Lsi01G003220 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G003220
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSmr domain-containing protein YPL199C, putative isoform 1
Locationchr01 : 2836939 .. 2845550 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTATTGAGGGAGAAAAGATGATTGAAGAAAATAAAAACATCAATGAAAAATGGAAAGGAAATCAATATTAATCTTCACTTTCAGAACATACCTTGATGATGATGCCTCTGTTTTGAAATCGAATATTGGTGATGGTTGGAATCGTCAGGAACCGAAAGGCAAGCAATATGGAACGGATTTTTTTTTTTTTCTTTAAAAATGAGATATTTTTCAGAAAAATATTATAAATAAAAAAATATCAAACTATTTATAAATATAGAAAAATTTCATAAAATTTTCTATATTTATAAAATCAGATAGGCGTTTGAAACTATTTTTAGTGGGTGATTTTTTCCCGTTTTACCTTCTGTTTAAAGTTTTCAACAACCCAAAATTCAAATTACTTGATTCATAAATCATAACCTAATTTTCTCTTTCTTTTTTTAGAAGGATTTTCTCCTCTTTAGATTTGATTTACCCTTTCGTTTTTTAGAATTCACAGAAATCTGAAAATAGTTTTTAAACATACTGTCAAATTTGGTGAATAGAAAATATATATAATAAATATACGACTTATCAAATTGTTCACGTGAGTGAAAATTTTCTATACTACCTTTACTTGTTGTGAGATCTATTAATATTATTGTGGGGTTCATAAATATTAATAAAGACAAATTTATAGTGCGAACAAGGAGTATAGTACTATGAGAGTACTATAAATTTTTAGTTTGAAATTATTTTAAAATAATTAGACTTTTAATCCTTGACAATCAATTTAATATTTTTTTTTTTACATTTTTAAACGGTAATTTTCATAAATAAAAATTGATTTAAAATTATTACAAATATATTTAAGAGTGATTTTAAATATGATACAAATGTGATTTTAATTATAGTAAAATAACTCAAACATATCAAAATTTTTAAAAATAGAAAAATAAGAGAAATTATTTACACAAAATAACAATTTTTTTAGATAGGTGTGAAATAGAAGTCTATAATGTTTATCAATGTTATTTTTCTATATGTGAGAATTTCTCCAAATTATTCTCAATTAAGTTATTTCATTTAAAAAACAAACAAAACATGCAAAATAAGTTGGTGCTGACTTTATTTTCTTTCACCAAATAACTTATACAATATACACCCACATCTAAATAAAAGATTTATTTTTATTTTTTATTTTTTTTATTTTTTTTTTTTTAAGTTTCACAATGAAGGAAATTGATCGATTTTTAATTCCAAAAGAGAATTGATGTTTAGATTAGTATAAAAAAACATGCTTAACAACAACAAAAACATCACTTTGTTAAACAATTTAACTCAACTAACATGAAAAAAAAAAATAAAAATTAGACGGTTTGATAATTATTTGATATTTTATTTTTGAAAATTAAACATATTTATTTACATTTTCTTTACCATAGTTTGCATTTTTTTTAAGTACAAGAATTGAATTACTAGTCAAATTCTAAAAATGGAAATAAGTTTTTAAAAACTATTTTTTTAGTTTTCAAATTTTAGTTTGGTTTTTAAAAACATAGATAAAAAATAGATAAGAAAACAAGACATTTGGGGGTGAGAGAGGTATTTGTAAGCTTAATTTTAAAAAATAAAAACTAAAAACTCGTTTGGTAACCATTTAGTTTTTTGTTTTTGGTTTTTGAAAATTATATTTATTTTCTCTCTATTTTTTAGCATGACTTACATCTTTTTAAGTGTAATGGTTGAATTCTTAACCAAATTAAAAAAATAAAAATAAGTTTTTAAAAACTATTTTTTTTAGTTTTAAAAATTTGACTTGATTTTTTAAATTTAAAGATAGAAGTAGTGTGTATAGACTTAATTTTCAAAAACTAAAAATAAAAAACATATTAATTACCAAAGGAGACTCAAATAATTGTGAAACGAAAACGAGACTTAGTATTGATTTGGGCAAGTAAAAGTACCTACTTAAAAAACAGAAAACGGTTTGATCATGACGATTTAAGAAAGGAAATTCGAATATTATTTTCCAATAATATACGAATTATTGTCGGTATTACCTATTACCACAATATCTAAAATTAATTTATTTTCATCCCCCACATGAAAAAGAATTCCCCCACACAGTACACTTGTTTTAGCTTCTTTTGGTGGACGTGGATTTACGCGTGGGAAGAATCAAATCAAAACTTCGCCTCGAAGCGAGCCCATCGAGGCGCCAAAAAGCACTTCGATTATCCTCTTGTTCTGATCATTTCGATTGCTTTTGTTTATCCAAGTGGGTTGCGGCGCCCACTCACTACTCAGTATTTTCTCATTGCCGCTGCCGGTGACATCACTTTACCCAACTCCGACCAAGCACACCCAGGTTAGTTCTTTTCGAAAATCTTTGTTTGAAGCTTGAGTTCTTCCCAGGTTGAAATTTGTACTTATTTGTTTGTGATTTTCAGTTTTAGCTTCTTTAACTTCTGCATTTTGATCGGGTATCCGTTTCTTGTTCGACATTTTGATTCTAATGAACTAGTATTTCTATTGTATTATTTGGTTCCCAGTATTTTCCTTTTCTGTTTCTTTCACTTTCTTTCGGATCTTTATTTGGTTTTCATCCGTGTGTGAGCTTGCATGGTCTTCATAATATAAGTAAGTGTGAATGTATATAGAGAATGAAACAGCGAAATCAAGTATTGTCACTCAGATAATTTATGGATATACGCAGACGAACTGGTAATTTCTTCCATGAGATGCTACGACTTTAAAGAACACAGGCTTCAGTGGGACATTGGATTAAAAAGGCGACTGTTGTAGTGAAAGATGCTGTCGGATCGATACAATGGAGACCCATTCTTAGAGTCACTGCGTGTTCTCCACCCACTTAATGACATAGAAAACTAAAAGATTTTACATGTACAATCATCCATTAGTTTTTTTTTATTTTTCTGTCCCTTATATCGGCTATAACTTCTTTTCTTTGTTTCTGGCAGTTATGTGTTACTGGTTTATGCATGAATCTACGACGTCCATAGCCTTTACCATTTTAATCCTTTATTTGGGATGTGTTAGTTAACCACCCCCCTTTATTTAATATTTCTAAAATCTTTATGATTTTACTGGTTTCCATCATGGTTAACCCCGGACATAATGGAAATAATTTCACATTTCAGTTTTAATTTTTAGTGTAAGTTGCTCACTGTAGAAATGTATTTGATCTTTGCTTTACCACTTTCTATGATTTGAAAAGAATGACAGGGAAGGAAACATATGGAGTGAATGCATCAAAATGTGCCGAGGAGGATGTCGTGCTAAAGTCTTTGATTGATGCCTTTGGCTCTGCATTTTCACTTCAGGAAATAGCTTCTGCTTATTTTGAGGCAGGCCATAAGGCAGACTTGGCGGATGAAATCCTATTTCAAATGCAGAGAAGCACCTCTAGCTCTGCATCGAATGGTGAGGTTGGAAATGGAGATAGTTTGGGTAAGGGAAAAGTGTCTGAGAAGTCATATCAGGTCAAAGGGAACCTGAAAACTGCAAAGGTAAAGGTTCAGCCTTTTTCAACAGGCACAGTTTCCAACATTATTGGTAAAGAATATGCTTGTTCCAAGCCATCAACAAATAAGTTTACCAAGATATATAAACCGGTAAAGGTGGAGGTAAAGCTTTTGCATGAATCTTCAAGTGAAGGACATTGTACAAATATACCCAGTGACTTCCACCTGCATCATGATATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAAAGGGAAGTGATCCGAGAAGTTCTTGGTAGGCTGTTATCTTTATCTCTGCCAGTTATCTTCAATCTTACCTCTTAAATATCAATTCATTGAAAAATAACTGGATTGCCCTATTCTGATTGCTTTTATGTTCATGAGGAGTTTATTCTGTTGATGTAATCATAGATTGGATCTAGTAGACTAAAACTTTTATTATCTTGCAAAATGGGTTTAACCTTACTCATATTATGTACCCAAAGACCATGAAAGTTTAATTGTGCATGAAGACTGTTAGAATCAATGGCTGTCTTTGGAATCATGTTAGAAGTTAATGGGTCAGAACTCTACAATGGTAGTTTTAAAGAACTCTTTTAGGGGGGTGTTTGGCTCACCAACTTCATAAGTTGGTGTTAAATAACTCAACTTCAATAGTGTTTACTATTGAAGTTTGCACATTTATCGAAAAACTCCATCTTACAACTCTGCATCCAAACACAAACTTCTTAATTCCTACATATTAACTCCAGACTTCATAACTCAACTTAGTGCCCCAAACACCTCATTATTTTCTTGTTTCATCTCAACTTTATGCATTGTCAAGACATAAGAACTTTGTTAGTTAGCATCTTAAATATAAAAGCAATGAACCAACAGCAGCCTTGGAATTTATATCCAAACAGTTATCATTTCAGTGCTTTAACTAGTTTCTGCCTTTCTGAGGAACATATGCTTCAAGTCAACATTATCGGTCACAACTAATGTTAAATTATAGAAGTAATAACTCCACTGACTGTCAACCTACCGAAAACCTTCTATCATAATTTCATTGTATTCCTTAATTCTAGGATTACTTAAGCGAAGCGATTAACATAAAATTAGGTTTTTATTTCTTCAAACAGAAATTCCCTGGTGAATTATGGTTCTCTCACATCAAAGTGAAGTAATTGTTTAAATATTATTTAAGTTTCTTATCATTTCATCACCATTTTATAGGATTCTGTTAGTCTCTGTAACCTTTCTGCTTAGTATCCAATATATATTTATGTCGCTGATGGTTTGAGATATGTATATAAAAGCAAATTCTGCATGCTATGCCATGCTCCAGTATTTGCCCCAGCCAGCCTTATAAGGGAAAGTTGTTGCAGCCTGCAGGCAACTTAATTTGGAAAAAGAAAATTATTTCGGTATATATAAGCTTAGAAGAGAGTTTAAAACAAAAAAAATAACATTAATAAAAAAATTGCTATCTATTGCAATAGAGTTTTATATTTATTGTGTTTTTTGTAGTCTACTAGTATAAGTATGGATACTGGCTTCTTATTGAAATGCTTGCTATTGATTAAGATATTACCAGTTAATAAGATTTGTATTATTACTGCAGGCAGTTGTGGATACGATATGAAAAAGGTATGCAAAATGCCAGTTTTAATGGCTTTTCCAGTCTCTGGTGGTTTCGAGAATTGCGGTCCTGAATGGAGTTCATATTCTCTTTATGGCCTTCAGCAGTTTTCTGATACCTCCAGCTCTCCTTGAATTTGGATATGTCATGAATGACCTCTTGAAATTTATTTCCCACCTTTATTTTTTATTTAGTTAGAATCCATGTTGCAGATGCTCCTCCTGTTATTGGGCTTCAGCAGTTGTTGTTCCTTTAAAAAAAAAACACTTTTTATAACTCTCTCTCACAAATTTGATATGTCAGGACTTCTTGAAATTTATTGCCCACCTTTATTACTTATTTAGTGAAAATCCGGGAAATATTCCAGAATTAATCCAAGAAATTAGTTGGACAAATTAATTAACTGATTTGAAATGCTGCACGCTAACCTGACACTGGTAGGGTGTTGGGGTGGCCAGTAAAACATAGGTATCAAATGGCCTTGCACGGCAGCTAAGGCTGTGAATACCTACGATGGGTTGGAGATCTTAACTTTAGAAACACTGAAGTTCATATTTTGCATATGTTCCTAGTTTGATTTATAATGACATTTTAGGCAATGTCTTGTGTAGAAAAGCACATGCTGGTGCTGCCACATACCTTTTCTTGTTTTGAAGGCACTTGCCTACTGAAGCCTTGCATTTAGTTTCGTGTGATGATAAAATTATTGTGAAAGTTATATATTTTCTCAGTTTCTCATTAAAAAAACAAATATTTTGCAAGCTACTTGATGATTCAATCATCTTGCATCTTCCAGAAAATTTCTGCTCTCTAACATCATGAGCAGACATGCGTATTACGTTTTGCTTGTCTATTTCTTAGCAAGATATTTTACCATAAGACTTCTCAAGAATATCCTTTTGAGTTTTCAGAGTATGGAGAGTTTGCTTAATCGGTCAACAGCAGTGGATGAAAGACTTGGTTCGGGTAATAAGTCCACTGACATGGTTAGTATGACTTCAGTACTTGTTTTCACATAGCAAATAGTTTGAATAGTCGTTATACTCATGAAACTTTTGTAGGTTTGTCCCTGGTTAGAGTTATGGTGAAAGTTCCTATTATAACTTATAAGTTACATCGTTGTGTGAATATAGAATCATCTTTTTACTTTGTGAGATATAAGTTATGTTGTGTTAGTTTCCTTCAGCTTTGAATACTTTTGTGTGGCATTAATGTCTCCGAAGTTCCCTTTCCTCCCACAATCAGCGTTTCCAAAGTTGAGCTTGGGTGGATTGCTTGTGGTGATGGGTGAGGCAAGACGTGGTTGTCTGTGGCAAGCACCTTTACTCAGGCAAACTGCCTAGGTCCTGTCACCATTTTGATCAACTTTTGGTTTGCTTACCGAAGAAAACTGGACCTTTCACATTATTTCTTTTAAGAATTATGACTCTTGAAACTATGTAGCAGAGTAATATATGAAATAAGATCTTATTTATGCCTCATCCAAAAAGAAAAAAAAGATCTTTTATGCCCAATTTTATGTTAATGTTATATACGTATGGGTGTATCTATGTATATGCATAGCGTATGTATGCATAATAAGTATCTCGCTACCAACCTTAGAATAACTCAACTAGTTAAGGCAAATAATGTCGATCAAGTGGTCAAATGTTTGAATTTTCTCTCCCCACATTGTTGATCTCCCAAAAAAAGAAAAAAGAAAAAATAAAGCACCTCACTTCACTCCGACTATGTTTTTTATGTGCCCCTCACCTCCAGTCCAACAGACGAGAAACTTGTTATCTTGGAGTCCTTCCCTTTGGAAACATTGTGCACAACTTCACACATGGTATTGTTTTTTAATTTGGTACATCTTTTTTTTACTCTATAATACAAGTTAGTGGCTGTAAGCTACACTCTGACCTATTGTAAATGTAGGGCTTTGATGGGTAGGACTAGCTATTAGATTCTTTTTCATAAATTACGGGAAATAAAGTTTTGTTGTACTTTTGGATGTGTTTTCTTTCTTACCCGAGTGATTTCCTTTTGCAGACTGCAGCTTCGTGTTCGAGAACAGATTTAATATCATGTCAGAAAAATAAGGCAGACAACCATTATCCTGGAGGGTAAATATCTTTCCAATTTCAATCTGGTAGCTTGGGTGTCATTGTTCAAAGTGTTTTTTGTATTCTTTTAGCACAAATATTATGTTCAGGATTTTCCTTGATATTCTAGTAACCTGGACAAGACTTCTTAGACTTCTTAGTGTACAAAGTACTTGTTACTCATTCCCGAAGTTAATGTTCATTTCTGGTCATCTAGGAATGGAAATATGGCCTCAAGCAAAAAAGTCTTGGAGTTGACTAACCTGGAGAAGACCAGAAGTGATCTTCAAAAAGAGGTTTTGACTGCATTATTTAATGCTTCTGAGGAACCAGAAGAGGAGTCACCAAGAAGAGCAGTACCAAGGAGGCAGCAGTTTGGAGCATATGGACGATTGGTGAGTGAACCGTTCAAAGATATGGATGCAGAGTGTGAGAAGCATGTGGAGTACAAGGAGCAAACTGATTTGGATGGTAACATCGGAATTATCTTCTTTAACATCTATTTATGGGTCTTAGATGCTTGAAAGATTGGCTGTGAATTCTAATGAAAATAGATTAGCAATGTCAATTTCTTACTTTCTGAACTCTTAATATTCTATATCTTATTATTCAAATTTTCAAATGATTAAAGTTTCTTTCTAACTGTATCATTGATTGTATAAGTAAATTACCAAAATTTACGGAGTATTTTAGTCTTTTTAACTGATTGCTTTCGGGATTGGTACATCATATCATATCATGATTATCATATTTTAAAGAAATCAGAAAGCTCCATGTGATTGCATCATTTAGCATAACAAATGGGTAGATAAAGTAGATTGGTGGTGCATACATTATTGAAATGTTCTGTGCTCCTACTGCACAGTTCAAGAAGTACTGAATAGTCCTGCCATGTAAGACTCGTTAAAAGAGTGCTAGGAATAAAATTGATACTAGTTTGAGTTCATTTCTATATGTTCTAATCAGTTATTTTGGCCATTACAATATTCTTGATCCACCAGTACACTACAAATTGCAGTTGAGGACGAAGAAAATAGCTACCAACTTCTTCGTAAAGCTGTTAGGGAGTACCGGGGCACAATGAAGGAATATTATGCAGCAGTAGGTGGACTTTGTGCATTGTTTTGACTTTTCCACACTTGTAATCTGCCATAAGCTGGATTTTTCTGCGTCATTCGAATCACTTCTAAGATGAGAAAATCAATTTATTCATAGGCCATAGATGCATTTGCTAAAGGGGATTCTGTTCGAGCAGCCAAACTCATAGATGAGGTAATGGGGTAGTGTCTGTTGTCTTATGTTTCAATTTGTTTCTGTTTTGTTTTTTTAAATTAAGAAACAGAACTATTTCATTGAAGCGACGAGATGGCAAAAAGAAATTACCTCCAAAAACCCGAAGGACAAAAGATTATAG

