTCAATAGAAAAGGGATTGTATTTTCCTGGTATCTTTTGACTACCAAGGTTGAAAAATGTCATGTATAATGACTACTGGATGTCTTTACATTTACTTAGCATTGTGGTACAAGGCTCTTGAATCTAAGGTTGAAGCCACCCTTCTAGTTTCAAACCCCCTGGACACAGGATAGGTAGCACATAGCAGGTTTTTGGATATTTGAAAGTAAACCTATTCCAAGGTAGGGTTTCTGAAGATCCAATTCCTGTCAAGCATGCATTTTTATATGGAATTGATTTTTTTTCTTTGGCGAACCATACAATTGACTCCATTTACTTAAATTGTAGATTCTCAGCAGCAACCATCAAATGACTGGAAGGGGGTGTTTAGTGTATCGTCTTACAGTCAATATTTCAATGTGGATACAGACATCGTCATGAATAGATTGATTAGTTCCTTGTATCCCGTTGGTGGAGATTTTTCTAGCAAGATCGATGCAAACCCTGATTTGTGAGTTTTTTTTTTCCTTTCTTAACCTTGATGATTTTACTCTTTGATGGTTGTGGGATTATCTGTGAGCTTTTCAGTCCTACCTTTTGGTACTTTTATTCTTTTTTAAATTTATGTGCCTCCCTGCTTGATCATTCGAGAATTTATATGGAAGTTGATCTTGTTTTTTAAACTAAGTGGATTTTCAAACTCCTTTTGTTGGATTTTATTATGACTTAGATATGGGCTTGTGTGGATCACCACTACGTTGGTATTTGTACTTGCGGCACTTGGAAACTGTGCAACCTTCCTCATGCAAAAGCGAAGTGCTCAAGGTGCTGCATGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCTGGGTCTGTTTATGGTTATGCGATCGTGGTGCCCATGGCATTTTACTTTTCACTTCAATACTTGGGGTCAAATTCTAGCCTCATAAGGTTTTGGTGCTTGTGGGGATACTCTCTTTTCATTTTTATTTTGGCATCTGTAAGCTTCTGGAATCTCTACTCCAATTTCTTTCTCTTCTTTTATCCATAAGATACAATTCCATACATGATTTTACAGAAGTCAACTTTTTTTATAAAAAAAATCTTTGCCATTTTCTTGTTTTGATACTTCAGTTTCTTTTCTACTTCATTTACTTACGTATATTTTGAATTTCTGGTATTCATAGCTCAGTGGATATTGCAATGAGCATATAAGAATAATGAAGCATCTAAGAAAGAATAACCTGTTCCAAAGACTAGATGTTATTAATTTTCATTTCCTGAGGACATGCATAAGTTTTAGTCAGCAAAGTTCCATTTTGATGTGCAATATAACTGCATGATTTATATATCTCTTTTTCTTTTCTAGTTTCTGTTGCTCATTCCGGTTGAAATTCTGCGGTGGTTCATTATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTTCCTTGAATCTGAGGTCCTATATTGACCGAAATGATCTTTCGGTTCTGATAATTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCGAGCTCACTCTGGCTTTTGCGGTCGTCGAACCATATCTCTTAGCTTTGTTTCTGAGTGTTGCCATCTTAACTAAAGATCGGTTTCCCCTTGGTTGGTGTTGGAAGTTCTCGGTCCCTGTAACTTGTGTGATGAATCACAAAGGACCAACAGGAAGAAAACATCAAAGTCGATAGTTTTTATGCTTGGAATTGATCATTTTATCATAACAACAATCTCTAACTAGCCCACGGTTTTGTTTGCAGAGTTCGCAGATGGCATTCCCTCATCACGAATATTGTTTGAGGATAGTGAAATCCTGTTTATTTCACTTTTGATCATAAATTTTCATCGTAGTATTCCACTCAAACACGGATGCCATTGTAAATAGTTCTTTGATCGTTGATGTGATGTGATTGAATTTGAATACAACTTGGAAAGGCACGCCACCTTTTGAAACTTTTTACTTCATTGCATGAAGAATTAATGGAAATGATGGATTTT

