BLAST of CmaCh16G001300 vs. Swiss-Prot
Match:
MSH3_ARATH (DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1 SV=2)
HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 624/1107 (56.37%), Postives = 771/1107 (69.65%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQPFSPPKISATVTFSPSKR-LISSAL 60
MGKQKQQ ISRFFAPKPKSP+ + + + P PPKISATV+FSPSKR L+S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTP-----PPKISATVSFSPSKRKLLSDHL 60
Query: 61 ASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAPTGG 120
A+ S K+PKLSPHT NP+P +P LH+RFL++FL+P + T
Sbjct: 61 AAA-----SPKKPKLSPHTQNPVP---DPNLHQRFLQRFLEPSPEEYVPE-------TSS 120
Query: 121 DAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASI 180
KYTPLE QVV+LK +YPDV+LMVEVGYRYRFFG+DAEIAARVLGIYAH+D NFMTAS+
Sbjct: 121 SRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASV 180
Query: 181 PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQNL 240
PTFRLN HVRRLV+AGYK+GVVKQTETAAIK+HG+N+ GPF RGLSALYTKATLEA +++
Sbjct: 181 PTFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDI 240
Query: 241 GGA---EEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREYD 300
G EEG G +SN+L CVV++ + + L IE DV++G+V +EISTG+V+Y E++
Sbjct: 241 SGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFN 300
Query: 301 DNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKDGSAL 360
DNFMRSGLEA++LSLSPAELLLG P+S+ TEK L+ +AGP SNVRVE S DCF +G+A+
Sbjct: 301 DNFMRSGLEAVILSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAV 360
Query: 361 AEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQF 420
EV SL E I NL D + A + + + IMNMP+L +QALALT +LKQF
Sbjct: 361 DEVISLCEKISAGNLE-DDKEMKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQF 420
Query: 421 GLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI--------------------------- 480
G ERI+ G+SFR S EMTLS NTL QLE+
Sbjct: 421 GFERILYQGASFRSLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSR 480
Query: 481 ------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPELNYIL 540
THPLC+R++I AR +AVSEI+A M S SQ E EE S+ ++ PE +L
Sbjct: 481 LLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVL 540
Query: 541 SSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAG 600
SSVLT + R+ DIQRGITRIFHRTA +E + V++AIL AG
Sbjct: 541 SSVLTAMSRSSDIQRGITRIFHRTAKATEF-------------------IAVMEAILLAG 600
Query: 601 KQLQQFHIDEEDDNYSSESM-IGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDL 660
KQ+Q+ I ++ + S +S + S LLRKLI SS ++ A KLLS ++KEAA +GDL
Sbjct: 601 KQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDL 660
Query: 661 PNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELAL 720
+++I ++DQFP++A AR+ REKLDS I +RK+L +R LEF VSG THLIEL +
Sbjct: 661 LDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPV 720
Query: 721 DVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAE 780
D KVP NWVK+NSTKKTIRYHPPE++A LDEL+LA E L + +R +WD FL FSRYY +
Sbjct: 721 DSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTD 780
Query: 781 FQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVP 840
F++AVQALA++DCL+SL+ LSR+KNYVRPEFV D EP +I I SGRHPVLE+ +Q NFVP
Sbjct: 781 FKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVP 840
Query: 841 NDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRM 900
NDT L GE+CQI+TGPNMGGKSCYIRQVALI++MAQVGS+VPA AKLHVLDG++TRM
Sbjct: 841 NDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRM 900
Query: 901 GASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLH 960
GASDSIQ GRSTFLEE++E SHI+ +SRSLVI+DELGRGTSTHDGVAIAYA LQ+LL
Sbjct: 901 GASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLA 960
Query: 961 HKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLVPG 1020
K+CLVLFVTHYP++A+I+ FP S G YHVSYLT + G DV YLYKLV G
Sbjct: 961 EKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD---KGSYDHDDVTYLYKLVRG 1020
Query: 1021 IAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLELES 1070
+ SFGFKVAQLAQIP CI RA M LE A+ + RE + + +G E
Sbjct: 1021 LCSRSFGFKVAQLAQIPPSCIRRAISMAAKLE------AEVRARERNTRMGEPEGHEEPR 1055
BLAST of CmaCh16G001300 vs. Swiss-Prot
Match:
MSH3_MOUSE (DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3)
HSP 1 Score: 543.1 bits (1398), Expect = 7.2e-153
Identity = 339/928 (36.53%), Postives = 514/928 (55.39%), Query Frame = 1
Query: 123 YTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTF 182
YTPLELQ +D+K+++ D +L VE GY+YRFFG+DAEIAAR L IY HLD NFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 183 RLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL--EAVQNLG 242
RL VHVRRLV+ GYKVGVVKQTETAA+KA G NK F R L+ALYTK+TL E V L
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTLIGEDVNPLI 306
Query: 243 GAEEGCGGE-------SNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYR 302
++ + +NYL C+ E+ +N+ + + + V G+V ++ +TG+V++
Sbjct: 307 RLDDSVNIDEVMTDTSTNYLLCIYEEK---ENIKDKKKGNLSV--GVVGVQPATGEVVFD 366
Query: 303 EYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPA---SNVRVEHVSRDCF 362
+ D+ R LE + SL P ELLL +S+ TE L+ + +RVE ++ F
Sbjct: 367 CFQDSASRLELETRISSLQPVELLLPSDLSEPTEMLIQRATNVSVRDDRIRVERMNNTYF 426
Query: 363 KDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTI 422
+ A VT Y D+ + ++ ++N+ + ALA I
Sbjct: 427 EYSHAFQTVTEFYAREIVDSQGSQ----------------SLSGVINLEKPVICALAAVI 486
Query: 423 RYLKQFGLERIVSLGSSFRPFSCKME-MTLSGNTLTQLEI----THPLCERDMIIARQEA 482
RYLK+F LE+++S SF+ S ME M ++G TL LE+ T + ++
Sbjct: 487 RYLKEFNLEKMLSKPESFKQLSSGMEFMRINGTTLRNLEMVQNQTDMKTKGSLLWVLDHT 546
Query: 483 VSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPEL---NYILSSVLTTLGRAPDIQRGITR 542
+ + V+Q + + E ++ + + L + + + L + PD++RG+
Sbjct: 547 KTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVERGLCS 606
Query: 543 IFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAGKQLQQFHIDEEDDNYSSES 602
I+H+ + E F + L +++ L A H+
Sbjct: 607 IYHKKCSTQE-------------FFLIVKSLCQLKSELQALMPAVNSHVQ---------- 666
Query: 603 MIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKE 662
S LLR LI+ L+S L ++ AA GD L +D FP + + + E
Sbjct: 667 ---SDLLRALIVE-----LLSPVEHYLKVLNGPAAKVGDKTELFKDLSD-FPLIKKRKNE 726
Query: 663 AQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELALDVK--VPSNWVKINSTKKTI 722
Q + + +RK L + L++ +VSG +IE+ +P++WVK+ STK
Sbjct: 727 IQEVIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVS 786
Query: 723 RYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLA 782
R+HPP ++ + L+ E+L++ W GFL F +Y AV LA++DC++SLA
Sbjct: 787 RFHPPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLA 846
Query: 783 ILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTV--QGNFVPNDTNLDVNGEHCQIVT 842
+++ NY RP E +I+I +GRHP+++ + Q FVPN T+L + E I+T
Sbjct: 847 KVAKQGNYCRPTL---QEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLS-DSERVMIIT 906
Query: 843 GPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEE 902
GPNMGGKS YI+QV L+ +MAQ+GSYVPA A + ++DGI+TRMGA+D+I +GRSTF+E+
Sbjct: 907 GPNMGGKSSYIKQVTLVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEQ 966
Query: 903 MTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKKCLVLFVTHYPKVA 962
+T+T+ I+ ++ +SLVI+DELGRGTSTHDG+AIAYA L+ + K L LFVTHYP V
Sbjct: 967 LTDTAEIIRRASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVC 1026
Query: 963 DITKEFPASAGVYHVSYLTSHE---RPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQL 1022
++ K +P G YH+ +L + + + S + V +LY++ GIA S+G VA+L
Sbjct: 1027 ELEKCYPEQVGNYHMGFLVNEDESKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKL 1057
Query: 1023 AQIPLPCIARATEMGVWLEEIVTRRAQR 1024
A +P + +A LE +V+ R +R
Sbjct: 1087 ADVPREVLQKAAHKSKELEGLVSLRRKR 1057
BLAST of CmaCh16G001300 vs. Swiss-Prot
Match:
MSH3_HUMAN (DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4)
HSP 1 Score: 538.1 bits (1385), Expect = 2.3e-151
Identity = 351/929 (37.78%), Postives = 518/929 (55.76%), Query Frame = 1
Query: 123 YTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTF 182
YTPLELQ +++K+++ D +L VE GY+YRFFG+DAEIAAR L IY HLD NFMTASIPT
Sbjct: 229 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 288
Query: 183 RLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL--EAVQNLG 242
RL VHVRRLV+ GYKVGVVKQTETAA+KA G N+ F R L+ALYTK+TL E V L
Sbjct: 289 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLI 348
Query: 243 GAEEGCGGE-------SNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYR 302
++ + ++YL C+ E V R + ++ IG+V ++ +TG+V++
Sbjct: 349 KLDDAVNVDEIMTDTSTSYLLCISENKENV-----RDKKKGNIFIGIVGVQPATGEVVFD 408
Query: 303 EYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLL---LGYAGPASNVRVEHVSRDCF 362
+ D+ RS LE + SL P ELLL +S+ TE L+ + +RVE + F
