MELO3C007816.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007816.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Nonsense-mediated mRNA decay NMD3 family protein
Location	chr08 : 5560936 .. 5563429 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCTTTCATCTTCTTCTCGTTCCTTCGTGAGCGCCGACTCACCCCTCCCACCTCTACGTTTTCATCTTCTCCGGCGGCCACTTCCCGTCGCTATTTCCATCCAAGCGTCGATCCTCAGCCGCAAGCCACGCCTTTTTGCTCCTTCAACCCCACGTCAGTCGCGCCCTCTCCTCTATCTCGCACGCTGTCCGCCGCCGCCAGTATCCTTCGTGCCGCGATCCTCCTGAGCTTCTCTTCGCCGTCTGTGGATCTCGTGCTGCCGTGAGTTGTCGCTGGAATCTCAGTATTTGCGTTTTGTTGGTGGTAAGACTTGATGTTTTGCGGGCTTTGTTGAGTTTTACCCTATAATCAATAAGTTTTAAAATCCTGCCAATTCGTACTCTTTTGTGTTAATCAGACGCCGTTTTGAATTTTATTATTATTATTATTAATTACCTATTTCTGTTATAGATTCTTGTTGTAGCTAAATTCTATAAAAATTATCTGTTTTCCATACATTTTGATTAACGAGTATAATAGATCTTCACTGAATTTTTCTGAACGTTTTTATTTTGGAAAAGTAAAATTTTCGACCTGCGGGTATCAATTCAGATTGAATTTCATTTCTTATTCAAACCAAATCGTGCCAAACAAGGGGCTAGAATTTGGCTTGGATTCATTTTTTTGAAAGCCTTTTCTTGCGAATTTATTTACTTTATATTATAAACTTTAGGATTTAACTGGTGTTGGTTGGTTCATCTTTGTTAGGAGTATATACCATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCACTGTCTTATGTTGCAAATGTGGAATTCCCATGACACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCCGAGGTTGACATCACTGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGACTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCACAATTAGAATCAAAGGAACTATTGACATTCTGTATCAAAAGGTTGAGAAATTTGAATAAAGTTAAACTGGTGCATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCCTACGTTGTGGAGTATGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGATCCAGGCTAATCCCGATCAATGGGTGGCTTCTGTTCAACTTAGGCAACATGTTCCTCACCGCCGTACCTTTTTCTTCTTGGAGCAATTGATACTGAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAGCAGATGGATCAAGGTATTGATTTTTTCTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTCGTTGGAAAGGTTGCTCCAATCAGGAGCCGTCACGATAAACAACTTGTTTCACATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGCCCTCTTGTAATTTGCACCAAAGTTACAAATGCTATTGCTTTACTTGATCCATTCACATTAAGGCACTGCTTCTTGGATGCTGATCAATATTGGAGGACATCCTTTAGGTCTCTACTTACCAGCAGGCAACTTGTGGAATATGTTGTATTGGATATAGAAAATGTTTCAACTGAAGTCAATGTTGCTGGTTCCAAGTATATGTTGGCCTATGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACGATGTTCTCCATAAAAACCCATCTAGGTCATATCTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAACGATATGGAGCTAGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCGATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGTAAGCCTCGATCATGGAAGCTGAAATCTCTTGCAATGGATGTTGATGATAAAAGTAAAGTAGATGAAAATAAGATGAACTCCGAATACGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATTTCATTGTACCGTAATAGAGAATACCAACCATCTGAAATTACTGATGGGGAAGATGGACCGTCAGTACCACTTGACGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGAGACGATGCCATGAACGAGTAAGTAGTGCCCTGCAGCGCTCGATTTTCTTTGTTAGAAATGTGGGGTTGGAGGCAATTCTGTAATTTAATTGTTCGAATTATGCTCATTTTGGCCCACGCAACAAGGAGTTGAAAAGGTGTGTTATTGCTTGTATTTTCATTCCTATAGCATCTCTGGTCTTTTTCTAGTTTGTTTACAAGAGGATACAAATTTATTATCAACAAATTTTTGTTTTC

