MELO3C006958 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006958
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein PAM68, chloroplastic-like protein
Location	chr6 : 7706045 .. 7706919 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACACCATGGATCACCTCATAAAAGCTTTCGGATAAGATTTCCGGCGATACAAACAAACATACACAAATTAGAAACGGAATCAAAACCTAAGTCGCCATGAAATCCTTTGGGTGTTCCTTTCGCCAGGCTCTCCTCCTTCCAAAGCCTCCGCCACGGAATCAAAGAACCGTAATAATCAACGACTCAACAATCACAAAGAATCTCAGCAATTTCACAACAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTGGTTCTCCAGCGACGGCGAAAAACAGAGAAACCGCCGCGAAAAACCTTTCCGGCCAAAATAACAACGAAGACGACGACGACGAAATTCCGGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTTGTCGGGATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTCCAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTACCATTTTTTACTACTTTCCTGACATTTGGAGCTTCGACAATGGGAATTGCTTACGGGACCTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTGTGATGGGATGGGAAGAGGCCCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATGAAGTCAGTCGCTAAGGAAATTTAATCGGCTCTCTGTTTGGTTACGGAGATACCATGACACGGATAAGTAAGTCTCTGCGGATTGTATACCGGTAATTAATGTACCCAAAAATGCATATGTTAGTATATAATTTAATTTGTATGCTCGTAAATTTGGTGATTTTTGCTTTTACGAGTATTTGGGAGTGACATTTTGTAGCATTTGGTAGTTTTTTAAATTACTTTTGAAATTTGTC

mRNA sequence

GAAACACCATGGATCACCTCATAAAAGCTTTCGGATAAGATTTCCGGCGATACAAACAAACATACACAAATTAGAAACGGAATCAAAACCTAAGTCGCCATGAAATCCTTTGGGTGTTCCTTTCGCCAGGCTCTCCTCCTTCCAAAGCCTCCGCCACGGAATCAAAGAACCGTAATAATCAACGACTCAACAATCACAAAGAATCTCAGCAATTTCACAACAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTGGTTCTCCAGCGACGGCGAAAAACAGAGAAACCGCCGCGAAAAACCTTTCCGGCCAAAATAACAACGAAGACGACGACGACGAAATTCCGGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTTGTCGGGATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTCCAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTACCATTTTTTACTACTTTCCTGACATTTGGAGCTTCGACAATGGGAATTGCTTACGGGACCTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTGTGATGGGATGGGAAGAGGCCCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATGAAGTCAGTCGCTAAGGAAATTTAATCGGCTCTCTGTTTGGTTACGGAGATACCATGACACGGATAAGTAAGTCTCTGCGGATTGTATACCGGTAATTAATGTACCCAAAAATGCATATGTTAGTATATAATTTAATTTGTATGCTCGTAAATTTGGTGATTTTTGCTTTTACGAGTATTTGGGAGTGACATTTTGTAGCATTTGGTAGTTTTTTAAATTACTTTTGAAATTTGTC

Coding sequence (CDS)

ATGAAATCCTTTGGGTGTTCCTTTCGCCAGGCTCTCCTCCTTCCAAAGCCTCCGCCACGGAATCAAAGAACCGTAATAATCAACGACTCAACAATCACAAAGAATCTCAGCAATTTCACAACAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAAGGCTTCACTGGTTCTCCAGCGACGGCGAAAAACAGAGAAACCGCCGCGAAAAACCTTTCCGGCCAAAATAACAACGAAGACGACGACGACGAAATTCCGGAAGCCGTATACAGTAGGATTATAACGAGAATCTTGGCATTTGTCGGGATTCCGATGGCGTTCGGTGTGACATTGTTGAAGATTTTCCAAGCGATTAAGGAGCAAAACCTTTGGGATGTGCCTATTTGGGTACCATTTTTTACTACTTTCCTGACATTTGGAGCTTCGACAATGGGAATTGCTTACGGGACCTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTGTGATGGGATGGGAAGAGGCCCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATGAAGTCAGTCGCTAA

Protein sequence

MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPATAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDEVSR*

Homology

[Close]

