MELO3C006900 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006900
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA mismatch repair protein MutS
Location	chr6 : 7080568 .. 7082673 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGGTTTTGGAAGGTACATTACAAGGCAATTTTGTCCCAAACGACACAAATTTGGATGCAAATGGAGAGCATTGTCAAATTGTAACAGGACCGAACATGGGTGGAAAAAGTTGCTACATTCGACAAGTTGCTCTCATTGCTCTAATGTCTCAGGTAAACCAAACCCCTATTTGTAACTGTGTCGCGCACACATATTTATAATAAACAAAATTATTTAAACAAAAAAAGGGGGAACAAAAAACTGCTCACAATGGTAACAATATGCTTGGTATGTGAATGATCTGTTGTGTTCTTGATTTTCACTTCCACCTTCCCGTCTTCATCATCTTTTCAAGTTTCAATACATTAGATTATTCTCTTATTAGGTATGCTTTCTTTTCTTTTCTATTCCTCGAACTTTCAAGTTTACCACATACTTTTTCTCATCCATGTAGGTTGGTTCCTTTGTACCGGCATTCTCTGCGAAACTTCATGTCTTAGACGGTATATACACTCGAATGGGTGCTTCTGACAGTATTCAACAAGGTAGAAGCACCTTCTTAGAAGAAATGACTGAGACTTCACATATACTCCGTCATTCCTCATCGCGTTCCTTGGTCATAATTGATGAACTTGGGCGAGGTACAAGCACCCACGATGGTGTGGCCATTGCATATGCAGCTCTGCATAATCTACTCCAGCAGAAGAAATGTTTGGTTCTCTTTGTCACCCACTATCCCAAAGTTGCTGAGATTGCGAAGGAATTCCCAGCATGTGCGAGGGCATACCATGTTTCATATCTTACATCACACAAAAATCCAAGCTTGTCAGGCCAAAAATCAACTGAGGACGTGACTTACTTATACAAGCTTGTTCCTGGTGTTGCGGAGAGTAGTTTTGGTTTCAAAGTTGCACAACTTGCACAGGTGACTTCATTTATCCTACTGGACTGCCCTCTGTTTGAAATTTTATGGAGCATCCTCCCTTGCAAAGCCTGTGTGAATGTTGTTTACTTGTTGTGACCCTAGTTCTTTTTGCCTTTGTTATGTTTTTAGATACCTTTATCGTGTATTGCACGGGCCACAGAAATGGGGATCTGGTTGGAAGAAATAGTAGCAAGAAGAGCACAGCACAAATCCAGAGAACACTTGCCAGAAATATCGGTTAAGGGGTTGGAATGGCAAAGCTTCCAGTCCTTCCTCGAGAGAATTGATGGTTATGAGGAATTCTTTCTTTTCTTGAAAGCTACAGTACGTTCTGCTGATGTCATGGGGACATGGTGCCATCAAATTTACCAAGCTAGACGCATGGCCATGGACTTGTTAGGAAGGTAAAACACAAAATTTTGACCTCAATTACTCGCTATTGTACTGCTGTCATGTTTTACTCATTTCTTTTATTTTTATGTATGAAATGACAGGTGATAGAACTCATTCATCTTGGAGTGGATAATCAATTGAGTTTTTGTGGGCGAGTAGTGAGGAGACCCCTTGCATAGTGTACAAAGGGCATTAGTTCAGTCTGATTTTCAAATATATATTATTAGTGGCTTTCTTTCTTTCTTTTGTTTTGTGGAATGGCCTTTGCGGACAGAAATCCATCTTGTCGAGGAATAGGGTGAATTGGACTCGTTAATGAAGACAAGATTCCAAACTCTATTCCTTCTGTCAGCAATGATCTCATTGCAATAGATATGCAACTTCTATTGCCACATACATTGGTACATTACTGTCCTTCCAGAGGAAGTCATTTACCCTTTAATGAAGCTATGAAAGATCTTAACTCCCTTGCCTTTCTCTCATGTTCTGGTGACTGATCAATTTCTGTATCACTCAAATCAATTACATCAATCTTTTGGCTAGTTTTCTGTTGAAATTTCGAAACTCTATGGGTGTGAATTGCAGGTGAAGGGCTTAAGAGATCGATGACCTCAATCCTCTTTGTGCTACAGCTACGAGCATGGTCAACAATGATTGGTTCAATGTTGAGAAAAACCTCTTGGTTCAGTTCATGAACACCAGTACCAGAAGTCTTTGAATCTATGGGAAGATGGGAGATATTATGAACTGCCCTGCTTTCAGATTCAATTTCGAGCAACAAAGTTTGAAGTCTTTTATCAAT