mRNA sequence

GAAATCTTTCATCTTCTTCTCGTTCCTTCGTGAGCGCCGACTCACCCCTCCCACCTCTACGTTTTCATCTTCTCCGGCGGCCACTTCCCGTCGCTATTTCCATCCAAGCGTCGATCCTCAGCCGCAAGCCACGCCTTTTTGCTCCTTCAACCCCACGTCAGTCGCGCCCTCTCCTCTATCTCGCACGCTGTCCGCCGCCGCCAGTATCCTTCGTGCCGCGATCCTCCTGAGCTTCTCTTCGCCGTCTGTGGATCTCGTGCTGCCGTGAGTTGTCGCTGGAATCTCAGTATTTGCGTTTTGTTGGTGGAGTATATACCATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCACTGTCTTATGTTGCAAATGTGGAATTCCCATGACACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCCGAGGTTGACATCACTGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGACTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCACAATTAGAATCAAAGGAACTATTGACATTCTGTATCAAAAGGTTGAGAAATTTGAATAAAGTTAAACTGGTGCATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCCTACGTTGTGGAGTATGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGATCCAGGCTAATCCCGATCAATGGGTGGCTTCTGTTCAACTTAGGCAACATGTTCCTCACCGCCGTACCTTTTTCTTCTTGGAGCAATTGATACTGAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAGCAGATGGATCAAGGTATTGATTTTTTCTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTCGTTGGAAAGGTTGCTCCAATCAGGAGCCGTCACGATAAACAACTTGTTTCACATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGCCCTCTTGTAATTTGCACCAAAGTTACAAATGCTATTGCTTTACTTGATCCATTCACATTAAGGCACTGCTTCTTGGATGCTGATCAATATTGGAGGACATCCTTTAGGTCTCTACTTACCAGCAGGCAACTTGTGGAATATGTTGTATTGGATATAGAAAATGTTTCAACTGAAGTCAATGTTGCTGGTTCCAAGTATATGTTGGCCTATGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACGATGTTCTCCATAAAAACCCATCTAGGTCATATCTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAACGATATGGAGCTAGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCGATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGTAAGCCTCGATCATGGAAGCTGAAATCTCTTGCAATGGATGTTGATGATAAAAGTAAAGTAGATGAAAATAAGATGAACTCCGAATACGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATTTCATTGTACCGTAATAGAGAATACCAACCATCTGAAATTACTGATGGGGAAGATGGACCGTCAGTACCACTTGACGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGAGACGATGCCATGAACGAGTAAGTAGTGCCCTGCAGCGCTCGATTTTCTTTGTTAGAAATGTGGGGTTGGAGGCAATTCTGTAATTTAATTGTTCGAATTATGCTCATTTTGGCCCACGCAACAAGGAGTTGAAAAGGTGTGTTATTGCTTGTATTTTCATTCCTATAGCATCTCTGGTCTTTTTCTAGTTTGTTTACAAGAGGATACAAATTTATTATCAACAAATTTTTGTTTTC

Coding sequence (CDS)

ATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCACTGTCTTATGTTGCAAATGTGGAATTCCCATGACACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCCGAGGTTGACATCACTGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGACTGCGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCACAATTAGAATCAAAGGAACTATTGACATTCTGTATCAAAAGGTTGAGAAATTTGAATAAAGTTAAACTGGTGCATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTCAAGTTGAAGGTTCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCCTACGTTGTGGAGTATGTTGTACAGGATCACTTGTGTGAGTCTTGCTCAAGGATCCAGGCTAATCCCGATCAATGGGTGGCTTCTGTTCAACTTAGGCAACATGTTCCTCACCGCCGTACCTTTTTCTTCTTGGAGCAATTGATACTGAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAGCAGATGGATCAAGGTATTGATTTTTTCTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTCGTTGGAAAGGTTGCTCCAATCAGGAGCCGTCACGATAAACAACTTGTTTCACATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGCCCTCTTGTAATTTGCACCAAAGTTACAAATGCTATTGCTTTACTTGATCCATTCACATTAAGGCACTGCTTCTTGGATGCTGATCAATATTGGAGGACATCCTTTAGGTCTCTACTTACCAGCAGGCAACTTGTGGAATATGTTGTATTGGATATAGAAAATGTTTCAACTGAAGTCAATGTTGCTGGTTCCAAGTATATGTTGGCCTATGCCCAAGTAGCTCGTGTATCAGATTTTGGAAGGAATGACACGATGTTCTCCATAAAAACCCATCTAGGTCATATCTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAACGATATGGAGCTAGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCGATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGTAAGCCTCGATCATGGAAGCTGAAATCTCTTGCAATGGATGTTGATGATAAAAGTAAAGTAGATGAAAATAAGATGAACTCCGAATACGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATTTCATTGTACCGTAATAGAGAATACCAACCATCTGAAATTACTGATGGGGAAGATGGACCGTCAGTACCACTTGACGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGAGACGATGCCATGAACGAGTAA

Protein sequence

MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDELLADLDLSEGEGDDAMNE

Homology

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BLAST of MELO3C007816.2 vs. NCBI nr
Match: XP_008440695.1 (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo])

HSP 1 Score: 1014.6 bits (2622), Expect = 1.2e-292
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

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BLAST of MELO3C007816.2 vs. NCBI nr
Match: XP_004143504.1 (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypothetical protein Csa_6G502070 [Cucumis sativus])

HSP 1 Score: 1001.1 bits (2587), Expect = 1.3e-288
Identity = 497/505 (98.42%), Postives = 501/505 (99.21%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLF+VQQTIGTVLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL+MDVDDK+KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of MELO3C007816.2 vs. NCBI nr
Match: XP_022149109.1 (60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149123.1 60S ribosomal export protein NMD3 [Momordica charantia])

HSP 1 Score: 954.5 bits (2466), Expect = 1.4e-274
Identity = 469/505 (92.87%), Postives = 489/505 (96.83%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYV EYVVQDH+CESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLNGAILEQSYVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEI PICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEY++LDIENVS EVNV GSKY+LA AQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGL LPEAIL+KKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL MDVDDK +VD++KMNSEYEQFLRDLEENPDLRFNISLYRNREYQ SE+TDGEDG
Sbjct: 421 KLKSLDMDVDDKGRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSE + DD MNE
Sbjct: 481 PSVPLEELLADLDLSEQDEDDGMNE 505

[Close]

BLAST of MELO3C007816.2 vs. NCBI nr
Match: XP_022950672.1 (60S ribosomal export protein NMD3-like [Cucurbita moschata])

HSP 1 Score: 941.8 bits (2433), Expect = 9.6e-271
Identity = 461/492 (93.70%), Postives = 480/492 (97.56%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+R+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMD+GIDFFFSNRSH VKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL MDVDD+ + DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 481 PSVPLDELLADL 493
           PSVPL+ELLADL
Sbjct: 481 PSVPLEELLADL 492

[Close]

BLAST of MELO3C007816.2 vs. NCBI nr
Match: XP_023544705.1 (60S ribosomal export protein NMD3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 941.8 bits (2433), Expect = 9.6e-271
Identity = 461/492 (93.70%), Postives = 480/492 (97.56%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+R+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMD+GIDFFFSNRSH VKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDT+FSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL MDVDD+ + DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 481 PSVPLDELLADL 493
           PSVPL+ELLADL
Sbjct: 481 PSVPLEELLADL 492

[Close]

BLAST of MELO3C007816.2 vs. TAIR10
Match: AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein)

HSP 1 Score: 703.0 bits (1813), Expect = 1.4e-202
Identity = 350/499 (70.14%), Postives = 413/499 (82.77%), Query Frame = 0


Query: 4   ETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
           E+G+F VQQTIG+VLCCKCG+PM PNAANMCV CL SEVDITEGLQK + I +CP+C  Y
Sbjct: 6   ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65

Query: 64  LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLH 123
           LQPP+TWIK Q ESKELLTFCIKRL+NLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66  LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125