BLAST of MELO3C006958 vs. Swiss-Prot
Match: Y5278_ARATH (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-30
Identity = 72/180 (40.00%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNL-SNFTTTSRGQVQVNAKGFTGSPA 60
           M++  CS R   LLP       RT +   S   K L  N       ++    KGF  S  
Sbjct: 1   MRALLCSHR---LLPLSSL--SRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGFQSSRT 60

Query: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           + K            + + +DD  IP+ V+ R++ RI+  VG P+  GV +LK+ + +K+
Sbjct: 61  SEKPGRP--------DPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKD 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180
           +N+WDVP+WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Sbjct: 121 RNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167

[Close]

BLAST of MELO3C006958 vs. Swiss-Prot
Match: PAM68_ARATH (Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.1e-18
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1


Query: 52  KGFTGSPA-TAKNRETAAKNLSGQNNN-----------EDDDDEIPEAVYSRIITRILAF 111
           KGF   P  T K+++    N S ++++           E +   IPE V +R+I+R+   
Sbjct: 68  KGFGPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMGFT 127

Query: 112 VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKK 171
           VG+P+  G+     F  +K     DVP WVPF  +F+ FG +  G++YG +S+S DP ++
Sbjct: 128 VGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLRE 187

Query: 172 GSVMGWEEAQKNWVEMWK 178
           GS++GW EA+KNW   W+
Sbjct: 188 GSLLGWNEAKKNWPVFWQ 205

[Close]

BLAST of MELO3C006958 vs. TrEMBL
Match: A0A0A0LLM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G213970 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 8.9e-84
Identity = 162/185 (87.57%), Postives = 165/185 (89.19%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTT-SRGQVQVNAKGFTGSPA 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60

Query: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180

Query: 181 DEVSR 185
           DE  R
Sbjct: 181 DEGRR 180

[Close]

BLAST of MELO3C006958 vs. TrEMBL
Match: A0A061G1S0_THECC (Sterol regulatory element-binding protein cleavage-activating protein, putative OS=Theobroma cacao GN=TCM_015261 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.2e-45
Identity = 92/172 (53.49%), Postives = 121/172 (70.35%), Query Frame = 1


Query: 10  QALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPATAKNRETAAK 69
           Q   LPKP     RT  I   TI K+ +   ++S  ++Q NAKGF  +P  +  ++ A  
Sbjct: 10  QQFYLPKPSLWGPRTPTILP-TIIKSQNQIQSSSTWKLQANAKGFASTPPASVKKKGA-- 69

Query: 70  NLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWV 129
           N    NNN +DD+ +P+ V+ RII RIL  VG+P+A G+ LL +F   KEQNLWDVP+W+
Sbjct: 70  NEDSNNNNNNDDEPVPQVVFDRIIARILVSVGVPLATGLALLHLFGVAKEQNLWDVPLWL 129

Query: 130 PFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDE 182
           PF TTF+TFGAST+GIAYGTLS S DPE++GS+MG EEAQ+NWVEMWKEE++
Sbjct: 130 PFLTTFITFGASTLGIAYGTLSASWDPERRGSIMGLEEAQRNWVEMWKEEND 178

[Close]

BLAST of MELO3C006958 vs. TrEMBL
Match: A0A068UA19_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020082001 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 93/174 (53.45%), Postives = 127/174 (72.99%), Query Frame = 1


Query: 15  PKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPATA---KNRETAA--- 74
           P+    NQR  I++  T+  N + F   S  ++   AKGF  +PA     K+RE AA   
Sbjct: 16  PRTASWNQRNPILHSKTL--NHATFQLKS-WRLHAEAKGFNRAPANMLQQKDRENAAAKS 75

Query: 75  -KNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPI 134
            +  +G+++++DDDD+IPEAV+ RI+ RIL +VG+P+  GV LL++F  +KEQNLWDVPI
Sbjct: 76  YRGKNGEDDDDDDDDKIPEAVWERIMFRILFYVGVPLVTGVALLQVFSIMKEQNLWDVPI 135