mRNA sequence

ATGAGGCAGGTTTTGGAAGGTACATTACAAGGCAATTTTGTCCCAAACGACACAAATTTGGATGCAAATGGAGAGCATTGTCAAATTGTAACAGGACCGAACATGGGTGGAAAAAGTTGCTACATTCGACAAGTTGCTCTCATTGCTCTAATGTCTCAGGTTGGTTCCTTTGTACCGGCATTCTCTGCGAAACTTCATGTCTTAGACGGTATATACACTCGAATGGGTGCTTCTGACAGTATTCAACAAGGTAGAAGCACCTTCTTAGAAGAAATGACTGAGACTTCACATATACTCCGTCATTCCTCATCGCGTTCCTTGGTCATAATTGATGAACTTGGGCGAGGTACAAGCACCCACGATGGTGTGGCCATTGCATATGCAGCTCTGCATAATCTACTCCAGCAGAAGAAATGTTTGGTTCTCTTTGTCACCCACTATCCCAAAGTTGCTGAGATTGCGAAGGAATTCCCAGCATGTGCGAGGGCATACCATGTTTCATATCTTACATCACACAAAAATCCAAGCTTGTCAGGCCAAAAATCAACTGAGGACGTGACTTACTTATACAAGCTTGTTCCTGGTGTTGCGGAGAGTAGTTTTGGTTTCAAAGTTGCACAACTTGCACAGATACCTTTATCGTGTATTGCACGGGCCACAGAAATGGGGATCTGGTTGGAAGAAATAGTAGCAAGAAGAGCACAGCACAAATCCAGAGAACACTTGCCAGAAATATCGGTTAAGGGGTTGGAATGGCAAAGCTTCCAGTCCTTCCTCGAGAGAATTGATGGTTATGAGGAATTCTTTCTTTTCTTGAAAGCTACAGTACGTTCTGCTGATGTCATGGGGACATGGTGCCATCAAATTTACCAAGCTAGACGCATGGCCATGGACTTGTTAGGAAGGTGATAGAACTCATTCATCTTGGAGTGGATAATCAATTGAGTTTTTGTGGGCGAGTAGTGAGGAGACCCCTTGCATAGTGTACAAAGGGCATTAGTTCAGTCTGATTTTCAAATATATATTATTAGTGGCTTTCTTTCTTTCTTTTGTTTTGTGGAATGGCCTTTGCGGACAGAAATCCATCTTGTCGAGGAATAGGGTGAATTGGACTCGTTAATGAAGACAAGATTCCAAACTCTATTCCTTCTGTCAGCAATGATCTCATTGCAATAGATATGCAACTTCTATTGCCACATACATTGGTACATTACTGTCCTTCCAGAGGAAGTCATTTACCCTTTAATGAAGCTATGAAAGATCTTAACTCCCTTGCCTTTCTCTCATGTTCTGGTGACTGATCAATTTCTGTATCACTCAAATCAATTACATCAATCTTTTGGCTAGTTTTCTGTTGAAATTTCGAAACTCTATGGGTGTGAATTGCAGGTGAAGGGCTTAAGAGATCGATGACCTCAATCCTCTTTGTGCTACAGCTACGAGCATGGTCAACAATGATTGGTTCAATGTTGAGAAAAACCTCTTGGTTCAGTTCATGAACACCAGTACCAGAAGTCTTTGAATCTATGGGAAGATGGGAGATATTATGAACTGCCCTGCTTTCAGATTCAATTTCGAGCAACAAAGTTTGAAGTCTTTTATCAAT

Coding sequence (CDS)

ATGAGGCAGGTTTTGGAAGGTACATTACAAGGCAATTTTGTCCCAAACGACACAAATTTGGATGCAAATGGAGAGCATTGTCAAATTGTAACAGGACCGAACATGGGTGGAAAAAGTTGCTACATTCGACAAGTTGCTCTCATTGCTCTAATGTCTCAGGTTGGTTCCTTTGTACCGGCATTCTCTGCGAAACTTCATGTCTTAGACGGTATATACACTCGAATGGGTGCTTCTGACAGTATTCAACAAGGTAGAAGCACCTTCTTAGAAGAAATGACTGAGACTTCACATATACTCCGTCATTCCTCATCGCGTTCCTTGGTCATAATTGATGAACTTGGGCGAGGTACAAGCACCCACGATGGTGTGGCCATTGCATATGCAGCTCTGCATAATCTACTCCAGCAGAAGAAATGTTTGGTTCTCTTTGTCACCCACTATCCCAAAGTTGCTGAGATTGCGAAGGAATTCCCAGCATGTGCGAGGGCATACCATGTTTCATATCTTACATCACACAAAAATCCAAGCTTGTCAGGCCAAAAATCAACTGAGGACGTGACTTACTTATACAAGCTTGTTCCTGGTGTTGCGGAGAGTAGTTTTGGTTTCAAAGTTGCACAACTTGCACAGATACCTTTATCGTGTATTGCACGGGCCACAGAAATGGGGATCTGGTTGGAAGAAATAGTAGCAAGAAGAGCACAGCACAAATCCAGAGAACACTTGCCAGAAATATCGGTTAAGGGGTTGGAATGGCAAAGCTTCCAGTCCTTCCTCGAGAGAATTGATGGTTATGAGGAATTCTTTCTTTTCTTGAAAGCTACAGTACGTTCTGCTGATGTCATGGGGACATGGTGCCATCAAATTTACCAAGCTAGACGCATGGCCATGGACTTGTTAGGAAGGTGA

Protein sequence

MRQVLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKSTEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSREHLPEISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLGR*

Homology

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BLAST of MELO3C006900 vs. Swiss-Prot
Match: MSH3_ARATH (DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.7e-85
Identity = 173/278 (62.23%), Postives = 196/278 (70.50%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE  LQ NFVPNDT L A GE+CQI+TGPNMGGKSCYIRQVALI++M+QVGSFVPA  A
Sbjct: 789  VLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFA 848

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDG++TRMGASDSIQ GRSTFLEE++E SHI+R  SSRSLVI+DELGRGTSTHDGV
Sbjct: 849  KLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGV 908

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 183
            AIAYA L +LL +K+CLVLFVTHYP++AEI+  FP     YHVSYLT  K+    G    
Sbjct: 909  AIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD---KGSYDH 968

Query: 184  EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLE-EIVARRAQHKSREHL 243
            +DVTYLYKLV G+   SFGFKVAQLAQIP SCI RA  M   LE E+ AR    +  E  
Sbjct: 969  DDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARERNTRMGEPE 1028

Query: 244  PEISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSAD 281
                 +G E        E I    + F  LK  +   D
Sbjct: 1029 GHEEPRGAE--------ESISALGDLFADLKFALSEED 1055