Query: 124 GAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183
           GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV HRRTFF+LEQLIL+H A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185

Query: 184 AASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243
           A+ AIRI+Q+DQGIDFFF N+SH   FVEF+ KV PI  R D+QLVSHD KS+++N+K+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245

Query: 244 FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWR 303
           +SV+I P+CREDL+CLP KVA  LGNLGPLV+CTKV++ I LLDP TLR  FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305

Query: 304 TSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHL 363
           + FRS LTSRQLV+Y V D+E    E  V G KY L+Y Q+AR SD G+   MF ++THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365

Query: 364 GHILNPGDYALGYDLYGANSNDMELEKYK---GLELPEAILIKKSYEEKRQRKRGKPRSW 423
           GHIL PGD ALGYD+YGAN ND E+EKY+      LPEAILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425

Query: 424 KLKSLAMDVDD-KSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITD 483
           KLKSL M++DD + +VD  K + EYE+FLRDLEENP+LRFNISLYR+++YQ SE   +TD
Sbjct: 426 KLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMTD 485

Query: 484 GEDGPSVPLDELLADLDLS 496
           GE  PSVP++ELLADLDLS
Sbjct: 486 GEGAPSVPIEELLADLDLS 501

[Close]

BLAST of MELO3C007816.2 vs. Swiss-Prot
Match: sp|Q6GNS3|NMD3_XENLA (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.6e-126
Identity = 224/488 (45.90%), Postives = 330/488 (67.62%), Query Frame = 0


Query: 15  GTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G +LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+L+ NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           +YVVQ  +C+ C R++A  D W A VQ+RQ V H++TF++LEQ ILKH    + +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ HG K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR  F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILN 374
           Q+ E++V+D E +      AG     +K++LA   V + S+       +  +THLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQ-QYHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  R+++R   R+WKLK +  D
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLKEMDRD 432

Query: 435 VDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDEL 494
            +     DE     +Y+ FL DLEE+  LR N+++++N        TD E  P + L E+
Sbjct: 433 REGMDTDDER----QYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLAEM 491

Query: 495 LADLDLSE 497
           L DL +S+
Sbjct: 493 LEDLHISQ 491

[Close]

BLAST of MELO3C007816.2 vs. Swiss-Prot
Match: sp|Q6P2Z6|NMD3_XENTR (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 3.4e-126
Identity = 226/501 (45.11%), Postives = 334/501 (66.67%), Query Frame = 0


Query: 15  GTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G +LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+L+ NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           +Y+VQ  +C+ C R++A  D W A VQ+RQ V H++TF++LEQ ILKH    + +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ H  K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR+ F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILN 374
           QL E++V+D + V      AG     +K++LA   V + S+       +  +THLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQ-QYHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  ++++R   R+WKLK +  D
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432

Query: 435 VDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDEL 494
            +     DE     +Y+ FL DLEE+  +R N+++Y+N        TD E  P + L E+
Sbjct: 433 REGMDTDDER----QYQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLAEM 492

Query: 495 LAD----LDLSEGEGDDAMNE 506
           L D    LD + GEG + + E
Sbjct: 493 LEDLHISLDATGGEGAEMLTE 504

[Close]

BLAST of MELO3C007816.2 vs. Swiss-Prot
Match: sp|Q08DS5|NMD3_BOVIN (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 4.6e-123
Identity = 225/504 (44.64%), Postives = 333/504 (66.07%), Query Frame = 0


Query: 10  VQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 70  WIKAQLESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 129
           W++  LES++LL  C+K+++  L+KV+LV A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 130 QSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAI 189
           Q +VV+YVVQ  +C  C R++A  D W A VQ+RQ   H++TF++LEQLILK+G   + +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEI 249
           RIK++  G+DF++S++ H  K VEF+    P R +  ++L+S D  SN +N+K TFSVEI
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 250 SPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRS 309
            PIC+++++CL PK+A SLGN+  + +C +VT+ I L+DP TL+   +D + +W   F S
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 310 LLTSRQLVEYVVLDIENVSTEVNVAGS-----KYMLAYAQVARVSDFGRNDTMFSIKTHL 369
           L   +QL E++V++   V      AG+     K+ L    V + S+    D  +  +THL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEM-NTDKQYFCRTHL 367

