MELO3C007453 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007453
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein of unknown function (DUF3511)
Location	chr8 : 2886921 .. 2887435 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATATTTATAGGAGAGAAGACATACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCGATGGAACAGTCAAAAAGGAAGATGTGGTCAATCAAGAGCTCAAGAGAAGGCAAAGGGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATAATGTTTGAGTTGAAACTTTTCCTTTTGTAAAACTATTTTTGTTTCTGTAAAATTTGTTCATCTCCTCATACTCAATGAAGATGAGTGTTTCAAGCTGATAGAGACAACAAGGTTATGCAAACATCTAAATTATATGTAATAACTTCTAAATTTGTCATAAGCTCATGAGTTTTAAGGAATAATATAACATCATCAAATTTTTGAATGATGC

mRNA sequence

ACATATTTATAGGAGAGAAGACATACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCGATGGAACAGTCAAAAAGGAAGATGTGGTCAATCAAGAGCTCAAGAGAAGGCAAAGGGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATAATGTTTGAGTTGAAACTTTTCCTTTTGTAAAACTATTTTTGTTTCTGTAAAATTTGTTCATCTCCTCATACTCAATGAAGATGAGTGTTTCAAGCTGATAGAGACAACAAGGTTATGCAAACATCTAAATTATATGTAATAACTTCTAAATTTGTCATAAGCTCATGAGTTTTAAGGAATAATATAACATCATCAAATTTTTGAATGATGC

Coding sequence (CDS)

ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCGATGGAACAGTCAAAAAGGAAGATGTGGTCAATCAAGAGCTCAAGAGAAGGCAAAGGGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATAATGTTTGA

Protein sequence

MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYNV*

Homology

[Close]

BLAST of MELO3C007453 vs. TrEMBL
Match: A0A0A0KFC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486830 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-39
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYN 86
          EGKLKKSLRNSFKWIKNKISHSFY+
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYD 85

[Close]

BLAST of MELO3C007453 vs. TrEMBL
Match: W9RA26_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006721 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-22
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDG-TVKKED-----VVNQELKRRQRVATY 61
          M+RSKSL G YS  YGD RFGFED  KSYSF+G +V+ ED       N E+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          NMY+MEGKLK SLRNSFKWIK+K   ++Y+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYD 90

[Close]

BLAST of MELO3C007453 vs. TrEMBL
Match: V4S1H2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026866mg PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-19
Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVV----NQELKRRQRVATYNM 61
          ME+SKS SG+ S  + D +FGFED  KSYSF+G   K DV+    N E KRR+RVA YNM
Sbjct: 1  MEKSKSFSGNPSSCF-DAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNM 60

Query: 62 YSMEGKLKKSLRNSFKWIKNKIS 81
          Y+MEGKLK SLRNSFKWIKNK S
Sbjct: 61 YTMEGKLKSSLRNSFKWIKNKFS 82

[Close]

BLAST of MELO3C007453 vs. TrEMBL
Match: M5W4U3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013987mg PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-19
Identity = 52/91 (57.14%), Postives = 63/91 (69.23%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVV-------NQELKRRQRVAT 61
          ME+SKS SG YS  Y + +FGFED  KSYSF+G V    V        N EL+RR+RVA+
Sbjct: 1  MEKSKSFSGYYSTGYTEAQFGFEDRSKSYSFNGPVSCSKVDELSSTSGNPELERRKRVAS 60

Query: 62 YNMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          YNMY++EGK K SLRNSFKWIK K   +FY+
Sbjct: 61 YNMYAVEGKFKSSLRNSFKWIKGKFVDNFYD 91

[Close]

BLAST of MELO3C007453 vs. TrEMBL
Match: A0A067EPT0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034773mg PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.7e-19
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVV----NQELKRRQRVATYNM 61
          ME+SKS SG+ S  + D +FGFED  KSYSF+G   K DV+    N E KRR+RVA YNM
Sbjct: 1  MEKSKSFSGNPSSCF-DAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNM 60

Query: 62 YSMEGKLKKSLRNSFKWIKNKIS 81
          Y+MEGKLK SLRNSFKWIKNK +
Sbjct: 61 YTMEGKLKSSLRNSFKWIKNKFT 82

[Close]

BLAST of MELO3C007453 vs. TAIR10
Match: AT4G09890.1 (AT4G09890.1 Protein of unknown function (DUF3511))

