MELO3C007236.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C007236.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-H2 finger protein
Locationchr08 : 1641205 .. 1642285 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTTAATTTAAATAAAGTCAATATGGAAAACAACTCTCAAAGACCATTAGTCATATTTAGCCAAATAAATGTGGAATAGCCAAATTTCTATATTTCTAATTCATTTATATATTTTCCCTCTCACACCTCTCCGATTCATTCAATCATGGGCTCCGACGACGAAGATCATCATCTCCGGAAGTTCGGAACCCGCCACAAGGTTATGGTCTCTGCAATTTTCAGTCTATTCATCGTCGTTATTATCATTCTTTTCCTCCATTTTTACCTCCGATATCTCCAAAGGCGCCGAAGACAATCCAGATTAATCAATCTCGAACAGCAGATTTCACGAGCCGAACGCCAAATTCACACCGCATCGGCTACGGCGACGGCGCCTCCTAAGGCCGGGCTAGACCCTCTCCTTATAGCCAGAGTTCTGCCGGAATCAATCTTCAAGCAAGCTGATCATCGCGGCGAAATCGTAGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTTAGGATTCTCCCAAATTGCAAGCATATATTCCATGTGGAGTGTATCGATATGTGGCTTTTTTCAAATACAACCTGTCCGGTCTGCCGGACGGCGGTGGAGCCAATAGTTATAGCTGCTACAGAGCACGGGGAGGTTCCGACGGCTCCGCCGTTGGTGGAGGAGCAATCGGGGTCTAGGTTAAGTTCGTTTAGAAGGACAATGAGCAGAGAGAGGTCTCAGACGGTTCATGCGACGGCTCCGCCGTTGACGGAGGAGCAACCGAGCTCTCGACTGAGCTCTTTTAGAAGAATGATGAGTAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGCATCGGTTCGGTCCGGAGACTTAGAGAGGCAATGATTTTAAATTTTTCTATCTACTTTTCAAATCTTCAATTGGTTTATAATTTCTCTGCTGTTTGTACATATAAATTTTATCAAGAATCATTAGTGGTTCTGTTTTTTGTTTTTCATTATTTCAATATGGTTTTGGAGATTTAAATAATTATATAACATAGGTTTGATAATTATAAAAATATATCTTCTATATTCTTACC

mRNA sequence

ATTGTTAATTTAAATAAAGTCAATATGGAAAACAACTCTCAAAGACCATTAGTCATATTTAGCCAAATAAATGTGGAATAGCCAAATTTCTATATTTCTAATTCATTTATATATTTTCCCTCTCACACCTCTCCGATTCATTCAATCATGGGCTCCGACGACGAAGATCATCATCTCCGGAAGTTCGGAACCCGCCACAAGGTTATGGTCTCTGCAATTTTCAGTCTATTCATCGTCGTTATTATCATTCTTTTCCTCCATTTTTACCTCCGATATCTCCAAAGGCGCCGAAGACAATCCAGATTAATCAATCTCGAACAGCAGATTTCACGAGCCGAACGCCAAATTCACACCGCATCGGCTACGGCGACGGCGCCTCCTAAGGCCGGGCTAGACCCTCTCCTTATAGCCAGAGTTCTGCCGGAATCAATCTTCAAGCAAGCTGATCATCGCGGCGAAATCGTAGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTTAGGATTCTCCCAAATTGCAAGCATATATTCCATGTGGAGTGTATCGATATGTGGCTTTTTTCAAATACAACCTGTCCGGTCTGCCGGACGGCGGTGGAGCCAATAGTTATAGCTGCTACAGAGCACGGGGAGGTTCCGACGGCTCCGCCGTTGGTGGAGGAGCAATCGGGGTCTAGGTTAAGTTCGTTTAGAAGGACAATGAGCAGAGAGAGGTCTCAGACGGTTCATGCGACGGCTCCGCCGTTGACGGAGGAGCAACCGAGCTCTCGACTGAGCTCTTTTAGAAGAATGATGAGTAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGCATCGGTTCGGTCCGGAGACTTAGAGAGGCAATGATTTTAAATTTTTCTATCTACTTTTCAAATCTTCAATTGGTTTATAATTTCTCTGCTGTTTGTACATATAAATTTTATCAAGAATCATTAGTGGTTCTGTTTTTTGTTTTTCATTATTTCAATATGGTTTTGGAGATTTAAATAATTATATAACATAGGTTTGATAATTATAAAAATATATCTTCTATATTCTTACC