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BLAST of MELO3C006900 vs. Swiss-Prot
Match: MSH3_HUMAN (DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4)

HSP 1 Score: 222.2 bits (565), Expect = 7.5e-57
Identity = 108/224 (48.21%), Postives = 155/224 (69.20%), Query Frame = 1


Query: 10   QGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLD 69
            Q  +VPN+T+L  + E   I+TGPNMGGKS YI+QVALI +M+Q+GS+VPA  A + ++D
Sbjct: 874  QDQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVD 933

Query: 70   GIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAA 129
            GI+TRMGA+D+I +G+STF+EE+T+T+ I+R ++S+SLVI+DELGRGTSTHDG+AIAYA 
Sbjct: 934  GIFTRMGAADNIYKGQSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYAT 993

Query: 130  LHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSL---SGQKSTEDV 189
            L   ++  K L LFVTHYP V E+ K +      YH+ +L S     L   + ++  + V
Sbjct: 994  LEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKLDPGAAEQVPDFV 1053

Query: 190  TYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIV 231
            T+LY++  G+A  S+G  VA+LA +P   + +A      LE ++
Sbjct: 1054 TFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLI 1097

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BLAST of MELO3C006900 vs. Swiss-Prot
Match: MSH3_MOUSE (DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3)

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-56
Identity = 110/227 (48.46%), Postives = 156/227 (68.72%), Query Frame = 1


Query: 10   QGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLD 69
            Q  FVPN T+L ++ E   I+TGPNMGGKS YI+QV L+ +M+Q+GS+VPA  A + ++D
Sbjct: 829  QDQFVPNSTSL-SDSERVMIITGPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGIVD 888

Query: 70   GIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAA 129
            GI+TRMGA+D+I +GRSTF+E++T+T+ I+R +S +SLVI+DELGRGTSTHDG+AIAYA 
Sbjct: 889  GIFTRMGAADNIYKGRSTFMEQLTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYAT 948

Query: 130  LHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSH---KNPSLSGQKSTEDV 189
            L   ++  K L LFVTHYP V E+ K +P     YH+ +L +    K  S   ++  + V
Sbjct: 949  LEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPDSV 1008

Query: 190  TYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARR 234
            T+LY++  G+A  S+G  VA+LA +P   + +A      LE +V+ R
Sbjct: 1009 TFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVSLR 1054

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BLAST of MELO3C006900 vs. Swiss-Prot
Match: MSH3_DICDI (DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum GN=msh3 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.5e-54
Identity = 114/232 (49.14%), Postives = 154/232 (66.38%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            +L G+  G++VPN   L  +     I+TGPNMGGKS  +RQ ALI +M+QVG FVPA S 
Sbjct: 1152 ILSGS-DGSYVPNTIELRESACKSMIITGPNMGGKSSLLRQTALIVIMAQVGCFVPATSC 1211

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
             L V D IYTRMGA DSI  G+STF  E+ ETS IL++S+  +LVI+DELGRGTST+DGV
Sbjct: 1212 SLSVFDAIYTRMGARDSIGTGKSTFFIELEETSDILKNSTQNTLVILDELGRGTSTNDGV 1271

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 183
            AIAY+ L  +++  KC  LFVTHYP +A++  ++P     +H+ YL   ++  L  QKS 
Sbjct: 1272 AIAYSTLKYIVEVMKCYCLFVTHYPLLAQLELQYPTQVGNFHMGYLEEKQDQQL--QKSV 1331

Query: 184  -EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRA 235
               V +LYKLV G A++S+G  +A+LA +P+  IA A +    ++E + RRA
Sbjct: 1332 IPKVIFLYKLVKGAAQNSYGLNIARLAGLPMEVIADALKKSNEMKESITRRA 1380

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BLAST of MELO3C006900 vs. Swiss-Prot
Match: MSH3_EMENI (DNA mismatch repair protein msh3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=msh3 PE=3 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-53
Identity = 111/231 (48.05%), Postives = 155/231 (67.10%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            ++E  L  ++VPND NLD++     +VTGPNMGGKS Y+RQVALIA+M Q+GS+VPA +A
Sbjct: 849  MVEQLLLDSYVPNDINLDSSKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQAA 908

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KL +LD ++TRMGA D++  G STF+ E++ET+ IL+ ++ RSLVI+DELGRGTSTHDGV
Sbjct: 909  KLGMLDAVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGV 968

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFP-ACARAYHVSYLTSHKNPSLSGQKS 183
            AIA A L  +++  + L LF+THY  ++ +   FP    R  H+ +       S SG  +
Sbjct: 969  AIAQAVLDYMVRSIRSLTLFITHYQHLSAMVHSFPDGELRNVHMRF-------SESGTGA 1028

Query: 184  TEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARR 234
             ED+T+LY++  GVA  S+G  VA+LA +P   +  A +    LEE + RR
Sbjct: 1029 DEDITFLYEIGEGVAHRSYGLNVARLANLPAPLLEMAKQKSAELEEKIRRR 1072

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BLAST of MELO3C006900 vs. TrEMBL
Match: A0A0A0L5V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182010 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 5.4e-155
Identity = 283/300 (94.33%), Postives = 287/300 (95.67%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA
Sbjct: 812  VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 871

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV
Sbjct: 872  KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 931

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 183
            AIAYAALH+LLQQKKCLVLFVTHYPKVAEIAKEFPA A  YHVSYLTSHK+PSLSG KST
Sbjct: 932  AIAYAALHSLLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKSPSLSGPKST 991

Query: 184  EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSRE-HL 243
            EDVTYLYKL+ GVAESSFGFKVAQLAQIPLSCIARATEMG+WLEEIV RRAQ KS E HL
Sbjct: 992  EDVTYLYKLISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKSTEQHL 1051

