MELO3C007288 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C007288
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSmr domain-containing protein YPL199C, putative isoform 4
Locationchr8 : 1977605 .. 1981911 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGAAAGGAAACGTATGGACTGAATGCATCAAAATGTAGTGAGGAGGATATCGTGCTAAACTCTTTGGTTGATGCTTTTGGTTCTGAATTTTCACTTGAGGAAATAGCTTCAGCCTATTTTAAGGCAGGCTACAAGGCAGACTTGGCAGGTGAAATTTTGTTTCAAATGCGGGAGAGCACCTCAAACTCTGCATTGAATGATGACGTTGGAAATGGAGATAATTTGGGTAAGGGCAAAGTGTCTGAGAAGAAATATCAGGTCAAAGGGAACCTGAAAACTGCAAAGTTAAAGGTTCAGCCTTTTTCAACAGGCACAGTTTCCAACATTATCGGTAAAGAATATGCTTGTTCCAAGCCATCAGGAAATAATTTTACTAAGGTAAATAAACCAGTAAAGGTGGAGATGAAGGTTTTGCATGAATCTTCAAGTGAAGGAGATTGTACAAGTTTACCCAGTGACTTTGACCTGCATCATGAGATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGTTTCAGGTTGAAAAGGGAAGTGATCCGAGAAGTTATTGGTAGGCTGTTATCTTTATCTTTGCCAGTTATCTTCAATCTTATTCTTACCTCAGATAACACATTGGAAAATAACTAGATATCTTATGCTTGTCTTGAAGAGATTTCCCTATTCTGATTGCTGGAGTTTATTCTGTTGATAAGCATAGTTTGGATCTAGTAGACTAAAATTTTTATTGTCTTGCAAAATAGGTTTAACCTTATTCACATTATGAAACCAAAGACCTTGAAAATTTATGTGTGCATGAACACTGTTAGAATCAATGGCTGTCTTTAAAATCATGTTAGAAGTCAGTGGGTCAGAACTCTTCAATGATTATCATAGTTATATCAAATGTTCATCCAAGTGTAAGATTATCGTTTGGCTGTTTGAAATATAAGCCATCTTGAGATTTAATCAAATATTTCAGAACTCTTTACTTCGGTAGTTTTAAAGAACCCTTTTATTTTATTGTTTTATCTCAACTTTAAGCATTGTGAAGACAAAGGAACTTTGTTAGTTAACACTTTAAATATAAAAGGAATGAACCAACGGCAGCCTTGGAATTTCTGTTCTAGTAGTCGTCATTTTAGTGCTTTAACTAGTTTCTGTCTTCTGAGGAACATAAGCTTCAATTCAACATTATCGGTCACAATTACTGTTAAATAATATAAGTAATAACTCCACTGACTATCAACCTACCGAAAACTTTCTATCATATTAATACACAAATTTCATTGTATTTCTCAATTCTAGGATTAGTGAAGTGATTAAGATGAAATTAGGTTTTTATTTCTTCAAACAAAAATTCCAAAATGAATAATTAATTATGGTTCTCTCATATCATAGTAAAGTAATTGTTTAAATATTATCTAAGTTTCTTATCAACTCATTTTGTCTCCATTTTTTTAGGATTCTGTGCTGTTAGTCTCTGTAACCTTTCTGCTTAATGTCAAGGTTTATTTATATTGCTAATGGTTTGAGATACGTATATAAAAGCTAATTCTGCATTTCATACCATGCTTTCAGTATTTGCCCCAACCAGCCTTGCAAAGGAAAGTTGGTGCAGCCTGAGGCAATTTGATTTGGAAGAGAAAATTGTTTCAGTATATATATGTATAGAGTTTAAAATGAAAAAGTAACATTAATATAAAAATTGCAATCTGTTGCAATAGAATTTTATATTTGTTGTATTGTTTGTTCTTTACTAGTATAAATATGGATACAGGCTTCTTATTGAAATGCATACTATTGATTAAGGATATTACCGATTAATAGGGTTTGCATTTTTACTGCAGGCAGTTGTGGATATGATATGAAAAAGGTATGCAAAATGCCAGTTTTAATAGCTTTTCCAGTCTCTGATGGTTTTCAAGAATTGCAATCCTGAATGGAGTTCATATAATTTCTGATAATTCCTGCTCTCCCTGAATTGGATATGTCATGACATTTATTTCCCACCTCTATTACTTATCTAGTTACAATCCATGTTGCATATGCTCCTCTTGTTATGGGCTTCAACGGTTGTTTTTTCTTCTTTTAAAAAATACTTTTTATAATTCCCTCTCTCTCTCTCACACACACACAAATTTGCTATGTCACGACTTTTTGGAATTTATTGCCCAATTTTATTACTTTTTTTGGTAAAATCTCTAGCTAAGAAATAGACACGCAAAACTTAATACACATGCCTGCTCGTGATGTTAGAGAGTGGATATTTTCTGGATGATACAAGATGATTGAATCATGTGTCCGTTTGGACTTCAATTTTGAAGACCTTTTGTAACTATTCCATCAGTAACATTTTACTTAGTTGGAACCCCTTCTTTTTTTTTTTAGTATGCCCTTTATTCTTTCATTCTTTCATTCTTTCTCAATAGAAGTTGTTGTTTCTCTCTAATGAGATTTTACCATAAAGAC

