MELO3C007318.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007318.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane protein, putative
Locationchr08 : 2148607 .. 2149246 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTATTCAATTCCATTCATTTCAATAATTTTGCTTTATTCTGTCCCCTTTCTCTTTTCCTCTCTATATAAATCCTAATGCCTTCCCACTCCACTTTCAACCAACTCTCATTCAAAACCCTTCACTTCCTCACAATATCTAACGTTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAGACTACAAGGCGGCCAGCGGTGGCTCTCACACTGAACCGCCCGGCCCGACCCGGCTCACCCTTTTTTCCTTTTCTTTTTCCCCTTTTCATGAGTTTGATGATGGAAGAGAAGAAACGGCATGGAGAGATTGGAGAGTCTCGGAGCTGTTTTGGTCTCTTTTTGTAAAAACAATTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTCAATTAATGGGAAAAAAATGGAGATTTCCTTCTCTATTTATGATTTTGTGCTCTTAGTTGTTTAATTCTTCTTTCTTAAGTATAATAAATTATACAAATTAAACA

mRNA sequence

CCATTATTCAATTCCATTCATTTCAATAATTTTGCTTTATTCTGTCCCCTTTCTCTTTTCCTCTCTATATAAATCCTAATGCCTTCCCACTCCACTTTCAACCAACTCTCATTCAAAACCCTTCACTTCCTCACAATATCTAACGTTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAGACTACAAGGCGGCCAGCGGTGGCTCTCACACTGAACCGCCCGGCCCGACCCGGCTCACCCTTTTTTCCTTTTCTTTTTCCCCTTTTCATGAGTTTGATGATGGAAGAGAAGAAACGGCATGGAGAGATTGGAGAGTCTCGGAGCTGTTTTGGTCTCTTTTTGTAAAAACAATTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTTTCAATTAATGGGAAAAAAATGGAGATTTCCTTCTCTATTTATGATTTTGTGCTCTTAGTTGTTTAATTCTTCTTTCTTAAGTATAATAAATTATACAAATTAAACA

Coding sequence (CDS)

ATGCCTTCCCACTCCACTTTCAACCAACTCTCATTCAAAACCCTTCACTTCCTCACAATATCTAACGTTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAG

Protein sequence

MPSHSTFNQLSFKTLHFLTISNVLNPPLLMAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT
Homology
[Close]
BLAST of MELO3C007318.2 vs. NCBI nr
Match: KGN49191.1 (hypothetical protein Csa_6G516990 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 3.3e-16
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 82
          MA  R+ YIT AAYSPRASARP PKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

[Close]
BLAST of MELO3C007318.2 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-14
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0 

Query: 30  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTR 80
           M G RSD I+GA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

[Close]
BLAST of MELO3C007318.2 vs. NCBI nr
Match: KJB53424.1 (hypothetical protein B456_009G172100 [Gossypium raimondii])

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-08
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRR 81
          MAG R + I G  YSPR + RPIP+RGQVK+ I++G+AH+ ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

[Close]
BLAST of MELO3C007318.2 vs. NCBI nr
Match: OMO76568.1 (hypothetical protein CCACVL1_15597 [Corchorus capsularis])

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRR 81
          MAG R + I G   S R  ARPIP+RGQVK+ I+VG+AH+VASIFS T+RR
Sbjct: 1  MAGARRELINGGNLSSRIVARPIPRRGQVKVAILVGIAHSVASIFSLTSRR 51

[Close]
BLAST of MELO3C007318.2 vs. NCBI nr
Match: KCW74651.1 (hypothetical protein EUGRSUZ_E03373 [Eucalyptus grandis])

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-07
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTR 80
          MA  RS  ++G   S R S+RPIPKRGQVK+GI+VGLAH+VASIFS + R
Sbjct: 17 MAISRSGEMSGGGVSGRISSRPIPKRGQVKVGIVVGLAHSVASIFSQSLR 66

[Close]
BLAST of MELO3C007318.2 vs. TrEMBL
Match: tr|A0A0A0KN78|A0A0A0KN78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.2e-16
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 82
          MA  R+ YIT AAYSPRASARP PKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

[Close]
BLAST of MELO3C007318.2 vs. TrEMBL
Match: tr|A0A0D2T9Z2|A0A0D2T9Z2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G172100 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRR 81
          MAG R + I G  YSPR + RPIP+RGQVK+ I++G+AH+ ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

[Close]
BLAST of MELO3C007318.2 vs. TrEMBL
Match: tr|F6GYY1|F6GYY1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-08
Identity = 34/52 (65.38%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 82
          MAG R D I G ++S R S RPIPKRGQVK+ I VG AH+VASIFS   RRT
Sbjct: 1  MAGGRGDMINGGSFSQRFSGRPIPKRGQVKVAIAVGFAHSVASIFSLGGRRT 52

[Close]
BLAST of MELO3C007318.2 vs. TrEMBL
Match: tr|F6GYY0|F6GYY0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.9e-08
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 82
          MAG R   I G  +S R S RPIPKRGQVK+GI+VGLAH+VASIFS   RR+
Sbjct: 1  MAGGRRAMINGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIFSLGGRRS 52