mRNA sequence

ATGATCTTCTTTTGGTGGACGTGGATTTACGCGTGGGAAGAATCAAATCAAAACTTCGCCTCGAAGCGAGCCCATCGAGGCGCCAAAAAGCACTTCGATTATCCTCTTGTTCTGATCATTTCGATTGCTTTTGTTTATCCAAGTGGGTTGCGGCGCCCACTCACTACTCAGTATTTTCTCATTGCCGCTGCCGGTGACATCACTTTACCCAACTCCGACCAAGCACACCCAGGGAAGGAAACATATGGAGTGAATGCATCAAAATGTGCCGAGGAGGATGTCGTGCTAAAGTCTTTGATTGATGCCTTTGGCTCTGCATTTTCACTTCAGGAAATAGCTTCTGCTTATTTTGAGGCAGGCCATAAGGCAGACTTGGCGGATGAAATCCTATTTCAAATGCAGAGAAGCACCTCTAGCTCTGCATCGAATGGTGAGGTTGGAAATGGAGATAGTTTGGGTAAGGGAAAAGTGTCTGAGAAGTCATATCAGGTCAAAGGGAACCTGAAAACTGCAAAGGTAAAGGTTCAGCCTTTTTCAACAGGCACAGTTTCCAACATTATTGGTAAAGAATATGCTTGTTCCAAGCCATCAACAAATAAGTTTACCAAGATATATAAACCGGTAAAGGTGGAGGTAAAGCTTTTGCATGAATCTTCAAGTGAAGGACATTGTACAAATATACCCAGTGACTTCCACCTGCATCATGATATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAAAGGGAAGTGATCCGAGAAGATTACTTAAGCGAAGCGATTAACATAAAATTAGGCAGTTGTGGATACGATATGAAAAAGAGTATGGAGAGTTTGCTTAATCGGTCAACAGCAGTGGATGAAAGACTTGGTTCGGGTAATAAGTCCACTGACATGACTGCAGCTTCGTGTTCGAGAACAGATTTAATATCATGTCAGAAAAATAAGGCAGACAACCATTATCCTGGAGGGAATGGAAATATGGCCTCAAGCAAAAAAGTCTTGGAGTTGACTAACCTGGAGAAGACCAGAAGTGATCTTCAAAAAGAGGTTTTGACTGCATTATTTAATGCTTCTGAGGAACCAGAAGAGGAGTCACCAAGAAGAGCAGTACCAAGGAGGCAGCAGTTTGGAGCATATGGACGATTGGTGAGTGAACCGTTCAAAGATATGGATGCAGAGTGTGAGAAGCATGTGGAGTACAAGGAGCAAACTGATTTGGATGTTGAGGACGAAGAAAATAGCTACCAACTTCTTCGTAAAGCTGTTAGGGAGTACCGGGGCACAATGAAGGAATATTATGCAGCAGCCATAGATGCATTTGCTAAAGGGGATTCTGTTCGAGCAGCCAAACTCATAGATGAGAAACAGAACTATTTCATTGAAGCGACGAGATGGCAAAAAGAAATTACCTCCAAAAACCCGAAGGACAAAAGATTATAG

Coding sequence (CDS)

ATGATCTTCTTTTGGTGGACGTGGATTTACGCGTGGGAAGAATCAAATCAAAACTTCGCCTCGAAGCGAGCCCATCGAGGCGCCAAAAAGCACTTCGATTATCCTCTTGTTCTGATCATTTCGATTGCTTTTGTTTATCCAAGTGGGTTGCGGCGCCCACTCACTACTCAGTATTTTCTCATTGCCGCTGCCGGTGACATCACTTTACCCAACTCCGACCAAGCACACCCAGGGAAGGAAACATATGGAGTGAATGCATCAAAATGTGCCGAGGAGGATGTCGTGCTAAAGTCTTTGATTGATGCCTTTGGCTCTGCATTTTCACTTCAGGAAATAGCTTCTGCTTATTTTGAGGCAGGCCATAAGGCAGACTTGGCGGATGAAATCCTATTTCAAATGCAGAGAAGCACCTCTAGCTCTGCATCGAATGGTGAGGTTGGAAATGGAGATAGTTTGGGTAAGGGAAAAGTGTCTGAGAAGTCATATCAGGTCAAAGGGAACCTGAAAACTGCAAAGGTAAAGGTTCAGCCTTTTTCAACAGGCACAGTTTCCAACATTATTGGTAAAGAATATGCTTGTTCCAAGCCATCAACAAATAAGTTTACCAAGATATATAAACCGGTAAAGGTGGAGGTAAAGCTTTTGCATGAATCTTCAAGTGAAGGACATTGTACAAATATACCCAGTGACTTCCACCTGCATCATGATATGGAAGATTTTCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAAAGGGAAGTGATCCGAGAAGATTACTTAAGCGAAGCGATTAACATAAAATTAGGCAGTTGTGGATACGATATGAAAAAGAGTATGGAGAGTTTGCTTAATCGGTCAACAGCAGTGGATGAAAGACTTGGTTCGGGTAATAAGTCCACTGACATGACTGCAGCTTCGTGTTCGAGAACAGATTTAATATCATGTCAGAAAAATAAGGCAGACAACCATTATCCTGGAGGGAATGGAAATATGGCCTCAAGCAAAAAAGTCTTGGAGTTGACTAACCTGGAGAAGACCAGAAGTGATCTTCAAAAAGAGGTTTTGACTGCATTATTTAATGCTTCTGAGGAACCAGAAGAGGAGTCACCAAGAAGAGCAGTACCAAGGAGGCAGCAGTTTGGAGCATATGGACGATTGGTGAGTGAACCGTTCAAAGATATGGATGCAGAGTGTGAGAAGCATGTGGAGTACAAGGAGCAAACTGATTTGGATGTTGAGGACGAAGAAAATAGCTACCAACTTCTTCGTAAAGCTGTTAGGGAGTACCGGGGCACAATGAAGGAATATTATGCAGCAGCCATAGATGCATTTGCTAAAGGGGATTCTGTTCGAGCAGCCAAACTCATAGATGAGAAACAGAACTATTTCATTGAAGCGACGAGATGGCAAAAAGAAATTACCTCCAAAAACCCGAAGGACAAAAGATTATAG

