Cla97C01G018820 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G018820
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	60S ribosomal export protein NMD3
Location	Cla97Chr01 : 31969261 .. 31970778 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCTGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGATTGTGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCGCAATTAGAATCAAAGGAACTACTGACATTCTGTATCAAAAGGTTAAAAAATTTGAATAAAGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTAAAGTTGAAGGTCCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCGTATGTTGTGGAGTATGTTGTACAAGATCATTTGTGTGAGTCTTGCTCGAGGGTCCAGGCCAACCCTGACCAGTGGGTGGCTTCCGTTCAACTCAGGCAACATGTCCCTCACCGCCGTACATTTTTCTTCTTGGAACAACTGATACTAAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAACAGATGGATCAAGGTATTGACTTCTTTTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTTATCGGAAAGGTTGCTCCAATTAGGAGCCGCCACGATAAACAACTTGTTTCTCATGATCCTAAGAGTAATATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGTCCTCTTGTGATTTGCACCAAAGTTACAAATGCTATTGCGTTACTTGATCCATTCACCTTAAGGCACTGCTTCTTAGATGCTGATCAGTATTGGAGGACATCCTTTAGGTCTCTACTTACTAGCAGGCAACTTGTTGAATATGTTGTATTGGATATAGAGAATGTTTCTACTGAAGTCAATGTTGCTGGTTCCAAGTATATATTGGCCTATGCTCAAGTAGCTCGCTTATCAGATTTTGGAAGGAATGACACAATATTCTCCATAAAAACCCATCTAGGTCATATTTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAATGATATGGAGCTCGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCAATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGAAAGCCTCGATCATGGAAGCTTAAATCTCTTGAAATGGATGTTGACGATAAAGGCAAAGCAGATGAAGATAAGACGAACTCCGAGTATGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATATCATTGTACCGAAATAGAGAATACCAACCATCTGAAATGACTGATGGAGAAGATGGACCTTCAGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGGGACGATAGCATGAATGAGTAA

mRNA sequence

ATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCTGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGATTGTGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCGCAATTAGAATCAAAGGAACTACTGACATTCTGTATCAAAAGGTTAAAAAATTTGAATAAAGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTAAAGTTGAAGGTCCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCGTATGTTGTGGAGTATGTTGTACAAGATCATTTGTGTGAGTCTTGCTCGAGGGTCCAGGCCAACCCTGACCAGTGGGTGGCTTCCGTTCAACTCAGGCAACATGTCCCTCACCGCCGTACATTTTTCTTCTTGGAACAACTGATACTAAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAACAGATGGATCAAGGTATTGACTTCTTTTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTTATCGGAAAGGTTGCTCCAATTAGGAGCCGCCACGATAAACAACTTGTTTCTCATGATCCTAAGAGTAATATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGTCCTCTTGTGATTTGCACCAAAGTTACAAATGCTATTGCGTTACTTGATCCATTCACCTTAAGGCACTGCTTCTTAGATGCTGATCAGTATTGGAGGACATCCTTTAGGTCTCTACTTACTAGCAGGCAACTTGTTGAATATGTTGTATTGGATATAGAGAATGTTTCTACTGAAGTCAATGTTGCTGGTTCCAAGTATATATTGGCCTATGCTCAAGTAGCTCGCTTATCAGATTTTGGAAGGAATGACACAATATTCTCCATAAAAACCCATCTAGGTCATATTTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAATGATATGGAGCTCGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCAATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGAAAGCCTCGATCATGGAAGCTTAAATCTCTTGAAATGGATGTTGACGATAAAGGCAAAGCAGATGAAGATAAGACGAACTCCGAGTATGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATATCATTGTACCGAAATAGAGAATACCAACCATCTGAAATGACTGATGGAGAAGATGGACCTTCAGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGGGACGATAGCATGAATGAGTAA

Coding sequence (CDS)

