CSPI06G27010 (gene) Wild cucumber (PI 183967)

NameCSPI06G27010
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionProtein of unknown function (DUF3511)
LocationChr6 : 23786201 .. 23786953 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAGCTAACAATATCTACTAACAAAGAAACTTTGATATGATTTATACCCACACAAAGATTTCTGGTATCACGTATTTATAGGAGAGATGACAAACTTATGAACCATATCCAAAGTTTCTAATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGAGCTGAGACTTTTCCTTTTGTAAAACTATTTTTGTTTCTCTGTAAAATTTGTCCATCTCCTCATACTCAATGAAGAGGAGTGTTTCAAGCTGATAGAGACAACAAGGTTATGCAAACTTCTAAACTATATGTAATAACTTCAATTCGATGGCTATCTCTACATTAATCCCCAATCATAATTCATTATACAACTGAACAGTCACTAGAGCTAGCAGGGTTTTAATTTAGTAAAACATAATGTTATTTACCTAGCATGGGTGCAACAATCTTGTCATAAGCTCATGAGTTTCAAGGAATAATATAACATCATCAAATTTTGAATGATGCTTTGCTTCATAGACCAGAAAAATAGATGGCTTTCACATTCTTC

mRNA sequence

ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA

Coding sequence (CDS)

ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCAATGGAACAATCAAAAAGGAAGATGTGGCCAATCAAGAGCTCAAGAGAAGGCAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATGATGATTGA
BLAST of CSPI06G27010 vs. TrEMBL
Match: A0A0A0KFC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486830 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 7.5e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYDD 87
          EGKLKKSLRNSFKWIKNKISHSFYDD
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYDD 86

BLAST of CSPI06G27010 vs. TrEMBL
Match: W9RA26_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006721 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-22
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNG-TIKKED-----VANQELKRRQRVATY 61
          M+RSKSL G YS  YGD RFGFED  KSYSFNG +++ ED      +N E+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYDD 87
          NMY+MEGKLK SLRNSFKWIK+K   ++YD+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDE 91

BLAST of CSPI06G27010 vs. TrEMBL
Match: M5W4U3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013987mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.5e-20
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDV-------ANQELKRRQRVAT 61
          ME+SKS SG YS  Y + +FGFED  KSYSFNG +    V        N EL+RR+RVA+
Sbjct: 1  MEKSKSFSGYYSTGYTEAQFGFEDRSKSYSFNGPVSCSKVDELSSTSGNPELERRKRVAS 60

Query: 62 YNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD 87
          YNMY++EGK K SLRNSFKWIK K   +FYD+
Sbjct: 61 YNMYAVEGKFKSSLRNSFKWIKGKFVDNFYDE 92

BLAST of CSPI06G27010 vs. TrEMBL
Match: B9HG58_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06990g PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-19
Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKK------EDVANQELKRRQRVATY 61
          ME+SKS SG YS AY ++R GFE+   SYSFNG   K      E   N ELKRR+RVA Y
Sbjct: 1  MEKSKSFSG-YSNAYSEIRLGFEERSGSYSFNGPAGKVDDVELESSGNPELKRRKRVAQY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYDD 87
          NMY+MEGK+K SLRNSFKWIK+K+   ++DD
Sbjct: 61 NMYTMEGKIKSSLRNSFKWIKSKLVDDYFDD 90

BLAST of CSPI06G27010 vs. TrEMBL
Match: V4S1H2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026866mg PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-19
Identity = 55/83 (66.27%), Postives = 61/83 (73.49%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDV----ANQELKRRQRVATYNM 61
          ME+SKS SG+ S  + D +FGFED  KSYSFNG   K DV     N E KRR+RVA YNM
Sbjct: 1  MEKSKSFSGNPSSCF-DAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNM 60

Query: 62 YSMEGKLKKSLRNSFKWIKNKIS 81
          Y+MEGKLK SLRNSFKWIKNK S
Sbjct: 61 YTMEGKLKSSLRNSFKWIKNKFS 82

BLAST of CSPI06G27010 vs. TAIR10
Match: AT4G09890.1 (AT4G09890.1 Protein of unknown function (DUF3511))

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-12
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 1

Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDN-PKSYSFNGTIKKEDVANQELKRRQRVATYNMYS 60
          MM+ SKS +  YS ++    FG++ N   SY+FNG     D    E+KR++RVA+YN+++
Sbjct: 1  MMKGSKSYT-EYSSSFSTDEFGYDQNRSNSYNFNGPCINTD---PEMKRKKRVASYNLFA 60

Query: 61 MEGKLKKSLRNSFKWIKNKIS 81
           E KLK +L+NSFKWIKNK S
Sbjct: 61 TEEKLKSTLKNSFKWIKNKFS 77

BLAST of CSPI06G27010 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511))

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-08
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 1

Query: 11  SYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSLRN 70
           SYS +YG       D  K  S   + K   + + EL+R++RVA+Y MY +EGK+K S RN
Sbjct: 30  SYSASYGTRENNIYDVKKEKSIARS-KSWGITDPELQRKKRVASYKMYGVEGKVKGSFRN 89

Query: 71  SFKWIKNKISHSFY 85
           SF+W+K + +   Y
Sbjct: 90  SFRWLKQRYTQVVY 102

BLAST of CSPI06G27010 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511))

HSP 1 Score: 50.4 bits (119), Expect = 6.3e-07
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1