mRNA sequence

ATGACAGGAAAGGAAACGTATGGACTGAATGCATCAAAATGTAGTGAGGAGGATATCGTGCTAAACTCTTTGGTTGATGCTTTTGGTTCTGAATTTTCACTTGAGGAAATAGCTTCAGCCTATTTTAAGGCAGGCTACAAGGCAGACTTGGCAGGTGAAATTTTGTTTCAAATGCGGGAGAGCACCTCAAACTCTGCATTGAATGATGACGTTGGAAATGGAGATAATTTGGGTAAGGGCAAAGTGTCTGAGAAGAAATATCAGGTCAAAGGGAACCTGAAAACTGCAAAGTTAAAGGTTCAGCCTTTTTCAACAGGCACAGTTTCCAACATTATCGGTAAAGAATATGCTTGTTCCAAGCCATCAGGAAATAATTTTACTAAGGTAAATAAACCAGTAAAGGTGGAGATGAAGGTTTTGCATGAATCTTCAAGTGAAGGAGATTGTACAAGTTTACCCAGTGACTTTGACCTGCATCATGAGATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGTTTCAGGTTGAAAAGGGAAGTGATCCGAGAAGTTATTGGCAGTTGTGGATATGATATGAAAAAGGTATGCAAAATGCCAGTTTTAATAGCTTTTCCAGTCTCTGATGGTTTTCAAGAATTGCAATCCTGAATGGAGTTCATATAATTTCTGATAATTCCTGCTCTCCCTGAATTGGATATGTCATGACATTTATTTCCCACCTCTATTACTTATCTAGTTACAATCCATGTTGCATATGCTCCTCTTGTTATGGGCTTCAACGGTTGTTTTTTCTTCTTTTAAAAAATACTTTTTATAATTCCCTCTCTCTCTCTCACACACACACAAATTTGCTATGTCACGACTTTTTGGAATTTATTGCCCAATTTTATTACTTTTTTTGGTAAAATCTCTAGCTAAGAAATAGACACGCAAAACTTAATACACATGCCTGCTCGTGATGTTAGAGAGTGGATATTTTCTGGATGATACAAGATGATTGAATCATGTGTCCGTTTGGACTTCAATTTTGAAGACCTTTTGTAACTATTCCATCAGTAACATTTTACTTAGTTGGAACCCCTTCTTTTTTTTTTTAGTATGCCCTTTATTCTTTCATTCTTTCATTCTTTCTCAATAGAAGTTGTTGTTTCTCTCTAATGAGATTTTACCATAAAGAC

Coding sequence (CDS)

ATGACAGGAAAGGAAACGTATGGACTGAATGCATCAAAATGTAGTGAGGAGGATATCGTGCTAAACTCTTTGGTTGATGCTTTTGGTTCTGAATTTTCACTTGAGGAAATAGCTTCAGCCTATTTTAAGGCAGGCTACAAGGCAGACTTGGCAGGTGAAATTTTGTTTCAAATGCGGGAGAGCACCTCAAACTCTGCATTGAATGATGACGTTGGAAATGGAGATAATTTGGGTAAGGGCAAAGTGTCTGAGAAGAAATATCAGGTCAAAGGGAACCTGAAAACTGCAAAGTTAAAGGTTCAGCCTTTTTCAACAGGCACAGTTTCCAACATTATCGGTAAAGAATATGCTTGTTCCAAGCCATCAGGAAATAATTTTACTAAGGTAAATAAACCAGTAAAGGTGGAGATGAAGGTTTTGCATGAATCTTCAAGTGAAGGAGATTGTACAAGTTTACCCAGTGACTTTGACCTGCATCATGAGATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGTTTCAGGTTGAAAAGGGAAGTGATCCGAGAAGTTATTGGCAGTTGTGGATATGATATGAAAAAGGTATGCAAAATGCCAGTTTTAATAGCTTTTCCAGTCTCTGATGGTTTTCAAGAATTGCAATCCTGA
Homology
[Close]
BLAST of MELO3C007288 vs. Swiss-Prot
Match: SDE5_ARATH (Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana GN=SDE5 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.8e-26
Identity = 78/209 (37.32%), Postives = 109/209 (52.15%), Query Frame = 1 

Query: 10  NASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSNSALND 69
           ++S    +   L  L+D FGS FSL++IA+AY +A    D+AGEIL  M E T      D
Sbjct: 6   SSSNSDPDSRSLQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAEKTPQC---D 65

Query: 70  DVGNGDNLGKGKV----SEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSKPSGNN 129
            V       K        E   Q     K  + K    S GTVS++IGKEYA ++P  N 
Sbjct: 66  QVEMKTATSKPTQVYVPKEVPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNA 125

Query: 130 FTKVNKPVKVEMKVLHES---------SSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRL 189
             +  KP+K+  + + E+         S+EG  +  P+D      +E+F+ KMLG+GF+ 
Sbjct: 126 PKEATKPLKINSRDIPETEIWSEEMRKSNEGKISRAPTD------VEEFIVKMLGEGFQA 185

Query: 190 KREVIREVIGSCGYDMKKSMENLLNRSTT 206
            +EVI +V+G CGYD+KKS E LL+ S T
Sbjct: 186 SQEVIHQVLGVCGYDVKKSTEKLLDFSDT 205

[Close]
BLAST of MELO3C007288 vs. TrEMBL
Match: A0A0A0KNB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517290 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.5e-109
Identity = 200/214 (93.46%), Postives = 208/214 (97.20%), Query Frame = 1 

Query: 1   MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE 60
           MTGKETYG NASKCS+EDIVL SLVDAFGS+FSLEEIASAYFKAGYKADLAGEILFQM+E
Sbjct: 1   MTGKETYGTNASKCSQEDIVLKSLVDAFGSKFSLEEIASAYFKAGYKADLAGEILFQMQE 60

Query: 61  STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK 120
           STS+SAL+DDVGNGDNLGKGKVSEKKYQVKGNLK AK KVQ FSTGTVSNIIGKEYACSK
Sbjct: 61  STSSSALSDDVGNGDNLGKGKVSEKKYQVKGNLKAAKSKVQSFSTGTVSNIIGKEYACSK 120

Query: 121 PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180
           PSGN FTKVNKPVKVE+KVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV
Sbjct: 121 PSGNKFTKVNKPVKVEVKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180

Query: 181 IREVIGSCGYDMKKSMENLLNRSTTPVDERLGSG 215
           IREVIG+CGYDMK+SMENLLNRSTTPVDERLGSG
Sbjct: 181 IREVIGTCGYDMKESMENLLNRSTTPVDERLGSG 214

[Close]
BLAST of MELO3C007288 vs. TrEMBL
Match: A0A0L9VFF5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g245000 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 1 