ATGGCTGCAGAAACAGGATTGTTTGCTGTTCAACAGACCATTGGCAGTGTCTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGCTTGTGTTCTGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATCATGCATTGTCCGGATTGTGAGAGTTACTTGCAGCCACCCCGAACTTGGATTAAAGCGCAATTAGAATCAAAGGAACTACTGACATTCTGTATCAAAAGGTTAAAAAATTTGAATAAAGTTAAACTGGTACATGCTGAATTTGTTTGGACTGAACCCCATTCCAAAAGGATCAAGGTAAAGTTGAAGGTCCAGAAAGAAGTCTTACATGGAGCAATTTTGGAACAGTCGTATGTTGTGGAGTATGTTGTACAAGATCATTTGTGTGAGTCTTGCTCGAGGGTCCAGGCCAACCCTGACCAGTGGGTGGCTTCCGTTCAACTCAGGCAACATGTCCCTCACCGCCGTACATTTTTCTTCTTGGAACAACTGATACTAAAGCATGGTGCTGCTGCCAGTGCCATAAGGATCAAACAGATGGATCAAGGTATTGACTTCTTTTTTTCTAATAGGAGTCATGGTGTAAAGTTTGTGGAATTTATCGGAAAGGTTGCTCCAATTAGGAGCCGCCACGATAAACAACTTGTTTCTCATGATCCTAAGAGTAATATTCACAACCATAAGCACACTTTCTCTGTTGAAATATCCCCAATATGCCGTGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTAGGCAATCTTGGTCCTCTTGTGATTTGCACCAAAGTTACAAATGCTATTGCGTTACTTGATCCATTCACCTTAAGGCACTGCTTCTTAGATGCTGATCAGTATTGGAGGACATCCTTTAGGTCTCTACTTACTAGCAGGCAACTTGTTGAATATGTTGTATTGGATATAGAGAATGTTTCTACTGAAGTCAATGTTGCTGGTTCCAAGTATATATTGGCCTATGCTCAAGTAGCTCGCTTATCAGATTTTGGAAGGAATGACACAATATTCTCCATAAAAACCCATCTAGGTCATATTTTGAACCCTGGGGATTATGCTCTTGGTTATGATCTTTATGGAGCCAATAGTAATGATATGGAGCTCGAAAAATATAAGGGTCTTGAGCTTCCAGAAGCAATTTTAATCAAGAAGAGTTACGAAGAAAAGCGTCAGAGAAAGCGTGGAAAGCCTCGATCATGGAAGCTTAAATCTCTTGAAATGGATGTTGACGATAAAGGCAAAGCAGATGAAGATAAGACGAACTCCGAGTATGAACAATTTTTGAGAGATCTGGAGGAGAATCCAGATTTGAGGTTCAACATATCATTGTACCGAAATAGAGAATACCAACCATCTGAAATGACTGATGGAGAAGATGGACCTTCAGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGAAGGGGAGGGGGACGATAGCATGAATGAGTAA

Protein sequence

MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEELLADLDLSEGEGDDSMNE

Homology

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BLAST of Cla97C01G018820 vs. NCBI nr
Match: XP_008440695.1 (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo])

HSP 1 Score: 989.9 bits (2558), Expect = 3.1e-285
Identity = 489/505 (96.83%), Postives = 500/505 (99.01%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKY+LAYAQVAR+SDFGRNDT+FSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSL MDVDDK K DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLEELLADLDLSEGEGDDSMNE 506
           PSVPL+ELLADLDLSEGEGDD+MNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

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BLAST of Cla97C01G018820 vs. NCBI nr
Match: XP_004143504.1 (PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypothetical protein Csa_6G502070 [Cucumis sativus])

HSP 1 Score: 984.6 bits (2544), Expect = 1.3e-283
Identity = 487/505 (96.44%), Postives = 498/505 (98.61%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLF+VQQTIG+VLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKY+LAYAQVAR+SDFGRNDT+FSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSL MDVDDK K DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLEELLADLDLSEGEGDDSMNE 506
           PSVPLEELLADLDLSEGEGDD+MNE
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

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BLAST of Cla97C01G018820 vs. NCBI nr
Match: XP_022149109.1 (60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149123.1 60S ribosomal export protein NMD3 [Momordica charantia])