HSP 1 Score: 71.2 bits (173), Expect = 3.4e-13
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDN-PKSYSFDGTVKKEDVVNQELKRRQRVATYNMYS 60
          MM+ SKS +  YS ++    FG++ N   SY+F+G     D    E+KR++RVA+YN+++
Sbjct: 1  MMKGSKSYT-EYSSSFSTDEFGYDQNRSNSYNFNGPCINTD---PEMKRKKRVASYNLFA 60

Query: 61 MEGKLKKSLRNSFKWIKNKIS 81
           E KLK +L+NSFKWIKNK S
Sbjct: 61 TEEKLKSTLKNSFKWIKNKFS 77

[Close]

BLAST of MELO3C007453 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511))

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-09
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1


Query: 11  SYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSMEGKLKKSLRN 70
           SYS +YG       D  K  S   + K   + + EL+R++RVA+Y MY +EGK+K S RN
Sbjct: 30  SYSASYGTRENNIYDVKKEKSIARS-KSWGITDPELQRKKRVASYKMYGVEGKVKGSFRN 89

Query: 71  SFKWIKNKISHSFY 85
           SF+W+K + +   Y
Sbjct: 90  SFRWLKQRYTQVVY 102

[Close]

BLAST of MELO3C007453 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511))

HSP 1 Score: 54.3 bits (129), Expect = 4.4e-08
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 1


Query: 11  SYSKAYGD--VRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSMEGKLKKSL 70
           SYS +Y D   R   + NPK      +      V+ +L+R++RV +Y  Y++EGKLK S 
Sbjct: 42  SYSTSYTDYPTRIPEDQNPKK-GRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSF 101

Query: 71  RNSFKWIKNK 79
           R SFKWIK+K
Sbjct: 102 RKSFKWIKDK 110

[Close]

BLAST of MELO3C007453 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511))

HSP 1 Score: 53.5 bits (127), Expect = 7.4e-08
Identity = 28/84 (33.33%), Postives = 46/84 (54.76%), Query Frame = 1


Query: 6   KSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKED---VVNQELKRRQRVATYNMYSMEG 65
           +S S S   AY +     +D+         VKK+    +   E++R++RVA+YN+Y +EG
Sbjct: 43  RSYSTSTYNAYQNPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEG 102

Query: 66  KLKKSLRNSFKWIKNKISHSFYNV 87
           ++K S++ SFKW K   S++ Y +
Sbjct: 103 RVKGSMKKSFKWFKETCSNAVYGL 126

[Close]

BLAST of MELO3C007453 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511))

HSP 1 Score: 51.2 bits (121), Expect = 3.7e-07
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 1


Query: 45  ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK---ISHSF 84
           E+KR++R+A Y  Y++EGK+K +L+N F+WIKNK   I H F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of MELO3C007453 vs. NCBI nr
Match: gi|659079132|ref|XP_008440092.1| (PREDICTED: uncharacterized protein LOC103484674 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYNV 87
          EGKLKKSLRNSFKWIKNKISHSFYNV
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYNV 86

[Close]

BLAST of MELO3C007453 vs. NCBI nr
Match: gi|700193206|gb|KGN48410.1| (hypothetical protein Csa_6G486830 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-39
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYN 86
          EGKLKKSLRNSFKWIKNKISHSFY+
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYD 85

[Close]

BLAST of MELO3C007453 vs. NCBI nr
Match: gi|703098770|ref|XP_010096474.1| (hypothetical protein L484_006721 [Morus notabilis])

HSP 1 Score: 111.7 bits (278), Expect = 6.5e-22
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDG-TVKKED-----VVNQELKRRQRVATY 61
          M+RSKSL G YS  YGD RFGFED  KSYSF+G +V+ ED       N E+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          NMY+MEGKLK SLRNSFKWIK+K   ++Y+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYD 90

[Close]

BLAST of MELO3C007453 vs. NCBI nr
Match: gi|567870603|ref|XP_006427923.1| (hypothetical protein CICLE_v10026866mg [Citrus clementina])

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-19
Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVV----NQELKRRQRVATYNM 61
          ME+SKS SG+ S  + D +FGFED  KSYSF+G   K DV+    N E KRR+RVA YNM
Sbjct: 1  MEKSKSFSGNPSSCF-DAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNM 60

Query: 62 YSMEGKLKKSLRNSFKWIKNKIS 81
          Y+MEGKLK SLRNSFKWIKNK S
Sbjct: 61 YTMEGKLKSSLRNSFKWIKNKFS 82

[Close]

BLAST of MELO3C007453 vs. NCBI nr
Match: gi|595837771|ref|XP_007207520.1| (hypothetical protein PRUPE_ppa013987mg [Prunus persica])