Sbjct: 409 SFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYF 468
Query: 363 KDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTI 422
+ A VT Y DTV K +I I I+N+ + +LA I
Sbjct: 469 EYSHAFQAVTEFYAK-------------DTV--DIKGSQI-ISGIVNLEKPVICSLAAII 528
Query: 423 RYLKQFGLERIVSLGSSFRPFSCKME-MTLSGNTLTQLEI----THPLCERDMIIARQEA 482
+YLK+F LE+++S +F+ S KME MT++G TL LEI T + ++
Sbjct: 529 KYLKEFNLEKMLSKPENFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHT 588
Query: 483 VSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPELNY---ILSSVLTTLGRAPDIQRGITR 542
+ + V+Q + + E ++ + + L+ + + L + PDI+RG+
Sbjct: 589 KTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGLCS 648
Query: 543 IFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAGKQLQQFHIDEEDDNYSSES 602
I+H+ + E F V T LY K Q I + S
Sbjct: 649 IYHKKCSTQE------------FFLIVKT--------LYHLKSEFQAIIP------AVNS 708
Query: 603 MIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKE 662
I S LLR +IL L+S L ++++AA GD L +D FP + + + E
Sbjct: 709 HIQSDLLRTVILEIPE--LLSPVEHYLKILNEQAAKVGDKTELFKDLSD-FPLIKKRKDE 768
Query: 663 AQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELALDVK--VPSNWVKINSTKKTI 722
Q +++ + RK L ++ +VSG +IE+ +P++WVK+ STK
Sbjct: 769 IQGVIDEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVS 828
Query: 723 RYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLA 782
R+H P ++ L+ E+L++ W FL FS +Y AV LA++DC++SLA
Sbjct: 829 RFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLA 888
Query: 783 ILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTV--QGNFVPNDTNLDVNGEHCQIVT 842
+++ +Y RP E +IVI +GRHPV++ + Q +VPN+T+L + E I+T
Sbjct: 889 KVAKQGDYCRPTV---QEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIIT 948
Query: 843 GPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEE 902
GPNMGGKS YI+QVALI +MAQ+GSYVPA A + ++DGI+TRMGA+D+I +G+STF+EE
Sbjct: 949 GPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEE 1008
Query: 903 MTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKKCLVLFVTHYPKVA 962
+T+T+ I+ +TS+SLVI+DELGRGTSTHDG+AIAYA L+ + K L LFVTHYP V
Sbjct: 1009 LTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVC 1068
Query: 963 DITKEFPASAGVYHVSYLTSHERPSFSGPKSAQD----VIYLYKLVPGIAESSFGFKVAQ 1022
++ K + G YH+ +L S + P +A+ V +LY++ GIA S+G VA+
Sbjct: 1069 ELEKNYSHQVGNYHMGFLVSEDESKLD-PGAAEQVPDFVTFLYQITRGIAARSYGLNVAK 1103
Query: 1023 LAQIPLPCIARATEMGVWLEEIVTRRAQR 1024
LA +P + +A LE ++ + +R
Sbjct: 1129 LADVPGEILKKAAHKSKELEGLINTKRKR 1103
BLAST of CmaCh16G001300 vs. Swiss-Prot
Match:
MSH3_ASPNC (DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=msh3 PE=3 SV=2)
HSP 1 Score: 506.5 bits (1303), Expect = 7.5e-142
Identity = 336/976 (34.43%), Postives = 531/976 (54.41%), Query Frame = 1
Query: 119 GDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIY----------- 178
G +K TP+E QV+D+K+++ D +L+VEVGY++RFFG+DA +AA+ L I
Sbjct: 203 GGSKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEH 262
Query: 179 ----AHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRG 238
+HLDR F +ASIP RL+VHV+RLV+AG+KVGVV+Q ETAA+KA G N+ PF R
Sbjct: 263 PSEASHLDR-FASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAALKAAGDNRNAPFVRK 322
Query: 239 LSALYTKAT-LEAVQNLGG----AEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKI 298
L+ LYTK T ++ + LGG A G + YL C+ E + D + V++
Sbjct: 323 LTNLYTKGTYIDDAEGLGGPMPAASGGASPATGYLLCITETNAKGWGNDEK------VQV 382
Query: 299 GMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPAS 358
G+VA++ +TGD++Y +++D FMRS +E LL ++P ELL+ +SKATEKL+ +G
Sbjct: 383 GIVAVQPATGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGELSKATEKLVQHLSGSKL 442
Query: 359 NV-----RVEHVSRDCFKDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIK 418
NV RVE V + + + V+S Y K AAD ++L +
Sbjct: 443 NVFGDKTRVERVLKSKTAAAESHSHVSSFYAGKMKTASAADDAQASSLL----------Q 502
Query: 419 EIMNMPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI---- 478
+++N+P L+ I ++K++GLE + L F+ FS + M L+GNTL LEI
Sbjct: 503 KVLNLPEQVTICLSSMIEHMKEYGLEYVFELTKYFQHFSSRSHMLLNGNTLMSLEIYQNQ 562
Query: 479 THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIE----PELNYILSS 538
T + + + M+ V + + + + V +E PE ++
Sbjct: 563 TDHTTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKNPEKTVMVER 622
Query: 539 VLTTLGRA-PDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAGK 598
+ LG+ D+++ + RI++ G R + T L+ +Q I
Sbjct: 623 LKGLLGKVKSDLEKSLIRIYY----------------GKCTRPELLTVLQTMQMI----- 682
Query: 599 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 658
Q+F D +++ S + + I + ++ L I+ AA D
Sbjct: 683 -AQEF----SDVKSPADTGFASTAINEAITCLPT--ILEDVVAFLDKINMHAAKSDD-KY 742
Query: 659 LMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIEL---- 718
++ ++ + S +L+ ++ ++LG + +E+ SV+G +LIE+
Sbjct: 743 AFFREAEETEDISDQKLGIASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSS 802
Query: 719 ALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYY 778
A +VP++WVK++ TKK R+H PEV+ + + E L A +A+ L+ + Y
Sbjct: 803 ASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKY 862
Query: 779 AEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNF 838
F+ +VQALA++DCL +LA ++ YV+PE+ + I + GRHP++E + ++
Sbjct: 863 QPFRDSVQALATLDCLIALATIASQPGYVKPEYT---DHTCIQVDQGRHPMVEQLLLDSY 922
Query: 839 VPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYT 898
VPND +LD + +VTGPNMGGKS Y+RQVALIA+M Q+GSYVPA SAKL +LD ++T
Sbjct: 923 VPNDIDLDSDKTRALLVTGPNMGGKSSYVRQVALIAIMGQIGSYVPAQSAKLGMLDAVFT 982
Query: 899 RMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNL 958
RMGA D++ G STF+ E++ET+ IL +T RSLVI+DELGRGTSTHDGVAIA A L +
Sbjct: 983 RMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYM 1042
Query: 959 LHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLV 1018
+ + L LF+THY ++ + F A + +V H R + SG + +++ +LY++
Sbjct: 1043 VRSIRSLTLFITHYQHLSSMVHSF-ADQELRNV-----HMRFTESGTGTDEEITFLYEVG 1102
Query: 1019 PGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLEL 1057
G+A S+G VA+LA +P + +A + LEE + RR + L A G+ +E
Sbjct: 1103 EGVAHRSYGLNVARLANLPGALLDQARQKSKELEEKIRRR-----KLAGLVTAVGEVIEG 1118
BLAST of CmaCh16G001300 vs. Swiss-Prot
Match:
MSH3_NEOFI (DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=msh3 PE=3 SV=1)
HSP 1 Score: 505.0 bits (1299), Expect = 2.2e-141
Identity = 329/939 (35.04%), Postives = 513/939 (54.63%), Query Frame = 1
Query: 119 GDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIY----------- 178
G +K TPLE QV+++K+++ D +L++EVGY++RFFG+DA IAA+ L I
Sbjct: 200 GGSKLTPLEKQVIEIKRKHMDTVLVIEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEH 259
Query: 179 ---AHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGL 238
AHLDR F +ASIP RL+VHV+RLVSAGYKVGVV+Q ETAA+KA G N+ PF R L
Sbjct: 260 PSEAHLDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAVGDNRNAPFSRKL 319
Query: 239 SALYTKAT-LEAVQNLGGAEEGCGG----ESNYLFCVVEKSMLVDNLDSRIEYGVDVKIG 298
+ LYTK T ++ V+ L GA G + Y+ C+ E + D + V +G
Sbjct: 320 TNLYTKGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKGWGNDEK------VHVG 379
Query: 299 MVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASN 358
+VA++ +TGD+IY +++D FMRS +EA LL ++P EL++ +SKATEKL+ +G N
Sbjct: 380 IVAVQPNTGDIIYDDFEDGFMRSEVEARLLHIAPCELVIVGELSKATEKLVQHLSGSKLN 439
Query: 359 -----VRVEHVSRDCFKDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKE 418
VRV+ V+ K +A+AE S N L A + D + +++
Sbjct: 440 TFGDKVRVDRVA----KKKTAVAESHSHVANFYAAKLKAANTADDAPASN------LLQK 499
Query: 419 IMNMPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI----T 478
++N+P L+ I +L ++GLE I L F+ FS + M L+ NTL LEI T
Sbjct: 500 VLNLPEQVTVCLSAMIEHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQT 559
Query: 479 HPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIE----PELNYILSSV 538
+ + + ++ V + + + E + V +E P+ + +
Sbjct: 560 DHSAKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEELKSPDRTVQVERL 619
Query: 539 LTTLGR-APDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAGKQ 598
LGR D+++ + RI++ G R + T L+ +Q I
Sbjct: 620 KILLGRIKSDLEKNLIRIYY----------------GKCTRPELLTVLQTLQTIAQ---- 679
Query: 599 LQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNL 658
+ + +D+ + ++G + R ++ K L+ I+ AA D
Sbjct: 680 -EYVDVKTPEDSGFTSPILGEAIAR-------VPSILEDVVKFLNKINMHAARNDDKYE- 739
Query: 659 MIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIEL----A 718
+++ ++ + S +L+ ++ L K+ + + SG +LIE+ A
Sbjct: 740 FFRESEETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEVENTAA 799
Query: 719 LDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYA 778
+VP++WVK++ TKK R+H PEV+ L + E L A +A+ L+ + Y
Sbjct: 800 AIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEIATNYQ 859