Query: 244  PEISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLGR 303
             E SVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADV GTWCHQIYQAR MAMDLLGR
Sbjct: 1052 AEASVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADV-GTWCHQIYQARSMAMDLLGR 1110

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BLAST of MELO3C006900 vs. TrEMBL
Match: W9S4U9_9ROSA (DNA mismatch repair protein Msh3 OS=Morus notabilis GN=L484_015774 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.0e-96
Identity = 195/303 (64.36%), Postives = 230/303 (75.91%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE  LQ NFVPNDT+L A+ E+CQIVTGPNMGGKSCYIRQVALIA+M+QVGSFVPA SA
Sbjct: 777  VLESILQDNFVPNDTDLHADREYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSA 836

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQQGRSTFLEE++ETS+IL+    RSLVIIDELGRGTSTHDGV
Sbjct: 837  KLHVLDGIYTRMGASDSIQQGRSTFLEELSETSNILKSCKERSLVIIDELGRGTSTHDGV 896

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLS--GQK 183
            AIAYA LH+LL+QK+C+VLFVTHYPK+AEI  EFP    AYHVS+LTSH+N        +
Sbjct: 897  AIAYATLHHLLEQKRCMVLFVTHYPKIAEIIAEFPGSVGAYHVSHLTSHRNEETGTMNSE 956

Query: 184  STEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHK-SRE 243
            S  DVTYLYKLVPGV+E SFGFKVA+LAQ+P SCI RA  M   LE +V+ R+ +K  + 
Sbjct: 957  SDHDVTYLYKLVPGVSEKSFGFKVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCGKM 1016

Query: 244  HLPEISVKGLEWQSFQSFLER---IDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAM 301
            HL E S    + +     +E    +DGY+EFFL LK  + S D        + QAR +A 
Sbjct: 1017 HLLETSSLCQKDEKMTLEMESSKCLDGYKEFFLILKNAL-SVDDHAKSLQLLNQARGLAN 1076

[Close]

BLAST of MELO3C006900 vs. TrEMBL
Match: M5XM20_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000560mg PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 9.7e-96
Identity = 194/317 (61.20%), Postives = 232/317 (73.19%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE TLQ NFVPNDT+L A+ E+CQI+TGPNMGGKSCYIRQVALIA+M+QVGSFVPA SA
Sbjct: 780  VLETTLQDNFVPNDTDLQADREYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASSA 839

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGI+TRMGASDSI QGRSTFLEE++E SHIL + ++RSLVIIDELGRGTSTHDGV
Sbjct: 840  KLHVLDGIFTRMGASDSIHQGRSTFLEELSEASHILHNCTARSLVIIDELGRGTSTHDGV 899

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSG-QKS 183
            AIAYA LHNLLQQKKC+VLFVTHYPK+A I  EFP    AYHVSYLTS+++    G Q  
Sbjct: 900  AIAYATLHNLLQQKKCMVLFVTHYPKIAYIRTEFPGSVEAYHVSYLTSNRDMDTVGMQSE 959

Query: 184  TEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKS---- 243
             EDVTYLYKLVPGV+E SFGFKVA+LAQ+P SCI +AT M   LE +V  RA+++     
Sbjct: 960  NEDVTYLYKLVPGVSERSFGFKVAELAQLPSSCIRQATIMAARLEAVVNSRARNRHGKNW 1019

Query: 244  ------REHLPEISVKGLE-----WQSFQSFLERIDG--YEEFFLFLKATVRSADVMGTW 303
                   +   E   + LE      + +   LE  +G  Y++FF+ LKA +   D     
Sbjct: 1020 LLKSLVTDQKKEAQDEMLESPECLREGWSPVLEETNGGAYQKFFINLKAAIIDVDDPVKS 1079

[Close]

BLAST of MELO3C006900 vs. TrEMBL
Match: A0A151U6E1_CAJCA (DNA mismatch repair protein Msh3 OS=Cajanus cajan GN=KK1_007579 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.9e-92
Identity = 192/309 (62.14%), Postives = 228/309 (73.79%), Query Frame = 1


Query: 4   VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
           VLE TLQ NFVPNDTN+ A+GE+CQIVTGPNMGGKSCY+RQVALIA+M+QVGSFVPA SA
Sbjct: 603 VLETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYVRQVALIAIMAQVGSFVPASSA 662

Query: 64  KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
           KLHVLDGIYTRMGASDSIQQGRSTFLEE++ETSHIL   +  SLVIIDELGRGTSTHDG+
Sbjct: 663 KLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTEHSLVIIDELGRGTSTHDGM 722

Query: 124 AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSH---KNPSLSGQ 183
           AIA+A LH LL+QK+ +VLFVTHYPK+A +A EFP    AYHVS+LTS    KN +L   
Sbjct: 723 AIAHATLHYLLKQKRSMVLFVTHYPKIANLAAEFPGSVAAYHVSHLTSRDASKNSNLD-- 782

Query: 184 KSTEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSR- 243
               DVTYLYKLVPGV+E SFGFKVAQLAQ+P  CI+RA  M   LE +V  R   +SR 
Sbjct: 783 ---HDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAMVMASKLEALVNNRIHSRSRK 842

Query: 244 EHLPEISVKGLEWQSFQS------FLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQAR 303
           E L ++ V G E +   +        E    Y++F+L LKA ++  D    + H +  AR
Sbjct: 843 ELLLDMLVIGQEQEQLMAQPYDRPHQEFGMAYKDFYLNLKAALQDDDCAKNF-HLLEHAR 902

[Close]

BLAST of MELO3C006900 vs. TrEMBL
Match: A0A067JHN8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26124 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.1e-91
Identity = 194/316 (61.39%), Postives = 228/316 (72.15%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE  L+ NFVPNDT+L A+GE CQIVTGPNMGGKSCYIRQVALIALM+QVGSFVPA SA
Sbjct: 791  VLETMLEDNFVPNDTHLHADGEFCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPASSA 850

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQQGRSTFLEE++E S+IL   ++ SLVIIDELGRGTSTHDG 
Sbjct: 851  KLHVLDGIYTRMGASDSIQQGRSTFLEELSEASNILHKCTANSLVIIDELGRGTSTHDGE 910

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQK-S 183
            AIAYA LH+LL+QKKCLVLFVTHY K+AEI  EFP+   AYHVSYLTS KN  ++G K  
Sbjct: 911  AIAYATLHHLLEQKKCLVLFVTHYTKIAEIKNEFPSSVGAYHVSYLTSEKNLGVTGSKFD 970

Query: 184  TEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHK-SREH 243
             EDVTYLYKLVPGV+  SFGFKVAQLAQ+P SCI RA+ M   LE +V+ R + K  R  
Sbjct: 971  NEDVTYLYKLVPGVSGRSFGFKVAQLAQLPSSCIRRASVMAARLEMVVSHRMEDKLVRRQ 1030

Query: 244  LPEISVKGLEWQSFQSFLE--------RIDGYEE-------FFLFLKATVRSADVMGTWC 303
            L E      + ++++   E        +I+ YEE        FL LK  +   D   ++ 
Sbjct: 1031 LLETPTSDQQQETWEKTSESPDCFHSGKIEKYEELDNDYQKLFLNLKFAMLDGDSAKSF- 1090

[Close]

BLAST of MELO3C006900 vs. TAIR10
Match: AT4G25540.1 (AT4G25540.1 homolog of DNA mismatch repair protein MSH3)

HSP 1 Score: 317.4 bits (812), Expect = 9.6e-87
Identity = 173/278 (62.23%), Postives = 196/278 (70.50%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE  LQ NFVPNDT L A GE+CQI+TGPNMGGKSCYIRQVALI++M+QVGSFVPA  A
Sbjct: 789  VLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFA 848

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDG++TRMGASDSIQ GRSTFLEE++E SHI+R  SSRSLVI+DELGRGTSTHDGV
Sbjct: 849  KLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGV 908

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 183
            AIAYA L +LL +K+CLVLFVTHYP++AEI+  FP     YHVSYLT  K+    G    
Sbjct: 909  AIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD---KGSYDH 968

Query: 184  EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLE-EIVARRAQHKSREHL 243
            +DVTYLYKLV G+   SFGFKVAQLAQIP SCI RA  M   LE E+ AR    +  E  
Sbjct: 969  DDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARERNTRMGEPE 1028

Query: 244  PEISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSAD 281
                 +G E        E I    + F  LK  +   D
Sbjct: 1029 GHEEPRGAE--------ESISALGDLFADLKFALSEED 1055

[Close]

BLAST of MELO3C006900 vs. TAIR10
Match: AT3G18524.1 (AT3G18524.1 MUTS homolog 2)

HSP 1 Score: 178.3 bits (451), Expect = 7.0e-45
Identity = 106/250 (42.40%), Postives = 142/250 (56.80%), Query Frame = 1


Query: 12  NFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGI 71
           NF+PND  L       QIVTGPNMGGKS +IRQV +I LM+QVGSFVP   A + + D I
Sbjct: 646 NFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCI 705

Query: 72  YTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALH 131
           + R+GA D   +G STF++EM ET+ IL+ +S +SL+IIDELGRGTST+DG  +A+A   
Sbjct: 706 FARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICE 765

Query: 132 NLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKSTED--VTYL 191
           +L+Q K+   LF TH+ ++  +A+     A +          N  +S    TE   +T L
Sbjct: 766 HLVQVKRAPTLFATHFHELTALAQ-----ANSEVSGNTVGVANFHVSAHIDTESRKLTML 825

Query: 192 YKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIV--------ARRAQHKSREH 251
           YK+ PG  + SFG  VA+ A  P S +A A E    LE+              + KSRE 
Sbjct: 826 YKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMIINNEESGKRKSRED 885

[Close]

BLAST of MELO3C006900 vs. TAIR10
Match: AT3G24495.1 (AT3G24495.1 MUTS homolog 7)

HSP 1 Score: 152.1 bits (383), Expect = 5.4e-37
Identity = 86/225 (38.22%), Postives = 129/225 (57.33%), Query Frame = 1


Query: 29   IVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQGRSTF 88
            ++TGPNMGGKS  +R   L  + +Q+G +VP  S ++ ++D I+TR+GASD I  G STF
Sbjct: 850  LLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTF 909

Query: 89   LEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHNLLQQKKCLVLFVTHYP 148
            L E TET+ +L++++  SLVI+DELGRGTST DG AIAY+   +L+++ +C +LF THY 
Sbjct: 910  LVECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHY- 969

Query: 149  KVAEIAKEFPACARAYHVSYLTSHKNPS-LSGQKSTEDVTYLYKLVPGVAESSFGFKVAQ 208
                + KEF +  R        + K+ S    +   +D+ +LY+L  G    S+G +VA 
Sbjct: 970  --HPLTKEFASHPRVTSKHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESYGLQVAL 1029

Query: 209  LAQIPLSCIARATEMGIWLEEIVARRAQHKSREHLPEISVKGLEW 253
            +A IP   +  A+     ++  +      KS E   E S    +W
Sbjct: 1030 MAGIPNQVVETASGAAQAMKRSIGE--NFKSSELRSEFSSLHEDW 1069

[Close]