HSP 1 Score: 961.8 bits (2485), Expect = 8.9e-277
Identity = 474/505 (93.86%), Postives = 490/505 (97.03%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYV EYVVQDH+CESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLNGAILEQSYVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEI PICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEY++LDIENVS EVNV GSKY+LA AQVAR+SDFGRNDTIFSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGL LPEAIL+KKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSL+MDVDDKG+ D+DK NSEYEQFLRDLEENPDLRFNISLYRNREYQ SEMTDGEDG
Sbjct: 421 KLKSLDMDVDDKGRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGEDG 480

Query: 481 PSVPLEELLADLDLSEGEGDDSMNE 506
           PSVPLEELLADLDLSE + DD MNE
Sbjct: 481 PSVPLEELLADLDLSEQDEDDGMNE 505

[Close]

BLAST of Cla97C01G018820 vs. NCBI nr
Match: XP_022950672.1 (60S ribosomal export protein NMD3-like [Cucurbita moschata])

HSP 1 Score: 954.1 bits (2465), Expect = 1.9e-274
Identity = 471/492 (95.73%), Postives = 484/492 (98.37%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKY+LAYAQVAR+SDFGRNDTIFSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSLEMDVDD+G+ADEDK NSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 481 PSVPLEELLADL 493
           PSVPLEELLADL
Sbjct: 481 PSVPLEELLADL 492

[Close]

BLAST of Cla97C01G018820 vs. NCBI nr
Match: XP_023544705.1 (60S ribosomal export protein NMD3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 954.1 bits (2465), Expect = 1.9e-274
Identity = 471/492 (95.73%), Postives = 484/492 (98.37%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E GLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLR+CFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKY+LAYAQVAR+SDFGRNDTIFSI+
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGLELPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSLEMDVDD+G+ADEDK NSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG
Sbjct: 421 KLKSLEMDVDDRGRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480

Query: 481 PSVPLEELLADL 493
           PSVPLEELLADL
Sbjct: 481 PSVPLEELLADL 492

[Close]

BLAST of Cla97C01G018820 vs. TrEMBL
Match: tr|A0A1S3B197|A0A1S3B197_CUCME (60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 SV=1)

HSP 1 Score: 989.9 bits (2558), Expect = 2.0e-285
Identity = 489/505 (96.83%), Postives = 500/505 (99.01%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLFAVQQTIG+VLCCKCGIPM PNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFAVQQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKY+LAYAQVAR+SDFGRNDT+FSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSL MDVDDK K DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLAMDVDDKSKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLEELLADLDLSEGEGDDSMNE 506
           PSVPL+ELLADLDLSEGEGDD+MNE
Sbjct: 481 PSVPLDELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cla97C01G018820 vs. TrEMBL
Match: tr|A0A0A0KGY6|A0A0A0KGY6_CUCSA (60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=3 SV=1)

HSP 1 Score: 984.6 bits (2544), Expect = 8.5e-284
Identity = 487/505 (96.44%), Postives = 498/505 (98.61%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAAETGLF+VQQTIG+VLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL GAILEQSYV EYVVQDHLCESCSR+QANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNH
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKY+LAYAQVAR+SDFGRNDT+FSIK
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRK GKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKHGKPRSW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDG 480
           KLKSL MDVDDK K DE+K NSEYEQFLRDLEENPDLRFNISLYRNREYQPSE+TDGEDG
Sbjct: 421 KLKSLSMDVDDKTKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDG 480

Query: 481 PSVPLEELLADLDLSEGEGDDSMNE 506
           PSVPLEELLADLDLSEGEGDD+MNE
Sbjct: 481 PSVPLEELLADLDLSEGEGDDAMNE 505

[Close]