Query: 779 EFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFV 838
F+ +VQ+LA++DCL SLA ++ YV+PE+ + I + GRHP++E + ++V
Sbjct: 860 SFRDSVQSLATLDCLLSLAAIASQPGYVKPEYT---DQTCIHVEQGRHPMVEQLLLDSYV 919
Query: 839 PNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTR 898
PND +LD + +VTGPNMGGKS Y+RQ+ALIA+MAQ+GSYVPA SAKL +LD ++TR
Sbjct: 920 PNDIDLDSDRTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDAVFTR 979
Query: 899 MGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLL 958
MGA D++ G STF+ E++ET+ IL +T RSLVI+DELGRGTSTHDGVAIA A L ++
Sbjct: 980 MGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMV 1039
Query: 959 HHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLVP 1018
+ L LF+THY ++++ + FP + H R + SG +++ +LY++
Sbjct: 1040 RTIRSLTLFITHYQHLSNMAQSFP------NHELRNVHMRFTESGSGKDEEITFLYEVGE 1083
Query: 1019 GIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRR 1021
G+A S+G VA+LA +P P + A + LEE + RR
Sbjct: 1100 GVAHRSYGLNVARLANLPAPLLEVARQKSSELEERIRRR 1083
BLAST of CmaCh16G001300 vs. TrEMBL
Match:
A0A0A0L5V6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182010 PE=4 SV=1)
HSP 1 Score: 1743.8 bits (4515), Expect = 0.0e+00
Identity = 929/1131 (82.14%), Postives = 988/1131 (87.36%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALA------PPTQPFSPPKISATVTFSPSKRL 60
MGKQKQQVISRFFAPKPKSPS+SSSSSS+ A PPTQPFSP K+SATVTFSPSKRL
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKRL 60
Query: 61 ISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPK 120
ISSA+ASQLTPPKSSKRPKLSPHTHNPLPS+ NP+LH+RFL+K L+P ++SF+ SNQNP+
Sbjct: 61 ISSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPR 120
Query: 121 APTGGDAKY--TPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDR 180
G D KY TPLE QVVDLKKRYPDVLLMVEVGYRYRFFGQDA IAARVLGIYAHLD
Sbjct: 121 TSNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDH 180
Query: 181 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT
Sbjct: 181 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
Query: 241 LEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIY 300
LEA Q+LGGAEEGC GESNYLFC+VE SM V N+D RIE GVDVKIGMVAMEISTGDVIY
Sbjct: 241 LEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAMEISTGDVIY 300
Query: 301 REYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKD 360
EYDDNFMR+GLEAMLLSLSPAELLLGDPISK TEKLLLGYAGPA NVRVE VS DCFKD
Sbjct: 301 GEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPALNVRVERVSGDCFKD 360
Query: 361 GSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRY 420
GSALAEV SLYENID++N D++ P+ VL G+KS+R AIKEI+NMPNLALQALALTIR+
Sbjct: 361 GSALAEVMSLYENIDQNNFTEDNN-PEKVLVGQKSNRSAIKEIVNMPNLALQALALTIRH 420
Query: 421 LKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLE------------------------ 480
LKQFGLERIVSL SSFRPFSCKMEMTLSGNTLTQLE
Sbjct: 421 LKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLHCMNHTLTI 480
Query: 481 ---------ITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPEL 540
ITHPLC+R+MIIARQEAVSEIAA+MVS+KVS N R +EE SDV+VIEPEL
Sbjct: 481 FGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPEL 540
Query: 541 NYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAI 600
NYILSSVLTTLGRAPDIQRGITRIFHRTAAPSE + VIQAI
Sbjct: 541 NYILSSVLTTLGRAPDIQRGITRIFHRTAAPSE-------------------FIAVIQAI 600
Query: 601 LYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQ 660
L+AGKQLQQFHIDEEDDN SSES+IGSKLLRKLILSASSSGLI+IAAKLLSTISKEAADQ
Sbjct: 601 LFAGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQ 660
Query: 661 GDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIE 720
GD PNLMII +DQFPKVARARKEAQSAREKLD+LIT YRKQLGMRKLEFTSVSGTTHLIE
Sbjct: 661 GDFPNLMIIYSDQFPKVARARKEAQSAREKLDALITFYRKQLGMRKLEFTSVSGTTHLIE 720
Query: 721 LALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRY 780
LA+DVKVPS WVKINSTKKT+RYHPPEVLAALDELSLANEELMVASR+AWD FL GFSRY
Sbjct: 721 LAIDVKVPSQWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRDAWDDFLRGFSRY 780
Query: 781 YAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGN 840
YAEFQ+AVQALASIDCLYSLAILSR+KNY RPEFV DDEPAQI +CSGRHPVLE T+QGN
Sbjct: 781 YAEFQAAVQALASIDCLYSLAILSRNKNYARPEFVPDDEPAQIHLCSGRHPVLEGTLQGN 840
Query: 841 FVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIY 900
FVPNDTNLD NGEHCQIVTGPNMGGKSCYIRQVALIALM+QVGS+VPAFSAKLHVLDGIY
Sbjct: 841 FVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIY 900
Query: 901 TRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQN 960
TRMGASDSIQQGRSTFLEEMTETSHIL HS+SRSLVIIDELGRGTSTHDGVAIAYAAL +
Sbjct: 901 TRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHS 960
Query: 961 LLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKL 1020
LL KKCLVLFVTHYPKVA+I KEFPASAGVYHVSYLTSH+ PS SGPKS +DV YLYKL
Sbjct: 961 LLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKSPSLSGPKSTEDVTYLYKL 1020
Query: 1021 VPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLE 1080
+ G+AESSFGFKVAQLAQIPL CIARATEMGVWLEEIVTRRAQRK+ E HL EAS KGLE
Sbjct: 1021 ISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKSTEQHLAEASVKGLE 1080
Query: 1081 LESSECFLEDRIDAYEEFFLFLKATICSPDDMGKHFLQFSQARSMAMDLLG 1091
+S + FLE RID YEEFFLFLKAT+ S D+G Q QARSMAMDLLG
Sbjct: 1081 WQSFQSFLE-RIDGYEEFFLFLKATVRSA-DVGTWCHQIYQARSMAMDLLG 1109
BLAST of CmaCh16G001300 vs. TrEMBL
Match:
M5XM20_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000560mg PE=3 SV=1)
HSP 1 Score: 1298.1 bits (3358), Expect = 0.0e+00
Identity = 719/1151 (62.47%), Postives = 850/1151 (73.85%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQ--------PFSPPKISATVTFSPSK 60
MGKQKQQVISRFFAPKPK+ + SSSSSS+ P + P PPKI+ATV FSPSK
Sbjct: 1 MGKQKQQVISRFFAPKPKTTNPSSSSSSSFPPSSSSSANPHHPPTPPPKITATVNFSPSK 60
Query: 61 R-LISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQ 120
R L+SS L S + PK SK PKLSPHTHNP+P+ NP+LH++FL+K L+P S
Sbjct: 61 RTLLSSHLTS--SSPKPSKLPKLSPHTHNPIPTAPNPSLHQKFLQKLLEP-----SSDVP 120
Query: 121 NPKAPTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLD 180
P + AK+TPLE QVVDLKKRYPDVLLMVEVGY+YRFFGQDAEIAARVLGIYAH+D
Sbjct: 121 EPSPSSNPPAKFTPLEQQVVDLKKRYPDVLLMVEVGYKYRFFGQDAEIAARVLGIYAHMD 180
Query: 181 RNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKA 240
NF+TAS+PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSN+ GPF RGLSALYTKA
Sbjct: 181 HNFLTASVPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNRSGPFGRGLSALYTKA 240
Query: 241 TLEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVI 300
TLEA +++GG EEGCGG+SNYL CVV+KS+ ++N+D ++ G++VKIG+VA+E STGDV+
Sbjct: 241 TLEAAEDVGGKEEGCGGDSNYLACVVDKSVALENVDGGVDSGIEVKIGIVAVEASTGDVV 300
Query: 301 YREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFK 360
Y E++DN MRSGLEA +LSLSPAELL+GDP+SK TEK+LL ++GPASNVRVEHVSRD F
Sbjct: 301 YGEFNDNCMRSGLEAAVLSLSPAELLIGDPLSKQTEKILLAFSGPASNVRVEHVSRDHFN 360
Query: 361 DGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIR 420
+G A AEV SLYEN+D D+L DH DT + + + R+ I+ IMNMPNLA+QALALT+R
Sbjct: 361 EGGAFAEVMSLYENMDGDDLT-DHPKIDTDVKEQSTIRLGIEGIMNMPNLAVQALALTVR 420
Query: 421 YLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI---------------------- 480
+LKQFGLERI+ LG+SFRP S MEMTLS N L QLE+
Sbjct: 421 HLKQFGLERILHLGASFRPLSSSMEMTLSANALQQLEVLKNNADGSESGSLLQYMNQTLT 480
Query: 481 -----------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPE 540
THPLC+ ++I AR +AVSEI
Sbjct: 481 IFGSRLLRHWVTHPLCDGNLICARLDAVSEI----------------------------- 540
Query: 541 LNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQA 600
LNYILSSVLTTLGR+ DIQRGITRIFHRTA PSE + VIQA
Sbjct: 541 LNYILSSVLTTLGRSTDIQRGITRIFHRTATPSEF-------------------IAVIQA 600
Query: 601 ILYAGKQLQQFHIDEEDDNYSSESMIG----SKLLRKLILSASSSGLISIAAKLLSTISK 660
ILYAGKQLQQ + ++ S E++ G S LLRKLI +ASSS +I AA+LLST++K
Sbjct: 601 ILYAGKQLQQLQQLQIEEEGSKENLRGKTVRSDLLRKLICTASSSTVIGNAARLLSTLNK 660
Query: 661 EAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGT 720
EAAD+ DLPNL II++ QFP+VA AR E Q A++KLDSLI++YRKQLGMRKLEF SVSGT
Sbjct: 661 EAADKQDLPNL-IISDGQFPEVAEARMEVQMAKKKLDSLISLYRKQLGMRKLEFISVSGT 720
Query: 721 THLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLS 780
THLIEL LDVKVPSNWVKINSTKKT+RYHPP+VL ALD L+LANE+L V R AWD FLS
Sbjct: 721 THLIELPLDVKVPSNWVKINSTKKTVRYHPPDVLTALDHLALANEKLTVTCRAAWDNFLS 780
Query: 781 GFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLES 840
GF +YYAEFQ+AVQA+AS+DCL+SLA+LSR+KNYVRP V+DDEP QI I SGRHPVLE+
Sbjct: 781 GFGKYYAEFQAAVQAVASLDCLHSLAVLSRNKNYVRPVIVYDDEPVQIHISSGRHPVLET 840
Query: 841 TVQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHV 900
T+Q NFVPNDT+L + E+CQI+TGPNMGGKSCYIRQVALIA+MAQVGS+VPA SAKLHV