BLAST of MELO3C006900 vs. TAIR10
Match: AT4G02070.1 (AT4G02070.1 MUTS homolog 6)

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-36
Identity = 85/233 (36.48%), Postives = 133/233 (57.08%), Query Frame = 1


Query: 10   QGNFVPNDTNLD-ANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVL 69
            +G+FVPN+  +  A      ++TGPNMGGKS  +RQV L  +++Q+G+ VPA + ++  +
Sbjct: 1060 RGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPV 1119

Query: 70   DGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYA 129
            D I  RMGA D I  G+STFL E++ET+ +L  ++  SLV++DELGRGT+T DG AIA +
Sbjct: 1120 DKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAES 1179

Query: 130  ALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKSTEDVTY 189
             L + +++ +C   F THY +++   +  P  +  +    +         G    E+VT+
Sbjct: 1180 VLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIG-------EGIGGVEEVTF 1239

Query: 190  LYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSREH 242
            LY+L PG    S+G  VA+LA +P   + RA       E +  +   H+  +H
Sbjct: 1240 LYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGK--NHRKTDH 1283

[Close]

BLAST of MELO3C006900 vs. TAIR10
Match: AT4G17380.1 (AT4G17380.1 MUTS-like protein 4)

HSP 1 Score: 125.2 bits (313), Expect = 7.0e-29
Identity = 61/151 (40.40%), Postives = 99/151 (65.56%), Query Frame = 1


Query: 8   TLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHV 67
           ++  +FV N   + +   +  +V GPNM GKS Y++QV L+ +++Q+G +VPA  A + V
Sbjct: 530 SIHNDFVSNSIFM-SEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRV 589

Query: 68  LDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAY 127
           +D I+TRMG  D+++   STF+ EM ET+ I+++ ++RSL+++DELGR TS+ DG+A+A+
Sbjct: 590 VDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGLAMAW 649

Query: 128 AALHNLLQQKKCLVLFVTHYPKVAEIAKEFP 159
           +    LL   K   +F TH   +AE+A  +P
Sbjct: 650 SCCEYLL-SLKAYTVFATHMDSLAELATIYP 678

[Close]

BLAST of MELO3C006900 vs. NCBI nr
Match: gi|659077452|ref|XP_008439212.1| (PREDICTED: DNA mismatch repair protein MSH3 [Cucumis melo])

HSP 1 Score: 598.6 bits (1542), Expect = 6.1e-168
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA
Sbjct: 892  VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 951

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV
Sbjct: 952  KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 1011

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 183
            AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST
Sbjct: 1012 AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 1071

Query: 184  EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSREHLP 243
            EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSREHLP
Sbjct: 1072 EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSREHLP 1131

Query: 244  EISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLGR 303
            EISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLGR
Sbjct: 1132 EISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLGR 1190

[Close]

BLAST of MELO3C006900 vs. NCBI nr
Match: gi|778679553|ref|XP_004140847.2| (PREDICTED: DNA mismatch repair protein MSH3 [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 7.8e-155
Identity = 283/300 (94.33%), Postives = 287/300 (95.67%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA
Sbjct: 812  VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 871

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV
Sbjct: 872  KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 931

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKST 183
            AIAYAALH+LLQQKKCLVLFVTHYPKVAEIAKEFPA A  YHVSYLTSHK+PSLSG KST
Sbjct: 932  AIAYAALHSLLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKSPSLSGPKST 991

Query: 184  EDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSRE-HL 243
            EDVTYLYKL+ GVAESSFGFKVAQLAQIPLSCIARATEMG+WLEEIV RRAQ KS E HL
Sbjct: 992  EDVTYLYKLISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKSTEQHL 1051

Query: 244  PEISVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLGR 303
             E SVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADV GTWCHQIYQAR MAMDLLGR
Sbjct: 1052 AEASVKGLEWQSFQSFLERIDGYEEFFLFLKATVRSADV-GTWCHQIYQARSMAMDLLGR 1110

[Close]

BLAST of MELO3C006900 vs. NCBI nr
Match: gi|703141151|ref|XP_010107433.1| (DNA mismatch repair protein Msh3 [Morus notabilis])

HSP 1 Score: 360.5 bits (924), Expect = 2.8e-96
Identity = 195/303 (64.36%), Postives = 230/303 (75.91%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE  LQ NFVPNDT+L A+ E+CQIVTGPNMGGKSCYIRQVALIA+M+QVGSFVPA SA
Sbjct: 777  VLESILQDNFVPNDTDLHADREYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSA 836

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQQGRSTFLEE++ETS+IL+    RSLVIIDELGRGTSTHDGV
Sbjct: 837  KLHVLDGIYTRMGASDSIQQGRSTFLEELSETSNILKSCKERSLVIIDELGRGTSTHDGV 896

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLS--GQK 183
            AIAYA LH+LL+QK+C+VLFVTHYPK+AEI  EFP    AYHVS+LTSH+N        +
Sbjct: 897  AIAYATLHHLLEQKRCMVLFVTHYPKIAEIIAEFPGSVGAYHVSHLTSHRNEETGTMNSE 956

Query: 184  STEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHK-SRE 243
            S  DVTYLYKLVPGV+E SFGFKVA+LAQ+P SCI RA  M   LE +V+ R+ +K  + 
Sbjct: 957  SDHDVTYLYKLVPGVSEKSFGFKVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCGKM 1016

Query: 244  HLPEISVKGLEWQSFQSFLER---IDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAM 301
            HL E S    + +     +E    +DGY+EFFL LK  + S D        + QAR +A 
Sbjct: 1017 HLLETSSLCQKDEKMTLEMESSKCLDGYKEFFLILKNAL-SVDDHAKSLQLLNQARGLAN 1076

[Close]