Query: 5   ETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSN 64
           E  G N  KC EE   L  L+DAFGS FSLEEIASAY KA   ADLAGEILF+M+ S++ 
Sbjct: 2   EVSGQNVVKCDEEK-ALKCLLDAFGSAFSLEEIASAYCKASRNADLAGEILFEMQGSSTG 61

Query: 65  SALNDDVGNGDNLGKGKV-SEKKYQVKGNL---KTAKLKVQPFSTGTVSNIIGKEYACSK 124
           S+   D  N D   +G   S   Y ++ +    KT++ KV+P S GTVS+IIGK Y    
Sbjct: 62  SSSTLDSSNADVRTEGSSESSDGYSIENSFQERKTSRPKVRPVSAGTVSSIIGKNYVRPA 121

Query: 125 PSGNNFTKVNKPVKVEMKVLH-----ESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFR 184
           PS N  ++  KP K++ K L         ++ D +S   D  LH +MEDFLFKMLGDGF+
Sbjct: 122 PSANGSSRTTKPTKLDAKSLPMTGIWREKNKPDVSSSKHD-QLHQDMEDFLFKMLGDGFQ 181

Query: 185 LKREVIREVIGSCGYDMKKSMENLLNRSTTPVDER 211
           L R +IR+V+ +CGYD++KS+  LL++S     +R
Sbjct: 182 LDRNMIRQVLDTCGYDIQKSLVKLLDQSNMASGKR 214

[Close]
BLAST of MELO3C007288 vs. TrEMBL
Match: A0A0S3S2L4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G040900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-38
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 1 

Query: 5   ETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSN 64
           E  G N  KC EE   L  L+DAFGS FSLEEIASAY KA   ADLAGEILF+M+ S++ 
Sbjct: 2   EVSGQNVVKCDEEK-ALKCLLDAFGSAFSLEEIASAYCKASRNADLAGEILFEMQGSSTG 61

Query: 65  SALNDDVGNGDNLGKGKV-SEKKYQVKGNL---KTAKLKVQPFSTGTVSNIIGKEYACSK 124
           S+   D  N D   +G   S   Y ++ +    KT++ KV+P S GTVS+IIGK Y    
Sbjct: 62  SSSTLDSSNADVRTEGSSESSDGYSIENSFQERKTSRPKVRPVSAGTVSSIIGKNYVRPA 121

Query: 125 PSGNNFTKVNKPVKVEMKVLH-----ESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFR 184
           PS N  ++  KP K++ K L         ++ D +S   D  LH +MEDFLFKMLGDGF+
Sbjct: 122 PSANGSSRTTKPTKLDAKSLPMTGIWREKNKPDVSSSKHD-QLHQDMEDFLFKMLGDGFQ 181

Query: 185 LKREVIREVIGSCGYDMKKSMENLLNRSTTPVDER 211
           L R +IR+V+ +CGYD++KS+  LL++S     +R
Sbjct: 182 LDRNMIRQVLDTCGYDIQKSLVKLLDQSNMASGKR 214

[Close]
BLAST of MELO3C007288 vs. TrEMBL
Match: W9S9N0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014531 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-37
Identity = 91/211 (43.13%), Postives = 130/211 (61.61%), Query Frame = 1 

Query: 10  NASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSNSA--- 69
           + S+ ++E+  L  L+DAFGS F+L+EIASAY KAG  ADLAGE L++M+ + S S    
Sbjct: 4   SGSEYNDEERALKGLLDAFGSAFTLDEIASAYCKAGRNADLAGEFLYEMQGNASTSTDHP 63

Query: 70  -----LNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSKP 129
                   +  +  +     VSE+ Y+V GN +    K +P S G+VS+IIGK+Y  +  
Sbjct: 64  VDGETKGSEQSSASSCANDNVSEQSYEVNGNSRPTNPKNRPVSVGSVSSIIGKDYVRTTR 123