BLAST of Cla97C01G018820 vs. TrEMBL
Match: tr|A0A2P5BY24|A0A2P5BY24_9ROSA (60S ribosomal export protein NMD3 OS=Trema orientalis OX=63057 GN=TorRG33x02_304600 PE=3 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 4.7e-250
Identity = 427/505 (84.55%), Postives = 471/505 (93.27%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA E G+F V QT+GSVLCCKCGIPMAPNAANMCV+CL SEVDITEGLQK + I+HCP+C
Sbjct: 1   MAQEAGMFMVNQTVGSVLCCKCGIPMAPNAANMCVRCLRSEVDITEGLQKHVIIIHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           +SYLQPPRTWIKAQLESKELLTFC+KRLKNLNKV+LVHAEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DSYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVHAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GA+LEQSYVVE+V Q+H+CESC RVQANPDQWVA+VQLRQHV HRRTFF+LEQ+ILK
Sbjct: 121 VLNGAVLEQSYVVEFVQQEHMCESCMRVQANPDQWVAAVQLRQHVSHRRTFFYLEQMILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           HGAAA+AI+IKQMDQGIDFFFSNRSHGVKFVEFIGKVAP+RSRHDKQLVSHDPKSN +N+
Sbjct: 181 HGAAAAAIKIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPVRSRHDKQLVSHDPKSNNYNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           K+TFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWR SF+SLLTSRQLVEY+VLD+E V  EVNV G  Y LA AQVARLSDFG+NDTIFSI+
Sbjct: 301 YWRVSFKSLLTSRQLVEYIVLDVEIVKPEVNVGG--YTLADAQVARLSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGD+ALGYDLY  NSNDMELEKYKGL LP+AIL+KKSYEEK QRKRGKPRSW
Sbjct: 361 THLGHLLNPGDHALGYDLYATNSNDMELEKYKGLVLPDAILVKKSYEEKLQRKRGKPRSW 420

Query: 421 KLKSLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MTDG 480
           KLKSL M+VDDKGK +++K NSEYEQFL+DLEENPD+RFNISLYRN+EYQPSE   MTDG
Sbjct: 421 KLKSLNMEVDDKGKGEQEKMNSEYEQFLKDLEENPDMRFNISLYRNKEYQPSEVASMTDG 480

Query: 481 EDGPSVPLEELLADLDLSEGEGDDS 503
           ED PS+PLEE+LADLD+SE E  DS
Sbjct: 481 EDLPSIPLEEMLADLDISEDEDGDS 503

[Close]

BLAST of Cla97C01G018820 vs. TrEMBL
Match: tr|A0A2H5NUK7|A0A2H5NUK7_CITUN (60S ribosomal export protein NMD3 OS=Citrus unshiu OX=55188 GN=CUMW_077410 PE=3 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 6.8e-249
Identity = 428/510 (83.92%), Postives = 473/510 (92.75%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+F V QT+GSVLCCKCGIPMAPNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESKELLTFC+KRLKNLN+V+LV+AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYVVEYV QDH+C+SCSRVQANPDQWVA+VQLRQHV HRRTFF+LEQLILK
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           H AAA AIRI QMDQGIDFFF NRSH VKFVEF+GKVAP+RSRHDKQLVSHDPKSN  N+
Sbjct: 181 HDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           K+TFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDPFTLRHCFLDADQ
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWR+SF+SLLTSRQLVEY+VLD+E VS+EVNV GSKY+LA AQVAR+SDFG+NDTIFSI+
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKRGKPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRGKPRSW 420

Query: 421 KLKSLEMDVDD-KGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEM---TD 480
           KLKSL+M+VDD KG+ D++K N EYE+FLRDLEENP+LRFN+SLYRN++YQPSEM   TD
Sbjct: 421 KLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNVSLYRNKDYQPSEMASVTD 480

Query: 481 GEDGPSVPLEELLADLDLS-EGEGDDSMNE 506
           GED PSVPL+ELLADLDLS +GEG DSM E
Sbjct: 481 GEDVPSVPLDELLADLDLSDDGEGGDSMRE 510

[Close]

BLAST of Cla97C01G018820 vs. TrEMBL
Match: tr|V4S8T1|V4S8T1_9ROSI (60S ribosomal export protein NMD3 OS=Citrus clementina OX=85681 GN=CICLE_v10011515mg PE=3 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 1.5e-248
Identity = 428/511 (83.76%), Postives = 472/511 (92.37%), Query Frame = 0


Query: 1   MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA + G+F V QT+GSVLCCKCGIPMAPNAANMCV CL SEVDITEGLQK + I HCP+C
Sbjct: 1   MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
           + YLQPPRTWIKAQLESKELLTFC+KRLKNLN+V+LV+AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61  DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYVVEYV QDH+C+SCSRVQANPDQWVA+VQLRQHV HRRTFF+LEQLILK
Sbjct: 121 VLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILK 180