BLAST of MELO3C006900 vs. NCBI nr
Match: gi|596018729|ref|XP_007218906.1| (hypothetical protein PRUPE_ppa000560mg [Prunus persica])

HSP 1 Score: 358.2 bits (918), Expect = 1.4e-95
Identity = 194/317 (61.20%), Postives = 232/317 (73.19%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE TLQ NFVPNDT+L A+ E+CQI+TGPNMGGKSCYIRQVALIA+M+QVGSFVPA SA
Sbjct: 780  VLETTLQDNFVPNDTDLQADREYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASSA 839

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGI+TRMGASDSI QGRSTFLEE++E SHIL + ++RSLVIIDELGRGTSTHDGV
Sbjct: 840  KLHVLDGIFTRMGASDSIHQGRSTFLEELSEASHILHNCTARSLVIIDELGRGTSTHDGV 899

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSG-QKS 183
            AIAYA LHNLLQQKKC+VLFVTHYPK+A I  EFP    AYHVSYLTS+++    G Q  
Sbjct: 900  AIAYATLHNLLQQKKCMVLFVTHYPKIAYIRTEFPGSVEAYHVSYLTSNRDMDTVGMQSE 959

Query: 184  TEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKS---- 243
             EDVTYLYKLVPGV+E SFGFKVA+LAQ+P SCI +AT M   LE +V  RA+++     
Sbjct: 960  NEDVTYLYKLVPGVSERSFGFKVAELAQLPSSCIRQATIMAARLEAVVNSRARNRHGKNW 1019

Query: 244  ------REHLPEISVKGLE-----WQSFQSFLERIDG--YEEFFLFLKATVRSADVMGTW 303
                   +   E   + LE      + +   LE  +G  Y++FF+ LKA +   D     
Sbjct: 1020 LLKSLVTDQKKEAQDEMLESPECLREGWSPVLEETNGGAYQKFFINLKAAIIDVDDPVKS 1079

[Close]

BLAST of MELO3C006900 vs. NCBI nr
Match: gi|1009122578|ref|XP_015878076.1| (PREDICTED: DNA mismatch repair protein MSH3 [Ziziphus jujuba])

HSP 1 Score: 355.9 bits (912), Expect = 6.9e-95
Identity = 193/315 (61.27%), Postives = 236/315 (74.92%), Query Frame = 1


Query: 4    VLEGTLQGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSA 63
            VLE  LQ NFVPNDT+L A  E+CQIVTGPNMGGKSCYIRQVALIA+M+QVGSFVPA SA
Sbjct: 813  VLESVLQDNFVPNDTDLHAAREYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSA 872

Query: 64   KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGV 123
            KLHVLDGIYTRMGASDSIQ+GRSTFLEE++E SHILR+S+ RSLVI+DELGRGTSTHDGV
Sbjct: 873  KLHVLDGIYTRMGASDSIQRGRSTFLEELSEASHILRNSTERSLVILDELGRGTSTHDGV 932

Query: 124  AIAYAALHNLLQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKS- 183
            AIAYA LH+L+++K+C+VLFVTHYPK+A+I  +FP    AYHVSYLTSHK+      KS 
Sbjct: 933  AIAYATLHHLIEKKRCMVLFVTHYPKIADITTQFPGSVGAYHVSYLTSHKDEDAVSLKSD 992

Query: 184  TEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKS--RE 243
             EDVTYLY+LVPGV E SFGFKVA+LAQ+P  CI+RA+ M   LE +V+  A+++S  RE
Sbjct: 993  QEDVTYLYRLVPGVCERSFGFKVAELAQLPSLCISRASIMAARLEMMVSNEARNRSAKRE 1052

Query: 244  HLPEISVKGLE----------WQS---FQSFLERIDGYEEFFLFLKATVRSADVMGTWCH 303
             +    + G E          W S    +   E  +GY+EFFL LKA +   D   ++  
Sbjct: 1053 LVEPTLIYGKEEQEKKKECSNWSSTGGVEISEEINNGYKEFFLNLKAAMADHDHANSY-Q 1112

The following BLAST results are available for this feature:

BLAST of MELO3C006900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MSH3_ARATH	1.7e-85	62.23	DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1 SV=2	[more]
MSH3_HUMAN	7.5e-57	48.21	DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4	[more]
MSH3_MOUSE	1.3e-56	48.46	DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3	[more]
MSH3_DICDI	3.5e-54	49.14	DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum GN=msh3 PE=3 SV=1	[more]
MSH3_EMENI	1.7e-53	48.05	DNA mismatch repair protein msh3 OS=Emericella nidulans (strain FGSC A4 / ATCC 3...	[more]

BLAST of MELO3C006900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5V6_CUCSA	5.4e-155	94.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182010 PE=4 SV=1	[more]
W9S4U9_9ROSA	2.0e-96	64.36	DNA mismatch repair protein Msh3 OS=Morus notabilis GN=L484_015774 PE=3 SV=1	[more]
M5XM20_PRUPE	9.7e-96	61.20	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000560mg PE=3 SV=1	[more]
A0A151U6E1_CAJCA	2.9e-92	62.14	DNA mismatch repair protein Msh3 OS=Cajanus cajan GN=KK1_007579 PE=4 SV=1	[more]
A0A067JHN8_JATCU	1.1e-91	61.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26124 PE=4 SV=1	[more]

BLAST of MELO3C006900 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25540.1	9.6e-87	62.23	homolog of DNA mismatch repair protein MSH3	[more]
AT3G18524.1	7.0e-45	42.40	MUTS homolog 2	[more]
AT3G24495.1	5.4e-37	38.22	MUTS homolog 7	[more]
AT4G02070.1	2.7e-36	36.48	MUTS homolog 6	[more]
AT4G17380.1	7.0e-29	40.40	MUTS-like protein 4	[more]