Sbjct: 841 TLQDNFVPNDTDLQADREYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLHV 900
Query: 901 LDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAY 960
LDGI+TRMGASDSI QGRSTFLEE++E SHILH+ T+RSLVIIDELGRGTSTHDGVAIAY
Sbjct: 901 LDGIFTRMGASDSIHQGRSTFLEELSEASHILHNCTARSLVIIDELGRGTSTHDGVAIAY 960
Query: 961 AALQNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSA-QDV 1020
A L NLL KKC+VLFVTHYPK+A I EFP S YHVSYLTS+ G +S +DV
Sbjct: 961 ATLHNLLQQKKCMVLFVTHYPKIAYIRTEFPGSVEAYHVSYLTSNRDMDTVGMQSENEDV 1020
Query: 1021 IYLYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHL--- 1080
YLYKLVPG++E SFGFKVA+LAQ+P CI +AT M LE +V RA+ + + L
Sbjct: 1021 TYLYKLVPGVSERSFGFKVAELAQLPSSCIRQATIMAARLEAVVNSRARNRHGKNWLLKS 1080
Query: 1081 ----QEASGKGLELESSECFL--------EDRIDAYEEFFLFLKATICSPDDMGKHFLQF 1090
Q+ + LES EC E AY++FF+ LKA I DD K
Sbjct: 1081 LVTDQKKEAQDEMLESPECLREGWSPVLEETNGGAYQKFFINLKAAIIDVDDPVKSCQYL 1094
BLAST of CmaCh16G001300 vs. TrEMBL
Match:
F6HP08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g01310 PE=4 SV=1)
HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 716/1152 (62.15%), Postives = 861/1152 (74.74%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSS-SSALAP-------PTQPFSPPKISATVTFSPSK 60
MGKQKQQVISRFFAPKPK+PS SSSS S+ +P P P PPKIS TVTFSPSK
Sbjct: 1 MGKQKQQVISRFFAPKPKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60
Query: 61 RLISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQN 120
RL SS ++ PPK+ PK+S +P+ +P+LH++F++K L+P SS+
Sbjct: 61 RLPSSHVSPSTKPPKA---PKIS----HPI----DPSLHQKFVQKLLEP------SSSTP 120
Query: 121 PKAPTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDR 180
K P KYTPLE QVVDLK++YPDVLLMVEVGYRYRFFG+DAEIAARVLGIYAH+D
Sbjct: 121 TKLPLP-TTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDH 180
Query: 181 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
NF+TASIPTFRLNVHVRRLVSAG+KVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT
Sbjct: 181 NFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
Query: 241 LEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNL-DSRIEYGVDVKIGMVAMEISTGDVI 300
LEA + +GG EE CG +NYL CVVEK + V+N D + G DV+IG+VA+E+STGDV+
Sbjct: 241 LEAAEEVGGGEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVV 300
Query: 301 YREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFK 360
+ E++DNFMR+GLEA++LS+SPAELLLG P+SK TEKLLL YAGPASNVRVE SRDCF
Sbjct: 301 HGEFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFS 360
Query: 361 DGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIR 420
DG ALAEV SLYEN+ +N ADH +T + +++ +AI+ IM+MP+LA+QALALTIR
Sbjct: 361 DGGALAEVMSLYENLS-ENSRADHQVDNTEVMEQENHCLAIEGIMSMPDLAVQALALTIR 420
Query: 421 YLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI---------------------- 480
+LKQFGLERI+ +G+SFRPFS MEMTLS N L QLE+
Sbjct: 421 HLKQFGLERILCMGASFRPFSSNMEMTLSANALQQLEVLNNHSDGSESGSLLHTMNHTLT 480
Query: 481 -----------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPE 540
+HPLC+ +MI AR +AVSEI +M S K SQN +E DSDV ++PE
Sbjct: 481 IFGSRLLRHWVSHPLCDSNMISARLDAVSEIVMSMGSCKASQNFGGIDEGDSDVTYVQPE 540
Query: 541 LNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQA 600
+NY+LSSVLTTLGR+PDIQRG+TRIFHRTA SE + V QA
Sbjct: 541 VNYLLSSVLTTLGRSPDIQRGLTRIFHRTATASEF-------------------ISVTQA 600
Query: 601 ILYAGKQLQQFHIDEED-DNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAA 660
IL+AGKQLQ+ HI+E+D D + S LLRKLIL+ASSSG+I AAKLLST++KEAA
Sbjct: 601 ILFAGKQLQRLHIEEKDVDEKGQSRSVRSVLLRKLILTASSSGIIGNAAKLLSTLNKEAA 660
Query: 661 DQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHL 720
D+GDLPNL II++ QFP+VA+AR QSA+EKLD LI +YRKQL M LEF SVSGTTHL
Sbjct: 661 DKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLIGLYRKQLRMNNLEFMSVSGTTHL 720
Query: 721 IELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFS 780
IEL +DVKVPSNWVK+NSTKKT+RYHPPEVL+ALD+LSLANEELM+A R AWD FL F
Sbjct: 721 IELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQLSLANEELMIACRGAWDSFLRAFD 780
Query: 781 RYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQ 840
+Y++EFQ+AVQALA++DCL+SLAILSR+KNYVRP FV D EP Q+ ICSGRHPVLE+ +Q
Sbjct: 781 KYFSEFQAAVQALATLDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGRHPVLETVLQ 840
Query: 841 GNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDG 900
NFVPNDTNL +GE+C+IVTGPNMGGKSCYIRQVALIA+MAQVGS+VPA SAKL VLDG
Sbjct: 841 DNFVPNDTNLHADGEYCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLCVLDG 900
Query: 901 IYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAAL 960
I+TRMG+SDSIQQGRSTFLEE++E SHI+H+ TSRSLVIIDELGRGTSTHDGVAIAYA L
Sbjct: 901 IHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTSTHDGVAIAYATL 960
Query: 961 QNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYL---------TSHERPSFSGPK 1020
LL HK+C+VLFVTHYPK+ D+ EFP S G YHVSY+ T ++ K
Sbjct: 961 HYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRAMDMDTDTDKTDSKSDK 1020
Query: 1021 SAQ-----DVIYLYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQR 1080
+AQ DV YLYKLVPG++E SFGFKVAQLAQ+P CI RA M LE ++ R +
Sbjct: 1021 NAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAELEAMIVSRVKN 1080
Query: 1081 KTREMHLQEASGKGLELESSECFLEDRI----DAYEEFFLFLKATICSPDDMGKHFLQF- 1091
+ + LQ S + + ++S C ++I DA EFFL LK+ + + D + LQF
Sbjct: 1081 SSAQKTLQ-GSQQSISIQSG-CSRAEQIGLEEDACREFFLDLKSALGNADP--ERSLQFL 1110
BLAST of CmaCh16G001300 vs. TrEMBL
Match:
A0A061G834_THECC (DNA mismatch repair protein MSH3 isoform 1 OS=Theobroma cacao GN=TCM_015154 PE=4 SV=1)
HSP 1 Score: 1262.7 bits (3266), Expect = 0.0e+00
Identity = 702/1148 (61.15%), Postives = 842/1148 (73.34%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSS---SSSSALAPPTQPFSPPKISATVTFSPSKR-LIS 60
MGKQKQQVISRFFAPKPK+PS + + SS+ +PP+ P P + ATV+FSPSKR L+S
Sbjct: 1 MGKQKQQVISRFFAPKPKTPSTPTPPANPSSSPSPPSPPIPSPNVKATVSFSPSKRKLLS 60
Query: 61 SALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAP 120
+ L S PK++ LSPHTHNP+P SNP+LH++FL K L+P S + P P
Sbjct: 61 THLTSTPKKPKTT----LSPHTHNPVPLQSNPSLHQKFLHKLLEP-------SPRRPLEP 120
Query: 121 T----GGD-AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLD 180
T G D KYTPLE QVVDLK +YPDVLLMVEVGYR+RFFG+DAEIAA+VLGIYAH+D
Sbjct: 121 TVELSGSDHKKYTPLEQQVVDLKNKYPDVLLMVEVGYRFRFFGKDAEIAAKVLGIYAHVD 180
Query: 181 RNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKA 240
RNF+TAS+PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSN++GPFCRGLSALYTKA
Sbjct: 181 RNFLTASVPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNRVGPFCRGLSALYTKA 240
Query: 241 TLEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVI 300
TLEA +++GG EEGCGGESNYL CVVEK + S VDV++G+V +EISTGDV+
Sbjct: 241 TLEAAEDVGGKEEGCGGESNYLVCVVEKGLEFSGSVSG-SGAVDVRVGIVGVEISTGDVV 300
Query: 301 YREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFK 360
Y E+DD MRSGLEA++ SL+PAELL+G+P+SK TEKLLL YAGPASNVR+EH S DCFK
Sbjct: 301 YGEFDDGVMRSGLEAVVFSLAPAELLVGEPLSKQTEKLLLAYAGPASNVRLEHASCDCFK 360
Query: 361 DGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIR 420
G ALAEV S+YE + +DNLA++ + L + +I+ +MNMP+LALQALALTIR
Sbjct: 361 GGGALAEVMSVYEKMVEDNLASNVNQS---LEATEYSHSSIQGVMNMPDLALQALALTIR 420
Query: 421 YLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI---------------------- 480
+LKQFG ERIV L +SFR S +EM LS NTL QLEI
Sbjct: 421 HLKQFGFERIVCLEASFRSLSSSLEMNLSANTLQQLEILRNNSDGSESGSLLQIMNHTLT 480
Query: 481 -----------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPE 540
THPLC+R MI AR +AVSEIA +M KVSQ+I E + EDSDV + +PE
Sbjct: 481 IYGSRLLRHWVTHPLCDRTMISARLDAVSEIALSMGCYKVSQSIIEIDGEDSDVTIAQPE 540
Query: 541 LNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQA 600
+LSSVLT LGR+PDIQRGITRIFHRTA P+E + VI+A
Sbjct: 541 FYSVLSSVLTFLGRSPDIQRGITRIFHRTATPAEF-------------------IAVIKA 600
Query: 601 ILYAGKQLQQFHIDEE-DDNYSSESMIG---SKLLRKLILSASSSGLISIAAKLLSTISK 660
IL AGKQLQ+ HIDEE +DN S + +G S LL++LIL+ASSS ++ AAKLLS ++K
Sbjct: 601 ILSAGKQLQRLHIDEEHEDNCSKKVRVGIVQSALLKRLILTASSSNVLGNAAKLLSFLNK 660
Query: 661 EAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGT 720
EAAD+GDL NL+II+N+QFP+VARARK Q A+EKLD+LI +YRK+LG LEF VSGT
Sbjct: 661 EAADKGDLTNLIIISNNQFPEVARARKAVQLAKEKLDNLIFLYRKRLGKGNLEFMCVSGT 720
Query: 721 THLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLS 780
THLIEL +D VPSNWVK+NSTKKTIRYHPPEVL ALD+L+LANEEL + R AWD FL
Sbjct: 721 THLIELPIDANVPSNWVKVNSTKKTIRYHPPEVLTALDQLTLANEELTIICRAAWDSFLR 780
Query: 781 GFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLES 840
F YY+EFQ+AVQALA++DCL+SLA LSR+KNYVRP FV D+EP QI I SGRHPVLE+
Sbjct: 781 EFGEYYSEFQAAVQALAALDCLHSLATLSRNKNYVRPIFVDDNEPVQIQIHSGRHPVLET 840
Query: 841 TVQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHV 900