mRNA sequence

GACCGTGTCTCTATGACCTCTATGACTTCCATTCGAAGAAAATGATCAAACATTAGGGCTCAAACCCATAGAATTCCTTCTCACTCAATCGCTCATCCATTCCTAACTTCGATGAATTTCTGATCTCAGTTAGCAATTTCACTTTTCCTCTTCCTTTCGGTGTTCCCCCCTTTTCTCCTTTTGGCGTTTCATTGTTTCCTCCATGGATGAAACATACACAAATCTTCCTACTAGCCATTTGCTTGGCTCAGTCCCTGCTGTAATCAATGAAGAGATTGAGAAAAGCGGTACAGAGCATGAAACACCAGAAGCAAGTATGCAGACATTTCCCCCAACTAATGGAGGGGACAGAGGGAGAGGTTATCGAACTCTTGAAACCCCAAGTGATTCTCAGCAGCAACCATCAAATGACTGGAAGGGGGTGTTTAGTGTATCGTCTTACAGTCAATATTTCAATGTGGATACAGACATCGTCATGAATAGATTGATTAGTTCCTTGTATCCCGTTGGTGGAGATTTTTCTAGCAAGATCGATGCAAACCCTGATTTATATGGGCTTGTGTGGATCACCACTACGTTGGTATTTGTACTTGCGGCACTTGGAAACTGTGCAACCTTCCTCATGCAAAAGCGAAGTGCTCAAGGTGCTGCATGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCTGGGTCTGTTTATGGTTATGCGATCGTGGTGCCCATGGCATTTTACTTTTCACTTCAATACTTGGGGTCAAATTCTAGCCTCATAAGGTTTTGGTGCTTGTGGGGATACTCTCTTTTCATTTTTATTTTGGCATCTTTTCTGTTGCTCATTCCGGTTGAAATTCTGCGGTGGTTCATTATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTTCCTTGAATCTGAGGTCCTATATTGACCGAAATGATCTTTCGGTTCTGATAATTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCGAGCTCACTCTGGCTTTTGCGGTCGTCGAACCATATCTCTTAGCTTTGTTTCTGAGTGTTGCCATCTTAACTAAAGATCGGTTTCCCCTTGGTTGGTGTTGGAAGTTCTCGGTCCCTGTAACTTGTGTGATGAATCACAAAGGACCAACAGGAAGAAAACATCAAAGTCGATAGTTTTTATGCTTGGAATTGATCATTTTATCATAACAACAATCTCTAACTAGCCCACGGTTTTGTTTGCAGAGTTCGCAGATGGCATTCCCTCATCACGAATATTGTTTGAGGATAGTGAAATCCTGTTTATTTCACTTTTGATCATAAATTTTCATCGTAGTATTCCACTCAAACACGGATGCCATTGTAAATAGTTCTTTGATCGTTGATGTGATGTGATTGAATTTGAATACAACTTGGAAAGGCACGCCACCTTTTGAAACTTTTTACTTCATTGCATGAAGAATTAATGGAAATGATGGATTTT

Coding sequence (CDS)

ATGGATGAAACATACACAAATCTTCCTACTAGCCATTTGCTTGGCTCAGTCCCTGCTGTAATCAATGAAGAGATTGAGAAAAGCGGTACAGAGCATGAAACACCAGAAGCAAGTATGCAGACATTTCCCCCAACTAATGGAGGGGACAGAGGGAGAGGTTATCGAACTCTTGAAACCCCAAGTGATTCTCAGCAGCAACCATCAAATGACTGGAAGGGGGTGTTTAGTGTATCGTCTTACAGTCAATATTTCAATGTGGATACAGACATCGTCATGAATAGATTGATTAGTTCCTTGTATCCCGTTGGTGGAGATTTTTCTAGCAAGATCGATGCAAACCCTGATTTATATGGGCTTGTGTGGATCACCACTACGTTGGTATTTGTACTTGCGGCACTTGGAAACTGTGCAACCTTCCTCATGCAAAAGCGAAGTGCTCAAGGTGCTGCATGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCTGGGTCTGTTTATGGTTATGCGATCGTGGTGCCCATGGCATTTTACTTTTCACTTCAATACTTGGGGTCAAATTCTAGCCTCATAAGGTTTTGGTGCTTGTGGGGATACTCTCTTTTCATTTTTATTTTGGCATCTTTTCTGTTGCTCATTCCGGTTGAAATTCTGCGGTGGTTCATTATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTTCCTTGAATCTGAGGTCCTATATTGACCGAAATGATCTTTCGGTTCTGATAATTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGA

Protein sequence

MDETYTNLPTSHLLGSVPAVINEEIEKSGTEHETPEASMQTFPPTNGGDRGRGYRTLETPSDSQQQPSNDWKGVFSVSSYSQYFNVDTDIVMNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP*
Homology
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BLAST of MELO3C008246 vs. Swiss-Prot
Match: YIPF1_DICDI (Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-23
Identity = 56/181 (30.94%), Postives = 100/181 (55.25%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLI S+ P+   F + I  NPDLYG  W+ T+LVF++A   N   +     S+   +W  
Sbjct: 145 RLIRSMLPIKFSFFNLIRENPDLYGPFWVLTSLVFIVAVTSNLNEYF---HSSDHKSWEV 204

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           D+  +  +A ++YGY+ V+P+  +   +++     L+   C++GY+LFIF+ AS L +IP
Sbjct: 205 DIQKIVYSAITIYGYSFVIPLILWGIFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIP 264

Query: 123 VEILRWFIILLSGAASASFVSLNL-----RSYIDRNDLSVLIIAAFFLQMALAIFIKVWF 179
           +++++W I+ ++   S  F+  N+       +  R  +   +I A  L + LA+ +K++F
Sbjct: 265 LQLVQWIIVAIASIVSGLFLVTNIFTPLKEDFTKRGLIICAVIGA--LHIGLALVLKLYF 320

[Close]
BLAST of MELO3C008246 vs. Swiss-Prot
Match: YIPF1_PONAB (Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-17
Identity = 56/188 (29.79%), Postives = 98/188 (52.13%), Query Frame = 1 

Query: 2   NRLISSLYPVGGDFSSK--IDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAA 61
           +R+  SL P+ G    +  I +NPDLYG  WI  TLVF +A  GN + FL+     +   
Sbjct: 95  DRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHL-GEKTYR 154

Query: 62  WSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGS------NSSLIRFWCLWGYSLFIFI 121
           +  +   +++AA ++Y YA +VP+A +  L +  S      + S +   C++GYSLFI+I
Sbjct: 155 YVPEFRKVSIAATTIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYI 214

Query: 122 LASFLLLIPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSV---LIIAAFFLQMALA 179
             + L +IP + +RW +++++   S S +++     +  ++  V    I+    L M L+
Sbjct: 215 PTAILWIIPQKAVRWILVMIALGISGSVLAMTFWPAVREDNRRVALATIVTIVLLHMLLS 274

[Close]
BLAST of MELO3C008246 vs. Swiss-Prot
Match: YIPF1_HUMAN (Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 56/188 (29.79%), Postives = 97/188 (51.60%), Query Frame = 1 

Query: 2   NRLISSLYPVGGDFSSK--IDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAA 61
           +R+  SL P+ G    +  I +NPDLYG  WI  TLVF +A  GN + FL+     +   
Sbjct: 95  DRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHL-GEKTYH 154

Query: 62  WSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGS------NSSLIRFWCLWGYSLFIFI 121
           +  +   +++AA  +Y YA +VP+A +  L +  S      + S +   C++GYSLFI+I
Sbjct: 155 YVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYI 214

Query: 122 LASFLLLIPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSV---LIIAAFFLQMALA 179
             + L +IP + +RW +++++   S S +++     +  ++  V    I+    L M L+
Sbjct: 215 PTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLS 274

[Close]
BLAST of MELO3C008246 vs. Swiss-Prot
Match: YIPF1_RAT (Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-16
Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 1 

Query: 2   NRLISSLYPVGGDFSSK--IDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAA 61
           +R+  SL PV G    +  I +NPDLYG  WI  TLVF +A  GN + FL+     +   
Sbjct: 95  DRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHL-GEKTYH 154

Query: 62  WSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGS------NSSLIRFWCLWGYSLFIFI 121
           +  +   +++AA  +Y YA +VP+A +  L +  S      + S +   C++GYSLFI+I
Sbjct: 155 YVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMNIVSYSFLEIVCVYGYSLFIYI 214