Coding sequence (CDS)

ATGGGCTCCGACGACGAAGATCATCATCTCCGGAAGTTCGGAACCCGCCACAAGGTTATGGTCTCTGCAATTTTCAGTCTATTCATCGTCGTTATTATCATTCTTTTCCTCCATTTTTACCTCCGATATCTCCAAAGGCGCCGAAGACAATCCAGATTAATCAATCTCGAACAGCAGATTTCACGAGCCGAACGCCAAATTCACACCGCATCGGCTACGGCGACGGCGCCTCCTAAGGCCGGGCTAGACCCTCTCCTTATAGCCAGAGTTCTGCCGGAATCAATCTTCAAGCAAGCTGATCATCGCGGCGAAATCGTAGAGTGCTCGATTTGCTTGAGCAACATCGAAGAGAAAGCCACCGTTAGGATTCTCCCAAATTGCAAGCATATATTCCATGTGGAGTGTATCGATATGTGGCTTTTTTCAAATACAACCTGTCCGGTCTGCCGGACGGCGGTGGAGCCAATAGTTATAGCTGCTACAGAGCACGGGGAGGTTCCGACGGCTCCGCCGTTGGTGGAGGAGCAATCGGGGTCTAGGTTAAGTTCGTTTAGAAGGACAATGAGCAGAGAGAGGTCTCAGACGGTTCATGCGACGGCTCCGCCGTTGACGGAGGAGCAACCGAGCTCTCGACTGAGCTCTTTTAGAAGAATGATGAGTAGAGACAGAGAGAGATCGTTTAGGGTTCACAGTTGTGGAGAAGCATCGGTTCGGTCCGGAGACTTAGAGAGGCAATGA

Protein sequence

MGSDDEDHHLRKFGTRHKVMVSAIFSLFIVVIIILFLHFYLRYLQRRRRQSRLINLEQQISRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSRLSSFRRTMSRERSQTVHATAPPLTEEQPSSRLSSFRRMMSRDRERSFRVHSCGEASVRSGDLERQ
BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_008439780.1 (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis melo])

HSP 1 Score: 357.5 bits (916), Expect = 3.7e-95
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60

Query: 61  SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT 120
           SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT
Sbjct: 61  SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT 120

Query: 121 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR 180
           VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR
Sbjct: 121 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR 180

Query: 181 LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG 240
           LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG
Sbjct: 181 LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG 240

Query: 241 DLERQ 246
           DLERQ
Sbjct: 241 DLERQ 245

BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_004134674.1 (PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus] >KGN49280.1 hypothetical protein Csa_6G518350 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 2.3e-89
Identity = 235/246 (95.53%), Postives = 240/246 (97.56%), Query Frame = 0

Query: 1   MGSDDED-HHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQ 60
           MGSDDED HHLRKFGTRHK+MVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLI+LEQQ
Sbjct: 1   MGSDDEDHHHLRKFGTRHKIMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLISLEQQ 60

Query: 61  ISRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKA 120
           ISRAERQIHTASATA  PPKAGLDP+LIARVLPESIF QADHRGE+VECSICLSNIEEKA
Sbjct: 61  ISRAERQIHTASATAAMPPKAGLDPVLIARVLPESIFMQADHRGEVVECSICLSNIEEKA 120

Query: 121 TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGS 180
           TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEE SGS
Sbjct: 121 TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEHSGS 180

Query: 181 RLSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS 240
           R SSFRRT+SRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS
Sbjct: 181 RFSSFRRTLSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS 240