Query: 135 WVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDE 182
           W+PF TTFLTFGAS +GIAYGTLSTS D +++GS +G+EEAQKNWVE+WKEE+E
Sbjct: 136 WLPFLTTFLTFGASALGIAYGTLSTSWDAQREGSFLGFEEAQKNWVEIWKEEEE 186

[Close]

BLAST of MELO3C006958 vs. TrEMBL
Match: M5X516_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026735mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-42
Identity = 90/182 (49.45%), Postives = 125/182 (68.68%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLP-KPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPA 60
           MK+   S + +L L  K  P N +++  N +T+     N  T    ++  NAKGF  +PA
Sbjct: 1   MKTLVFSSQPSLYLASKCSPWNPKSLTFNPTTLQNQKHNKRTY---KMHANAKGFGSAPA 60

Query: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           + K + T+  +     N++D D+EIP+AV+ R++ RI+A VG+PMA G   L +F+ IKE
Sbjct: 61  STKEKPTSQNS---NKNDQDGDEEIPQAVFERMLVRIVASVGLPMAMGFAFLNVFEVIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180
           ++LWDVP+W+PF TT LTFG+ST+GIAYG LSTS D EKKGS++G+EEAQ NWVEMW EE
Sbjct: 121 KHLWDVPLWLPFLTTLLTFGSSTLGIAYGALSTSWDAEKKGSILGFEEAQSNWVEMWSEE 176

Query: 181 DE 182
           DE
Sbjct: 181 DE 176

[Close]

BLAST of MELO3C006958 vs. TrEMBL
Match: A0A0D2U4C5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G016400 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.4e-42
Identity = 85/150 (56.67%), Postives = 109/150 (72.67%), Query Frame = 1


Query: 31  TITKNLSNFTTTSRGQVQVNAKGFTGSPATAKNRETAAKNLSGQNNNEDDDDEIPEAVYS 90
           TI K        S  ++Q NAKGF+ +P  A  +E  AK  S  NN +++D+EIP+ V+ 
Sbjct: 30  TIIKTQKQNQPLSTWKLQANAKGFSSTPQ-ATVKENTAKKSSNNNNKKNEDEEIPQVVFE 89

Query: 91  RIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTL 150
           R+I RIL  VG+PMA G+ LL +F   KEQNLWD P+W+PF TT +TFGAST+GIAYGTL
Sbjct: 90  RMIARILVSVGVPMATGLALLHLFGVAKEQNLWDAPLWLPFLTTLITFGASTLGIAYGTL 149

Query: 151 STSLDPEKKGSVMGWEEAQKNWVEMWKEED 181
           S S DP+KKGS++G EEAQ+NWVEMWKEE+
Sbjct: 150 SASWDPKKKGSLLGLEEAQRNWVEMWKEEN 178

[Close]

BLAST of MELO3C006958 vs. TAIR10
Match: AT5G52780.1 (AT5G52780.1 Protein of unknown function (DUF3464))

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31
Identity = 72/180 (40.00%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNL-SNFTTTSRGQVQVNAKGFTGSPA 60
           M++  CS R   LLP       RT +   S   K L  N       ++    KGF  S  
Sbjct: 1   MRALLCSHR---LLPLSSL--SRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGFQSSRT 60

Query: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           + K            + + +DD  IP+ V+ R++ RI+  VG P+  GV +LK+ + +K+
Sbjct: 61  SEKPGRP--------DPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLEVLKD 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180
           +N+WDVP+WVP+ TT +TFG+S +GIAYG+LST+LDP K  S+ G +EA++NWVEMWKE+
Sbjct: 121 RNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEMWKED 167

[Close]

BLAST of MELO3C006958 vs. TAIR10
Match: AT4G19100.1 (AT4G19100.1 Protein of unknown function (DUF3464))

HSP 1 Score: 100.9 bits (250), Expect = 8.6e-22
Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 1


Query: 52  KGFTGSPA-TAKNRETAAKNLSGQNNN---EDDDDE--------IPEAVYSRIITRILAF 111
           KGF   P  T K+++    N S ++++   EDDDDE        IPE V +R+I+R+   
Sbjct: 68  KGFGPPPKKTKKSKKPKPGNQSDEDDDDEDEDDDDEEDERERGVIPEIVTNRMISRMGFT 127