Query: 370 GHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLK 429
           GH+LNPGD  LG+DL   N ND  + K K   +P+ +LIKKSY+  R+++R   R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 430 SLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSV 489
            LA D ++    DE     +Y+ FL DLEE+  +R N+++YR+        TD E  P +
Sbjct: 428 ELARDRENTDTDDER----QYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRI 487

Query: 490 PLDELLADLDLSE----GEGDDAM 504
            L E+L DL +S+    GEG+  M
Sbjct: 488 SLAEMLEDLHISQDATGGEGESMM 502

[Close]

BLAST of MELO3C007816.2 vs. Swiss-Prot
Match: sp|Q5BLF0|NMD3_DANRE (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.0e-122
Identity = 226/502 (45.02%), Postives = 336/502 (66.93%), Query Frame = 0


Query: 15  GTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G +LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 75  LESKELLTFCIKRLR-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELL  C+K+L+ +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q + V
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 135 EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           E+VVQ  +CE C R++A  D W A VQ+RQ   H++TF++LEQLILKH    + +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
            +GIDF+++ + H  K V+F+    P RS+  ++L+SHD  SN +N+K TFSVEI P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++++CL P++A SLGN+G + +C +VT++I L+DP TL+   +D   +WR  F SL + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILN 374
           QL E++++DI+ +  +   AG     +K+ LA   V + S+   +   +  +T +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMD-SSHQYHCRTFMGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD 434
            GD  LG+D   AN ND  L K     +P+ +LIKKSY+   + KR + R WKLK +  +
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 435 VDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGED--GPSVPLD 494
            D     DE     +Y +FL DLEE+  LR NI+++R+    P E +D +D   P + L 
Sbjct: 433 KDAADTDDER----QYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLA 492

Query: 495 ELLADLDLSE---GEGDDAMNE 506
           E+L DL LS+   GEG D M +
Sbjct: 493 EMLEDLSLSDATGGEGADMMTD 505

[Close]

BLAST of MELO3C007816.2 vs. Swiss-Prot
Match: sp|Q55BF2|NMD3_DICDI (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 5.0e-122
Identity = 217/457 (47.48%), Postives = 317/457 (69.37%), Query Frame = 0


Query: 17  VLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLE 76
           +LCC CG+ +  N +NMCV C+ S+VDITEG+ KQLTI  C  C  YLQPP  W  A+LE
Sbjct: 12  ILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAELE 71

Query: 77  SKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYV 136
           S+ELLT CIKR++ LNKVKLV A +VWTEPHSKR+KVKL +QKEV   AIL+Q +++E++
Sbjct: 72  SRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEFI 131

Query: 137 VQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMDQG 196
           VQ   C+ C + +A  D W + VQLRQ V H+RTF ++EQLILKH A +  + IK+   G
Sbjct: 132 VQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPDG 191

Query: 197 IDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDL 256
           +DFFFSNR+H +KFVEF+  + P++++  +QL+S D ++N  N+K+TFSVEI P+ ++D+
Sbjct: 192 LDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDDI 251

Query: 257 ICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLV 316
           +CLPPK+A  LGN+GPLV+ TKV+N I  +DP TL    + A  +W + FR+L + +QLV
Sbjct: 252 VCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQLV 311

Query: 317 EYVVLDIENVSTEVNVAGS---KYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPGDYA 376
           E+ VLD       VN+ G+   +Y L+  Q+ R +DFG ND ++ I++HLG+ILNPGD A
Sbjct: 312 EFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDLA 371

Query: 377 LGYDLYGANSNDMELE-KYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMD-VDD 436
           LGYD+  +N  D +L    K  +LP+ +L+KK+Y  K   +    R W  K +  + +++
Sbjct: 372 LGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIEN 431

Query: 437 KSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNRE 469
             K + ++M  + E+FLR++E +P+LR  I++Y+  +
Sbjct: 432 PKKFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458