Query: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNH 240
           H AAA AIRIKQMDQGIDFFF NRSH VKFVEF+GKVAP+RSRHDKQLVSHDPKSN  N+
Sbjct: 181 HDAAARAIRIKQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNY 240

Query: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
           K+TFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTN+IALLDP TLRHCFLDADQ
Sbjct: 241 KYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPLTLRHCFLDADQ 300

Query: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIK 360
           YWR+SF+SLLTSRQLVEY+VLD+E VS+EVNV GSKY+LA AQVAR+SDFG+NDTIFSI+
Sbjct: 301 YWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGH+LNPGDYALGYDLY AN+NDMEL+KYKGL LPE ILIKKSYEEKR RKR KPRSW
Sbjct: 361 THLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSW 420

Query: 421 KLKSLEMDVDD-KGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEM---TD 480
           KLKSL+M+VDD KG+ D++K N EYE+FLRDLEENP+LRFNISLYRN++YQPSEM   TD
Sbjct: 421 KLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQPSEMASVTD 480

Query: 481 GEDGPSVPLEELLADLDL--SEGEGDDSMNE 506
           GED PSVPL+ELLADLDL   +GEGDDSM E
Sbjct: 481 GEDVPSVPLDELLADLDLKSDDGEGDDSMRE 511

[Close]

BLAST of Cla97C01G018820 vs. Swiss-Prot
Match: sp|Q6GNS3|NMD3_XENLA (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.3e-127
Identity = 229/488 (46.93%), Postives = 335/488 (68.65%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           +YVVQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    + +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ HG K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR  F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYILAYAQVARLSDFGRNDTIFSIKTHLGHILN 374
           Q+ E++V+D E +      AG     +K++LA   V + S+       +  +THLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  R+++R   R+WKLK  EMD
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLK--EMD 432

Query: 435 VDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 494
            D +G   +D+   +Y+ FL DLEE+  LR N+++++N        TD E  P + L E+
Sbjct: 433 RDREGMDTDDE--RQYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLAEM 491

Query: 495 LADLDLSE 497
           L DL +S+
Sbjct: 493 LEDLHISQ 491

[Close]

BLAST of Cla97C01G018820 vs. Swiss-Prot
Match: sp|Q6P2Z6|NMD3_XENTR (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.1e-127
Identity = 230/501 (45.91%), Postives = 336/501 (67.07%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           +Y+VQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    + +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
             G+DF+++++ H  K VEF+    P R +  ++L+SHD  +N +N+K TFSVEI P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+ I L+DP TL+   +D + YWR+ F SL   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYILAYAQVARLSDFGRNDTIFSIKTHLGHILN 374
           QL E++V+D + V      AG     +K+ILA   V + S+       +  +THLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  ++++R   R+WKLK +E D
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432

Query: 435 VDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 494
            +     DE     +Y+ FL DLEE+  +R N+++Y+N        TD E  P + L E+
Sbjct: 433 REGMDTDDE----RQYQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLAEM 492

Query: 495 LAD----LDLSEGEGDDSMNE 506
           L D    LD + GEG + + E
Sbjct: 493 LEDLHISLDATGGEGAEMLTE 504

[Close]

BLAST of Cla97C01G018820 vs. Swiss-Prot
Match: sp|Q5BLF0|NMD3_DANRE (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.7e-123
Identity = 228/502 (45.42%), Postives = 338/502 (67.33%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELL  C+K+LK +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q + V
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQM 194
           E+VVQ  +CE C RV+A  D W A VQ+RQ   H++TF++LEQLILKH    + +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICR 254
            +GIDF+++ + H  K V+F+    P RS+  ++L+SHD  SN +N+K TFSVEI P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSR 314
           ++++CL P++A SLGN+G + +C +VT++I L+DP TL+   +D   +WR  F SL + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 315 QLVEYVVLDIENVSTEVNVAG-----SKYILAYAQVARLSDFGRNDTIFSIKTHLGHILN 374
           QL E++++DI+ +  +   AG     +K+ LA   V + S+   +   +  +T +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLN 372