Query: 112 VGIPMAFGVTLLKIFQAIKEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKK 171
           VG+P+  G+     F  +K     DVP WVPF  +F+ FG +  G++YG +S+S DP ++
Sbjct: 128 VGLPLFIGLLFFPFFYYLKVGLKVDVPTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLRE 187

Query: 172 GSVMGWEEAQKNWVEMWK 178
           GS++GW EA+KNW   W+
Sbjct: 188 GSLLGWNEAKKNWPVFWQ 205

[Close]

BLAST of MELO3C006958 vs. NCBI nr
Match: gi|659077646|ref|XP_008439311.1| (PREDICTED: uncharacterized protein PAM68-like [Cucumis melo])

HSP 1 Score: 374.4 bits (960), Expect = 1.1e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60
           MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ 120
           AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ
Sbjct: 61  AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ 120

Query: 121 NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED 180
           NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED
Sbjct: 121 NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED 180

Query: 181 EVSR 185
           EVSR
Sbjct: 181 EVSR 184

[Close]

BLAST of MELO3C006958 vs. NCBI nr
Match: gi|449465705|ref|XP_004150568.1| (PREDICTED: uncharacterized protein PAM68-like [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.3e-83
Identity = 162/185 (87.57%), Postives = 165/185 (89.19%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTT-SRGQVQVNAKGFTGSPA 60
           MKS  CSF QALLL  PPP NQRT+IIN STIT NL+NFT T SRGQVQVNAKGFT SP 
Sbjct: 1   MKSLACSFPQALLLSNPPPWNQRTLIINHSTITNNLTNFTPTLSRGQVQVNAKGFTNSPR 60

Query: 61  TAKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120
           TAKNRET A     QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE
Sbjct: 61  TAKNRETTA-----QNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKE 120

Query: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEE 180
           QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSV+GWEEAQKNWVEMWKEE
Sbjct: 121 QNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVLGWEEAQKNWVEMWKEE 180

Query: 181 DEVSR 185
           DE  R
Sbjct: 181 DEGRR 180

[Close]

BLAST of MELO3C006958 vs. NCBI nr
Match: gi|590673226|ref|XP_007038832.1| (Sterol regulatory element-binding protein cleavage-activating protein, putative [Theobroma cacao])

HSP 1 Score: 188.7 bits (478), Expect = 8.9e-45
Identity = 92/172 (53.49%), Postives = 121/172 (70.35%), Query Frame = 1


Query: 10  QALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPATAKNRETAAK 69
           Q   LPKP     RT  I   TI K+ +   ++S  ++Q NAKGF  +P  +  ++ A  
Sbjct: 10  QQFYLPKPSLWGPRTPTILP-TIIKSQNQIQSSSTWKLQANAKGFASTPPASVKKKGA-- 69

Query: 70  NLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQNLWDVPIWV 129
           N    NNN +DD+ +P+ V+ RII RIL  VG+P+A G+ LL +F   KEQNLWDVP+W+
Sbjct: 70  NEDSNNNNNNDDEPVPQVVFDRIIARILVSVGVPLATGLALLHLFGVAKEQNLWDVPLWL 129

Query: 130 PFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEEDE 182
           PF TTF+TFGAST+GIAYGTLS S DPE++GS+MG EEAQ+NWVEMWKEE++
Sbjct: 130 PFLTTFITFGASTLGIAYGTLSASWDPERRGSIMGLEEAQRNWVEMWKEEND 178

[Close]

BLAST of MELO3C006958 vs. NCBI nr
Match: gi|694405430|ref|XP_009377566.1| (PREDICTED: uncharacterized protein PAM68-like [Pyrus x bretschneideri])

HSP 1 Score: 185.7 bits (470), Expect = 7.6e-44
Identity = 92/181 (50.83%), Postives = 126/181 (69.61%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60
           MK+   S + +L LP   P   +T+  + +T+ +NL +   ++  +   NAKGF GS   
Sbjct: 1   MKTLIFSSQPSLYLPSSLPWKPKTLTFHPTTL-QNLGHLKRSTY-KTHANAKGF-GSAPP 60