BLAST of MELO3C006900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077452\|ref\|XP_008439212.1\|	6.1e-168	100.00	PREDICTED: DNA mismatch repair protein MSH3 [Cucumis melo]	[more]
gi\|778679553\|ref\|XP_004140847.2\|	7.8e-155	94.33	PREDICTED: DNA mismatch repair protein MSH3 [Cucumis sativus]	[more]
gi\|703141151\|ref\|XP_010107433.1\|	2.8e-96	64.36	DNA mismatch repair protein Msh3 [Morus notabilis]	[more]
gi\|596018729\|ref\|XP_007218906.1\|	1.4e-95	61.20	hypothetical protein PRUPE_ppa000560mg [Prunus persica]	[more]
gi\|1009122578\|ref\|XP_015878076.1\|	6.9e-95	61.27	PREDICTED: DNA mismatch repair protein MSH3 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000432	DNA_mismatch_repair_MutS_C
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0030983	mismatched DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006298	mismatch repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007126	meiotic nuclear division
biological_process	GO:0006298	mismatch repair
biological_process	GO:0000710	meiotic mismatch repair
biological_process	GO:0007131	reciprocal meiotic recombination
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0032300	mismatch repair complex
cellular_component	GO:0000228	nuclear chromosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030983	mismatched DNA binding
molecular_function	GO:0003684	damaged DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006900T1	MELO3C006900T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000432	DNA mismatch repair protein MutS, C-terminal	PFAM	PF00488	MutS_V	coord: 28..222 score: 9.6
IPR000432	DNA mismatch repair protein MutS, C-terminal	SMART	SM00534	mutATP5	coord: 25..224 score: 1.8E
IPR000432	DNA mismatch repair protein MutS, C-terminal	PROSITE	PS00486	DNA_MISMATCH_REPAIR_2	coord: 106..122 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 7..222 score: 1.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..222 score: 3.28
None	No IPR available	PANTHER	PTHR11361	DNA MISMATCH REPAIR MUTS RELATED PROTEINS	coord: 4..302 score: 3.0E
None	No IPR available	PANTHER	PTHR11361:SF34	DNA MISMATCH REPAIR PROTEIN MSH3	coord: 4..302 score: 3.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006900	Csa3G182010	Cucumber (Chinese Long) v2	cumeB236
MELO3C006900	Cla006188	Watermelon (97103) v1	mewmB461
MELO3C006900	ClCG05G007980	Watermelon (Charleston Gray)	mewcgB427
MELO3C006900	Cla97C05G090000	Watermelon (97103) v2	mewmbB434
MELO3C006900	Bhi01G000968	Wax gourd	mewgoB541
MELO3C006900	CSPI03G16850	Wild cucumber (PI 183967)	cpimeB230
MELO3C006900	Cucsa.107670	Cucumber (Gy14) v1	cgymeB142
MELO3C006900	CmaCh16G001300	Cucurbita maxima (Rimu)	cmameB296
MELO3C006900	CmoCh16G001350	Cucurbita moschata (Rifu)	cmomeB289
MELO3C006900	Lsi05G012360	Bottle gourd (USVL1VR-Ls)	lsimeB379
MELO3C006900	CsGy3G016940	Cucumber (Gy14) v2	cgybmeB200
MELO3C006900	CsaV3_3G017020	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006900	Silver-seed gourd	carmeB0709
MELO3C006900	Silver-seed gourd	carmeB0732
MELO3C006900	Silver-seed gourd	carmeB0966
MELO3C006900	Cucumber (Chinese Long) v3	cucmeB415
MELO3C006900	Watermelon (97103) v2	mewmbB424
MELO3C006900	Watermelon (97103) v2	mewmbB437
MELO3C006900	Wax gourd	mewgoB518
MELO3C006900	Melon (DHL92) v3.5.1	memeB015
MELO3C006900	Melon (DHL92) v3.5.1	memeB150
MELO3C006900	Cucumber (Gy14) v1	cgymeB438
MELO3C006900	Cucumber (Gy14) v1	cgymeB497
MELO3C006900	Cucurbita maxima (Rimu)	cmameB375
MELO3C006900	Cucurbita maxima (Rimu)	cmameB579
MELO3C006900	Cucurbita maxima (Rimu)	cmameB853
MELO3C006900	Cucurbita moschata (Rifu)	cmomeB368
MELO3C006900	Cucurbita moschata (Rifu)	cmomeB567
MELO3C006900	Cucurbita moschata (Rifu)	cmomeB835
MELO3C006900	Wild cucumber (PI 183967)	cpimeB249
MELO3C006900	Wild cucumber (PI 183967)	cpimeB403
MELO3C006900	Cucumber (Chinese Long) v2	cumeB254
MELO3C006900	Cucumber (Chinese Long) v2	cumeB405
MELO3C006900	Watermelon (Charleston Gray)	mewcgB422
MELO3C006900	Watermelon (Charleston Gray)	mewcgB433
MELO3C006900	Watermelon (97103) v1	mewmB470
MELO3C006900	Watermelon (97103) v1	mewmB481
MELO3C006900	Cucurbita pepo (Zucchini)	cpemeB043
MELO3C006900	Cucurbita pepo (Zucchini)	cpemeB190
MELO3C006900	Cucurbita pepo (Zucchini)	cpemeB697
MELO3C006900	Cucurbita pepo (Zucchini)	cpemeB701
MELO3C006900	Bottle gourd (USVL1VR-Ls)	lsimeB036
MELO3C006900	Bottle gourd (USVL1VR-Ls)	lsimeB375
MELO3C006900	Cucumber (Gy14) v2	cgybmeB353