Query: 375 PGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD 434
            GD  LG+D   AN ND  L K     +P+ +LIKKSY+   + KR + R WKLK ++ +
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 435 VDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGED--GPSVPLE 494
            D     DE     +Y +FL DLEE+  LR NI+++R+    P E +D +D   P + L 
Sbjct: 433 KDAADTDDE----RQYTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLA 492

Query: 495 ELLADLDLSE---GEGDDSMNE 506
           E+L DL LS+   GEG D M +
Sbjct: 493 EMLEDLSLSDATGGEGADMMTD 505

[Close]

BLAST of Cla97C01G018820 vs. Swiss-Prot
Match: sp|Q08DS5|NMD3_BOVIN (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 3.0e-122
Identity = 226/504 (44.84%), Postives = 332/504 (65.87%), Query Frame = 0


Query: 10  VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 70  WIKAQLESKELLTFCIKRLK-NLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 129
           W++  LES++LL  C+K++K  L+KV+LV A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 130 QSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAI 189
           Q +VV+YVVQ  +C  C RV+A  D W A VQ+RQ   H++TF++LEQLILK+G   + +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEI 249
           RIK++  G+DF++S++ H  K VEF+    P R +  ++L+S D  SN +N+K TFSVEI
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 250 SPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRS 309
            PIC+++++CL PK+A SLGN+  + +C +VT+ I L+DP TL+   +D + +W   F S
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 310 LLTSRQLVEYVVLDIENVSTEVNVAGS-----KYILAYAQVARLSDFGRNDTIFSIKTHL 369
           L   +QL E++V++   V      AG+     K+ L    V + S+    D  +  +THL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEM-NTDKQYFCRTHL 367

Query: 370 GHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLK 429
           GH+LNPGD  LG+DL   N ND  + K K   +P+ +LIKKSY+  R+++R   R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 430 SLEMDVDDKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSV 489
            L  D ++    DE     +Y+ FL DLEE+  +R N+++YR+        TD E  P +
Sbjct: 428 ELARDRENTDTDDE----RQYQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRI 487

Query: 490 PLEELLADLDLSE----GEGDDSM 504
            L E+L DL +S+    GEG+  M
Sbjct: 488 SLAEMLEDLHISQDATGGEGESMM 502

[Close]

BLAST of Cla97C01G018820 vs. Swiss-Prot
Match: sp|Q55BF2|NMD3_DICDI (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 6.6e-122
Identity = 220/458 (48.03%), Postives = 317/458 (69.21%), Query Frame = 0


Query: 16  SVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQL 75
           ++LCC CG+ +  N +NMCV C+ S+VDITEG+ KQLTI  C  C  YLQPP  W  A+L
Sbjct: 11  NILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAEL 70

Query: 76  ESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEY 135
           ES+ELLT CIKR+K LNKVKLV A +VWTEPHSKR+KVKL +QKEV   AIL+Q +++E+
Sbjct: 71  ESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEF 130

Query: 136 VVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMDQ 195
           +VQ   C+ C + +A  D W + VQLRQ V H+RTF ++EQLILKH A +  + IK+   
Sbjct: 131 IVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPD 190

Query: 196 GIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICRED 255
           G+DFFFSNR+H +KFVEFI  + P++++  +QL+S D ++N  N+K+TFSVEI P+ ++D
Sbjct: 191 GLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDD 250

Query: 256 LICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQL 315
           ++CLPPK+A  LGN+GPLV+ TKV+N I  +DP TL    + A  +W + FR+L + +QL
Sbjct: 251 IVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQL 310

Query: 316 VEYVVLDIENVSTEVNVAGS---KYILAYAQVARLSDFGRNDTIFSIKTHLGHILNPGDY 375
           VE+ VLD       VN+ G+   +Y L+  Q+ R +DFG ND I+ I++HLG+ILNPGD 
Sbjct: 311 VEFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDL 370

Query: 376 ALGYDLYGANSNDMELE-KYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMD-VD 435
           ALGYD+  +N  D +L    K  +LP+ +L+KK+Y  K   +    R W  K +  + ++
Sbjct: 371 ALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIE 430

Query: 436 DKGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNRE 469
           +  K + D+   + E+FLR++E +P+LR  I++Y+  +
Sbjct: 431 NPKKFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458

[Close]

BLAST of Cla97C01G018820 vs. TAIR10
Match: AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein)

HSP 1 Score: 709.5 bits (1830), Expect = 1.4e-204
Identity = 355/499 (71.14%), Postives = 416/499 (83.37%), Query Frame = 0


Query: 4   ETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
           E+G+F VQQTIGSVLCCKCG+PMAPNAANMCV CL SEVDITEGLQK + I +CP+C  Y
Sbjct: 6   ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65

Query: 64  LQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLH 123
           LQPP+TWIK Q ESKELLTFCIKRLKNLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66  LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125

Query: 124 GAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183
           GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV HRRTFF+LEQLIL+H A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185

Query: 184 AASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243
           A+ AIRI+Q+DQGIDFFF N+SH   FVEF+ KV PI  R D+QLVSHD KS+++N+K+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245

Query: 244 FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWR 303
           +SV+I P+CREDL+CLP KVA  LGNLGPLV+CTKV++ I LLDP TLR  FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305

Query: 304 TSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYILAYAQVARLSDFGRNDTIFSIKTHL 363
           + FRS LTSRQLV+Y V D+E    E  V G KY L+Y Q+AR SD G+   +F ++THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365

Query: 364 GHILNPGDYALGYDLYGANSNDMELEKYK---GLELPEAILIKKSYEEKRQRKRGKPRSW 423
           GHIL PGD ALGYD+YGAN ND E+EKY+      LPEAILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425

Query: 424 KLKSLEMDVDD-KGKADEDKTNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MTD 483
           KLKSL M++DD +G+ D +KT+ EYE+FLRDLEENP+LRFNISLYR+++YQ SE   MTD
Sbjct: 426 KLKSLPMEMDDSRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMTD 485

Query: 484 GEDGPSVPLEELLADLDLS 496
           GE  PSVP+EELLADLDLS
Sbjct: 486 GEGAPSVPIEELLADLDLS 501

The following BLAST results are available for this feature:

BLAST of Cla97C01G018820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440695.1	3.1e-285	96.83	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo]	[more]
XP_004143504.1	1.3e-283	96.44	PREDICTED: 60S ribosomal export protein NMD3 [Cucumis sativus] >KGN48818.1 hypot...	[more]
XP_022149109.1	8.9e-277	93.86	60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribo...	[more]
XP_022950672.1	1.9e-274	95.73	60S ribosomal export protein NMD3-like [Cucurbita moschata]	[more]
XP_023544705.1	1.9e-274	95.73	60S ribosomal export protein NMD3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G018820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B197\|A0A1S3B197_CUCME	2.0e-285	96.83	60S ribosomal export protein NMD3 OS=Cucumis melo OX=3656 GN=LOC103485035 PE=3 S...	[more]
tr\|A0A0A0KGY6\|A0A0A0KGY6_CUCSA	8.5e-284	96.44	60S ribosomal export protein NMD3 OS=Cucumis sativus OX=3659 GN=Csa_6G502070 PE=...	[more]
tr\|A0A2P5BY24\|A0A2P5BY24_9ROSA	4.7e-250	84.55	60S ribosomal export protein NMD3 OS=Trema orientalis OX=63057 GN=TorRG33x02_304...	[more]
tr\|A0A2H5NUK7\|A0A2H5NUK7_CITUN	6.8e-249	83.92	60S ribosomal export protein NMD3 OS=Citrus unshiu OX=55188 GN=CUMW_077410 PE=3 ...	[more]
tr\|V4S8T1\|V4S8T1_9ROSI	1.5e-248	83.76	60S ribosomal export protein NMD3 OS=Citrus clementina OX=85681 GN=CICLE_v100115...	[more]

BLAST of Cla97C01G018820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6GNS3\|NMD3_XENLA	2.3e-127	46.93	60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1	[more]
sp\|Q6P2Z6\|NMD3_XENTR	3.1e-127	45.91	60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=...	[more]
sp\|Q5BLF0\|NMD3_DANRE	2.7e-123	45.42	60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1	[more]
sp\|Q08DS5\|NMD3_BOVIN	3.0e-122	44.84	60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1	[more]
sp\|Q55BF2\|NMD3_DICDI	6.6e-122	48.03	60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P...	[more]