Query: 241 GDLERQ 246
           GDLERQ
Sbjct: 241 GDLERQ 246

BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_023544672.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 217/246 (88.21%), Postives = 224/246 (91.06%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGSDDEDHHLRKF  RHK+M+SAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLE QI
Sbjct: 1   MGSDDEDHHLRKFQARHKIMISAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEHQI 60

Query: 61  SRAERQIHTASATATAP-PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKA 120
           SRA+RQ HTA   ATAP PKAGLDP+LIA++L ESI KQADH GEIVECSICLSNIEEKA
Sbjct: 61  SRADRQNHTA---ATAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEKA 120

Query: 121 TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGS 180
           TVRILPNCKHIFHVECIDMWLFSNTTCPVCRT VEPIV  ATEHGE PTAPPL EEQSGS
Sbjct: 121 TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTGVEPIV-TATEHGEAPTAPPLEEEQSGS 180

Query: 181 RLSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS 240
           R SSFRRTMSRERSQTV XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RVHSCGE SVR 
Sbjct: 181 RFSSFRRTMSRERSQTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRVHSCGEGSVRP 240

Query: 241 GDLERQ 246
            D+ERQ
Sbjct: 241 ADMERQ 242

BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_022978748.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima])

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 212/247 (85.83%), Postives = 222/247 (89.88%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGSDDEDHHLRKF +RHK+++SAIF  XXXXXXXXXXXXXXXXXXXXXXXXX INLE QI
Sbjct: 12  MGSDDEDHHLRKFQSRHKILISAIFSLXXXXXXXXXXXXXXXXXXXXXXXXXXINLEHQI 71

Query: 61  SRAERQIHT-ASATATAP-PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEK 120
           SRA+RQ HT A+A  TAP PKAGLDP+LIA++L ESI KQADH GEIVECSICLSNIEEK
Sbjct: 72  SRADRQNHTAATAAGTAPAPKAGLDPVLIAKLLQESIHKQADHHGEIVECSICLSNIEEK 131

Query: 121 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSG 180
           ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP  + ATEHGE PTAPPL EEQSG
Sbjct: 132 ATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP-TVTATEHGEAPTAPPLEEEQSG 191

Query: 181 SRLSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVR 240
            R SSFRRTMSRERSQTV XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RVHSCGE SVR
Sbjct: 192 FRFSSFRRTMSRERSQTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRVHSCGEGSVR 251

Query: 241 SGDLERQ 246
             DLERQ
Sbjct: 252 PADLERQ 257

BLAST of MELO3C007236.2 vs. NCBI nr
Match: XP_023004110.1 (E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 8.1e-66
Identity = 197/245 (80.41%), Postives = 213/245 (86.94%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGSD +    RK+G RHK+MVSAIFXXXXXXXXXXXXXXXXXXXXXXXXX  LI+L+QQI
Sbjct: 1   MGSDHDYRTFRKYGARHKIMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXAGLISLDQQI 60

Query: 61  SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT 120
           SR +R+ HTA+      PKAGLDP+ IARVLPESI KQADH GEIVECSICLSNIEEKA+
Sbjct: 61  SRVDRENHTAAPL----PKAGLDPVFIARVLPESIHKQADHHGEIVECSICLSNIEEKAS 120

Query: 121 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR 180
           VRILPNCKH+FHV CIDMWLFSNTTCPVCRTAVEPIV +A E+GEVPTAPPL EEQS S 
Sbjct: 121 VRILPNCKHVFHVGCIDMWLFSNTTCPVCRTAVEPIVPSA-ENGEVPTAPPLAEEQSSSM 180

Query: 181 LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG 240
           +SSFRRT+SR+R     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGE SVRS 
Sbjct: 181 ISSFRRTISRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEGSVRSA 240

Query: 241 DLERQ 246
           DLERQ
Sbjct: 241 DLERQ 240

BLAST of MELO3C007236.2 vs. TAIR10
Match: AT2G42350.1 (RING/U-box superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22
Identity = 62/134 (46.27%), Postives = 81/134 (60.45%), Query Frame = 0

Query: 72  ATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIF 131
           +  + PPK GLD L+IA +    +  + D  G   EC++CLS +EEK   R+LPNCKH+F
Sbjct: 66  SVVSQPPKRGLDSLVIASLPTFVVGIKNDVAG--TECAVCLSLLEEKDNARMLPNCKHVF 125

Query: 132 HVECIDMWLFSNTTCPVCRTAVEPI-VIAATEHGEVPT---APPL----VEEQSG----S 191
           HV C+D WL + +TCPVCRT  EP       E  E P    APPL    V+ ++G    S
Sbjct: 126 HVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGDFAPPLDFAGVDNKTGGSSVS 185

Query: 192 RLSSFRRTMSRERS 194
           RL SFRR ++RERS
Sbjct: 186 RLDSFRRILTRERS 197

BLAST of MELO3C007236.2 vs. TAIR10
Match: AT2G42360.1 (RING/U-box superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 6.9e-19
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 0

Query: 78  PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIFHVECID 137
           PK GL+P +IA +   ++           EC++CLS ++E+   R LPNCKHIFHV+C+D
Sbjct: 78  PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVD 137

Query: 138 MWLFSNTTCPVCRTAVE--PIVIAATEHGEVPTAPPLVEE-------------------- 194
            WL + +TCPV RT VE  P        G V TAP L+ E                    
Sbjct: 138 TWLTTCSTCPVXRTEVEPRPRXXXXXREGPVGTAPQLLVETRLNLTVEAASSSSSDNKTV 197

BLAST of MELO3C007236.2 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 0

Query: 70  ASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKH 129
           ++A  +     GLDP +I + LP   F    H+ + +EC++CLS  EE  T R+LPNC+H
Sbjct: 83  STAATSVVASRGLDPNVI-KSLPVFTFSDETHK-DPIECAVCLSEFEESETGRVLPNCQH 142

Query: 130 IFHVECIDMWLFSNTTCPVCRTAVEPIV----IAATEHGEVPTA----PPLVEEQSGS 180
            FHV+CIDMW  S++TCP+CR+ VE +      AA    EV  A    P LV E S S
Sbjct: 143 TFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSS 198

BLAST of MELO3C007236.2 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 56  LEQQISRAERQIHTA-SATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSN 115
           + ++IS   R +  A   T ++   + LDP ++ ++ P  ++    H   + ECS+CLS 
Sbjct: 61  IRRRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKI-PIFVYSVKTHESPLEECSVCLSE 120

Query: 116 IEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP 156
            EE    R+LP C H+FHV+CID W  S ++CP+CR  V+P
Sbjct: 121 FEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQP 160

BLAST of MELO3C007236.2 vs. TAIR10
Match: AT4G15975.1 (RING/U-box superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 69  TASATATAPPKA---GLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILP 128
           TA++T    P +   GL+P +I + LP   F  A      +ECS+CLS  ++  + R++P
Sbjct: 36  TAASTFFTDPSSTPGGLNPSII-KSLPIFTF-SAVTALFAMECSVCLSEFKDNESGRVMP 95

Query: 129 NCKHIFHVECIDMWLFSNTTCPVCRTAVEP 156
           NCKH FHV+CIDMW  S+++CP+CR+ +EP
Sbjct: 96  NCKHTFHVDCIDMWFHSHSSCPLCRSLIEP 123

BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q9SLC4|ATL40_ARATH (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-21
Identity = 62/134 (46.27%), Postives = 81/134 (60.45%), Query Frame = 0

Query: 72  ATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIF 131
           +  + PPK GLD L+IA +    +  + D  G   EC++CLS +EEK   R+LPNCKH+F
Sbjct: 66  SVVSQPPKRGLDSLVIASLPTFVVGIKNDVAG--TECAVCLSLLEEKDNARMLPNCKHVF 125

