CSPI06G27010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAGCTAACAATATCTACTAACAAAGAAACTTTGATATGATTTATACCCACACAAAGATTTCTGGTATCACGTATTTATAGGAGAGATGACAAACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGAGCTGAGACTTTTCCTTTTGTAAAACTATTTTTGTTTCTCTGTAAAATTTGTCCATCTCCTCATACTCAATGAAGAGGAGTGTTTCAAGCTGATAGAGACAACAAGGTTATGCAAACTTCTAAACTATATGTAATAACTTCAATTCGATGGCTATCTCTACATTAATCCCCAATCATAATTCATTATACAACTGAACAGTCACTAGAGCTAGCAGGGTTTTAATTTAGTAAAACATAATGTTATTTACCTAGCATGGGTGCAACAATCTTGTCATAAGCTCATGAGTTTCAAGGAATAATATAACATCATCAAATTTTGAATGATGCTTTGCTTCATAGACCAGAAAAATAGATGGCTTTCACATTCTTC ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA
BLAST of CSPI06G27010 vs. TrEMBL
Match: A0A0A0KFC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486830 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 7.5e-41 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of CSPI06G27010 vs. TrEMBL
Match: W9RA26_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006721 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-22 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1
BLAST of CSPI06G27010 vs. TrEMBL
Match: M5W4U3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013987mg PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 9.5e-20 Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of CSPI06G27010 vs. TrEMBL
Match: B9HG58_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06990g PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-19 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 1
BLAST of CSPI06G27010 vs. TrEMBL
Match: V4S1H2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026866mg PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 8.0e-19 Identity = 55/83 (66.27%), Postives = 61/83 (73.49%), Query Frame = 1
BLAST of CSPI06G27010 vs. TAIR10
Match: AT4G09890.1 (AT4G09890.1 Protein of unknown function (DUF3511)) HSP 1 Score: 69.7 bits (169), Expect = 1.0e-12 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 1
BLAST of CSPI06G27010 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511)) HSP 1 Score: 55.1 bits (131), Expect = 2.6e-08 Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 1
BLAST of CSPI06G27010 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511)) HSP 1 Score: 50.4 bits (119), Expect = 6.3e-07 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1
BLAST of CSPI06G27010 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 50.1 bits (118), Expect = 8.2e-07 Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 1
BLAST of CSPI06G27010 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511)) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1
BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|700193206|gb|KGN48410.1| (hypothetical protein Csa_6G486830 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1
BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|659079132|ref|XP_008440092.1| (PREDICTED: uncharacterized protein LOC103484674 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 2.9e-38 Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 1
BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|703098770|ref|XP_010096474.1| (hypothetical protein L484_006721 [Morus notabilis]) HSP 1 Score: 113.6 bits (283), Expect = 1.7e-22 Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1
BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|595837771|ref|XP_007207520.1| (hypothetical protein PRUPE_ppa013987mg [Prunus persica]) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19 Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|224096448|ref|XP_002310621.1| (hypothetical protein POPTR_0007s06990g [Populus trichocarpa]) HSP 1 Score: 103.2 bits (256), Expect = 2.3e-19 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |