MELO3C007236.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTTAATTTAAATAAAGTCAATATGGAAAACAACTCTCAAAGACCATTAGTCATATTTAGCCAAATAAATGTGGAATAGCCAAATTTCTATATTTCTAATTCATTTATATATTTTCCCTCTCACACCTCTCCGATTCATTCAATCATGGGCTCCGACGACGAAGATCATCATCTCCGGAAGTTCGGAACCCGCCACAAGGTTATGGTCTCTGCAATTTTCAGTCTATTCATCGTCGTTATTATCATTCTTTTCCTCCATTTTTACCTCCGATATCTCCAAAGGCGCCGAAGACAATCCAGATTAATCAATCTCGAACAGCAGATTTCACGAGCCGAACGCCAAATTCACACCGCATCGGCTACGGCGACGGCGCCTCCTAAGGCCGGGCTAGACCCTCTCCTTATAGCCAGAGTTCTGCCGGAATCAATCTTCAAGCAAGCTGATCATCGCGGCGAAATCGTAGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTTAGGATTCTCCCAAATTGCAAGCATATATTCCATGTGGAGTGTATCGATATGTGGCTTTTTTCAAATACAACCTGTCCGGTCTGCCGGACGGCGGTGGAGCCAATAGTTATAGCTGCTACAGAGCACGGGGAGGTTCCGACGGCTCCGCCGTTGGTGGAGGAGCAATCGGGGTCTAGGTTAAGTTCGTTTAGAAGGACAATGAGCAGAGAGAGGTCTCAGACGGTTCATGCGACGGCTCCGCCGTTGACGGAGGAGCAACCGAGCTCTCGACTGAGCTCTTTTAGAAGAATGATGAGTAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGCATCGGTTCGGTCCGGAGACTTAGAGAGGCAATGATTTTAAATTTTTCTATCTACTTTTCAAATCTTCAATTGGTTTATAATTTCTCTGCTGTTTGTACATATAAATTTTATCAAGAATCATTAGTGGTTCTGTTTTTTGTTTTTCATTATTTCAATATGGTTTTGGAGATTTAAATAATTATATAACATAGGTTTGATAATTATAAAAATATATCTTCTATATTCTTACC ATTGTTAATTTAAATAAAGTCAATATGGAAAACAACTCTCAAAGACCATTAGTCATATTTAGCCAAATAAATGTGGAATAGCCAAATTTCTATATTTCTAATTCATTTATATATTTTCCCTCTCACACCTCTCCGATTCATTCAATCATGGGCTCCGACGACGAAGATCATCATCTCCGGAAGTTCGGAACCCGCCACAAGGTTATGGTCTCTGCAATTTTCAGTCTATTCATCGTCGTTATTATCATTCTTTTCCTCCATTTTTACCTCCGATATCTCCAAAGGCGCCGAAGACAATCCAGATTAATCAATCTCGAACAGCAGATTTCACGAGCCGAACGCCAAATTCACACCGCATCGGCTACGGCGACGGCGCCTCCTAAGGCCGGGCTAGACCCTCTCCTTATAGCCAGAGTTCTGCCGGAATCAATCTTCAAGCAAGCTGATCATCGCGGCGAAATCGTAGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTTAGGATTCTCCCAAATTGCAAGCATATATTCCATGTGGAGTGTATCGATATGTGGCTTTTTTCAAATACAACCTGTCCGGTCTGCCGGACGGCGGTGGAGCCAATAGTTATAGCTGCTACAGAGCACGGGGAGGTTCCGACGGCTCCGCCGTTGGTGGAGGAGCAATCGGGGTCTAGGTTAAGTTCGTTTAGAAGGACAATGAGCAGAGAGAGGTCTCAGACGGTTCATGCGACGGCTCCGCCGTTGACGGAGGAGCAACCGAGCTCTCGACTGAGCTCTTTTAGAAGAATGATGAGTAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGCATCGGTTCGGTCCGGAGACTTAGAGAGGCAATGATTTTAAATTTTTCTATCTACTTTTCAAATCTTCAATTGGTTTATAATTTCTCTGCTGTTTGTACATATAAATTTTATCAAGAATCATTAGTGGTTCTGTTTTTTGTTTTTCATTATTTCAATATGGTTTTGGAGATTTAAATAATTATATAACATAGGTTTGATAATTATAAAAATATATCTTCTATATTCTTACC ATGGGCTCCGACGACGAAGATCATCATCTCCGGAAGTTCGGAACCCGCCACAAGGTTATGGTCTCTGCAATTTTCAGTCTATTCATCGTCGTTATTATCATTCTTTTCCTCCATTTTTACCTCCGATATCTCCAAAGGCGCCGAAGACAATCCAGATTAATCAATCTCGAACAGCAGATTTCACGAGCCGAACGCCAAATTCACACCGCATCGGCTACGGCGACGGCGCCTCCTAAGGCCGGGCTAGACCCTCTCCTTATAGCCAGAGTTCTGCCGGAATCAATCTTCAAGCAAGCTGATCATCGCGGCGAAATCGTAGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTTAGGATTCTCCCAAATTGCAAGCATATATTCCATGTGGAGTGTATCGATATGTGGCTTTTTTCAAATACAACCTGTCCGGTCTGCCGGACGGCGGTGGAGCCAATAGTTATAGCTGCTACAGAGCACGGGGAGGTTCCGACGGCTCCGCCGTTGGTGGAGGAGCAATCGGGGTCTAGGTTAAGTTCGTTTAGAAGGACAATGAGCAGAGAGAGGTCTCAGACGGTTCATGCGACGGCTCCGCCGTTGACGGAGGAGCAACCGAGCTCTCGACTGAGCTCTTTTAGAAGAATGATGAGTAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGCATCGGTTCGGTCCGGAGACTTAGAGAGGCAATGA MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQISRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFRVHSCGEASVRSGDLERQ
BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_008439780.1 (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis melo]) HSP 1 Score: 357.5 bits (916), Expect = 3.7e-95 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_004134674.1 (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus] >KGN49280.1 hypothetical protein Csa_6G518350 [Cucumis sativus]) HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89 Identity = 235/246 (95.53%), Postives = 240/246 (97.56%), Query Frame = 0
BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_023544672.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76 Identity = 217/246 (88.21%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_022978748.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima]) HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75 Identity = 212/247 (85.83%), Postives = 222/247 (89.88%), Query Frame = 0
BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_023004110.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima]) HSP 1 Score: 260.0 bits (663), Expect = 8.1e-66 Identity = 197/245 (80.41%), Postives = 213/245 (86.94%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TAIR10
Match: AT2G42350.1 (RING/U-box superfamily protein) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22 Identity = 62/134 (46.27%), Postives = 81/134 (60.45%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TAIR10
Match: AT2G42360.1 (RING/U-box superfamily protein) HSP 1 Score: 91.7 bits (226), Expect = 6.9e-19 Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TAIR10
Match: AT3G62690.1 (AtL5) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TAIR10
Match: AT4G15975.1 (RING/U-box superfamily protein) HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q9SLC4|ATL40_ARATH (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.4e-21 Identity = 62/134 (46.27%), Postives = 81/134 (60.45%), Query Frame = 0
BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q9SLC3|ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17 Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 0
BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14 Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 8.4e-14 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A1S3B099|A0A1S3B099_CUCME (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 2.5e-95 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A0A0KHT2|A0A0A0KHT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518350 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89 Identity = 235/246 (95.53%), Postives = 240/246 (97.56%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A2P5XUQ7|A0A2P5XUQ7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13544 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.4e-28 Identity = 91/205 (44.39%), Postives = 117/205 (57.07%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A1U8HJK0|A0A1U8HJK0_GOSHI (E3 ubiquitin-protein ligase ATL41-like OS=Gossypium hirsutum OX=3635 GN=LOC107886690 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.8e-28 Identity = 88/214 (41.12%), Postives = 112/214 (52.34%), Query Frame = 0
BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A2P5QV65|A0A2P5QV65_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24630 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27 Identity = 88/214 (41.12%), Postives = 112/214 (52.34%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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