Query: 130 SGNNFTKVNKPVKVEMKVLH--ESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKRE 189
             N      KP+K+E KVL   E   E   ++   D  +  +ME+FLF+MLGDGFRL+R 
Sbjct: 124 PTNGSCNATKPMKLESKVLPVPELWEEEAKSNSERDDSIRRDMEEFLFRMLGDGFRLERN 183

Query: 190 VIREVIGSCGYDMKKSMENLLNRSTTPVDER 211
           VI EV+ +CGYDM K+ME LL+ STT +D++
Sbjct: 184 VIEEVLDACGYDMPKTMEKLLDLSTTALDKK 214

[Close]
BLAST of MELO3C007288 vs. TrEMBL
Match: V7BQD1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G186500g PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 98/213 (46.01%), Postives = 131/213 (61.50%), Query Frame = 1 

Query: 5   ETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMREST-S 64
           E  G N  KC EE   L  L+DAFGS FSLEEIASAY KA   ADLAGEILF+M+ S+  
Sbjct: 2   EVSGQNIVKCEEEK-ALKCLLDAFGSVFSLEEIASAYCKASRNADLAGEILFEMQGSSLG 61

Query: 65  NSALNDDVGNGDNLGKGKV-SEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSKPS 124
           +S+   D  N D   +G   S   + ++ + +  K KV+P S GTVS+IIGK Y    PS
Sbjct: 62  SSSTTLDSSNTDIRTEGSSESSDGHSLENSFQERKTKVRPVSAGTVSSIIGKNYVRPAPS 121

Query: 125 GNNFTKVNKPVKVEMKVLH-----ESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLK 184
            N      KP+K++ K L         ++ D +S   D  LH +MEDFLFKMLGDGF+L+
Sbjct: 122 ANGSFGTKKPIKLDAKSLPMTGIWREKNKPDVSSSKHD-QLHQDMEDFLFKMLGDGFQLE 181

Query: 185 REVIREVIGSCGYDMKKSMENLLNRSTTPVDER 211
           R +IR+V+ +CGYD++KS+  LL++S     +R
Sbjct: 182 RNMIRQVLDTCGYDIQKSLVKLLDQSNMASGKR 212

[Close]
BLAST of MELO3C007288 vs. TAIR10
Match: AT3G15390.1 (AT3G15390.1 silencing defective 5)

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27
Identity = 78/209 (37.32%), Postives = 109/209 (52.15%), Query Frame = 1 

Query: 10  NASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSNSALND 69
           ++S    +   L  L+D FGS FSL++IA+AY +A    D+AGEIL  M E T      D
Sbjct: 6   SSSNSDPDSRSLQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAEKTPQC---D 65

Query: 70  DVGNGDNLGKGKV----SEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSKPSGNN 129
            V       K        E   Q     K  + K    S GTVS++IGKEYA ++P  N 
Sbjct: 66  QVEMKTATSKPTQVYVPKEVPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNA 125

Query: 130 FTKVNKPVKVEMKVLHES---------SSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRL 189
             +  KP+K+  + + E+         S+EG  +  P+D      +E+F+ KMLG+GF+ 
Sbjct: 126 PKEATKPLKINSRDIPETEIWSEEMRKSNEGKISRAPTD------VEEFIVKMLGEGFQA 185

Query: 190 KREVIREVIGSCGYDMKKSMENLLNRSTT 206
            +EVI +V+G CGYD+KKS E LL+ S T
Sbjct: 186 SQEVIHQVLGVCGYDVKKSTEKLLDFSDT 205

[Close]
BLAST of MELO3C007288 vs. TAIR10
Match: AT5G58720.1 (AT5G58720.1 smr (Small MutS Related) domain-containing protein)

HSP 1 Score: 51.2 bits (121), Expect = 9.8e-07
Identity = 34/108 (31.48%), Postives = 52/108 (48.15%), Query Frame = 1 

Query: 104 STGTVSNIIGKEYACSKPSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEME 163
           +TG VS++I K+Y   KP+         PV+ E  ++  S          +D     + E
Sbjct: 146 ATGMVSSVIAKDYL--KPN---------PVRKEFPMMERSKELCGNGKKAAD---REKAE 205