[Close]

BLAST of MELO3C007816.2 vs. TrEMBL
Match: tr|A0A1S3B197|A0A1S3B197_CUCME (60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 SV=1)

HSP 1 Score: 1014.6 bits (2622), Expect = 7.7e-293
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPLDELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of MELO3C007816.2 vs. TrEMBL
Match: tr|A0A0A0KGY6|A0A0A0KGY6_CUCSA (60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=3 SV=1)

HSP 1 Score: 1001.1 bits (2587), Expect = 8.8e-289
Identity = 497/505 (98.42%), Postives = 501/505 (99.21%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLF+VQQTIGTVLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480
           KLKSL+MDVDDK+KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLDELLADLDLSEGEGDDAMNE 506
           PSVPL+ELLADLDLSEGEGDDAMNE
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of MELO3C007816.2 vs. TrEMBL
Match: tr|A0A2H5NUK7|A0A2H5NUK7_CITUN (60S ribosomal export protein NMD3 OS=Citrus unshiu OX=55188 GN=CUMW_077410 PE=3 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 2.9e-247
Identity = 424/510 (83.14%), Postives = 470/510 (92.16%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+F V QT+G+VLCCKCGIPM PNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESKELLTFC+KRL+NLN+V+LV+AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYVVEYV QDH+C+SCSR+QANPDQWVA+VQLRQHV HRRTFF+LEQLILK
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           H AAA AIRI QMDQGIDFFF NRSH VKFVEFVGKVAP+RSRHDKQLVSHDPKSN  N+
Sbjct: 181 HDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           K+TFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWR+SF+SLLTSRQLVEY+VLD+E VS+EVNV GSKY+LA AQVARVSDFG+NDT+FSI+
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKRGKPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRGKPRSW 420

Query: 421 KLKSLAMDVDD-KSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITD 480
           KLKSL M+VDD K + D+ KMN EYE+FLRDLEENP+LRFN+SLYRN++YQPSE   +TD
Sbjct: 421 KLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNVSLYRNKDYQPSEMASVTD 480

Query: 481 GEDGPSVPLDELLADLDLS-EGEGDDAMNE 506
           GED PSVPLDELLADLDLS +GEG D+M E
Sbjct: 481 GEDVPSVPLDELLADLDLSDDGEGGDSMRE 510

[Close]

BLAST of MELO3C007816.2 vs. TrEMBL
Match: tr|V4S8T1|V4S8T1_9ROSI (60S ribosomal export protein NMD3 OS=Citrus clementina OX=85681 GN=CICLE_v10011515mg PE=3 SV=1)

HSP 1 Score: 862.1 bits (2226), Expect = 6.4e-247
Identity = 424/511 (82.97%), Postives = 469/511 (91.78%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+F V QT+G+VLCCKCGIPM PNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESKELLTFC+KRL+NLN+V+LV+AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYVVEYV QDH+C+SCSR+QANPDQWVA+VQLRQHV HRRTFF+LEQLILK
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           H AAA AIRIKQMDQGIDFFF NRSH VKFVEFVGKVAP+RSRHDKQLVSHDPKSN  N+
Sbjct: 181 HDAAARAIRIKQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           K+TFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDP TLRHCFLDADQ
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPLTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWR+SF+SLLTSRQLVEY+VLD+E VS+EVNV GSKY+LA AQVARVSDFG+NDT+FSI+
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKR KPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSW 420

Query: 421 KLKSLAMDVDD-KSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITD 480
           KLKSL M+VDD K + D+ KMN EYE+FLRDLEENP+LRFNISLYRN++YQPSE   +TD
Sbjct: 421 KLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQPSEMASVTD 480

Query: 481 GEDGPSVPLDELLADLDL--SEGEGDDAMNE 506
           GED PSVPLDELLADLDL   +GEGDD+M E
Sbjct: 481 GEDVPSVPLDELLADLDLKSDDGEGDDSMRE 511

[Close]