Query: 132 HVECIDMWLFSNTTCPVCRTAVEPI-VIAATEHGEVPT---APPL----VEEQSG----S 191
           HV C+D WL + +TCPVCRT  EP       E  E P    APPL    V+ ++G    S
Sbjct: 126 HVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGDFAPPLDFAGVDNKTGGSSVS 185

Query: 192 RLSSFRRTMSRERS 194
           RL SFRR ++RERS
Sbjct: 186 RLDSFRRILTRERS 197

BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q9SLC3|ATL41_ARATH (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = 0

Query: 78  PKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIFHVECID 137
           PK GL+P +IA +   ++           EC++CLS ++E+   R LPNCKHIFHV+C+D
Sbjct: 78  PKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVD 137

Query: 138 MWLFSNTTCPVCRTAVE--PIVIAATEHGEVPTAPPLVEE-------------------- 194
            WL + +TCPV RT VE  P        G V TAP L+ E                    
Sbjct: 138 TWLTTCSTCPVXRTEVEPRPRXXXXXREGPVGTAPQLLVETRLNLTVEAASSSSSDNKTV 197

BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-17
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 0

Query: 70  ASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKH 129
           ++A  +     GLDP +I + LP   F    H+ + +EC++CLS  EE  T R+LPNC+H
Sbjct: 83  STAATSVVASRGLDPNVI-KSLPVFTFSDETHK-DPIECAVCLSEFEESETGRVLPNCQH 142

Query: 130 IFHVECIDMWLFSNTTCPVCRTAVEPIV----IAATEHGEVPTA----PPLVEEQSGS 180
            FHV+CIDMW  S++TCP+CR+ VE +      AA    EV  A    P LV E S S
Sbjct: 143 TFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSS 198

BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14
Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 56  LEQQISRAERQIHTA-SATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSN 115
           + ++IS   R +  A   T ++   + LDP ++ ++ P  ++    H   + ECS+CLS 
Sbjct: 61  IRRRISAHLRSLAAARDPTQSSSSLSPLDPTVLEKI-PIFVYSVKTHESPLEECSVCLSE 120

Query: 116 IEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEP 156
            EE    R+LP C H+FHV+CID W  S ++CP+CR  V+P
Sbjct: 121 FEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQP 160

BLAST of MELO3C007236.2 vs. Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.4e-14
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 80  AGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKATVRILPNCKHIFHVECIDMW 139
           +GLD  LI   LP  ++K+     E  +C++CL    E   +R+LPNC H FH++CID W
Sbjct: 117 SGLDQALI-DALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTW 176

Query: 140 LFSNTTCPVCR 151
           L SN+TCP+CR
Sbjct: 177 LLSNSTCPLCR 186

BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A1S3B099|A0A1S3B099_CUCME (E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.5e-95
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI
Sbjct: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60

Query: 61  SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT 120
           SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT
Sbjct: 61  SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKAT 120

Query: 121 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR 180
           VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR
Sbjct: 121 VRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGSR 180

Query: 181 LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG 240
           LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG
Sbjct: 181 LSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRSG 240

Query: 241 DLERQ 246
           DLERQ
Sbjct: 241 DLERQ 245

BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A0A0KHT2|A0A0A0KHT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518350 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 235/246 (95.53%), Postives = 240/246 (97.56%), Query Frame = 0

Query: 1   MGSDDED-HHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQ 60
           MGSDDED HHLRKFGTRHK+MVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLI+LEQQ
Sbjct: 1   MGSDDEDHHHLRKFGTRHKIMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLISLEQQ 60

Query: 61  ISRAERQIHTASATATAPPKAGLDPLLIARVLPESIFKQADHRGEIVECSICLSNIEEKA 120
           ISRAERQIHTASATA  PPKAGLDP+LIARVLPESIF QADHRGE+VECSICLSNIEEKA
Sbjct: 61  ISRAERQIHTASATAAMPPKAGLDPVLIARVLPESIFMQADHRGEVVECSICLSNIEEKA 120

Query: 121 TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEQSGS 180
           TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEE SGS
Sbjct: 121 TVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAATEHGEVPTAPPLVEEHSGS 180