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-19
Identity = 52/91 (57.14%), Postives = 63/91 (69.23%), Query Frame = 1


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVV-------NQELKRRQRVAT 61
          ME+SKS SG YS  Y + +FGFED  KSYSF+G V    V        N EL+RR+RVA+
Sbjct: 1  MEKSKSFSGYYSTGYTEAQFGFEDRSKSYSFNGPVSCSKVDELSSTSGNPELERRKRVAS 60

Query: 62 YNMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          YNMY++EGK K SLRNSFKWIK K   +FY+
Sbjct: 61 YNMYAVEGKFKSSLRNSFKWIKGKFVDNFYD 91

The following BLAST results are available for this feature:

BLAST of MELO3C007453 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFC2_CUCSA	1.8e-39	95.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486830 PE=4 SV=1	[more]
W9RA26_9ROSA	4.5e-22	63.33	Uncharacterized protein OS=Morus notabilis GN=L484_006721 PE=4 SV=1	[more]
V4S1H2_9ROSI	2.1e-19	65.06	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026866mg PE=4 SV=1	[more]
M5W4U3_PRUPE	3.6e-19	57.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013987mg PE=4 SV=1	[more]
A0A067EPT0_CITSI	4.7e-19	63.86	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034773mg PE=4 SV=1	[more]

BLAST of MELO3C007453 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09890.1	3.4e-13	46.91	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	2.3e-09	40.54	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	4.4e-08	42.86	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	7.4e-08	33.33	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	3.7e-07	52.38	Protein of unknown function (DUF3511)	[more]

BLAST of MELO3C007453 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079132\|ref\|XP_008440092.1\|	1.7e-41	100.00	PREDICTED: uncharacterized protein LOC103484674 [Cucumis melo]	[more]
gi\|700193206\|gb\|KGN48410.1\|	2.6e-39	95.29	hypothetical protein Csa_6G486830 [Cucumis sativus]	[more]
gi\|703098770\|ref\|XP_010096474.1\|	6.5e-22	63.33	hypothetical protein L484_006721 [Morus notabilis]	[more]
gi\|567870603\|ref\|XP_006427923.1\|	3.0e-19	65.06	hypothetical protein CICLE_v10026866mg [Citrus clementina]	[more]
gi\|595837771\|ref\|XP_007207520.1\|	5.2e-19	57.14	hypothetical protein PRUPE_ppa013987mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021899	DUF3511

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007453T1	MELO3C007453T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 43..84 score: 3.0
None	No IPR available	PANTHER	PTHR33193	FAMILY NOT NAMED	coord: 2..80 score: 3.7
None	No IPR available	PANTHER	PTHR33193:SF7	SUBFAMILY NOT NAMED	coord: 2..80 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007453	Csa6G486830	Cucumber (Chinese Long) v2	cumeB503
MELO3C007453	Cla008475	Watermelon (97103) v1	mewmB573
MELO3C007453	ClCG01G015870	Watermelon (Charleston Gray)	mewcgB514
MELO3C007453	Cla97C01G014850	Watermelon (97103) v2	mewmbB513
MELO3C007453	CSPI06G27010	Wild cucumber (PI 183967)	cpimeB508
MELO3C007453	Cucsa.101400	Cucumber (Gy14) v1	cgymeB131
MELO3C007453	CmaCh07G007730	Cucurbita maxima (Rimu)	cmameB809
MELO3C007453	CsGy6G026370	Cucumber (Gy14) v2	cgybmeB444
MELO3C007453	CsaV3_6G042150	Cucumber (Chinese Long) v3	cucmeB517

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007453	Cucurbita pepo (Zucchini)	cpemeB060
MELO3C007453	Cucurbita pepo (Zucchini)	cpemeB449
MELO3C007453	Bottle gourd (USVL1VR-Ls)	lsimeB156
MELO3C007453	Silver-seed gourd	carmeB0807
MELO3C007453	Cucumber (Chinese Long) v3	cucmeB161
MELO3C007453	Wax gourd	mewgoB632
MELO3C007453	Wax gourd	mewgoB643
MELO3C007453	Cucurbita moschata (Rifu)	cmomeB793
MELO3C007453	Melon (DHL92) v3.5.1	memeB058
MELO3C007453	Cucumber (Gy14) v1	cgymeB425
MELO3C007453	Cucurbita maxima (Rimu)	cmameB617
MELO3C007453	Cucurbita moschata (Rifu)	cmomeB605
MELO3C007453	Wild cucumber (PI 183967)	cpimeB159
MELO3C007453	Cucumber (Chinese Long) v2	cumeB159