+Q FVPNDT L + E CQIVTGPNMGGKSCYIRQVALIA+MAQVGS+VPA SA LHV
Sbjct: 841 ILQEGFVPNDTTLHADRECCQIVTGPNMGGKSCYIRQVALIAMMAQVGSFVPAASATLHV 900
Query: 901 LDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAY 960
LD IYTRMGASDSIQQGRSTFLEE++E S ILH+ T+RSLV+IDELGRGTSTHDGV+IAY
Sbjct: 901 LDAIYTRMGASDSIQQGRSTFLEELSEASQILHNCTARSLVVIDELGRGTSTHDGVSIAY 960
Query: 961 AALQNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVI 1020
A L +LL +KC+VLFVTHYP++ADI EFP S VYHVSYLT+H KS +V
Sbjct: 961 ATLHHLLEQRKCMVLFVTHYPRIADIKVEFPGSVEVYHVSYLTAHNDEVTMDAKSDHEVT 1020
Query: 1021 YLYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEAS 1080
YLYKLVPG++ SFGFKVAQLAQ+P CI++A M LE I + R ++K+ E E S
Sbjct: 1021 YLYKLVPGVSARSFGFKVAQLAQLPSSCISQAIIMATRLEAIESSRVRKKSEERQ-PETS 1080
Query: 1081 GKGLELESSE-------CFLEDRIDAYEEF------FLFLKATICSPDDMGKHFLQFSQA 1090
ELE+ E F +R++ EEF L + + DD+GK F +A
Sbjct: 1081 SSDQELETQENILKSIGSFSSERLENLEEFASAFSDLLLNLKSARTDDDLGKSFQLLKEA 1113
BLAST of CmaCh16G001300 vs. TrEMBL
Match:
W9S4U9_9ROSA (DNA mismatch repair protein Msh3 OS=Morus notabilis GN=L484_015774 PE=3 SV=1)
HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 701/1143 (61.33%), Postives = 842/1143 (73.67%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVS-----SSSSSALAPPTQPFSPPKISATVTFSPSKRLI 60
MGKQKQQVISRFFAPKPK+PS S SSSSS+L+ + P PPKISATVTFSPSKRL+
Sbjct: 1 MGKQKQQVISRFFAPKPKTPSSSNPSNPSSSSSSLS--SLPIPPPKISATVTFSPSKRLL 60
Query: 61 SSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKA 120
SS+ +S SSK PKL P P P P+LH++FL+K L+P N E + +A
Sbjct: 61 SSSNSSP-----SSKPPKL-PKLSTPTPP---PSLHEKFLQKLLEPTHNLPEKPPPS-QA 120
Query: 121 PTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFM 180
G KYTPLE QVV+LK+++PDVLLMVEVGY+YRFFG DAEIAARVLGIYAH+D +F+
Sbjct: 121 QNGAAVKYTPLEQQVVELKRKHPDVLLMVEVGYKYRFFGDDAEIAARVLGIYAHVDHSFL 180
Query: 181 TASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA 240
TAS+PTFRL+VHVRRLV AGYKVGVVKQTETAAIKAHG N++GPFCRGLSALYT+ATLEA
Sbjct: 181 TASVPTFRLSVHVRRLVGAGYKVGVVKQTETAAIKAHGPNRVGPFCRGLSALYTRATLEA 240
Query: 241 VQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREY 300
+++GG EEG GG+S+YL CVVEK++ DV++G+V +EIS GDV++ E+
Sbjct: 241 AEDVGGREEGWGGDSSYLVCVVEKNVS----------DCDVRVGIVGVEISAGDVVFGEF 300
Query: 301 DDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKDGSA 360
D F+RSG+E+++ SLSPAELLLG P+SK TEKLLLGYAGPAS+VRVE SR+CFKDG A
Sbjct: 301 GDGFLRSGVESVVFSLSPAELLLGCPLSKQTEKLLLGYAGPASHVRVERCSRECFKDGGA 360
Query: 361 LAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQ 420
LAEV +LYEN+ +D D+ + R+AI+ IM+MP+L +QALALTIRYLKQ
Sbjct: 361 LAEVMTLYENMGED---------DSKQNVEGNQRLAIEVIMDMPDLVVQALALTIRYLKQ 420
Query: 421 FGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI-------------------------- 480
FGLER++ LG+SFRP S EMTL N L QLE+
Sbjct: 421 FGLERVLCLGASFRPLSSNFEMTLPANALQQLEVLRNNSDGSESGSLLQSMNRTITTFGS 480
Query: 481 -------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPELNYI 540
THPLC+R+MI AR +AVSEI +M S++ SQNI + +VI PE++++
Sbjct: 481 RLLRHWVTHPLCDRNMITARLDAVSEIGESMGSSQASQNIEDL------AVVIRPEISHV 540
Query: 541 LSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYA 600
LSSVLTTLGR PDIQRGITRIFHRT P+E + VIQAILYA
Sbjct: 541 LSSVLTTLGRVPDIQRGITRIFHRTTTPTEF-------------------IAVIQAILYA 600
Query: 601 GKQLQQFHIDEEDDNYSSES-----MIGSKLLRKLILSASSSGLISIAAKLLSTISKEAA 660
GKQLQQ H +EE++ + ++ S+LLRKLIL+ASS +I AAKLLS+++ EAA
Sbjct: 601 GKQLQQLHNEEEEEEEEGDGKFRAKIVRSELLRKLILTASSPTVIRNAAKLLSSLNNEAA 660
Query: 661 DQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHL 720
DQ DL NL II+N QFP+VA ARK+ Q A+EKLDSLIT+YRKQL M KLEF SVSG THL
Sbjct: 661 DQRDLQNL-IISNGQFPEVAEARKKVQLAKEKLDSLITLYRKQLKMSKLEFISVSGVTHL 720
Query: 721 IELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFS 780
IEL+LDVKVPSNWVK+NSTKKTIRYHPPEVL ALD+LSLANEEL VA + AW+ FL FS
Sbjct: 721 IELSLDVKVPSNWVKVNSTKKTIRYHPPEVLTALDKLSLANEELNVACQSAWNSFLVEFS 780
Query: 781 RYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQ 840
YYAEFQ+AVQALA++DCL+SLAILSR++NYVRP ++DDEP QI I +GRHPVLES +Q
Sbjct: 781 NYYAEFQAAVQALAALDCLHSLAILSRNENYVRPILLYDDEPVQIHISAGRHPVLESILQ 840
Query: 841 GNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDG 900
NFVPNDT+L + E+CQIVTGPNMGGKSCYIRQVALIA+MAQVGS+VPA SAKLHVLDG
Sbjct: 841 DNFVPNDTDLHADREYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLHVLDG 900
Query: 901 IYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAAL 960
IYTRMGASDSIQQGRSTFLEE++ETS+IL RSLVIIDELGRGTSTHDGVAIAYA L
Sbjct: 901 IYTRMGASDSIQQGRSTFLEELSETSNILKSCKERSLVIIDELGRGTSTHDGVAIAYATL 960
Query: 961 QNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSH--ERPSFSGPKSAQDVIY 1020
+LL K+C+VLFVTHYPK+A+I EFP S G YHVS+LTSH E +S DV Y
Sbjct: 961 HHLLEQKRCMVLFVTHYPKIAEIIAEFPGSVGAYHVSHLTSHRNEETGTMNSESDHDVTY 1020
Query: 1021 LYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASG 1080
LYKLVPG++E SFGFKVA+LAQ+P CI RA M LE +V+ R+ K +MHL E S
Sbjct: 1021 LYKLVPGVSEKSFGFKVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCGKMHLLETSS 1080
Query: 1081 -------KGLELESSECFLEDRIDAYEEFFLFLKATICSPDDMGKHFLQFSQARSMAMDL 1092
LE+ESS+C +D Y+EFFL LK + S DD K +QAR +A +L
Sbjct: 1081 LCQKDEKMTLEMESSKC-----LDGYKEFFLILKNAL-SVDDHAKSLQLLNQARGLANEL 1080
BLAST of CmaCh16G001300 vs. TAIR10
Match:
AT4G25540.1 (AT4G25540.1 homolog of DNA mismatch repair protein MSH3)
HSP 1 Score: 1119.8 bits (2895), Expect = 0.0e+00
Identity = 624/1107 (56.37%), Postives = 771/1107 (69.65%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQPFSPPKISATVTFSPSKR-LISSAL 60
MGKQKQQ ISRFFAPKPKSP+ + + + P PPKISATV+FSPSKR L+S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTP-----PPKISATVSFSPSKRKLLSDHL 60
Query: 61 ASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAPTGG 120
A+ S K+PKLSPHT NP+P +P LH+RFL++FL+P + T
Sbjct: 61 AAA-----SPKKPKLSPHTQNPVP---DPNLHQRFLQRFLEPSPEEYVPE-------TSS 120
Query: 121 DAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASI 180
KYTPLE QVV+LK +YPDV+LMVEVGYRYRFFG+DAEIAARVLGIYAH+D NFMTAS+
Sbjct: 121 SRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASV 180
Query: 181 PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQNL 240
PTFRLN HVRRLV+AGYK+GVVKQTETAAIK+HG+N+ GPF RGLSALYTKATLEA +++
Sbjct: 181 PTFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDI 240
Query: 241 GGA---EEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREYD 300
G EEG G +SN+L CVV++ + + L IE DV++G+V +EISTG+V+Y E++
Sbjct: 241 SGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFN 300
Query: 301 DNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKDGSAL 360
DNFMRSGLEA++LSLSPAELLLG P+S+ TEK L+ +AGP SNVRVE S DCF +G+A+
Sbjct: 301 DNFMRSGLEAVILSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAV 360
Query: 361 AEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQF 420
EV SL E I NL D + A + + + IMNMP+L +QALALT +LKQF
Sbjct: 361 DEVISLCEKISAGNLE-DDKEMKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQF 420
Query: 421 GLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI--------------------------- 480
G ERI+ G+SFR S EMTLS NTL QLE+
Sbjct: 421 GFERILYQGASFRSLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSR 480
Query: 481 ------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPELNYIL 540
THPLC+R++I AR +AVSEI+A M S SQ E EE S+ ++ PE +L
Sbjct: 481 LLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVL 540
Query: 541 SSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAG 600
SSVLT + R+ DIQRGITRIFHRTA +E + V++AIL AG
Sbjct: 541 SSVLTAMSRSSDIQRGITRIFHRTAKATEF-------------------IAVMEAILLAG 600
Query: 601 KQLQQFHIDEEDDNYSSESM-IGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDL 660
KQ+Q+ I ++ + S +S + S LLRKLI SS ++ A KLLS ++KEAA +GDL
Sbjct: 601 KQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRGDL 660
Query: 661 PNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELAL 720
+++I ++DQFP++A AR+ REKLDS I +RK+L +R LEF VSG THLIEL +
Sbjct: 661 LDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPV 720
Query: 721 DVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAE 780
D KVP NWVK+NSTKKTIRYHPPE++A LDEL+LA E L + +R +WD FL FSRYY +
Sbjct: 721 DSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTD 780
Query: 781 FQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVP 840
F++AVQALA++DCL+SL+ LSR+KNYVRPEFV D EP +I I SGRHPVLE+ +Q NFVP
Sbjct: 781 FKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVP 840
Query: 841 NDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRM 900
NDT L GE+CQI+TGPNMGGKSCYIRQVALI++MAQVGS+VPA AKLHVLDG++TRM
Sbjct: 841 NDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRM 900