Query: 181 RLSSFRRTMSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS 240
           R SSFRRT+SRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS
Sbjct: 181 RFSSFRRTLSRERSQTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHSCGEASVRS 240

Query: 241 GDLERQ 246
           GDLERQ
Sbjct: 241 GDLERQ 246

BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A2P5XUQ7|A0A2P5XUQ7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13544 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.4e-28
Identity = 91/205 (44.39%), Postives = 117/205 (57.07%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGS+D+DH+   FG   K+M+SAI                      XXXXXX   L    
Sbjct: 1   MGSEDDDHN-TTFGVSRKIMLSAIGSLLGVVMLIIMLHLYARYLLRXXXXXXRAALYS-- 60

Query: 61  SRAERQIHTASATATAPPKAGLDPLLIARVLPESIFK----QADHRGEIVECSICLSNIE 120
            R ++      ++ T  PK+GLDPL+IA  LP   +K    Q  H  E  ECS+CL  I 
Sbjct: 61  PRTDQITPVDISSITELPKSGLDPLVIAS-LPMFTYKVTTGQVSHDDEESECSVCLGTIT 120

Query: 121 EKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAAT---EHGEVPTAPPLV 180
           E++ VR+LPNCKHIFHV+CID WL S+TTCP+CRT VEP+V +     ++   PTAPPL 
Sbjct: 121 EESMVRLLPNCKHIFHVQCIDTWLGSHTTCPICRTVVEPMVQSENFELDNRVQPTAPPLE 180

Query: 181 EEQ-----SGSRLSSFRRTMSRERS 194
           ++      SGSR  SFRR + RERS
Sbjct: 181 QKDSEPSGSGSRFDSFRRMLGRERS 201

BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A1U8HJK0|A0A1U8HJK0_GOSHI (E3 ubiquitin-protein ligase ATL41-like OS=Gossypium hirsutum OX=3635 GN=LOC107886690 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.8e-28
Identity = 88/214 (41.12%), Postives = 112/214 (52.34%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGS+D+DH+   FG   K+M+SAI                               L +Q 
Sbjct: 1   MGSEDDDHN-TTFGVSRKIMLSAIGSLLGVVTLIVMLHLYARYL-----------LRRQE 60

Query: 61  SRAERQIHTASATATAP---------PKAGLDPLLIARVLPESIFK----QADHRGEIVE 120
            R    +++       P         PK+GLDPL+IA  LP   +K    Q  H  +  E
Sbjct: 61  RRRRAALYSPRTDQITPVDISSIIELPKSGLDPLVIAS-LPMFTYKVTTGQVSHDDDEPE 120

Query: 121 CSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAAT-EHGE- 180
           CS+CL  I E++TVR+LPNCKHIFHV+CID WL S+TTCP+CRT VEPIV +   E G  
Sbjct: 121 CSVCLGTITEESTVRLLPNCKHIFHVQCIDTWLGSHTTCPICRTVVEPIVQSENFESGNR 180

Query: 181 -VPTAPPLVEEQ-----SGSRLSSFRRTMSRERS 194
             PTAPPL ++      SGSR  SFR+   RERS
Sbjct: 181 VQPTAPPLEQKDGEPSGSGSRFDSFRKMFGRERS 201

BLAST of MELO3C007236.2 vs. TrEMBL
Match: tr|A0A2P5QV65|A0A2P5QV65_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24630 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-27
Identity = 88/214 (41.12%), Postives = 112/214 (52.34%), Query Frame = 0

Query: 1   MGSDDEDHHLRKFGTRHKVMVSAIFXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLEQQI 60
           MGS+D+DH+   FG   K+M+SAI                               L +Q 
Sbjct: 1   MGSEDDDHN-TTFGVSRKIMLSAIGSLLGVVTLIVMLHLYARYL-----------LRRQE 60

Query: 61  SRAERQIHTASATATAP---------PKAGLDPLLIARVLPESIFK----QADHRGEIVE 120
            R    +++       P         PK+GLDPL+IA  LP   +K    Q  H  +  E
Sbjct: 61  RRRRAALYSPRTDQITPVDISSIIELPKSGLDPLVIAS-LPMFTYKVTTGQVSHDDDEPE 120