Query: 122 LASFLLLIPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSV---LIIAAFFLQMALA 179
             + L +IP  ++RW ++ ++   S S +++     +  ++  V    I+    L + L+
Sbjct: 215 PTAVLWIIPQRVIRWVLVTIALGISGSVLAMTFWPAVREDNRRVALATIVTIMLLHVLLS 274

[Close]
BLAST of MELO3C008246 vs. Swiss-Prot
Match: YIPF1_MOUSE (Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.0e-16
Identity = 56/188 (29.79%), Postives = 96/188 (51.06%), Query Frame = 1 

Query: 2   NRLISSLYPVGGDFSSK--IDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAA 61
           +R+  SL PV G    +  I +NPDLYG  WI  TLVF +A  GN + FL+     +   
Sbjct: 95  DRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHL-GEKTYH 154

Query: 62  WSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGS------NSSLIRFWCLWGYSLFIFI 121
           +  +   +++AA  +Y YA +VP+A +  L +  S      + S +   C++GYSLFI+I
Sbjct: 155 YVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYI 214

Query: 122 LASFLLLIPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSV---LIIAAFFLQMALA 179
             + L +IP  ++RW +++++   S S + +     +  ++  V    I+    L + L+
Sbjct: 215 PTAVLWIIPQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLS 274

[Close]
BLAST of MELO3C008246 vs. TrEMBL
Match: A0A0A0K8E4_CUCSA (Protein YIPF OS=Cucumis sativus GN=Csa_6G008790 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 4.6e-93
Identity = 174/179 (97.21%), Postives = 177/179 (98.88%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           MNRLISSLYP+GGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCAT+LMQKRS QGAAW
Sbjct: 92  MNRLISSLYPIGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATYLMQKRSDQGAAW 151

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
           SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL
Sbjct: 152 SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 211

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           IPVEILRWFIILLSGAASASFVSLNLR+YID NDLSVLIIAAFFLQMALAIFIKVWFFP
Sbjct: 212 IPVEILRWFIILLSGAASASFVSLNLRAYIDGNDLSVLIIAAFFLQMALAIFIKVWFFP 270

[Close]
BLAST of MELO3C008246 vs. TrEMBL
Match: A0A0S3RKS5_PHAAN (Protein YIPF OS=Vigna angularis var. angularis GN=Vigan.03G085500 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.9e-76
Identity = 143/177 (80.79%), Postives = 160/177 (90.40%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLISSL PV GDF SKIDANPDLYGL+WI+TTLVFVLAALGN ATFLMQK +    +WSF
Sbjct: 94  RLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLAALGNLATFLMQKHADNSTSWSF 153

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           DVSYMNVAA S+YGYAIVVP+A+YF LQY+GSN+SLIRFWC+WGYSL IFI++SFLLLIP
Sbjct: 154 DVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIISSFLLLIP 213

Query: 123 VEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           VE LRW IILL+G ASASFV+LNLRSYI+ N+LSV IIAAFFLQ+ALAIFIKVWFFP
Sbjct: 214 VEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQIALAIFIKVWFFP 270

[Close]
BLAST of MELO3C008246 vs. TrEMBL
Match: A0A0L9UW78_PHAAN (Protein YIPF (Fragment) OS=Phaseolus angularis GN=LR48_Vigan07g067500 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.9e-76
Identity = 143/177 (80.79%), Postives = 160/177 (90.40%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLISSL PV GDF SKIDANPDLYGL+WI+TTLVFVLAALGN ATFLMQK +    +WSF
Sbjct: 75  RLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLAALGNLATFLMQKHADNSTSWSF 134

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           DVSYMNVAA S+YGYAIVVP+A+YF LQY+GSN+SLIRFWC+WGYSL IFI++SFLLLIP
Sbjct: 135 DVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIISSFLLLIP 194

Query: 123 VEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           VE LRW IILL+G ASASFV+LNLRSYI+ N+LSV IIAAFFLQ+ALAIFIKVWFFP
Sbjct: 195 VEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQIALAIFIKVWFFP 251

[Close]
BLAST of MELO3C008246 vs. TrEMBL
Match: V7BBI1_PHAVU (Protein YIPF OS=Phaseolus vulgaris GN=PHAVU_008G230200g PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 6.6e-76
Identity = 142/177 (80.23%), Postives = 160/177 (90.40%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLISSL PV GDF SKIDANPDLYGL+WI+TTLVFVLAALGN ATFLMQK +    +WSF
Sbjct: 93  RLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLAALGNLATFLMQKHADNSTSWSF 152

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           DVSYMNVAA S+YGYAIVVP+A+YF LQY+GSN+SLIRFWC+WGYSL IFI++SFLL+IP
Sbjct: 153 DVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIMSSFLLIIP 212

Query: 123 VEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           VE LRW IILL+G ASASFV+LNLRSYI+ N+LSV IIAAFFLQ+ALAIFIKVWFFP
Sbjct: 213 VEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQIALAIFIKVWFFP 269

[Close]
BLAST of MELO3C008246 vs. TrEMBL
Match: C6TH62_SOYBN (Protein YIPF OS=Glycine max GN=GLYMA_14G065500 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.3e-75
Identity = 141/177 (79.66%), Postives = 159/177 (89.83%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLISSL PV GDF SKIDANPDLYGL+WI+TTLVFVLA+LGN ATFLMQK      +WSF
Sbjct: 94  RLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLASLGNLATFLMQKHVDNSTSWSF 153

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           DVSY+NVAA S+YGYAIVVP+A+YF LQY+GSN+SLIRFWC+WGYSL IFI++SFLL+IP
Sbjct: 154 DVSYVNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIMSSFLLIIP 213

Query: 123 VEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           VE LRW IILL+G ASASFV+LNLRSYI+ N+LSV IIAAFFLQMALAIFIKVWFFP
Sbjct: 214 VEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQMALAIFIKVWFFP 270

[Close]
BLAST of MELO3C008246 vs. TAIR10
Match: AT2G39805.2 (AT2G39805.2 Integral membrane Yip1 family protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.0e-71
Identity = 124/180 (68.89%), Postives = 152/180 (84.44%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           +NRL+SSLYP  GDF +KIDANPDLYGLVWI TTLVFVLA+LGNCAT+L++KR+   A W
Sbjct: 97  LNRLMSSLYPTSGDFFNKIDANPDLYGLVWICTTLVFVLASLGNCATYLVKKRTDSNAPW 156

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
            FDV+YMN+AA  +YGYAI+VP+ FYF+L+Y+GS + L+RFWCLWGYSLFIF+  S  LL
Sbjct: 157 IFDVNYMNLAASIIYGYAIIVPLGFYFALRYMGSKADLLRFWCLWGYSLFIFVPTSLPLL 216

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYID-RNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           IPVE LRW IILL+G+AS+ FV+LNLRSY++  ND++V++ AAF LQM L+IFIKVWFFP
Sbjct: 217 IPVEFLRWVIILLAGSASSCFVALNLRSYLETNNDITVVMAAAFGLQMVLSIFIKVWFFP 276

[Close]
BLAST of MELO3C008246 vs. TAIR10
Match: AT3G05280.1 (AT3G05280.1 Integral membrane Yip1 family protein)

HSP 1 Score: 157.1 bits (396), Expect = 9.9e-39
Identity = 80/180 (44.44%), Postives = 119/180 (66.11%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           + RL  SL+P  G F+ K    PDLYG  WI TTL+FV A++G   T++  K   Q   W
Sbjct: 100 VERLKESLFPFRGTFTEKTADKPDLYGPFWICTTLIFVAASIGTFVTYIAHKWKKQ--EW 159

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
           ++D++ +  +AG  YGY  +VP+A Y  L+Y  + S L++ +CL+GYSLF+FI A  L +
Sbjct: 160 NYDINLVTWSAGVFYGYVTIVPLALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSV 219

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYID-RNDLSVLIIAA-FFLQMALAIFIKVWFF 179
           +PVEI RW I  ++G  SA+FV+LNL+++I+   + S+LIIA+ F LQ+ALA+ +K++ F
Sbjct: 220 VPVEIFRWVIAGVAGFMSATFVALNLKAHINSAGERSILIIASIFLLQLALAVVLKLYIF 277