Query: 901 GASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLH 960
GASDSIQ GRSTFLEE++E SHI+ +SRSLVI+DELGRGTSTHDGVAIAYA LQ+LL
Sbjct: 901 GASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLA 960
Query: 961 HKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLVPG 1020
K+CLVLFVTHYP++A+I+ FP S G YHVSYLT + G DV YLYKLV G
Sbjct: 961 EKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD---KGSYDHDDVTYLYKLVRG 1020
Query: 1021 IAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLELES 1070
+ SFGFKVAQLAQIP CI RA M LE A+ + RE + + +G E
Sbjct: 1021 LCSRSFGFKVAQLAQIPPSCIRRAISMAAKLE------AEVRARERNTRMGEPEGHEEPR 1055
BLAST of CmaCh16G001300 vs. TAIR10
Match:
AT3G18524.1 (AT3G18524.1 MUTS homolog 2)
HSP 1 Score: 191.4 bits (485), Expect = 3.0e-48
Identity = 125/378 (33.07%), Postives = 195/378 (51.59%), Query Frame = 1
Query: 667 EFTSVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASR 726
+F V T E + K+ + ++ + + K +++ ++ D+ ++ +
Sbjct: 513 QFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQK 572
Query: 727 EAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRH--KNYVRPEFVHDDEPAQIVI 786
E D + + + F+ L+ +D L S A L+ Y RPE D IV+
Sbjct: 573 ELVDRVVETVTSFSEVFEDLAGLLSEMDVLLSFADLAASCPTPYCRPEITSSDA-GDIVL 632
Query: 787 CSGRHPVLESTVQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSY 846
RHP +E+ NF+PND L QIVTGPNMGGKS +IRQV +I LMAQVGS+
Sbjct: 633 EGSRHPCVEAQDWVNFIPNDCRLMRGKSWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSF 692
Query: 847 VPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGT 906
VP A + + D I+ R+GA D +G STF++EM ET+ IL ++ +SL+IIDELGRGT
Sbjct: 693 VPCDKASISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGT 752
Query: 907 STHDGVAIAYAALQNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSF 966
ST+DG +A+A ++L+ K+ LF TH+ ++ + + A++ V + ++ S
Sbjct: 753 STYDGFGLAWAICEHLVQVKRAPTLFATHFHELTALAQ---ANSEVSGNTVGVANFHVSA 812
Query: 967 SGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIV------- 1026
++ + LYK+ PG + SFG VA+ A P +A A E LE+
Sbjct: 813 HIDTESRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPSSMIIN 872
Query: 1027 -TRRAQRKTREMHLQEAS 1035
+RK+RE E S
Sbjct: 873 NEESGKRKSREDDPDEVS 886
BLAST of CmaCh16G001300 vs. TAIR10
Match:
AT4G02070.1 (AT4G02070.1 MUTS homolog 6)
HSP 1 Score: 183.0 bits (463), Expect = 1.1e-45
Identity = 172/588 (29.25%), Postives = 268/588 (45.58%), Query Frame = 1
Query: 437 MTLSGNTLTQLEITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIE 496
+T SG L + + PL ++I RQ+AV+ + + S R+S
Sbjct: 729 ITASGKRLLKTWLARPLYNTELIKERQDAVAILRGE--NLPYSLEFRKS----------- 788
Query: 497 PELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVI 556
L R PD++R I R+F S I SG + G KV+
Sbjct: 789 -------------LSRLPDMERLIARMF-----------SSIEASGRN-------GDKVV 848
Query: 557 QAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTIS--- 616
A KQ+Q+F +E+ + + K S L++ L + S
Sbjct: 849 LYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIK 908
Query: 617 --KEAADQGDLPNL--MIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFT 676
K+A D + N +I + + A K + L + RK LG + +
Sbjct: 909 YFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYV 968
Query: 677 SVSGTTHLIEL--ALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRE 736
+V +L+E+ +L VP ++ +S K RY P + L ELS A E A +
Sbjct: 969 TVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKS 1028
Query: 737 AWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFV----HDDEPAQIV 796
+ F + +++ V A A +D L SLA S VR V D +
Sbjct: 1029 ISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFASDSYEGVRCRPVISGSTSDGVPHLS 1088
Query: 797 ICSGRHPVL--ESTVQGNFVPNDTNLDVNGEHCQ---IVTGPNMGGKSCYIRQVALIALM 856
HPVL +S +G+FVPN N+ + G ++TGPNMGGKS +RQV L ++
Sbjct: 1089 ATGLGHPVLRGDSLGRGSFVPN--NVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVIL 1148
Query: 857 AQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIID 916
AQ+G+ VPA + ++ +D I RMGA D I G+STFL E++ET+ +L +T SLV++D
Sbjct: 1149 AQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLD 1208
Query: 917 ELGRGTSTHDGVAIAYAALQNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTS 976
ELGRGT+T DG AIA + L++ + +C F THY +++ + + + H++
Sbjct: 1209 ELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLS-VDYQTNPKVSLCHMACQIG 1263
Query: 977 HERPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLPCIARA 1007
G ++V +LY+L PG S+G VA+LA +P + RA
Sbjct: 1269 ------EGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRA 1263
BLAST of CmaCh16G001300 vs. TAIR10
Match:
AT3G24495.1 (AT3G24495.1 MUTS homolog 7)
HSP 1 Score: 157.5 bits (397), Expect = 4.8e-38
Identity = 85/193 (44.04%), Postives = 121/193 (62.69%), Query Frame = 1
Query: 816 IVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTF 875
++TGPNMGGKS +R L + AQ+G YVP S ++ ++D I+TR+GASD I G STF
Sbjct: 850 LLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCESCEISLVDTIFTRLGASDRIMTGESTF 909
Query: 876 LEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKKCLVLFVTHYP 935
L E TET+ +L ++T SLVI+DELGRGTST DG AIAY+ ++L+ +C +LF THY
Sbjct: 910 LVECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHY- 969
Query: 936 KVADITKEFPASAGVYHVSYLTSHERPSFSGPKSA-QDVIYLYKLVPGIAESSFGFKVAQ 995
+TKEF + V + + S P+ QD+++LY+L G S+G +VA
Sbjct: 970 --HPLTKEFASHPRVTSKHMACAFKSRSDYQPRGCDQDLVFLYRLTEGACPESYGLQVAL 1029
Query: 996 LAQIPLPCIARAT 1008
+A IP + A+
Sbjct: 1030 MAGIPNQVVETAS 1039
BLAST of CmaCh16G001300 vs. TAIR10
Match:
AT4G17380.1 (AT4G17380.1 MUTS-like protein 4)
HSP 1 Score: 150.6 bits (379), Expect = 5.9e-36
Identity = 103/318 (32.39%), Postives = 167/318 (52.52%), Query Frame = 1
Query: 639 ARKEAQSAREKLDSLITIYRKQLGMR--KLEFTSVSGTTHLI-ELALDVKVPSNWVKINS 698
AR+ E + +L + YR++ + KL F + G I + + K+P+ + ++
Sbjct: 371 ARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGKLPNKFTQVVK 430
Query: 699 TKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEFQSAVQALASIDC 758
K I E+ + A E + + + + E SA+ LA + C
Sbjct: 431 HGKNIHCSSLELASLNVRNKSAAGECFIRTETCLEALMDAIR----EDISALTLLAEVLC 490
Query: 759 LYSLAILS-RHK-------NYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVPNDTNL 818
L + + S H Y RPE D P + I +GRHP+LES + +FV N +
Sbjct: 491 LLDMIVNSFAHTISTKPVDRYSRPELT-DSGP--LAIDAGRHPILES-IHNDFVSNSIFM 550
Query: 819 DVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDS 878
+ +V GPNM GKS Y++QV L+ ++AQ+G YVPA A + V+D I+TRMG D+
Sbjct: 551 S-EATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMDN 610
Query: 879 IQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKKCL 938
++ STF+ EM ET+ I+ + T+RSL+++DELGR TS+ DG+A+A++ + LL K
Sbjct: 611 LESNSSTFMTEMRETAFIMQNVTNRSLIVMDELGRATSSSDGLAMAWSCCEYLL-SLKAY 670
Query: 939 VLFVTHYPKVADITKEFP 946
+F TH +A++ +P
Sbjct: 671 TVFATHMDSLAELATIYP 678
BLAST of CmaCh16G001300 vs. NCBI nr
Match:
gi|659077452|ref|XP_008439212.1| (PREDICTED: DNA mismatch repair protein MSH3 [Cucumis melo])
HSP 1 Score: 1751.9 bits (4536), Expect = 0.0e+00
Identity = 930/1130 (82.30%), Postives = 989/1130 (87.52%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSA-----LAPPTQPFSPPKISATVTFSPSKRLI 60
MGKQKQQVISRFFAPKPK PS+SSSSSS+ + PTQPFSP K+SATVTFSPSKRLI
Sbjct: 82 MGKQKQQVISRFFAPKPKFPSLSSSSSSSATAADITLPTQPFSPAKVSATVTFSPSKRLI 141
Query: 61 SSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKA 120
SSA+ASQLTPPKSSKRPKLSPHTHNPLPS+ NP+LH+RFL+KFL+P ++SF+ SNQNP+
Sbjct: 142 SSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKFLEPTDDSFQPSNQNPRT 201
Query: 121 PTGGDAKY--TPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRN 180
GGD KY TPLE QVVDLKKR+PDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLD N
Sbjct: 202 SNGGDPKYKYTPLEQQVVDLKKRFPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDHN 261
Query: 181 FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL 240
FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL
Sbjct: 262 FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL 321
Query: 241 EAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYR 300
EA Q+LGGAEEGC GESNYLFC+VE SMLVDNLD RIE GVDVKIG+VAMEISTGDVIYR
Sbjct: 322 EAAQDLGGAEEGCAGESNYLFCLVENSMLVDNLDCRIENGVDVKIGIVAMEISTGDVIYR 381
Query: 301 EYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKDG 360
EYDDNFMRSGLEAMLLSL+PAELLLGDPISK TEKLLLGYAGPASNVRVE VSRDCFK+G
Sbjct: 382 EYDDNFMRSGLEAMLLSLAPAELLLGDPISKPTEKLLLGYAGPASNVRVERVSRDCFKNG 441
Query: 361 SALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRYL 420
SALAEV SLYENID+DNL D++ P+TVL G+KSD AIKEI+NMPNLALQA ALTIR+L
Sbjct: 442 SALAEVMSLYENIDQDNLTEDNN-PETVLIGQKSDLTAIKEIVNMPNLALQAFALTIRHL 501
