MELO3C008042 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008042
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative F-box protein At3g10240
Locationchr8 : 7142177 .. 7142431 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGATTATGGCTAATGAAATGAAACTTCTCAAGAGTCAATCGCCACGTCTTTTAGAAAAGTATAAACAAACCCAAAAAACTAACCCAAGTTCTTTGTATCGAGCTCAAGTCGAATGGAGGGAGGAAAGATCAGTCTCTACATAA

mRNA sequence

ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGATTATGGCTAATGAAATGAAACTTCTCAAGAGTCAATCGCCACGTCTTTTAGAAAAGTATAAACAAACCCAAAAAACTAACCCAAGTTCTTTGTATCGAGCTCAAGTCGAATGGAGGGAGGAAAGATCAGTCTCTACATAA

Coding sequence (CDS)

ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGATTATGGCTAATGAAATGAAACTTCTCAAGAGTCAATCGCCACGTCTTTTAGAAAAGTATAAACAAACCCAAAAAACTAACCCAAGTTCTTTGTATCGAGCTCAAGTCGAATGGAGGGAGGAAAGATCAGTCTCTACATAA

Protein sequence

MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKIMANEMKLLKSQSPRLLEKYKQTQKTNPSSLYRAQVEWREERSVST*
Homology
[Close]
BLAST of MELO3C008042 vs. TrEMBL
Match: A0A0A0KKU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483510 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-19
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 

Query: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKIMANEMKLLKSQSP 53
          MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAK MANEMKLLKSQ P
Sbjct: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLP 52

[Close]
BLAST of MELO3C008042 vs. NCBI nr
Match: gi|700193167|gb|KGN48371.1| (hypothetical protein Csa_6G483510 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-19
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1 

Query: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKIMANEMKLLKSQSP 53
          MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAK MANEMKLLKSQ P
Sbjct: 1  MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLP 52

The following BLAST results are available for this feature:
BLAST of MELO3C008042 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKU3_CUCSA1.6e-1996.15Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483510 PE=4 SV=1[more]
BLAST of MELO3C008042 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193167|gb|KGN48371.1|2.3e-1996.15hypothetical protein Csa_6G483510 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008042T1MELO3C008042T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008042Csa6G483510Cucumber (Chinese Long) v2cumeB508
MELO3C008042CSPI06G26620Wild cucumber (PI 183967)cpimeB513
MELO3C008042CsaV3_6G041800Cucumber (Chinese Long) v3cucmeB521
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008042Watermelon (97103) v2mewmbB516
MELO3C008042Wax gourdmewgoB654
MELO3C008042Cucumber (Gy14) v1cgymeB132
MELO3C008042Cucurbita maxima (Rimu)cmameB609
MELO3C008042Cucurbita maxima (Rimu)cmameB799
MELO3C008042Cucurbita moschata (Rifu)cmomeB598
MELO3C008042Cucurbita moschata (Rifu)cmomeB783
MELO3C008042Watermelon (Charleston Gray)mewcgB516
MELO3C008042Watermelon (97103) v1mewmB571
MELO3C008042Cucurbita pepo (Zucchini)cpemeB069
MELO3C008042Cucurbita pepo (Zucchini)cpemeB458
MELO3C008042Bottle gourd (USVL1VR-Ls)lsimeB150
MELO3C008042Cucumber (Gy14) v2cgybmeB446
MELO3C008042Silver-seed gourdcarmeB0242
MELO3C008042Silver-seed gourdcarmeB0806