[Close]
BLAST of MELO3C008246 vs. TAIR10
Match: AT5G27490.1 (AT5G27490.1 Integral membrane Yip1 family protein)

HSP 1 Score: 154.8 bits (390), Expect = 4.9e-38
Identity = 75/180 (41.67%), Postives = 117/180 (65.00%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           + RL  SL+P  G F+ K   NPDLYG  WI TTL+FV A++G   T++  K   Q   W
Sbjct: 101 VERLKESLFPFRGTFTEKTANNPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKKQ--EW 160

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
           ++D++ +  +AG  YGY  +VP+A Y  L+Y  + S L++ +CL+GYSLF+FI A  L +
Sbjct: 161 NYDINLVTWSAGVFYGYVTIVPLALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSV 220

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYIDR--NDLSVLIIAAFFLQMALAIFIKVWFF 179
           +P+EI RW I  L+G  SA+FV+LNL+++I+       +++++ F LQ+AL++ +K++ F
Sbjct: 221 VPLEIFRWVIAGLAGFMSATFVALNLKAHINSAGERWFLIVVSIFLLQLALSVVLKLYLF 278

[Close]
BLAST of MELO3C008246 vs. NCBI nr
Match: gi|659081572|ref|XP_008441401.1| (PREDICTED: protein YIPF1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 3.1e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW
Sbjct: 92  MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 151

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
           SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL
Sbjct: 152 SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 211

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP
Sbjct: 212 IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 270

[Close]
BLAST of MELO3C008246 vs. NCBI nr
Match: gi|659081574|ref|XP_008441402.1| (PREDICTED: protein YIPF1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 3.1e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW
Sbjct: 54  MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 113

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
           SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL
Sbjct: 114 SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 173

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP
Sbjct: 174 IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 232

[Close]
BLAST of MELO3C008246 vs. NCBI nr
Match: gi|449441358|ref|XP_004138449.1| (PREDICTED: protein YIPF1 homolog [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 6.6e-93
Identity = 174/179 (97.21%), Postives = 177/179 (98.88%), Query Frame = 1 

Query: 1   MNRLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAW 60
           MNRLISSLYP+GGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCAT+LMQKRS QGAAW
Sbjct: 92  MNRLISSLYPIGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATYLMQKRSDQGAAW 151

Query: 61  SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 120
           SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL
Sbjct: 152 SFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLL 211

Query: 121 IPVEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           IPVEILRWFIILLSGAASASFVSLNLR+YID NDLSVLIIAAFFLQMALAIFIKVWFFP
Sbjct: 212 IPVEILRWFIILLSGAASASFVSLNLRAYIDGNDLSVLIIAAFFLQMALAIFIKVWFFP 270

[Close]
BLAST of MELO3C008246 vs. NCBI nr
Match: gi|965665694|dbj|BAT81182.1| (hypothetical protein VIGAN_03085500 [Vigna angularis var. angularis])

HSP 1 Score: 292.4 bits (747), Expect = 5.6e-76
Identity = 143/177 (80.79%), Postives = 160/177 (90.40%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLISSL PV GDF SKIDANPDLYGL+WI+TTLVFVLAALGN ATFLMQK +    +WSF
Sbjct: 94  RLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLAALGNLATFLMQKHADNSTSWSF 153

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           DVSYMNVAA S+YGYAIVVP+A+YF LQY+GSN+SLIRFWC+WGYSL IFI++SFLLLIP
Sbjct: 154 DVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIISSFLLLIP 213

Query: 123 VEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           VE LRW IILL+G ASASFV+LNLRSYI+ N+LSV IIAAFFLQ+ALAIFIKVWFFP
Sbjct: 214 VEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQIALAIFIKVWFFP 270

[Close]
BLAST of MELO3C008246 vs. NCBI nr
Match: gi|920703746|gb|KOM46971.1| (hypothetical protein LR48_Vigan07g067500, partial [Vigna angularis])

HSP 1 Score: 292.4 bits (747), Expect = 5.6e-76
Identity = 143/177 (80.79%), Postives = 160/177 (90.40%), Query Frame = 1 