Query: 421 KQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLE------------------------- 480
KQFGLER+VSL SSFRPFSCKMEMTLSGNTLTQLE
Sbjct: 502 KQFGLERVVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLHCMNHTLTIF 561
Query: 481 --------ITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPELN 540
ITHPLC+R+MIIARQEAVSEIAA+MVS+KVS N +EEDSDV+VIEPELN
Sbjct: 562 GSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSSNNGVLDEEDSDVIVIEPELN 621
Query: 541 YILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAIL 600
YILSSVLTTLGRAPDIQRGITRIFHRTAAPSE + VIQAIL
Sbjct: 622 YILSSVLTTLGRAPDIQRGITRIFHRTAAPSE-------------------FIAVIQAIL 681
Query: 601 YAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQG 660
+AGKQLQQFHIDEEDDN SSES+IGSKLLRKLILSASSSGLI+IAAKLLSTISKEAADQG
Sbjct: 682 FAGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQG 741
Query: 661 DLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIEL 720
D PNLMII +DQ+PKVARARKEAQSAREKLD+LIT YRKQLGMRKLEFTSVSGTTHLIEL
Sbjct: 742 DFPNLMIIYSDQYPKVARARKEAQSAREKLDALITFYRKQLGMRKLEFTSVSGTTHLIEL 801
Query: 721 ALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYY 780
A+DVKVPS WVKINSTKKT+RYHPPEVLAALDELSLANEELMVASR+AWD FL GFSRYY
Sbjct: 802 AIDVKVPSKWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRDAWDDFLRGFSRYY 861
Query: 781 AEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNF 840
AEFQ+AVQALASIDCLYSLAILSR+KNY RPEFVHDDEPAQI ICSGRHPVLE T+QGNF
Sbjct: 862 AEFQAAVQALASIDCLYSLAILSRNKNYARPEFVHDDEPAQIHICSGRHPVLEGTLQGNF 921
Query: 841 VPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYT 900
VPNDTNLD NGEHCQIVTGPNMGGKSCYIRQVALIALM+QVGS+VPAFSAKLHVLDGIYT
Sbjct: 922 VPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYT 981
Query: 901 RMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNL 960
RMGASDSIQQGRSTFLEEMTETSHIL HS+SRSLVIIDELGRGTSTHDGVAIAYAAL NL
Sbjct: 982 RMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHNL 1041
Query: 961 LHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLV 1020
L KKCLVLFVTHYPKVA+I KEFPA A YHVSYLTSH+ PS SG KS +DV YLYKLV
Sbjct: 1042 LQQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKSTEDVTYLYKLV 1101
Query: 1021 PGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLEL 1080
PG+AESSFGFKVAQLAQIPL CIARATEMG+WLEEIV RRAQ K+RE HL E S KGLE
Sbjct: 1102 PGVAESSFGFKVAQLAQIPLSCIARATEMGIWLEEIVARRAQHKSRE-HLPEISVKGLEW 1161
Query: 1081 ESSECFLEDRIDAYEEFFLFLKATICSPDDMGKHFLQFSQARSMAMDLLG 1091
+S + FLE RID YEEFFLFLKAT+ S D MG Q QAR MAMDLLG
Sbjct: 1162 QSFQSFLE-RIDGYEEFFLFLKATVRSADVMGTWCHQIYQARRMAMDLLG 1189
BLAST of CmaCh16G001300 vs. NCBI nr
Match:
gi|778679553|ref|XP_004140847.2| (PREDICTED: DNA mismatch repair protein MSH3 [Cucumis sativus])
HSP 1 Score: 1743.8 bits (4515), Expect = 0.0e+00
Identity = 929/1131 (82.14%), Postives = 988/1131 (87.36%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALA------PPTQPFSPPKISATVTFSPSKRL 60
MGKQKQQVISRFFAPKPKSPS+SSSSSS+ A PPTQPFSP K+SATVTFSPSKRL
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKRL 60
Query: 61 ISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPK 120
ISSA+ASQLTPPKSSKRPKLSPHTHNPLPS+ NP+LH+RFL+K L+P ++SF+ SNQNP+
Sbjct: 61 ISSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPR 120
Query: 121 APTGGDAKY--TPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDR 180
G D KY TPLE QVVDLKKRYPDVLLMVEVGYRYRFFGQDA IAARVLGIYAHLD
Sbjct: 121 TSNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDH 180
Query: 181 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT
Sbjct: 181 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
Query: 241 LEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIY 300
LEA Q+LGGAEEGC GESNYLFC+VE SM V N+D RIE GVDVKIGMVAMEISTGDVIY
Sbjct: 241 LEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAMEISTGDVIY 300
Query: 301 REYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKD 360
EYDDNFMR+GLEAMLLSLSPAELLLGDPISK TEKLLLGYAGPA NVRVE VS DCFKD
Sbjct: 301 GEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPALNVRVERVSGDCFKD 360
Query: 361 GSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRY 420
GSALAEV SLYENID++N D++ P+ VL G+KS+R AIKEI+NMPNLALQALALTIR+
Sbjct: 361 GSALAEVMSLYENIDQNNFTEDNN-PEKVLVGQKSNRSAIKEIVNMPNLALQALALTIRH 420
Query: 421 LKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLE------------------------ 480
LKQFGLERIVSL SSFRPFSCKMEMTLSGNTLTQLE
Sbjct: 421 LKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLHCMNHTLTI 480
Query: 481 ---------ITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPEL 540
ITHPLC+R+MIIARQEAVSEIAA+MVS+KVS N R +EE SDV+VIEPEL
Sbjct: 481 FGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPEL 540
Query: 541 NYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAI 600
NYILSSVLTTLGRAPDIQRGITRIFHRTAAPSE + VIQAI
Sbjct: 541 NYILSSVLTTLGRAPDIQRGITRIFHRTAAPSE-------------------FIAVIQAI 600
Query: 601 LYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQ 660
L+AGKQLQQFHIDEEDDN SSES+IGSKLLRKLILSASSSGLI+IAAKLLSTISKEAADQ
Sbjct: 601 LFAGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQ 660
Query: 661 GDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIE 720
GD PNLMII +DQFPKVARARKEAQSAREKLD+LIT YRKQLGMRKLEFTSVSGTTHLIE
Sbjct: 661 GDFPNLMIIYSDQFPKVARARKEAQSAREKLDALITFYRKQLGMRKLEFTSVSGTTHLIE 720
Query: 721 LALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRY 780
LA+DVKVPS WVKINSTKKT+RYHPPEVLAALDELSLANEELMVASR+AWD FL GFSRY
Sbjct: 721 LAIDVKVPSQWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRDAWDDFLRGFSRY 780
Query: 781 YAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGN 840
YAEFQ+AVQALASIDCLYSLAILSR+KNY RPEFV DDEPAQI +CSGRHPVLE T+QGN
Sbjct: 781 YAEFQAAVQALASIDCLYSLAILSRNKNYARPEFVPDDEPAQIHLCSGRHPVLEGTLQGN 840
Query: 841 FVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIY 900
FVPNDTNLD NGEHCQIVTGPNMGGKSCYIRQVALIALM+QVGS+VPAFSAKLHVLDGIY
Sbjct: 841 FVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIY 900
Query: 901 TRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQN 960
TRMGASDSIQQGRSTFLEEMTETSHIL HS+SRSLVIIDELGRGTSTHDGVAIAYAAL +
Sbjct: 901 TRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHS 960
Query: 961 LLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKL 1020
LL KKCLVLFVTHYPKVA+I KEFPASAGVYHVSYLTSH+ PS SGPKS +DV YLYKL
Sbjct: 961 LLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKSPSLSGPKSTEDVTYLYKL 1020
Query: 1021 VPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLE 1080
+ G+AESSFGFKVAQLAQIPL CIARATEMGVWLEEIVTRRAQRK+ E HL EAS KGLE
Sbjct: 1021 ISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKSTEQHLAEASVKGLE 1080
Query: 1081 LESSECFLEDRIDAYEEFFLFLKATICSPDDMGKHFLQFSQARSMAMDLLG 1091
+S + FLE RID YEEFFLFLKAT+ S D+G Q QARSMAMDLLG
Sbjct: 1081 WQSFQSFLE-RIDGYEEFFLFLKATVRSA-DVGTWCHQIYQARSMAMDLLG 1109
BLAST of CmaCh16G001300 vs. NCBI nr
Match:
gi|1009122578|ref|XP_015878076.1| (PREDICTED: DNA mismatch repair protein MSH3 [Ziziphus jujuba])
HSP 1 Score: 1341.3 bits (3470), Expect = 0.0e+00
Identity = 737/1152 (63.98%), Postives = 877/1152 (76.13%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPK-----------PKSPSVSSSSSSALAPPTQPFSPPKISATVTFS 60
MGKQKQQVISRFFAPK P++PS SSS S+ P P PPKISATVTFS
Sbjct: 1 MGKQKQQVISRFFAPKTKELPSSSSTTPQNPSSSSSIPSSFQNPPTP--PPKISATVTFS 60
Query: 61 PSKRLISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPI--ENSFE 120
PSKR SS LASQ PK K PKLSPHTHNP+P SNP+LH++FL+K L+P ++
Sbjct: 61 PSKRSFSSHLASQ--SPKPPKLPKLSPHTHNPIPLQSNPSLHQKFLDKLLEPPGPDHPEN 120
Query: 121 SSNQNPKAPTGGDA-KYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGI 180
SS QNPK + + KYTPLE QVVDLK++YPDV+LMVEVGY+YRFFG+DAEIAAR+LGI
Sbjct: 121 SSTQNPKLSSSNPSVKYTPLEQQVVDLKEKYPDVILMVEVGYKYRFFGEDAEIAARILGI 180
Query: 181 YAHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSA 240
YAH+D NFMTAS+PTFRLNVHVRRLV++GYKVGVVKQTETAAIKAHGSN+LGPFCRGLSA
Sbjct: 181 YAHMDHNFMTASVPTFRLNVHVRRLVNSGYKVGVVKQTETAAIKAHGSNRLGPFCRGLSA 240
Query: 241 LYTKATLEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEIS 300
LYTKATLEA ++LGG EEGCG +S+YL CVVEKS+L++N+D +E G DV+IG+VA+EIS
Sbjct: 241 LYTKATLEAAEDLGGGEEGCGEDSSYLVCVVEKSVLMENVDCGVESGFDVRIGIVAVEIS 300
Query: 301 TGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVS 360
TGDV+Y E++DNFMRSGLEA++LSLSPAELLLG+P+SK T+KLLL YAGPAS+VR+E VS
Sbjct: 301 TGDVVYGEFNDNFMRSGLEAIVLSLSPAELLLGEPLSKQTDKLLLAYAGPASHVRLERVS 360
Query: 361 RDCFKDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQAL 420
RDCFKDG ALAEV +LYEN+D+++ + DH ++ R R+AI+ IMNMP+LA+QA+
Sbjct: 361 RDCFKDGGALAEVVTLYENMDEES-SLDHSKQNSEAIDRGDCRLAIEAIMNMPDLAVQAM 420