BLAST of MELO3C007816.2 vs. TrEMBL
Match: tr|A0A2P5BY24|A0A2P5BY24_9ROSA (60S ribosomal export protein NMD3 OS=Trema orientalis OX=63057 GN=TorRG33x02_304600 PE=3 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 8.3e-247
Identity = 417/505 (82.57%), Postives = 469/505 (92.87%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E G+F V QT+G+VLCCKCGIPM PNAANMCV+CL SEVDITEGLQK + I+HCP+C
Sbjct: 1   MAQEAGMFMVNQTVGSVLCCKCGIPMAPNAANMCVRCLRSEVDITEGLQKHVIIIHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           +SYLQPPRTWIKAQLESKELLTFC+KRL+NLNKV+LVHAEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DSYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVHAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GA+LEQSYVVE+V Q+H+CESC R+QANPDQWVA+VQLRQHV HRRTFF+LEQ+ILK
Sbjct: 121 VLNGAVLEQSYVVEFVQQEHMCESCMRVQANPDQWVAAVQLRQHVSHRRTFFYLEQMILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AI+IKQMDQGIDFFFSNRSHGVKFVEF+GKVAP+RSRHDKQLVSHDPKSN +N+
Sbjct: 181 HGAAAAAIKIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPVRSRHDKQLVSHDPKSNNYNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           K+TFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
           YWR SF+SLLTSRQLVEY+VLD+E V  EVNV G  Y LA AQVAR+SDFG+NDT+FSI+
Sbjct: 301 YWRVSFKSLLTSRQLVEYIVLDVEIVKPEVNVGG--YTLADAQVARLSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGD+ALGYDLY  NSNDMELEKYKGL LP+AIL+KKSYEEK QRKRGKPRSW
Sbjct: 361 THLGHLLNPGDHALGYDLYATNSNDMELEKYKGLVLPDAILVKKSYEEKLQRKRGKPRSW 420

Query: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEI---TDG 480
           KLKSL M+VDDK K ++ KMNSEYEQFL+DLEENPD+RFNISLYRN+EYQPSE+   TDG
Sbjct: 421 KLKSLNMEVDDKGKGEQEKMNSEYEQFLKDLEENPDMRFNISLYRNKEYQPSEVASMTDG 480

Query: 481 EDGPSVPLDELLADLDLSEGEGDDA 503
           ED PS+PL+E+LADLD+SE E  D+
Sbjct: 481 EDLPSIPLEEMLADLDISEDEDGDS 503

The following BLAST results are available for this feature:

BLAST of MELO3C007816.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440695.1	1.2e-292	100.00	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo]	[more]
XP_004143504.1	1.3e-288	98.42	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypot...	[more]
XP_022149109.1	1.4e-274	92.87	60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribo...	[more]
XP_022950672.1	9.6e-271	93.70	60S ribosomal export protein NMD3-like [Cucurbita moschata]	[more]
XP_023544705.1	9.6e-271	93.70	60S ribosomal export protein NMD3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C007816.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03820.1	1.4e-202	70.14	nonsense-mediated mRNA decay NMD3 family protein	[more]

BLAST of MELO3C007816.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6GNS3\|NMD3_XENLA	2.6e-126	45.90	60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1	[more]
sp\|Q6P2Z6\|NMD3_XENTR	3.4e-126	45.11	60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=...	[more]
sp\|Q08DS5\|NMD3_BOVIN	4.6e-123	44.64	60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1	[more]
sp\|Q5BLF0\|NMD3_DANRE	1.0e-122	45.02	60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1	[more]
sp\|Q55BF2\|NMD3_DICDI	5.0e-122	47.48	60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P...	[more]