Query: 61  AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ 120
           A  +ET     SG+N+N D D+E+P+ V+ R++ RI+A VG+P+A G   LK+F A+KE+
Sbjct: 61  ATTKETPTSKNSGKNDNNDSDEEVPQVVFERMLVRIIAAVGLPLATGFAFLKVFDAVKEK 120

Query: 121 NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED 180
           +LWDVP+W+PF TT LTFGAS +GIAYG LSTS D EKKGSV+G EEAQ NWVEMW+EED
Sbjct: 121 HLWDVPLWLPFLTTLLTFGASALGIAYGALSTSWDAEKKGSVLGLEEAQSNWVEMWREED 178

Query: 181 E 182
           E
Sbjct: 181 E 178

[Close]

BLAST of MELO3C006958 vs. NCBI nr
Match: gi|694400924|ref|XP_009375538.1| (PREDICTED: uncharacterized protein PAM68-like [Pyrus x bretschneideri])

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43
Identity = 93/181 (51.38%), Postives = 125/181 (69.06%), Query Frame = 1


Query: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60
           MK+   S + +L LP   P   +T+  + +T+ +NL +    S  +   NAKGF GS   
Sbjct: 1   MKTLIFSSQPSLYLPSSLPWKPKTLTFHPTTL-QNLGHLKR-SMYKTHANAKGF-GSAPP 60

Query: 61  AKNRETAAKNLSGQNNNEDDDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAIKEQ 120
           A  +ET     SG+N+N D D+E+P+ V+ R++ RI+A VG+P+A G   LK+F A+KE+
Sbjct: 61  ATRKETPTSKNSGKNDNNDRDEEVPQVVFERMLVRIIAAVGLPLAAGFAFLKVFDAVKEK 120

Query: 121 NLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWKEED 180
           +LWDVP+W+PF TT LTFGAS +GIAYG LSTS D EKKGSV+G EEAQ NWVEMW+EED
Sbjct: 121 HLWDVPLWLPFLTTLLTFGASALGIAYGALSTSWDAEKKGSVLGLEEAQSNWVEMWREED 178

Query: 181 E 182
           E
Sbjct: 181 E 178

The following BLAST results are available for this feature:

BLAST of MELO3C006958 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5278_ARATH	3.6e-30	40.00	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana GN=At5g52780 PE=2 SV=...	[more]
PAM68_ARATH	7.1e-18	35.51	Protein PAM68, chloroplastic OS=Arabidopsis thaliana GN=PAM68 PE=1 SV=1	[more]

BLAST of MELO3C006958 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLM4_CUCSA	8.9e-84	87.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G213970 PE=4 SV=1	[more]
A0A061G1S0_THECC	6.2e-45	53.49	Sterol regulatory element-binding protein cleavage-activating protein, putative ...	[more]
A0A068UA19_COFCA	2.0e-43	53.45	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020082001 PE=4 SV=1	[more]
M5X516_PRUPE	1.7e-42	49.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026735mg PE=4 SV=1	[more]
A0A0D2U4C5_GOSRA	6.4e-42	56.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G016400 PE=4 SV=1	[more]

BLAST of MELO3C006958 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52780.1	2.1e-31	40.00	Protein of unknown function (DUF3464)	[more]
AT4G19100.1	8.6e-22	39.13	Protein of unknown function (DUF3464)	[more]