Query: 164 DFLFKMLGDGFRLKREVIREVIGSCGYDMKKSMENLLNRSTTPVDERL 212
            FL  MLGD   L   V+R+V+  CGYD+  ++  LL+ S++  D+ L
Sbjct: 206 QFLSSMLGDDCELSMAVVRDVLCQCGYDVDMALNVLLDMSSSSTDDSL 239

[Close]
BLAST of MELO3C007288 vs. NCBI nr
Match: gi|659078707|ref|XP_008439864.1| (PREDICTED: uncharacterized protein LOC103484526 isoform X1 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.4e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1 

Query: 1   MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE 60
           MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE
Sbjct: 1   MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE 60

Query: 61  STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK 120
           STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK
Sbjct: 61  STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK 120

Query: 121 PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180
           PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV
Sbjct: 121 PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180

Query: 181 IREVIGSCGYDMKKSMENLLNRSTTPVDERLGSG 215
           IREVIGSCGYDMKKSMENLLNRSTTPVDERLGSG
Sbjct: 181 IREVIGSCGYDMKKSMENLLNRSTTPVDERLGSG 214

[Close]
BLAST of MELO3C007288 vs. NCBI nr
Match: gi|449433849|ref|XP_004134709.1| (PREDICTED: uncharacterized protein LOC101206014 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 6.4e-109
Identity = 200/214 (93.46%), Postives = 208/214 (97.20%), Query Frame = 1 

Query: 1   MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE 60
           MTGKETYG NASKCS+EDIVL SLVDAFGS+FSLEEIASAYFKAGYKADLAGEILFQM+E
Sbjct: 1   MTGKETYGTNASKCSQEDIVLKSLVDAFGSKFSLEEIASAYFKAGYKADLAGEILFQMQE 60

Query: 61  STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK 120
           STS+SAL+DDVGNGDNLGKGKVSEKKYQVKGNLK AK KVQ FSTGTVSNIIGKEYACSK
Sbjct: 61  STSSSALSDDVGNGDNLGKGKVSEKKYQVKGNLKAAKSKVQSFSTGTVSNIIGKEYACSK 120

Query: 121 PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180
           PSGN FTKVNKPVKVE+KVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV
Sbjct: 121 PSGNKFTKVNKPVKVEVKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180

Query: 181 IREVIGSCGYDMKKSMENLLNRSTTPVDERLGSG 215
           IREVIG+CGYDMK+SMENLLNRSTTPVDERLGSG
Sbjct: 181 IREVIGTCGYDMKESMENLLNRSTTPVDERLGSG 214

[Close]
BLAST of MELO3C007288 vs. NCBI nr
Match: gi|659078715|ref|XP_008439868.1| (PREDICTED: uncharacterized protein LOC103484526 isoform X2 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 1 

Query: 1   MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE 60
           MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE
Sbjct: 1   MTGKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRE 60

Query: 61  STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK 120
           STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK
Sbjct: 61  STSNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSK 120

Query: 121 PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180
           PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV
Sbjct: 121 PSGNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREV 180

Query: 181 IREVIGSCGYDMKKS 196
           IREVIGSCGYDMKK+
Sbjct: 181 IREVIGSCGYDMKKT 195

[Close]
BLAST of MELO3C007288 vs. NCBI nr
Match: gi|951046349|ref|XP_014519156.1| (PREDICTED: putative nuclear RNA export factor SDE5 [Vigna radiata var. radiata])

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 101/215 (46.98%), Postives = 133/215 (61.86%), Query Frame = 1 

Query: 5   ETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSN 64
           E  G N  KC EE   L  L+DAFGS FSLEEIASAY KA   ADLAGEILF+M+ S++ 
Sbjct: 2   EVSGQNIVKCDEEK-ALKCLLDAFGSAFSLEEIASAYCKASRNADLAGEILFEMQGSSTG 61

Query: 65  SALNDDVGNGDNLGKG-KVSEKKYQVKGNL---KTAKLKVQPFSTGTVSNIIGKEYACSK 124
           S+   D  N D   +G   S   Y ++ +    KT++ KV+P STGTVS+IIGK Y    
Sbjct: 62  SSSTLDSSNADVRTEGSSESSDGYSIENSFQERKTSRTKVRPVSTGTVSSIIGKNYVRPA 121