BLAST of MELO3C007816.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B197\|A0A1S3B197_CUCME	7.7e-293	100.00	60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 S...	[more]
tr\|A0A0A0KGY6\|A0A0A0KGY6_CUCSA	8.8e-289	98.42	60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=...	[more]
tr\|A0A2H5NUK7\|A0A2H5NUK7_CITUN	2.9e-247	83.14	60S ribosomal export protein NMD3 OS=Citrus unshiu OX=55188 GN=CUMW_077410 PE=3 ...	[more]
tr\|V4S8T1\|V4S8T1_9ROSI	6.4e-247	82.97	60S ribosomal export protein NMD3 OS=Citrus clementina OX=85681 GN=CICLE_v100115...	[more]
tr\|A0A2P5BY24\|A0A2P5BY24_9ROSA	8.3e-247	82.57	60S ribosomal export protein NMD3 OS=Trema orientalis OX=63057 GN=TorRG33x02_304...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007064	NMD3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007816.2.1	MELO3C007816.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007064	NMD3	PFAM	PF04981	NMD3	coord: 19..248 e-value: 3.8E-73 score: 245.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..505
None	No IPR available	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 4..503

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007816.2	Csa6G502070	Cucumber (Chinese Long) v2	cumedB483
MELO3C007816.2	CSPI06G30870	Wild cucumber (PI 183967)	cpimedB493
MELO3C007816.2	Cucsa.127340	Cucumber (Gy14) v1	cgymedB200
MELO3C007816.2	CmaCh03G007610	Cucurbita maxima (Rimu)	cmamedB703
MELO3C007816.2	CmoCh03G007900	Cucurbita moschata (Rifu)	cmomedB694
MELO3C007816.2	Lsi01G006890	Bottle gourd (USVL1VR-Ls)	lsimedB163
MELO3C007816.2	Cp4.1LG10g00860	Cucurbita pepo (Zucchini)	cpemedB080
MELO3C007816.2	Cla014199	Watermelon (97103) v1	medwmB559
MELO3C007816.2	ClCG01G019420	Watermelon (Charleston Gray)	medwcgB509
MELO3C007816.2	Cla97C01G018820	Watermelon (97103) v2	medwmbB505
MELO3C007816.2	Bhi03G000992	Wax gourd	medwgoB642
MELO3C007816.2	Carg00656	Silver-seed gourd	carmedB0418
MELO3C007816.2	CsaV3_6G046130	Cucumber (Chinese Long) v3	cucmedB505

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007816.2	Cucumber (Gy14) v2	cgybmedB129
MELO3C007816.2	Cucumber (Gy14) v2	cgybmedB440
MELO3C007816.2	Cucumber (Gy14) v1	cgymedB391
MELO3C007816.2	Cucurbita maxima (Rimu)	cmamedB048
MELO3C007816.2	Cucurbita maxima (Rimu)	cmamedB518
MELO3C007816.2	Cucurbita maxima (Rimu)	cmamedB907
MELO3C007816.2	Cucurbita moschata (Rifu)	cmomedB039
MELO3C007816.2	Cucurbita moschata (Rifu)	cmomedB193
MELO3C007816.2	Cucurbita moschata (Rifu)	cmomedB506
MELO3C007816.2	Cucurbita moschata (Rifu)	cmomedB896
MELO3C007816.2	Cucurbita pepo (Zucchini)	cpemedB510
MELO3C007816.2	Cucurbita pepo (Zucchini)	cpemedB531
MELO3C007816.2	Cucurbita pepo (Zucchini)	cpemedB649
MELO3C007816.2	Cucurbita pepo (Zucchini)	cpemedB926
MELO3C007816.2	Wild cucumber (PI 183967)	cpimedB144
MELO3C007816.2	Cucumber (Chinese Long) v2	cumedB143
MELO3C007816.2	Melon (DHL92) v3.6.1	medmedB131
MELO3C007816.2	Bottle gourd (USVL1VR-Ls)	lsimedB478
MELO3C007816.2	Bottle gourd (USVL1VR-Ls)	lsimedB512
MELO3C007816.2	Watermelon (Charleston Gray)	medwcgB545
MELO3C007816.2	Watermelon (97103) v1	medwmB548
MELO3C007816.2	Silver-seed gourd	carmedB0766
MELO3C007816.2	Silver-seed gourd	carmedB0935
MELO3C007816.2	Silver-seed gourd	carmedB0966
MELO3C007816.2	Cucumber (Chinese Long) v3	cucmedB145
MELO3C007816.2	Watermelon (97103) v2	medwmbB551