BLAST of MELO3C006958 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077646\|ref\|XP_008439311.1\|	1.1e-100	100.00	PREDICTED: uncharacterized protein PAM68-like [Cucumis melo]	[more]
gi\|449465705\|ref\|XP_004150568.1\|	1.3e-83	87.57	PREDICTED: uncharacterized protein PAM68-like [Cucumis sativus]	[more]
gi\|590673226\|ref\|XP_007038832.1\|	8.9e-45	53.49	Sterol regulatory element-binding protein cleavage-activating protein, putative ...	[more]
gi\|694405430\|ref\|XP_009377566.1\|	7.6e-44	50.83	PREDICTED: uncharacterized protein PAM68-like [Pyrus x bretschneideri]	[more]
gi\|694400924\|ref\|XP_009375538.1\|	1.3e-43	51.38	PREDICTED: uncharacterized protein PAM68-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021855	PAM68-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU47080	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006958T1	MELO3C006958T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU47080	MU47080	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	Protein of unknown function DUF3464	PFAM	PF11947	DUF3464	coord: 58..178 score: 4.4
None	No IPR available	PANTHER	PTHR34575	FAMILY NOT NAMED	coord: 64..181 score: 1.4
None	No IPR available	PANTHER	PTHR34575:SF1	SUBFAMILY NOT NAMED	coord: 64..181 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006958	Cla006144	Watermelon (97103) v1	mewmB468
MELO3C006958	ClCG05G008430	Watermelon (Charleston Gray)	mewcgB432
MELO3C006958	Cla97C05G090540	Watermelon (97103) v2	mewmbB440
MELO3C006958	CmaCh18G012720	Cucurbita maxima (Rimu)	cmameB379
MELO3C006958	CmoCh18G013030	Cucurbita moschata (Rifu)	cmomeB372
MELO3C006958	Lsi05G011890	Bottle gourd (USVL1VR-Ls)	lsimeB373
MELO3C006958	Cp4.1LG09g00490	Cucurbita pepo (Zucchini)	cpemeB041
MELO3C006958	Carg22133	Silver-seed gourd	carmeB0734

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006958	Wax gourd	mewgoB530
MELO3C006958	Melon (DHL92) v3.5.1	memeB016
MELO3C006958	Melon (DHL92) v3.5.1	memeB150
MELO3C006958	Cucumber (Gy14) v1	cgymeB368
MELO3C006958	Cucumber (Gy14) v1	cgymeB438
MELO3C006958	Cucumber (Gy14) v1	cgymeB497
MELO3C006958	Cucurbita maxima (Rimu)	cmameB296
MELO3C006958	Cucurbita maxima (Rimu)	cmameB375
MELO3C006958	Cucurbita maxima (Rimu)	cmameB579
MELO3C006958	Cucurbita moschata (Rifu)	cmomeB289
MELO3C006958	Cucurbita moschata (Rifu)	cmomeB368
MELO3C006958	Cucurbita moschata (Rifu)	cmomeB567
MELO3C006958	Wild cucumber (PI 183967)	cpimeB249
MELO3C006958	Wild cucumber (PI 183967)	cpimeB404
MELO3C006958	Cucumber (Chinese Long) v2	cumeB254
MELO3C006958	Cucumber (Chinese Long) v2	cumeB406
MELO3C006958	Watermelon (Charleston Gray)	mewcgB423
MELO3C006958	Watermelon (Charleston Gray)	mewcgB427
MELO3C006958	Watermelon (Charleston Gray)	mewcgB433
MELO3C006958	Watermelon (97103) v1	mewmB461
MELO3C006958	Watermelon (97103) v1	mewmB470
MELO3C006958	Watermelon (97103) v1	mewmB482
MELO3C006958	Cucurbita pepo (Zucchini)	cpemeB043
MELO3C006958	Cucurbita pepo (Zucchini)	cpemeB190
MELO3C006958	Cucurbita pepo (Zucchini)	cpemeB701
MELO3C006958	Bottle gourd (USVL1VR-Ls)	lsimeB035
MELO3C006958	Bottle gourd (USVL1VR-Ls)	lsimeB375
MELO3C006958	Bottle gourd (USVL1VR-Ls)	lsimeB379
MELO3C006958	Cucumber (Gy14) v2	cgybmeB218
MELO3C006958	Cucumber (Gy14) v2	cgybmeB353
MELO3C006958	Cucumber (Gy14) v2	cgybmeB354
MELO3C006958	Silver-seed gourd	carmeB0498
MELO3C006958	Silver-seed gourd	carmeB0966
MELO3C006958	Cucumber (Chinese Long) v3	cucmeB256
MELO3C006958	Cucumber (Chinese Long) v3	cucmeB415
MELO3C006958	Cucumber (Chinese Long) v3	cucmeB416
MELO3C006958	Watermelon (97103) v2	mewmbB425
MELO3C006958	Watermelon (97103) v2	mewmbB434
MELO3C006958	Watermelon (97103) v2	mewmbB437