Query: 6   KSLSGSYSKAYGDVRFGFED-NPKSYSFNGTIKK--EDVANQELKRRQRVATYNMYSMEG 65
           +S S S   AY +     +D N KS   N   KK  + +   E++R++RVA+YN+Y +EG
Sbjct: 43  RSYSTSTYNAYQNPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEG 102

Query: 66  KLKKSLRNSFKWIKNKISHSFY 85
           ++K S++ SFKW K   S++ Y
Sbjct: 103 RVKGSMKKSFKWFKETCSNAVY 124

BLAST of CSPI06G27010 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511))

HSP 1 Score: 50.1 bits (118), Expect = 8.2e-07
Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 1

Query: 41  VANQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK---ISHSF 84
           +++ E+KR++R+A Y  Y++EGK+K +L+N F+WIKNK   I H F
Sbjct: 65  LSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of CSPI06G27010 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511))

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1

Query: 11  SYSKAYGD--VRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSMEGKLKKSL 70
           SYS +Y D   R   + NPK    + +       + +L+R++RV +Y  Y++EGKLK S 
Sbjct: 42  SYSTSYTDYPTRIPEDQNPKK-GRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSF 101

Query: 71  RNSFKWIKNK 79
           R SFKWIK+K
Sbjct: 102 RKSFKWIKDK 110

BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|700193206|gb|KGN48410.1| (hypothetical protein Csa_6G486830 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYDD 87
          EGKLKKSLRNSFKWIKNKISHSFYDD
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYDD 86

BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|659079132|ref|XP_008440092.1| (PREDICTED: uncharacterized protein LOC103484674 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 2.9e-38
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 1

Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYD 86
          EGKLKKSLRNSFKWIKNKISHSFY+
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYN 85

BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|703098770|ref|XP_010096474.1| (hypothetical protein L484_006721 [Morus notabilis])

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-22
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNG-TIKKED-----VANQELKRRQRVATY 61
          M+RSKSL G YS  YGD RFGFED  KSYSFNG +++ ED      +N E+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYDD 87
          NMY+MEGKLK SLRNSFKWIK+K   ++YD+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYDE 91

BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|595837771|ref|XP_007207520.1| (hypothetical protein PRUPE_ppa013987mg [Prunus persica])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDV-------ANQELKRRQRVAT 61
          ME+SKS SG YS  Y + +FGFED  KSYSFNG +    V        N EL+RR+RVA+
Sbjct: 1  MEKSKSFSGYYSTGYTEAQFGFEDRSKSYSFNGPVSCSKVDELSSTSGNPELERRKRVAS 60

Query: 62 YNMYSMEGKLKKSLRNSFKWIKNKISHSFYDD 87
          YNMY++EGK K SLRNSFKWIK K   +FYD+
Sbjct: 61 YNMYAVEGKFKSSLRNSFKWIKGKFVDNFYDE 92

BLAST of CSPI06G27010 vs. NCBI nr
Match: gi|224096448|ref|XP_002310621.1| (hypothetical protein POPTR_0007s06990g [Populus trichocarpa])

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-19
Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 1

Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKK------EDVANQELKRRQRVATY 61
          ME+SKS SG YS AY ++R GFE+   SYSFNG   K      E   N ELKRR+RVA Y
Sbjct: 1  MEKSKSFSG-YSNAYSEIRLGFEERSGSYSFNGPAGKVDDVELESSGNPELKRRKRVAQY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYDD 87
          NMY+MEGK+K SLRNSFKWIK+K+   ++DD
Sbjct: 61 NMYTMEGKIKSSLRNSFKWIKSKLVDDYFDD 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KFC2_CUCSA7.5e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486830 PE=4 SV=1[more]
W9RA26_9ROSA1.2e-2263.74Uncharacterized protein OS=Morus notabilis GN=L484_006721 PE=4 SV=1[more]
M5W4U3_PRUPE9.5e-2057.61Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013987mg PE=4 SV=1[more]
B9HG58_POPTR1.6e-1959.34Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s06990g PE=4 SV=1[more]
V4S1H2_9ROSI8.0e-1966.27Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026866mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G09890.11.0e-1248.15 Protein of unknown function (DUF3511)[more]
AT5G11970.12.6e-0840.54 Protein of unknown function (DUF3511)[more]
AT1G72720.16.3e-0737.80 Protein of unknown function (DUF3511)[more]
AT2G47480.18.2e-0747.83 Protein of unknown function (DUF3511)[more]
AT2G19460.11.1e-0641.43 Protein of unknown function (DUF3511)[more]
Match NameE-valueIdentityDescription
gi|700193206|gb|KGN48410.1|1.1e-40100.00hypothetical protein Csa_6G486830 [Cucumis sativus][more]
gi|659079132|ref|XP_008440092.1|2.9e-3895.29PREDICTED: uncharacterized protein LOC103484674 [Cucumis melo][more]
gi|703098770|ref|XP_010096474.1|1.7e-2263.74hypothetical protein L484_006721 [Morus notabilis][more]
gi|595837771|ref|XP_007207520.1|1.4e-1957.61hypothetical protein PRUPE_ppa013987mg [Prunus persica][more]
gi|224096448|ref|XP_002310621.1|2.3e-1959.34hypothetical protein POPTR_0007s06990g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021899DUF3511
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G27010.1CSPI06G27010.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 43..83
score: 2.0
NoneNo IPR availablePANTHERPTHR33193FAMILY NOT NAMEDcoord: 2..80
score: 1.9
NoneNo IPR availablePANTHERPTHR33193:SF7SUBFAMILY NOT NAMEDcoord: 2..80
score: 1.9

The following gene(s) are paralogous to this gene:

None