Query: 125 PSGNNFTKVNKPVKVEMKVL-----HESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFR 184
           PS N   +  KP K++ K+L         ++ D +S   D  LH +MEDFLFKMLGDGF+
Sbjct: 122 PSANGSFRTTKPTKLDAKLLPMTGIWREKNKPDVSSSKHD-QLHQDMEDFLFKMLGDGFQ 181

Query: 185 LKREVIREVIGSCGYDMKKSMENLLNRSTTPVDER 211
           L R +IR V+ +CGYD++KS+  LL++S     +R
Sbjct: 182 LDRNMIRLVLDTCGYDIQKSLVKLLDQSNMTSGKR 214

[Close]
BLAST of MELO3C007288 vs. NCBI nr
Match: gi|920712542|gb|KOM53791.1| (hypothetical protein LR48_Vigan09g245000 [Vigna angularis])

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 1 

Query: 5   ETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMRESTSN 64
           E  G N  KC EE   L  L+DAFGS FSLEEIASAY KA   ADLAGEILF+M+ S++ 
Sbjct: 2   EVSGQNVVKCDEEK-ALKCLLDAFGSAFSLEEIASAYCKASRNADLAGEILFEMQGSSTG 61

Query: 65  SALNDDVGNGDNLGKGKV-SEKKYQVKGNL---KTAKLKVQPFSTGTVSNIIGKEYACSK 124
           S+   D  N D   +G   S   Y ++ +    KT++ KV+P S GTVS+IIGK Y    
Sbjct: 62  SSSTLDSSNADVRTEGSSESSDGYSIENSFQERKTSRPKVRPVSAGTVSSIIGKNYVRPA 121

Query: 125 PSGNNFTKVNKPVKVEMKVLH-----ESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFR 184
           PS N  ++  KP K++ K L         ++ D +S   D  LH +MEDFLFKMLGDGF+
Sbjct: 122 PSANGSSRTTKPTKLDAKSLPMTGIWREKNKPDVSSSKHD-QLHQDMEDFLFKMLGDGFQ 181

Query: 185 LKREVIREVIGSCGYDMKKSMENLLNRSTTPVDER 211
           L R +IR+V+ +CGYD++KS+  LL++S     +R
Sbjct: 182 LDRNMIRQVLDTCGYDIQKSLVKLLDQSNMASGKR 214