[Close]
BLAST of MELO3C007318.2 vs. TrEMBL
Match: tr|A0A1R3I1W3|A0A1R3I1W3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_15597 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.4e-08
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRR 81
          MAG R + I G   S R  ARPIP+RGQVK+ I+VG+AH+VASIFS T+RR
Sbjct: 1  MAGARRELINGGNLSSRIVARPIPRRGQVKVAILVGIAHSVASIFSLTSRR 51

The following BLAST results are available for this feature:
BLAST of MELO3C007318.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49191.13.3e-1688.46hypothetical protein Csa_6G516990 [Cucumis sativus][more]
XP_022977341.13.1e-1484.00uncharacterized protein LOC111477692 [Cucurbita maxima][more]
KJB53424.12.0e-0858.82hypothetical protein B456_009G172100 [Gossypium raimondii][more]
OMO76568.11.3e-0762.75hypothetical protein CCACVL1_15597 [Corchorus capsularis][more]
KCW74651.14.8e-0764.00hypothetical protein EUGRSUZ_E03373 [Eucalyptus grandis][more]
BLAST of MELO3C007318.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C007318.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007318.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KN78|A0A0A0KN78_CUCSA2.2e-1688.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1[more]
tr|A0A0D2T9Z2|A0A0D2T9Z2_GOSRA1.3e-0858.82Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G172100 PE=4 ... [more]
tr|F6GYY1|F6GYY1_VITVI1.7e-0865.38Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=... [more]
tr|F6GYY0|F6GYY0_VITVI4.9e-0865.38Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=... [more]
tr|A0A1R3I1W3|A0A1R3I1W3_COCAP8.4e-0862.75Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_15597 PE=4 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007318.2.1MELO3C007318.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36615FAMILY NOT NAMEDcoord: 30..81

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007318.2Csa6G516990Cucumber (Chinese Long) v2cumedB486
MELO3C007318.2CSPI06G34270Wild cucumber (PI 183967)cpimedB496
MELO3C007318.2Cp4.1LG19g07510Cucurbita pepo (Zucchini)cpemedB540
MELO3C007318.2Cla001352Watermelon (97103) v1medwmB561
MELO3C007318.2Cla97C01G022450Watermelon (97103) v2medwmbB507
MELO3C007318.2CsaV3_6G049780Cucumber (Chinese Long) v3cucmedB508
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007318.2Silver-seed gourdcarmedB0035
MELO3C007318.2Silver-seed gourdcarmedB0156
MELO3C007318.2Silver-seed gourdcarmedB0652
MELO3C007318.2Silver-seed gourdcarmedB0875
MELO3C007318.2Silver-seed gourdcarmedB0924
MELO3C007318.2Silver-seed gourdcarmedB0925
MELO3C007318.2Silver-seed gourdcarmedB0937
MELO3C007318.2Cucumber (Chinese Long) v3cucmedB085
MELO3C007318.2Watermelon (97103) v2medwmbB524
MELO3C007318.2Wax gourdmedwgoB641
MELO3C007318.2Wax gourdmedwgoB674
MELO3C007318.2Cucumber (Gy14) v2cgybmedB072
MELO3C007318.2Cucumber (Gy14) v2cgybmedB442
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007318.2Cucumber (Gy14) v1cgymedB025
MELO3C007318.2Cucumber (Gy14) v1cgymedB199
MELO3C007318.2Cucumber (Gy14) v1cgymedB247
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB158
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB441
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB564
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB667
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB694
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB707
MELO3C007318.2Cucurbita maxima (Rimu)cmamedB897
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB147
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB428
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB552
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB657
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB700
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB686
MELO3C007318.2Cucurbita moschata (Rifu)cmomedB886
MELO3C007318.2Cucurbita pepo (Zucchini)cpemedB086
MELO3C007318.2Cucurbita pepo (Zucchini)cpemedB091
MELO3C007318.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007318.2Cucurbita pepo (Zucchini)cpemedB773
MELO3C007318.2Cucurbita pepo (Zucchini)cpemedB841
MELO3C007318.2Wild cucumber (PI 183967)cpimedB076
MELO3C007318.2Wild cucumber (PI 183967)cpimedB560
MELO3C007318.2Cucumber (Chinese Long) v2cumedB077
MELO3C007318.2Cucumber (Chinese Long) v2cumedB541
MELO3C007318.2Melon (DHL92) v3.6.1medmedB074
MELO3C007318.2Melon (DHL92) v3.6.1medmedB099
MELO3C007318.2Bottle gourd (USVL1VR-Ls)lsimedB126
MELO3C007318.2Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C007318.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007318.2Watermelon (Charleston Gray)medwcgB510
MELO3C007318.2Watermelon (Charleston Gray)medwcgB514
MELO3C007318.2Watermelon (Charleston Gray)medwcgB519
MELO3C007318.2Watermelon (97103) v1medwmB550
MELO3C007318.2Watermelon (97103) v1medwmB582