Protein sequence

MIFFWWTWIYAWEESNQNFASKRAHRGAKKHFDYPLVLIISIAFVYPSGLRRPLTTQYFLIAAAGDITLPNSDQAHPGKETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSSSASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPSTNKFTKIYKPVKVEVKLLHESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIREDYLSEAINIKLGSCGYDMKKSMESLLNRSTAVDERLGSGNKSTDMTAASCSRTDLISCQKNKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRRAVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYRGTMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKEITSKNPKDKRL
Homology
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BLAST of Lsi01G003220 vs. Swiss-Prot
Match: SDE5_ARATH (Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana GN=SDE5 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.4e-33
Identity = 125/391 (31.97%), Postives = 192/391 (49.10%), Query Frame = 1 

Query: 96  LKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSSSASNGEVGNGDSLGKG 155
           L+ L+D FGS FSL +IA+AY +A    D+A EIL  M   T       E+    S    
Sbjct: 17  LQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAEKTPQ-CDQVEMKTATSKPTQ 76

Query: 156 KVSEKSY--QVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPSTNKFTKIYKPVKVEVK 215
               K    Q     K  + K    S GTVS++IGKEYA ++P +N   +  KP+K+  +
Sbjct: 77  VYVPKEVPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINSR 136

Query: 216 LLHES---------SSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIREDYLSEA 275
            + E+         S+EG  +  P+D      +E+F+ KMLG+GF+  +EVI +      
Sbjct: 137 DIPETEIWSEEMRKSNEGKISRAPTD------VEEFIVKMLGEGFQASQEVIHQ------ 196

Query: 276 INIKLGSCGYDMKKSMESLLNRS-TAVDERLGSGNK-----STDMTAASCSRTDLISCQK 335
               LG CGYD+KKS E LL+ S T     +G  N+          + SC++ +L    +
Sbjct: 197 ---VLGVCGYDVKKSTEKLLDFSDTKKYADVGISNEVMSKVDPQRQSTSCNQMELQKISQ 256

Query: 336 NKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRRAVPRR 395
           +     + G                    ++ L+KEVL ALF+ +E   ++         
Sbjct: 257 SVGARTFTGSQEG-------------RNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGE 316

Query: 396 QQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYRGTMKEYY 455
           ++ G  GR V +P +D   E    V+    T  + +D+EN ++  RKAVRE+   MKEYY
Sbjct: 317 RRPGVAGRPVFKPLEDPFQERVVAVKQSSNTSKE-DDDENEFKAHRKAVREHLNQMKEYY 376

Query: 456 AAAIDAFAKGDSVRAAKLIDEKQNYFIEATR 470
            AA +AF+KG++ RA +L+ EK ++F +  R
Sbjct: 377 GAAAEAFSKGETERAHRLV-EKGHFFGQKAR 376

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BLAST of Lsi01G003220 vs. TrEMBL
Match: A0A0A0KNB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517290 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 1.7e-171
Identity = 325/402 (80.85%), Postives = 356/402 (88.56%), Query Frame = 1 

Query: 78  GKETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRST 137
           GKETYG NASKC++ED+VLKSL+DAFGS FSL+EIASAYF+AG+KADLA EILFQMQ ST
Sbjct: 3   GKETYGTNASKCSQEDIVLKSLVDAFGSKFSLEEIASAYFKAGYKADLAGEILFQMQEST 62

Query: 138 SSSASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPS 197
           SSSA + +VGNGD+LGKGKVSEK YQVKGNLK AK KVQ FSTGTVSNIIGKEYACSKPS
Sbjct: 63  SSSALSDDVGNGDNLGKGKVSEKKYQVKGNLKAAKSKVQSFSTGTVSNIIGKEYACSKPS 122

Query: 198 TNKFTKIYKPVKVEVKLLHESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIR 257
            NKFTK+ KPVKVEVK+LHESSSEG CT++PSDF LHH+MEDFLFKMLGDGFRLKREVIR
Sbjct: 123 GNKFTKVNKPVKVEVKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREVIR 182

Query: 258 EDYLSEAINIKLGSCGYDMKKSMESLLNRSTA-VDERLGSGNKSTDMTAASCSRTDLISC 317
           E          +G+CGYDMK+SME+LLNRST  VDERLGSGNKSTDMTAASCSR+D ISC
Sbjct: 183 E---------VIGTCGYDMKESMENLLNRSTTPVDERLGSGNKSTDMTAASCSRSDSISC 242

Query: 318 QKNKADNHYPGG---NGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRR 377
           Q+NKA+NHYPGG   NGN+ASSKKVLELTNLEKTRSDLQKEVLTAL+NASEEPEEESPRR
Sbjct: 243 QRNKAENHYPGGSSWNGNLASSKKVLELTNLEKTRSDLQKEVLTALYNASEEPEEESPRR 302

Query: 378 AVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLD--VEDEENSYQLLRKAVREYR 437
            VPRR+QFGAYG+LVSEPFKD+DAE EK VEY +Q DLD  VEDEENSYQLLRKAVREYR
Sbjct: 303 TVPRRKQFGAYGQLVSEPFKDVDAEREKPVEYNDQIDLDVEVEDEENSYQLLRKAVREYR 362

Query: 438 GTMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKE 474
           GTMKEYYAAAIDAFAKGDSVRAAKLIDE   +  +A    K+
Sbjct: 363 GTMKEYYAAAIDAFAKGDSVRAAKLIDEGHFFHKKAQEADKQ 395

[Close]
BLAST of Lsi01G003220 vs. TrEMBL
Match: W9S9N0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014531 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 166/401 (41.40%), Postives = 238/401 (59.35%), Query Frame = 1 

Query: 85  NASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSSSASN- 144
           + S+  +E+  LK L+DAFGSAF+L EIASAY +AG  ADLA E L++MQ + S+S  + 
Sbjct: 4   SGSEYNDEERALKGLLDAFGSAFTLDEIASAYCKAGRNADLAGEFLYEMQGNASTSTDHP 63

Query: 145 -------GEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKP 204
                   E  +  S     VSE+SY+V GN +    K +P S G+VS+IIGK+Y  +  
Sbjct: 64  VDGETKGSEQSSASSCANDNVSEQSYEVNGNSRPTNPKNRPVSVGSVSSIIGKDYVRTTR 123

Query: 205 STNKFTKIYKPVKVEVKLLH--ESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKRE 264
            TN      KP+K+E K+L   E   E   +N   D  +  DME+FLF+MLGDGFRL+R 
Sbjct: 124 PTNGSCNATKPMKLESKVLPVPELWEEEAKSNSERDDSIRRDMEEFLFRMLGDGFRLERN 183

Query: 265 VIREDYLSEAINIKLGSCGYDMKKSMESLLNRST-AVDERLGSGNKSTDMTAASCSRTDL 324
           VI E          L +CGYDM K+ME LL+ ST A+D++      ST+     CS+ D 
Sbjct: 184 VIEE---------VLDACGYDMPKTMEKLLDLSTTALDKKNNFVGDSTNKITGLCSKNDA 243

Query: 325 ISCQKNKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASE-EPEEESPR 384
            S QK K  N Y GGN + A +  V ELT  +K R DL++E++ +LFNASE E E E P+
Sbjct: 244 PSGQK-KCTN-YCGGNDDAALNSSV-ELTAKQKQRHDLEREIMASLFNASERETEYELPK 303

Query: 385 RAVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYRG 444
           + +   ++ G +G+ V+EP  D     +K  E ++Q     ++ E SY+ +R+AV+EYRG
Sbjct: 304 KRLTVGKRSGVFGKPVTEPLHD-SIVAQKITEVQQQRQNQYDEVEESYKAVRRAVKEYRG 363

Query: 445 TMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKE 474
            +KEYY +A++AF KGD  RA KL+++   +  +A    +E
Sbjct: 364 MVKEYYQSAVEAFVKGDRARAQKLLEQGMFFHQKAREADEE 391

[Close]
BLAST of Lsi01G003220 vs. TrEMBL
Match: M5WHC0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004831mg PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.6e-61
Identity = 168/396 (42.42%), Postives = 231/396 (58.33%), Query Frame = 1 

Query: 80  ETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSS 139
           E  G+N +   +++  LK L++AFG+AFSL +IASAY +AG  A  A E L     +  +
Sbjct: 2   EASGLNGASNFDDEKALKGLLEAFGAAFSLDQIASAYCKAGKNAGDAAEALAMSTPNGEA 61

Query: 140 SASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPSTN 199
                E  +  SLG        YQ  GN + +K K +  S G+VS+IIGK Y    PS +
Sbjct: 62  KPRGEEESSRLSLGNSSKKPYLYQANGNSRASKPKYRAVSGGSVSSIIGKHYGKKTPSAD 121

Query: 200 KFTKIYKPVKVEVKLLHESSS--EGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIR 259
                 KP+K++ ++L  S +  E   +N   +  LH DMEDFLF MLGDGF+L+RE IR
Sbjct: 122 GSCNATKPLKLDSEVLPMSETWVEKAESNPSRNDGLHQDMEDFLFTMLGDGFKLERERIR 181

Query: 260 EDYLSEAINIKLGSCGYDMKKSMESLLN-RSTAVDERLGSGNKSTDMTAASCSRTDLISC 319
           E          L SCG+DM+KSME L+N  ++  D+R G   +S+D    S S T L S 
Sbjct: 182 E---------VLDSCGHDMEKSMEKLINLPASTSDKRNGLVARSSDKLIPSISLTCLYSS 241

Query: 320 QKNKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPE---EESPRR 379
             +         NG+ AS+   ++ T  +K RSDLQKEVL ALF+ASE+ E   EE PRR
Sbjct: 242 SCS---------NGDKASNTNGVDFTGQKKERSDLQKEVLAALFSASEKSEERPEELPRR 301

Query: 380 AVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYRGT 439
            +    ++GAYG+LV EP  D  +EC K V Y++    D  D+E+ YQ+LRKAV+EYR T
Sbjct: 302 TIKAANRYGAYGQLVVEPPNDFISEC-KSVVYQQHPKEDDADDEDDYQVLRKAVKEYRTT 361

Query: 440 MKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATR 470
           MKEY+ AA++AF+K D  RA KL+ E+  +F E  R
Sbjct: 362 MKEYFQAAVEAFSKKDHDRANKLL-EQGKFFQEKAR 377

[Close]
BLAST of Lsi01G003220 vs. TrEMBL
Match: A0A0L9VFF5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g245000 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 165/409 (40.34%), Postives = 237/409 (57.95%), Query Frame = 1 

Query: 80  ETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSS 139
           E  G N  KC EE   LK L+DAFGSAFSL+EIASAY +A   ADLA EILF+MQ S++ 
Sbjct: 2   EVSGQNVVKCDEEKA-LKCLLDAFGSAFSLEEIASAYCKASRNADLAGEILFEMQGSSTG 61

Query: 140 SASNGEVGNGDSLGKG-KVSEKSYQVKGNL---KTAKVKVQPFSTGTVSNIIGKEYACSK 199
           S+S  +  N D   +G   S   Y ++ +    KT++ KV+P S GTVS+IIGK Y    
Sbjct: 62  SSSTLDSSNADVRTEGSSESSDGYSIENSFQERKTSRPKVRPVSAGTVSSIIGKNYVRPA 121

Query: 200 PSTNKFTKIYKPVKVEVKLLHESS--SEGHCTNIPSDFH--LHHDMEDFLFKMLGDGFRL 259
           PS N  ++  KP K++ K L  +    E +  ++ S  H  LH DMEDFLFKMLGDGF+L
Sbjct: 122 PSANGSSRTTKPTKLDAKSLPMTGIWREKNKPDVSSSKHDQLHQDMEDFLFKMLGDGFQL 181

Query: 260 KREVIREDYLSEAINIKLGSCGYDMKKSMESLLNRSTAVDERLGSGNKSTDMTAASCSRT 319
            R +IR+          L +CGYD++KS+  LL++S      + SG +   +  ++   T
Sbjct: 182 DRNMIRQ---------VLDTCGYDIQKSLVKLLDQS-----NMASGKRKAVVGDSAGGFT 241

Query: 320 DL------ISCQKNKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEE 379
           D+       S ++   D +YP G G    S K  EL   +K + DLQKEVL++LFN    
Sbjct: 242 DIKPKSEVPSSERKSQDLNYPRG-GKSIGSTKGTELHQQQKQKHDLQKEVLSSLFNYQGH 301

Query: 380 PE-EESPRRAVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLR 439
            E EE+P+R V        +GR+V EP KD   E +  +++    ++   ++E  Y+ +R
Sbjct: 302 SEVEEAPKRIVKDLNMKSKFGRVVFEPPKDFLEELDVDMDFSPPENIADPEDEEEYKNVR 361

Query: 440 KAVREYRGTMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKE 474
           KAV+EYR  M EYY AA++AFAKGD ++A K++++ Q +  +A    +E
Sbjct: 362 KAVKEYRVAMSEYYKAAVEAFAKGDQIKAEKMLEQGQFFLSKAHEANEE 394

[Close]
BLAST of Lsi01G003220 vs. TrEMBL
Match: A0A0S3S2L4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G040900 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 165/409 (40.34%), Postives = 237/409 (57.95%), Query Frame = 1 

Query: 80  ETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSS 139
           E  G N  KC EE   LK L+DAFGSAFSL+EIASAY +A   ADLA EILF+MQ S++ 
Sbjct: 2   EVSGQNVVKCDEEKA-LKCLLDAFGSAFSLEEIASAYCKASRNADLAGEILFEMQGSSTG 61

Query: 140 SASNGEVGNGDSLGKG-KVSEKSYQVKGNL---KTAKVKVQPFSTGTVSNIIGKEYACSK 199
           S+S  +  N D   +G   S   Y ++ +    KT++ KV+P S GTVS+IIGK Y    
Sbjct: 62  SSSTLDSSNADVRTEGSSESSDGYSIENSFQERKTSRPKVRPVSAGTVSSIIGKNYVRPA 121

Query: 200 PSTNKFTKIYKPVKVEVKLLHESS--SEGHCTNIPSDFH--LHHDMEDFLFKMLGDGFRL 259
           PS N  ++  KP K++ K L  +    E +  ++ S  H  LH DMEDFLFKMLGDGF+L
Sbjct: 122 PSANGSSRTTKPTKLDAKSLPMTGIWREKNKPDVSSSKHDQLHQDMEDFLFKMLGDGFQL 181

Query: 260 KREVIREDYLSEAINIKLGSCGYDMKKSMESLLNRSTAVDERLGSGNKSTDMTAASCSRT 319
            R +IR+          L +CGYD++KS+  LL++S      + SG +   +  ++   T
Sbjct: 182 DRNMIRQ---------VLDTCGYDIQKSLVKLLDQS-----NMASGKRKAVVGDSAGGFT 241

Query: 320 DL------ISCQKNKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEE 379
           D+       S ++   D +YP G G    S K  EL   +K + DLQKEVL++LFN    
Sbjct: 242 DIKPKSEVPSSERKSQDLNYPRG-GKSIGSTKGTELHQQQKQKHDLQKEVLSSLFNYQGH 301

Query: 380 PE-EESPRRAVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLR 439
            E EE+P+R V        +GR+V EP KD   E +  +++    ++   ++E  Y+ +R
Sbjct: 302 SEVEEAPKRIVKDLNMKSKFGRVVFEPPKDFLEELDVDMDFSPPENIADPEDEEEYKNVR 361

Query: 440 KAVREYRGTMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKE 474
           KAV+EYR  M EYY AA++AFAKGD ++A K++++ Q +  +A    +E
Sbjct: 362 KAVKEYRVAMSEYYKAAVEAFAKGDQIKAEKMLEQGQFFLSKAHEANEE 394

[Close]
BLAST of Lsi01G003220 vs. TAIR10
Match: AT3G15390.1 (AT3G15390.1 silencing defective 5)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-34
Identity = 125/391 (31.97%), Postives = 192/391 (49.10%), Query Frame = 1 

Query: 96  LKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSSSASNGEVGNGDSLGKG 155
           L+ L+D FGS FSL +IA+AY +A    D+A EIL  M   T       E+    S    
Sbjct: 17  LQVLLDTFGSRFSLDDIAAAYCQASQNVDVAGEILSAMAEKTPQ-CDQVEMKTATSKPTQ 76

Query: 156 KVSEKSY--QVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPSTNKFTKIYKPVKVEVK 215
               K    Q     K  + K    S GTVS++IGKEYA ++P +N   +  KP+K+  +
Sbjct: 77  VYVPKEVPRQEDSKAKVWRPKRNSISNGTVSSVIGKEYARTRPISNAPKEATKPLKINSR 136

Query: 216 LLHES---------SSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIREDYLSEA 275
            + E+         S+EG  +  P+D      +E+F+ KMLG+GF+  +EVI +      
Sbjct: 137 DIPETEIWSEEMRKSNEGKISRAPTD------VEEFIVKMLGEGFQASQEVIHQ------ 196

Query: 276 INIKLGSCGYDMKKSMESLLNRS-TAVDERLGSGNK-----STDMTAASCSRTDLISCQK 335
               LG CGYD+KKS E LL+ S T     +G  N+          + SC++ +L    +
Sbjct: 197 ---VLGVCGYDVKKSTEKLLDFSDTKKYADVGISNEVMSKVDPQRQSTSCNQMELQKISQ 256

Query: 336 NKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRRAVPRR 395
           +     + G                    ++ L+KEVL ALF+ +E   ++         
Sbjct: 257 SVGARTFTGSQEG-------------RNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGE 316

Query: 396 QQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYRGTMKEYY 455
           ++ G  GR V +P +D   E    V+    T  + +D+EN ++  RKAVRE+   MKEYY
Sbjct: 317 RRPGVAGRPVFKPLEDPFQERVVAVKQSSNTSKE-DDDENEFKAHRKAVREHLNQMKEYY 376

Query: 456 AAAIDAFAKGDSVRAAKLIDEKQNYFIEATR 470
            AA +AF+KG++ RA +L+ EK ++F +  R
Sbjct: 377 GAAAEAFSKGETERAHRLV-EKGHFFGQKAR 376

[Close]
BLAST of Lsi01G003220 vs. NCBI nr
Match: gi|449433849|ref|XP_004134709.1| (PREDICTED: uncharacterized protein LOC101206014 [Cucumis sativus])

HSP 1 Score: 610.5 bits (1573), Expect = 2.5e-171
Identity = 325/402 (80.85%), Postives = 356/402 (88.56%), Query Frame = 1 

Query: 78  GKETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRST 137
           GKETYG NASKC++ED+VLKSL+DAFGS FSL+EIASAYF+AG+KADLA EILFQMQ ST
Sbjct: 3   GKETYGTNASKCSQEDIVLKSLVDAFGSKFSLEEIASAYFKAGYKADLAGEILFQMQEST 62

Query: 138 SSSASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPS 197
           SSSA + +VGNGD+LGKGKVSEK YQVKGNLK AK KVQ FSTGTVSNIIGKEYACSKPS
Sbjct: 63  SSSALSDDVGNGDNLGKGKVSEKKYQVKGNLKAAKSKVQSFSTGTVSNIIGKEYACSKPS 122

Query: 198 TNKFTKIYKPVKVEVKLLHESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIR 257
            NKFTK+ KPVKVEVK+LHESSSEG CT++PSDF LHH+MEDFLFKMLGDGFRLKREVIR
Sbjct: 123 GNKFTKVNKPVKVEVKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREVIR 182

Query: 258 EDYLSEAINIKLGSCGYDMKKSMESLLNRSTA-VDERLGSGNKSTDMTAASCSRTDLISC 317
           E          +G+CGYDMK+SME+LLNRST  VDERLGSGNKSTDMTAASCSR+D ISC
Sbjct: 183 E---------VIGTCGYDMKESMENLLNRSTTPVDERLGSGNKSTDMTAASCSRSDSISC 242

Query: 318 QKNKADNHYPGG---NGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRR 377
           Q+NKA+NHYPGG   NGN+ASSKKVLELTNLEKTRSDLQKEVLTAL+NASEEPEEESPRR
Sbjct: 243 QRNKAENHYPGGSSWNGNLASSKKVLELTNLEKTRSDLQKEVLTALYNASEEPEEESPRR 302

Query: 378 AVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLD--VEDEENSYQLLRKAVREYR 437
            VPRR+QFGAYG+LVSEPFKD+DAE EK VEY +Q DLD  VEDEENSYQLLRKAVREYR
Sbjct: 303 TVPRRKQFGAYGQLVSEPFKDVDAEREKPVEYNDQIDLDVEVEDEENSYQLLRKAVREYR 362

Query: 438 GTMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKE 474
           GTMKEYYAAAIDAFAKGDSVRAAKLIDE   +  +A    K+
Sbjct: 363 GTMKEYYAAAIDAFAKGDSVRAAKLIDEGHFFHKKAQEADKQ 395

[Close]
BLAST of Lsi01G003220 vs. NCBI nr
Match: gi|659078707|ref|XP_008439864.1| (PREDICTED: uncharacterized protein LOC103484526 isoform X1 [Cucumis melo])

HSP 1 Score: 609.4 bits (1570), Expect = 5.5e-171
Identity = 321/388 (82.73%), Postives = 351/388 (90.46%), Query Frame = 1 

Query: 78  GKETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRST 137
           GKETYG+NASKC+EED+VL SL+DAFGS FSL+EIASAYF+AG+KADLA EILFQM+ ST
Sbjct: 3   GKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMREST 62

Query: 138 SSSASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPS 197
           S+SA N +VGNGD+LGKGKVSEK YQVKGNLKTAK+KVQPFSTGTVSNIIGKEYACSKPS
Sbjct: 63  SNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSKPS 122

Query: 198 TNKFTKIYKPVKVEVKLLHESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIR 257
            N FTK+ KPVKVE+K+LHESSSEG CT++PSDF LHH+MEDFLFKMLGDGFRLKREVIR
Sbjct: 123 GNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREVIR 182

Query: 258 EDYLSEAINIKLGSCGYDMKKSMESLLNRSTA-VDERLGSGNKSTDMTAASCSRTDLISC 317
           E          +GSCGYDMKKSME+LLNRST  VDERLGSGNKSTD TAA+CSR+  ISC
Sbjct: 183 E---------VIGSCGYDMKKSMENLLNRSTTPVDERLGSGNKSTDSTAATCSRSGSISC 242

Query: 318 QKNKADNHYPGG---NGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRR 377
           Q+NKA+NHYPGG   NGN+ASSKKVLE+TNLEKTRSDLQKEVLTALFNASEEPEEESPRR
Sbjct: 243 QRNKAENHYPGGSSRNGNLASSKKVLEMTNLEKTRSDLQKEVLTALFNASEEPEEESPRR 302

Query: 378 AVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLD--VEDEENSYQLLRKAVREYR 437
            VPRR+QFGAYG+LVSEPFKD+DAE EK VEY +Q DLD  VEDEENSYQLLRKAVREYR
Sbjct: 303 IVPRRKQFGAYGQLVSEPFKDVDAEREKRVEYNDQIDLDVEVEDEENSYQLLRKAVREYR 362

Query: 438 GTMKEYYAAAIDAFAKGDSVRAAKLIDE 460
           GTMKEYYAAAIDAFAKGDSVRAAKLIDE
Sbjct: 363 GTMKEYYAAAIDAFAKGDSVRAAKLIDE 381

[Close]
BLAST of Lsi01G003220 vs. NCBI nr
Match: gi|659078715|ref|XP_008439868.1| (PREDICTED: uncharacterized protein LOC103484526 isoform X2 [Cucumis melo])

HSP 1 Score: 560.1 bits (1442), Expect = 3.9e-156
Identity = 299/387 (77.26%), Postives = 328/387 (84.75%), Query Frame = 1 

Query: 78  GKETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRST 137
           GKETYG+NASKC+EED+VL SL+DAFGS FSL+EIASAYF+AG+KADLA EILFQM+ ST
Sbjct: 3   GKETYGLNASKCSEEDIVLNSLVDAFGSEFSLEEIASAYFKAGYKADLAGEILFQMREST 62

Query: 138 SSSASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPS 197
           S+SA N +VGNGD+LGKGKVSEK YQVKGNLKTAK+KVQPFSTGTVSNIIGKEYACSKPS
Sbjct: 63  SNSALNDDVGNGDNLGKGKVSEKKYQVKGNLKTAKLKVQPFSTGTVSNIIGKEYACSKPS 122

Query: 198 TNKFTKIYKPVKVEVKLLHESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIR 257
            N FTK+ KPVKVE+K+LHESSSEG CT++PSDF LHH+MEDFLFKMLGDGFRLKREVIR
Sbjct: 123 GNNFTKVNKPVKVEMKVLHESSSEGDCTSLPSDFDLHHEMEDFLFKMLGDGFRLKREVIR 182

Query: 258 EDYLSEAINIKLGSCGYDMKKSMESLLNRSTAVDERLGSGNKSTDMTAASCSRTDLISCQ 317
           E          +GSCGYDMKK                         TAA+CSR+  ISCQ
Sbjct: 183 E---------VIGSCGYDMKK-------------------------TAATCSRSGSISCQ 242

Query: 318 KNKADNHYPGG---NGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPEEESPRRA 377
           +NKA+NHYPGG   NGN+ASSKKVLE+TNLEKTRSDLQKEVLTALFNASEEPEEESPRR 
Sbjct: 243 RNKAENHYPGGSSRNGNLASSKKVLEMTNLEKTRSDLQKEVLTALFNASEEPEEESPRRI 302

Query: 378 VPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLD--VEDEENSYQLLRKAVREYRG 437
           VPRR+QFGAYG+LVSEPFKD+DAE EK VEY +Q DLD  VEDEENSYQLLRKAVREYRG
Sbjct: 303 VPRRKQFGAYGQLVSEPFKDVDAEREKRVEYNDQIDLDVEVEDEENSYQLLRKAVREYRG 355

Query: 438 TMKEYYAAAIDAFAKGDSVRAAKLIDE 460
           TMKEYYAAAIDAFAKGDSVRAAKLIDE
Sbjct: 363 TMKEYYAAAIDAFAKGDSVRAAKLIDE 355

[Close]
BLAST of Lsi01G003220 vs. NCBI nr
Match: gi|645237187|ref|XP_008225090.1| (PREDICTED: uncharacterized protein LOC103324759 [Prunus mume])

HSP 1 Score: 256.1 bits (653), Expect = 1.2e-64
Identity = 168/398 (42.21%), Postives = 238/398 (59.80%), Query Frame = 1 

Query: 80  ETYGVNASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSS 139
           E  G+N +   +++  LK L++AFG+AFSL +IASAY +AG  A  A E L     +  +
Sbjct: 2   EASGLNGASNFDDEKALKGLLEAFGAAFSLDQIASAYCKAGKNAGDAAEALAMSTPNGEA 61

Query: 140 SASNGEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKPSTN 199
                E  +  SL         YQ  GN + +K K +P S G+VS+IIGK Y    PS N
Sbjct: 62  KPRGEEESSRLSLDNSSKKPYQYQANGNSRASKPKYRPVSGGSVSSIIGKHYVKKTPSAN 121

Query: 200 KFTKIYKPVKVEVKLLHESSS--EGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKREVIR 259
                 KP+K++ ++L  S +  E   +N   +  +H DMEDFLF MLGDGF+L+RE IR
Sbjct: 122 GSCNATKPLKLDSEVLPMSETWVEKAESNSSRNDGVHQDMEDFLFTMLGDGFKLERERIR 181

Query: 260 EDYLSEAINIKLGSCGYDMKKSMESLLN-RSTAVDERLGSGNKSTDMTAASCSRTDLISC 319
           E          L SCGYDM+KSME L+N  ++  D+R G   +S+D +A  C ++++ S 
Sbjct: 182 E---------VLDSCGYDMEKSMEKLINLPASTSDKRNGLITRSSDKSAGLCQKSEVASE 241

Query: 320 QK--NKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASEEPE---EESP 379
           +K  N ++     GNG+ AS+   ++ T   K RS+LQKEVL ALF+ASE  E   EE P
Sbjct: 242 RKCINSSE-----GNGDKASNTNGVDFTGQNKERSELQKEVLAALFSASERSEERPEELP 301

Query: 380 RRAVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYR 439
           RR +    ++GAYG+LV EP  D  +EC+  V Y++    D  D+E++YQ+LRKAV+EYR
Sbjct: 302 RRTIKAANRYGAYGQLVVEPPNDFISECKSAVVYQQHPKEDDADDEDNYQVLRKAVKEYR 361

Query: 440 GTMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATR 470
            TMKEY+ AA++AF+K D  RA KL+ E+  +F E  R
Sbjct: 362 TTMKEYFQAAVEAFSKEDHDRANKLL-EQGKFFQEKAR 384

[Close]
BLAST of Lsi01G003220 vs. NCBI nr
Match: gi|703144116|ref|XP_010108205.1| (hypothetical protein L484_014531 [Morus notabilis])

HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 166/401 (41.40%), Postives = 238/401 (59.35%), Query Frame = 1 

Query: 85  NASKCAEEDVVLKSLIDAFGSAFSLQEIASAYFEAGHKADLADEILFQMQRSTSSSASN- 144
           + S+  +E+  LK L+DAFGSAF+L EIASAY +AG  ADLA E L++MQ + S+S  + 
Sbjct: 4   SGSEYNDEERALKGLLDAFGSAFTLDEIASAYCKAGRNADLAGEFLYEMQGNASTSTDHP 63

Query: 145 -------GEVGNGDSLGKGKVSEKSYQVKGNLKTAKVKVQPFSTGTVSNIIGKEYACSKP 204
                   E  +  S     VSE+SY+V GN +    K +P S G+VS+IIGK+Y  +  
Sbjct: 64  VDGETKGSEQSSASSCANDNVSEQSYEVNGNSRPTNPKNRPVSVGSVSSIIGKDYVRTTR 123

Query: 205 STNKFTKIYKPVKVEVKLLH--ESSSEGHCTNIPSDFHLHHDMEDFLFKMLGDGFRLKRE 264
            TN      KP+K+E K+L   E   E   +N   D  +  DME+FLF+MLGDGFRL+R 
Sbjct: 124 PTNGSCNATKPMKLESKVLPVPELWEEEAKSNSERDDSIRRDMEEFLFRMLGDGFRLERN 183

Query: 265 VIREDYLSEAINIKLGSCGYDMKKSMESLLNRST-AVDERLGSGNKSTDMTAASCSRTDL 324
           VI E          L +CGYDM K+ME LL+ ST A+D++      ST+     CS+ D 
Sbjct: 184 VIEE---------VLDACGYDMPKTMEKLLDLSTTALDKKNNFVGDSTNKITGLCSKNDA 243

Query: 325 ISCQKNKADNHYPGGNGNMASSKKVLELTNLEKTRSDLQKEVLTALFNASE-EPEEESPR 384
            S QK K  N Y GGN + A +  V ELT  +K R DL++E++ +LFNASE E E E P+
Sbjct: 244 PSGQK-KCTN-YCGGNDDAALNSSV-ELTAKQKQRHDLEREIMASLFNASERETEYELPK 303

Query: 385 RAVPRRQQFGAYGRLVSEPFKDMDAECEKHVEYKEQTDLDVEDEENSYQLLRKAVREYRG 444
           + +   ++ G +G+ V+EP  D     +K  E ++Q     ++ E SY+ +R+AV+EYRG
Sbjct: 304 KRLTVGKRSGVFGKPVTEPLHD-SIVAQKITEVQQQRQNQYDEVEESYKAVRRAVKEYRG 363

Query: 445 TMKEYYAAAIDAFAKGDSVRAAKLIDEKQNYFIEATRWQKE 474
            +KEYY +A++AF KGD  RA KL+++   +  +A    +E
Sbjct: 364 MVKEYYQSAVEAFVKGDRARAQKLLEQGMFFHQKAREADEE 391

The following BLAST results are available for this feature:
BLAST of Lsi01G003220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDE5_ARATH2.4e-3331.97Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana GN=SDE5 PE=2 SV=... [more]
BLAST of Lsi01G003220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNB3_CUCSA1.7e-17180.85Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517290 PE=4 SV=1[more]
W9S9N0_9ROSA2.3e-6241.40Uncharacterized protein OS=Morus notabilis GN=L484_014531 PE=4 SV=1[more]
M5WHC0_PRUPE5.6e-6142.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004831mg PE=4 SV=1[more]
A0A0L9VFF5_PHAAN1.6e-6040.34Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g245000 PE=4 SV=1[more]
A0A0S3S2L4_PHAAN1.6e-6040.34Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G040900 PE=... [more]
BLAST of Lsi01G003220 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15390.11.4e-3431.97 silencing defective 5[more]
BLAST of Lsi01G003220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433849|ref|XP_004134709.1|2.5e-17180.85PREDICTED: uncharacterized protein LOC101206014 [Cucumis sativus][more]
gi|659078707|ref|XP_008439864.1|5.5e-17182.73PREDICTED: uncharacterized protein LOC103484526 isoform X1 [Cucumis melo][more]
gi|659078715|ref|XP_008439868.1|3.9e-15677.26PREDICTED: uncharacterized protein LOC103484526 isoform X2 [Cucumis melo][more]
gi|645237187|ref|XP_008225090.1|1.2e-6442.21PREDICTED: uncharacterized protein LOC103324759 [Prunus mume][more]
gi|703144116|ref|XP_010108205.1|3.2e-6241.40hypothetical protein L484_014531 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G003220.1Lsi01G003220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13308UNCHARACTERIZEDcoord: 84..467
score: 1.9
NoneNo IPR availablePANTHERPTHR13308:SF17GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13coord: 84..467
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G003220MELO3C007288Melon (DHL92) v3.5.1lsimeB149
Lsi01G003220Cla97C01G022800Watermelon (97103) v2lsiwmbB115
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G003220Bottle gourd (USVL1VR-Ls)lsilsiB048
Lsi01G003220Bottle gourd (USVL1VR-Ls)lsilsiB066
Lsi01G003220Cucumber (Gy14) v1cgylsiB022
Lsi01G003220Cucumber (Gy14) v1cgylsiB183
Lsi01G003220Cucumber (Gy14) v1cgylsiB193
Lsi01G003220Cucumber (Gy14) v1cgylsiB238
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB014
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB199
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB368
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB408
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB477
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB602
Lsi01G003220Cucurbita maxima (Rimu)cmalsiB786
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB003
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB189
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB354
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB394
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB462
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB588
Lsi01G003220Cucurbita moschata (Rifu)cmolsiB774
Lsi01G003220Cucurbita pepo (Zucchini)cpelsiB023
Lsi01G003220Cucurbita pepo (Zucchini)cpelsiB049
Lsi01G003220Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G003220Cucurbita pepo (Zucchini)cpelsiB415
Lsi01G003220Wild cucumber (PI 183967)cpilsiB018
Lsi01G003220Wild cucumber (PI 183967)cpilsiB256
Lsi01G003220Wild cucumber (PI 183967)cpilsiB439
Lsi01G003220Wild cucumber (PI 183967)cpilsiB516
Lsi01G003220Cucumber (Chinese Long) v2culsiB019
Lsi01G003220Cucumber (Chinese Long) v2culsiB257
Lsi01G003220Cucumber (Chinese Long) v2culsiB434
Lsi01G003220Cucumber (Chinese Long) v2culsiB502
Lsi01G003220Melon (DHL92) v3.5.1lsimeB127
Lsi01G003220Melon (DHL92) v3.5.1lsimeB130
Lsi01G003220Watermelon (Charleston Gray)lsiwcgB123
Lsi01G003220Watermelon (Charleston Gray)lsiwcgB127
Lsi01G003220Watermelon (Charleston Gray)lsiwcgB134
Lsi01G003220Watermelon (97103) v1lsiwmB137
Lsi01G003220Watermelon (97103) v1lsiwmB144
Lsi01G003220Watermelon (97103) v1lsiwmB167
Lsi01G003220Cucumber (Gy14) v2cgyblsiB015
Lsi01G003220Cucumber (Gy14) v2cgyblsiB398
Lsi01G003220Melon (DHL92) v3.6.1lsimedB138
Lsi01G003220Melon (DHL92) v3.6.1lsimedB156
Lsi01G003220Silver-seed gourdcarlsiB132
Lsi01G003220Silver-seed gourdcarlsiB585
Lsi01G003220Silver-seed gourdcarlsiB496
Lsi01G003220Silver-seed gourdcarlsiB865
Lsi01G003220Cucumber (Chinese Long) v3cuclsiB020
Lsi01G003220Cucumber (Chinese Long) v3cuclsiB462
Lsi01G003220Watermelon (97103) v2lsiwmbB121
Lsi01G003220Watermelon (97103) v2lsiwmbB131
Lsi01G003220Wax gourdlsiwgoB168
Lsi01G003220Wax gourdlsiwgoB201