Query: 121 CSICLSNIEEKATVRILPNCKHIFHVECIDMWLFSNTTCPVCRTAVEPIVIAAT-EHGE- 180
           CS+CL  I E++TVR+LPNCKHIFHV+CID WL S+TTCP+CRT VEPIV +   E G  
Sbjct: 121 CSVCLGTITEESTVRLLPNCKHIFHVQCIDTWLGSHTTCPICRTVVEPIVQSENFESGNR 180

Query: 181 -VPTAPPLVEEQ-----SGSRLSSFRRTMSRERS 194
             PTAPPL ++      S SR  SFRR + RERS
Sbjct: 181 VQPTAPPLEQKDGELSGSVSRFDSFRRMLGRERS 201

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008439780.13.7e-95100.00PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis melo][more]
XP_004134674.12.3e-8995.53PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus] >KGN49280.1 ... [more]
XP_023544672.12.3e-7688.21E3 ubiquitin-protein ligase ATL41-like [Cucurbita pepo subsp. pepo][more]
XP_022978748.12.5e-7585.83E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima][more]
XP_023004110.18.1e-6680.41E3 ubiquitin-protein ligase ATL41-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT2G42350.11.4e-2246.27RING/U-box superfamily protein[more]
AT2G42360.16.9e-1938.85RING/U-box superfamily protein[more]
AT3G16720.11.5e-1843.22TOXICOS EN LEVADURA 2[more]
AT3G62690.11.2e-1536.63AtL5[more]
AT4G15975.13.6e-1543.33RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9SLC4|ATL40_ARATH2.4e-2146.27RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1[more]
sp|Q9SLC3|ATL41_ARATH1.3e-1738.85E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ... [more]
sp|Q8L9T5|ATL2_ARATH2.8e-1743.22RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
sp|Q9LZJ6|ATL5_ARATH2.2e-1436.63RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q8GW38|ATL47_ARATH8.4e-1446.48RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3B099|A0A1S3B099_CUCME2.5e-95100.00E3 ubiquitin-protein ligase ATL41-like OS=Cucumis melo OX=3656 GN=LOC103484472 P... [more]
tr|A0A0A0KHT2|A0A0A0KHT2_CUCSA1.6e-8995.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518350 PE=4 SV=1[more]
tr|A0A2P5XUQ7|A0A2P5XUQ7_GOSBA4.4e-2844.39Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA13544 PE=4 SV... [more]
tr|A0A1U8HJK0|A0A1U8HJK0_GOSHI5.8e-2841.12E3 ubiquitin-protein ligase ATL41-like OS=Gossypium hirsutum OX=3635 GN=LOC10788... [more]
tr|A0A2P5QV65|A0A2P5QV65_GOSBA1.7e-2741.12Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD24630 PE=4 SV... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007236.2.1MELO3C007236.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..245
NoneNo IPR availablePANTHERPTHR14155:SF419SUBFAMILY NOT NAMEDcoord: 4..189
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 4..189
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 107..150
e-value: 1.60282E-16
score: 70.0315
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 96..156
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 108..149
e-value: 1.4E-7
score: 41.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 107..150
e-value: 1.5E-13
score: 50.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 108..150
score: 12.843
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 87..157
e-value: 4.0E-21
score: 76.0

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007236.2Silver-seed gourdcarmedB0937
MELO3C007236.2Watermelon (97103) v2medwmbB523
MELO3C007236.2Wax gourdmedwgoB641
MELO3C007236.2Wax gourdmedwgoB671
MELO3C007236.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007236.2Cucurbita maxima (Rimu)cmamedB897
MELO3C007236.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007236.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007236.2Melon (DHL92) v3.6.1medmedB074
MELO3C007236.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007236.2Watermelon (Charleston Gray)medwcgB518
MELO3C007236.2Watermelon (97103) v1medwmB549