The following BLAST results are available for this feature:
BLAST of MELO3C007288 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDE5_ARATH6.8e-2637.32Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana GN=SDE5 PE=2 SV=... [more]
BLAST of MELO3C007288 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNB3_CUCSA4.5e-10993.46Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517290 PE=4 SV=1[more]
A0A0L9VFF5_PHAAN1.4e-3846.51Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g245000 PE=4 SV=1[more]
A0A0S3S2L4_PHAAN1.4e-3846.51Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G040900 PE=... [more]
W9S9N0_9ROSA2.7e-3743.13Uncharacterized protein OS=Morus notabilis GN=L484_014531 PE=4 SV=1[more]
V7BQD1_PHAVU1.3e-3646.01Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G186500g PE=4 SV=1[more]
BLAST of MELO3C007288 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15390.13.8e-2737.32 silencing defective 5[more]
AT5G58720.19.8e-0731.48 smr (Small MutS Related) domain-containing protein[more]
BLAST of MELO3C007288 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078707|ref|XP_008439864.1|8.4e-117100.00PREDICTED: uncharacterized protein LOC103484526 isoform X1 [Cucumis melo][more]
gi|449433849|ref|XP_004134709.1|6.4e-10993.46PREDICTED: uncharacterized protein LOC101206014 [Cucumis sativus][more]
gi|659078715|ref|XP_008439868.1|2.5e-10599.49PREDICTED: uncharacterized protein LOC103484526 isoform X2 [Cucumis melo][more]
gi|951046349|ref|XP_014519156.1|1.6e-3846.98PREDICTED: putative nuclear RNA export factor SDE5 [Vigna radiata var. radiata][more]
gi|920712542|gb|KOM53791.1|2.0e-3846.51hypothetical protein LR48_Vigan09g245000 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU64307melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007288T3MELO3C007288T3mRNA
MELO3C007288T2MELO3C007288T2mRNA
MELO3C007288T1MELO3C007288T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU64307MU64307transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007288Csa6G517290Cucumber (Chinese Long) v2cumeB507
MELO3C007288Cla009614Watermelon (97103) v1mewmB572
MELO3C007288ClCG01G022910Watermelon (Charleston Gray)mewcgB515
MELO3C007288Cla97C01G022810Watermelon (97103) v2mewmbB515
MELO3C007288Bhi03G000326Wax gourdmewgoB635
MELO3C007288CSPI06G34560Wild cucumber (PI 183967)cpimeB512
MELO3C007288Cucsa.046170Cucumber (Gy14) v1cgymeB027
MELO3C007288Lsi01G003220Bottle gourd (USVL1VR-Ls)lsimeB149
MELO3C007288Cp4.1LG19g07310Cucurbita pepo (Zucchini)cpemeB457
MELO3C007288CsGy6G034100Cucumber (Gy14) v2cgybmeB445
MELO3C007288CsaV3_6G050080Cucumber (Chinese Long) v3cucmeB520
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007288Cucumber (Chinese Long) v3cucmeB092
MELO3C007288Cucumber (Chinese Long) v3cucmeB333
MELO3C007288Watermelon (97103) v2mewmbB523
MELO3C007288Watermelon (97103) v2mewmbB531
MELO3C007288Wax gourdmewgoB673
MELO3C007288Melon (DHL92) v3.5.1memeB075
MELO3C007288Melon (DHL92) v3.5.1memeB100
MELO3C007288Cucumber (Gy14) v1cgymeB201
MELO3C007288Cucumber (Gy14) v1cgymeB249
MELO3C007288Cucurbita maxima (Rimu)cmameB211
MELO3C007288Cucurbita maxima (Rimu)cmameB381
MELO3C007288Cucurbita maxima (Rimu)cmameB618
MELO3C007288Cucurbita maxima (Rimu)cmameB798
MELO3C007288Cucurbita moschata (Rifu)cmomeB195
MELO3C007288Cucurbita moschata (Rifu)cmomeB373
MELO3C007288Cucurbita moschata (Rifu)cmomeB606
MELO3C007288Cucurbita moschata (Rifu)cmomeB782
MELO3C007288Wild cucumber (PI 183967)cpimeB086
MELO3C007288Wild cucumber (PI 183967)cpimeB329
MELO3C007288Wild cucumber (PI 183967)cpimeB575
MELO3C007288Cucumber (Chinese Long) v2cumeB083
MELO3C007288Cucumber (Chinese Long) v2cumeB330
MELO3C007288Cucumber (Chinese Long) v2cumeB564
MELO3C007288Watermelon (Charleston Gray)mewcgB512
MELO3C007288Watermelon (Charleston Gray)mewcgB524
MELO3C007288Watermelon (97103) v1mewmB563
MELO3C007288Watermelon (97103) v1mewmB598
MELO3C007288Cucurbita pepo (Zucchini)cpemeB046
MELO3C007288Cucurbita pepo (Zucchini)cpemeB061
MELO3C007288Cucurbita pepo (Zucchini)cpemeB485
MELO3C007288Cucurbita pepo (Zucchini)cpemeB740
MELO3C007288Bottle gourd (USVL1VR-Ls)lsimeB119
MELO3C007288Bottle gourd (USVL1VR-Ls)lsimeB228
MELO3C007288Cucumber (Gy14) v2cgybmeB076
MELO3C007288Silver-seed gourdcarmeB0153
MELO3C007288Silver-seed gourdcarmeB0177
MELO3C007288Silver-seed gourdcarmeB0554
MELO3C007288Silver-seed gourdcarmeB0642
MELO3C007288Silver-seed gourdcarmeB0931