BLAST of Cla97C01G018820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03820.1	1.4e-204	71.14	nonsense-mediated mRNA decay NMD3 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007064	NMD3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0008150	biological_process
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043023	ribosomal large subunit binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G018820.1	Cla97C01G018820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007064	NMD3	PFAM	PF04981	NMD3	coord: 19..248 e-value: 2.1E-73 score: 246.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 491..505
None	No IPR available	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 4..503

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G018820	Cla014199	Watermelon (97103) v1	wmwmbB234
Cla97C01G018820	Csa6G502070	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G018820	MELO3C007816	Melon (DHL92) v3.5.1	mewmbB513
Cla97C01G018820	ClCG01G019420	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G018820	CSPI06G30870	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G018820	Cucsa.127340	Cucumber (Gy14) v1	cgywmbB203
Cla97C01G018820	CmaCh03G007610	Cucurbita maxima (Rimu)	cmawmbB670
Cla97C01G018820	CmoCh03G007900	Cucurbita moschata (Rifu)	cmowmbB642
Cla97C01G018820	Lsi01G006890	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G018820	MELO3C007816.2	Melon (DHL92) v3.6.1	medwmbB505
Cla97C01G018820	Carg00656	Silver-seed gourd	carwmbB0426
Cla97C01G018820	CsaV3_6G046130	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G018820	Bhi03G000992	Wax gourd	wgowmbB398

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G018820	Watermelon (97103) v2	wmbwmbB042
Cla97C01G018820	Silver-seed gourd	carwmbB0105
Cla97C01G018820	Silver-seed gourd	carwmbB0791
Cla97C01G018820	Silver-seed gourd	carwmbB0987
Cla97C01G018820	Silver-seed gourd	carwmbB0992
Cla97C01G018820	Silver-seed gourd	carwmbB1027
Cla97C01G018820	Silver-seed gourd	carwmbB1073
Cla97C01G018820	Cucumber (Gy14) v2	cgybwmbB089
Cla97C01G018820	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G018820	Cucumber (Gy14) v1	cgywmbB407
Cla97C01G018820	Cucurbita maxima (Rimu)	cmawmbB015
Cla97C01G018820	Cucurbita maxima (Rimu)	cmawmbB440
Cla97C01G018820	Cucurbita maxima (Rimu)	cmawmbB712
Cla97C01G018820	Cucurbita moschata (Rifu)	cmowmbB002
Cla97C01G018820	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G018820	Cucurbita moschata (Rifu)	cmowmbB148
Cla97C01G018820	Cucurbita moschata (Rifu)	cmowmbB420
Cla97C01G018820	Cucurbita moschata (Rifu)	cmowmbB682
Cla97C01G018820	Cucurbita moschata (Rifu)	cmowmbB849
Cla97C01G018820	Wild cucumber (PI 183967)	cpiwmbB096
Cla97C01G018820	Cucumber (Chinese Long) v3	cucwmbB098
Cla97C01G018820	Cucumber (Chinese Long) v3	cucwmbB268
Cla97C01G018820	Cucumber (Chinese Long) v2	cuwmbB093
Cla97C01G018820	Bottle gourd (USVL1VR-Ls)	lsiwmbB393
Cla97C01G018820	Bottle gourd (USVL1VR-Ls)	lsiwmbB389
Cla97C01G018820	Bottle gourd (USVL1VR-Ls)	lsiwmbB425
Cla97C01G018820	Melon (DHL92) v3.6.1	medwmbB262
Cla97C01G018820	Melon (DHL92) v3.5.1	mewmbB277
Cla97C01G018820	Watermelon (Charleston Gray)	wcgwmbB288
Cla97C01G018820	Watermelon (Charleston Gray)	wcgwmbB317
Cla97C01G018820	Watermelon (97103) v1	wmwmbB081
Cla97C01G018820	Watermelon (97103) v1	wmwmbB146
Cla97C01G018820	Wax gourd	wgowmbB171