Query: 3   RLISSLYPVGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQKRSAQGAAWSF 62
           RLISSL PV GDF SKIDANPDLYGL+WI+TTLVFVLAALGN ATFLMQK +    +WSF
Sbjct: 75  RLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLAALGNLATFLMQKHADNSTSWSF 134

Query: 63  DVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIP 122
           DVSYMNVAA S+YGYAIVVP+A+YF LQY+GSN+SLIRFWC+WGYSL IFI++SFLLLIP
Sbjct: 135 DVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIISSFLLLIP 194

Query: 123 VEILRWFIILLSGAASASFVSLNLRSYIDRNDLSVLIIAAFFLQMALAIFIKVWFFP 180
           VE LRW IILL+G ASASFV+LNLRSYI+ N+LSV IIAAFFLQ+ALAIFIKVWFFP
Sbjct: 195 VEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQIALAIFIKVWFFP 251

The following BLAST results are available for this feature:
BLAST of MELO3C008246 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YIPF1_DICDI2.5e-2330.94Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1[more]
YIPF1_PONAB4.5e-1729.79Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1[more]
YIPF1_HUMAN1.0e-1629.79Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1[more]
YIPF1_RAT3.8e-1629.79Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1[more]
YIPF1_MOUSE5.0e-1629.79Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1[more]
BLAST of MELO3C008246 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8E4_CUCSA4.6e-9397.21Protein YIPF OS=Cucumis sativus GN=Csa_6G008790 PE=3 SV=1[more]
A0A0S3RKS5_PHAAN3.9e-7680.79Protein YIPF OS=Vigna angularis var. angularis GN=Vigan.03G085500 PE=3 SV=1[more]
A0A0L9UW78_PHAAN3.9e-7680.79Protein YIPF (Fragment) OS=Phaseolus angularis GN=LR48_Vigan07g067500 PE=3 SV=1[more]
V7BBI1_PHAVU6.6e-7680.23Protein YIPF OS=Phaseolus vulgaris GN=PHAVU_008G230200g PE=3 SV=1[more]
C6TH62_SOYBN3.3e-7579.66Protein YIPF OS=Glycine max GN=GLYMA_14G065500 PE=2 SV=1[more]
BLAST of MELO3C008246 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G39805.22.0e-7168.89 Integral membrane Yip1 family protein[more]
AT3G05280.19.9e-3944.44 Integral membrane Yip1 family protein[more]
AT5G27490.14.9e-3841.67 Integral membrane Yip1 family protein[more]
BLAST of MELO3C008246 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081572|ref|XP_008441401.1|3.1e-95100.00PREDICTED: protein YIPF1 homolog isoform X1 [Cucumis melo][more]
gi|659081574|ref|XP_008441402.1|3.1e-95100.00PREDICTED: protein YIPF1 homolog isoform X2 [Cucumis melo][more]
gi|449441358|ref|XP_004138449.1|6.6e-9397.21PREDICTED: protein YIPF1 homolog [Cucumis sativus][more]
gi|965665694|dbj|BAT81182.1|5.6e-7680.79hypothetical protein VIGAN_03085500 [Vigna angularis var. angularis][more]
gi|920703746|gb|KOM46971.1|5.6e-7680.79hypothetical protein LR48_Vigan07g067500, partial [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1
IPR006977Yip1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000919 cell plate assembly
biological_process GO:0009553 embryo sac development
biological_process GO:0009555 pollen development
biological_process GO:0032467 positive regulation of cytokinesis
biological_process GO:0060236 regulation of mitotic spindle organization
biological_process GO:2000694 regulation of phragmoplast microtubule organization
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005828 kinetochore microtubule
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46883melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008246T2MELO3C008246T2mRNA
MELO3C008246T1MELO3C008246T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46883MU46883transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 84..239
score: 1.7
NoneNo IPR availablePANTHERPTHR12822UNCHARACTERIZEDcoord: 1..269
score: 1.4E
NoneNo IPR availablePANTHERPTHR12822:SF5INTEGRAL MEMBRANE YIP1 FAMILY PROTEINcoord: 1..269
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008246Csa6G008790Cucumber (Chinese Long) v2cumeB467
MELO3C008246Cla006554Watermelon (97103) v1mewmB328
MELO3C008246ClCG11G006590Watermelon (Charleston Gray)mewcgB272
MELO3C008246Cla97C11G213540Watermelon (97103) v2mewmbB282
MELO3C008246Bhi04G001935Wax gourdmewgoB341
MELO3C008246CSPI06G01290Wild cucumber (PI 183967)cpimeB465
MELO3C008246Cucsa.136270Cucumber (Gy14) v1cgymeB221
MELO3C008246CmoCh04G030580Cucurbita moschata (Rifu)cmomeB671
MELO3C008246CmoCh15G001180Cucurbita moschata (Rifu)cmomeB258
MELO3C008246Lsi03G003490Bottle gourd (USVL1VR-Ls)lsimeB259
MELO3C008246Cp4.1LG01g25410Cucurbita pepo (Zucchini)cpemeB400
MELO3C008246CsGy6G001340Cucumber (Gy14) v2cgybmeB407
MELO3C008246Carg02099Silver-seed gourdcarmeB0267
MELO3C008246Carg06009Silver-seed gourdcarmeB0023
MELO3C008246CsaV3_6G001420Cucumber (Chinese Long) v3cucmeB476
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008246Wild cucumber (PI 183967)cpimeB196
MELO3C008246Wild cucumber (PI 183967)cpimeB391
MELO3C008246Cucumber (Chinese Long) v2cumeB063
MELO3C008246Cucumber (Chinese Long) v2cumeB204
MELO3C008246Watermelon (Charleston Gray)mewcgB294
MELO3C008246Watermelon (Charleston Gray)mewcgB267
MELO3C008246Watermelon (Charleston Gray)mewcgB285
MELO3C008246Watermelon (97103) v1mewmB299
MELO3C008246Watermelon (97103) v1mewmB316
MELO3C008246Watermelon (97103) v1mewmB325
MELO3C008246Cucurbita pepo (Zucchini)cpemeB167
MELO3C008246Cucurbita pepo (Zucchini)cpemeB403
MELO3C008246Cucurbita pepo (Zucchini)cpemeB405
MELO3C008246Cucurbita pepo (Zucchini)cpemeB565
MELO3C008246Cucurbita pepo (Zucchini)cpemeB795
MELO3C008246Bottle gourd (USVL1VR-Ls)lsimeB257
MELO3C008246Bottle gourd (USVL1VR-Ls)lsimeB300
MELO3C008246Cucumber (Gy14) v2cgybmeB170
MELO3C008246Cucumber (Gy14) v2cgybmeB342
MELO3C008246Silver-seed gourdcarmeB0160
MELO3C008246Silver-seed gourdcarmeB0582
MELO3C008246Silver-seed gourdcarmeB0665
MELO3C008246Silver-seed gourdcarmeB0972
MELO3C008246Cucumber (Chinese Long) v3cucmeB063
MELO3C008246Cucumber (Chinese Long) v3cucmeB202
MELO3C008246Cucumber (Chinese Long) v3cucmeB404
MELO3C008246Watermelon (97103) v2mewmbB278
MELO3C008246Watermelon (97103) v2mewmbB300
MELO3C008246Melon (DHL92) v3.5.1memeB069
MELO3C008246Melon (DHL92) v3.5.1memeB119
MELO3C008246Cucumber (Gy14) v1cgymeB244
MELO3C008246Cucumber (Gy14) v1cgymeB293
MELO3C008246Cucumber (Gy14) v1cgymeB314
MELO3C008246Cucurbita maxima (Rimu)cmameB225
MELO3C008246Cucurbita maxima (Rimu)cmameB267
MELO3C008246Cucurbita maxima (Rimu)cmameB679
MELO3C008246Cucurbita maxima (Rimu)cmameB682
MELO3C008246Cucurbita maxima (Rimu)cmameB683
MELO3C008246Cucurbita maxima (Rimu)cmameB751
MELO3C008246Cucurbita maxima (Rimu)cmameB785
MELO3C008246Cucurbita moschata (Rifu)cmomeB209
MELO3C008246Cucurbita moschata (Rifu)cmomeB675
MELO3C008246Cucurbita moschata (Rifu)cmomeB676
MELO3C008246Cucurbita moschata (Rifu)cmomeB743