Query: 421 ALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI----------------- 480
ALTIR+LKQFG ERI+ LG+SFRPFS K+EMTLSGN L QLEI
Sbjct: 421 ALTIRHLKQFGFERIIQLGASFRPFSSKLEMTLSGNALQQLEILKNNSDGSESGSLLQSM 480
Query: 481 ----------------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVM 540
THPLC+R+MI AR AVSEI +M S K SQ+I + D
Sbjct: 481 NHTLTIYGSRLLRHWITHPLCDRNMITARLNAVSEIRESMGSCKASQDIGGLDAGDG--R 540
Query: 541 VIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGL 600
I E NY+LSSVLTTLGR+PDIQRGITRIFHRTA PSE F V
Sbjct: 541 TIHSEFNYVLSSVLTTLGRSPDIQRGITRIFHRTATPSE--------------FVV---- 600
Query: 601 KVIQAILYAGKQLQQFHIDEED-DNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTI 660
VIQ ILYAGKQLQQ HI+EED D + S+LLRKLIL+ASS +I AAKLLST+
Sbjct: 601 -VIQVILYAGKQLQQLHIEEEDGDQNLRVKTVHSELLRKLILAASSFSVIENAAKLLSTL 660
Query: 661 SKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVS 720
+KEAA+QGDL NL+II+N ++P+VARARKE Q +EKLDSLI++YRKQL M KLEF SVS
Sbjct: 661 NKEAAEQGDLSNLIIISNGRYPEVARARKEVQLTKEKLDSLISLYRKQLRMSKLEFMSVS 720
Query: 721 GTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGF 780
GTTHLIE++ DVKVPSNWVK++STKKTIRYHPPEVL ALD+L LANEEL VA R AWD F
Sbjct: 721 GTTHLIEVSCDVKVPSNWVKVSSTKKTIRYHPPEVLTALDQLCLANEELTVACRAAWDSF 780
Query: 781 LSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVL 840
L FS+YY EFQ+AVQALA++DCL+SLAILSR+KNYVRP V+DDEP QI I GRHPVL
Sbjct: 781 LRAFSKYYPEFQAAVQALATLDCLHSLAILSRNKNYVRPVLVYDDEPVQIHIHGGRHPVL 840
Query: 841 ESTVQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKL 900
ES +Q NFVPNDT+L E+CQIVTGPNMGGKSCYIRQVALIA+MAQVGS+VPA SAKL
Sbjct: 841 ESVLQDNFVPNDTDLHAAREYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKL 900
Query: 901 HVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAI 960
HVLDGIYTRMGASDSIQ+GRSTFLEE++E SHIL +ST RSLVI+DELGRGTSTHDGVAI
Sbjct: 901 HVLDGIYTRMGASDSIQRGRSTFLEELSEASHILRNSTERSLVILDELGRGTSTHDGVAI 960
Query: 961 AYAALQNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQ- 1020
AYA L +L+ K+C+VLFVTHYPK+ADIT +FP S G YHVSYLTSH+ KS Q
Sbjct: 961 AYATLHHLIEKKRCMVLFVTHYPKIADITTQFPGSVGAYHVSYLTSHKDEDAVSLKSDQE 1020
Query: 1021 DVIYLYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQ 1080
DV YLY+LVPG+ E SFGFKVA+LAQ+P CI+RA+ M LE +V+ A+ ++ + L
Sbjct: 1021 DVTYLYRLVPGVCERSFGFKVAELAQLPSLCISRASIMAARLEMMVSNEARNRSAKRELV 1080
Query: 1081 EAS---GKGLELESSEC----------FLEDRIDAYEEFFLFLKATICSPDDMGKHFLQF 1090
E + GK + + EC E+ + Y+EFFL LKA + D + QF
Sbjct: 1081 EPTLIYGKEEQEKKKECSNWSSTGGVEISEEINNGYKEFFLNLKAAMADHDHANSY--QF 1124
BLAST of CmaCh16G001300 vs. NCBI nr
Match:
gi|645257106|ref|XP_008234260.1| (PREDICTED: DNA mismatch repair protein MSH3 [Prunus mume])
HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 731/1151 (63.51%), Postives = 867/1151 (75.33%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQ--------PFSPPKISATVTFSPSK 60
MGKQKQQVISRFFAPKPK+ + SSSSSS+ P + P PPKI+ATV FSPSK
Sbjct: 1 MGKQKQQVISRFFAPKPKTTNPSSSSSSSFPPSSSSSANPHHPPTPPPKITATVNFSPSK 60
Query: 61 R-LISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQ 120
R L+SS L S + PK SK KLSPHTHNP+P+ NP+LH++FL+K L+P S
Sbjct: 61 RTLLSSHLTS--SSPKPSKLSKLSPHTHNPIPTAPNPSLHQKFLQKLLEP-----SSDVP 120
Query: 121 NPKAPTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLD 180
P + AK+TPLE QVVDLKKRYPDVLLMVEVGY+YRFFGQDAEIAARVLGIYAH+D
Sbjct: 121 EPSPSSNPPAKFTPLEQQVVDLKKRYPDVLLMVEVGYKYRFFGQDAEIAARVLGIYAHMD 180
Query: 181 RNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKA 240
NF+TAS+PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSN+ GPF RGLSALYTKA
Sbjct: 181 HNFLTASVPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNRSGPFGRGLSALYTKA 240
Query: 241 TLEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVI 300
TLEA +++GG EEGCGG+SNYL CVV+KS+ ++N+D ++ G++VKIG+VA+E+STGDV+
Sbjct: 241 TLEAAEDVGGKEEGCGGDSNYLACVVDKSVALENVDGGVDSGIEVKIGIVAVEVSTGDVV 300
Query: 301 YREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFK 360
Y E++DN MRSGLEA +LSLSPAELL+GDP+SK TEK+LL ++G ASNVRVEHVSRD F
Sbjct: 301 YGEFNDNCMRSGLEAAVLSLSPAELLIGDPLSKQTEKMLLAFSGSASNVRVEHVSRDHFN 360
Query: 361 DGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIR 420
+G A AEV SLYEN+D D+L DH +T + + + R+ + IMNMPNLA+QALALT+R
Sbjct: 361 EGGAFAEVMSLYENMDGDDLT-DHPKINTDVKEQSTIRLGTEGIMNMPNLAVQALALTVR 420
Query: 421 YLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI---------------------- 480
+L+QFGLERI+ LG+SFRP S EMTLS N L QLE+
Sbjct: 421 HLRQFGLERILHLGASFRPLSSSTEMTLSANALQQLEVLKNNADGSESGSLLQSMNQTLT 480
Query: 481 -----------THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPE 540
THPLC+R+MI AR +AVSEIA +M S+K QNI + + EDS V ++PE
Sbjct: 481 IFGSRLLRHWVTHPLCDRNMICARLDAVSEIAESMGSSKAPQNIEQLDAEDSFVTNLKPE 540
Query: 541 LNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQA 600
LNYILSSVL TLGR+ DIQRGITRIFHRT PSE + VIQA
Sbjct: 541 LNYILSSVLITLGRSTDIQRGITRIFHRTGTPSEF-------------------IAVIQA 600
Query: 601 ILYAGKQLQQFHIDEEDDNYSSESMIGSK----LLRKLILSASSSGLISIAAKLLSTISK 660
ILYAGKQLQQ I+EE S E++ G K LLRKLI +ASSS +I AA+LLST++K
Sbjct: 601 ILYAGKQLQQLKIEEEG---SKENLRGKKVRSGLLRKLICTASSSTVIGNAARLLSTLNK 660
Query: 661 EAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGT 720
EAAD+ DL NL II++ QFP+VA AR E Q A+EKLDSLI++YRK LGMRKLEF SVSGT
Sbjct: 661 EAADKQDLANL-IISDGQFPEVAEARMEVQLAKEKLDSLISLYRKLLGMRKLEFISVSGT 720
Query: 721 THLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLS 780
THLIEL LDVKVPSNWVKINSTKKT+RYHPP+VL ALD L+LANE+L +A R AWD FLS
Sbjct: 721 THLIELPLDVKVPSNWVKINSTKKTVRYHPPDVLTALDHLALANEKLTIACRAAWDNFLS 780
Query: 781 GFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLES 840
GF +YYAEFQ+AVQALAS+DCL+SLA+LSR+KNYVRP V+DDEP QI I SGRHPVLE+
Sbjct: 781 GFGKYYAEFQAAVQALASLDCLHSLAVLSRNKNYVRPVIVYDDEPVQIHISSGRHPVLET 840
Query: 841 TVQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHV 900
T+Q NFVPNDT+L + E+CQI+TGPNMGGKSCYIRQVALIA+MAQVGS+VPA SAKLHV
Sbjct: 841 TLQDNFVPNDTDLHADREYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLHV 900
Query: 901 LDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAY 960
LDGI+TRMGASDSI QGRSTFLEE++E SHILH+ T+RSLVIIDELGRGTSTHDGVAIAY
Sbjct: 901 LDGIFTRMGASDSIHQGRSTFLEELSEASHILHNCTARSLVIIDELGRGTSTHDGVAIAY 960
Query: 961 AALQNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSA-QDV 1020
A L NLL KKC+VLFVTHYPK+A I EFP S YHVSYLTS+ G +S +DV
Sbjct: 961 ATLHNLLQQKKCMVLFVTHYPKIAYIRTEFPGSVEAYHVSYLTSNRDMDTVGMQSENEDV 1020
Query: 1021 IYLYKLVPGIAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHL--- 1080
YLYKLVPG++E SFGFKVA+LAQ+P CI +AT M LE +V RA+ + + L
Sbjct: 1021 TYLYKLVPGVSERSFGFKVAELAQLPSSCIRQATVMAARLEAVVNSRARNRHGKNWLLKS 1080
Query: 1081 ----QEASGKGLELESSECFL--------EDRIDAYEEFFLFLKATICSPDDMGKHFLQF 1090
Q+ + LES ECF E AY++FF+ LKA I DD K F
Sbjct: 1081 LVTDQKKEAQDEMLESPECFCVGWSPVLEETNGGAYQKFFINLKAAIIDVDDPVKSFQYL 1120
BLAST of CmaCh16G001300 vs. NCBI nr
Match:
gi|470144922|ref|XP_004308095.1| (PREDICTED: DNA mismatch repair protein MSH3 [Fragaria vesca subsp. vesca])
HSP 1 Score: 1322.8 bits (3422), Expect = 0.0e+00
Identity = 729/1142 (63.84%), Postives = 860/1142 (75.31%), Query Frame = 1
Query: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSA-LAP--PTQPFSPPKISATVTFSPSKRLISS 60
M KQKQQVISRFFAPK K + S SSSA L P P P PPKI+ATV FSPSKRL+SS
Sbjct: 1 MKKQKQQVISRFFAPKSKPQNPSFPSSSAPLNPNDPPPPTPPPKITATVAFSPSKRLLSS 60
Query: 61 ALASQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAPT 120
L S S KRPKLSPHTHNP+P+ NP+LH++FL+K L+P S P+ P
Sbjct: 61 HLTS------SPKRPKLSPHTHNPIPTTPNPSLHQKFLQKLLEP-------STSIPQPPP 120
Query: 121 GGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTA 180
+ K TPLELQVVDLKKRYPDVLLMVEVGY+YRFFG+DAEIAAR LGIYAH+D +F+TA
Sbjct: 121 PSNPKLTPLELQVVDLKKRYPDVLLMVEVGYKYRFFGEDAEIAARNLGIYAHMDHSFLTA 180
Query: 181 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQ 240
S+PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHG+N+ GPF RGLSALYTKATLEA +
Sbjct: 181 SVPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGANRGGPFGRGLSALYTKATLEAAE 240
Query: 241 NLGGAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREYDD 300
+GG EEGCGGES+YL CVV++S V NL+S +V+IG+VA+EISTGDV+Y E+ D
Sbjct: 241 GVGGGEEGCGGESSYLSCVVDESGNVGNLES------EVRIGIVAVEISTGDVVYGEFRD 300
Query: 301 NFMRSGLEAMLLSLSPAELLLGDPISKATEKLLLGYAGPASNVRVEHVSRDCFKDGSALA 360
+FMRSGLEA +LSLSPAELLLG+P+SK TEK+LL +AGPASNVRVE VSRDCFKDG ALA
Sbjct: 301 DFMRSGLEAFVLSLSPAELLLGEPLSKQTEKMLLAFAGPASNVRVERVSRDCFKDGGALA 360
Query: 361 EVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQFG 420
EV SLYEN+D+D L D + ++ + G+ + R+ ++ IM MPNLA+QALALTIR+LKQFG
Sbjct: 361 EVMSLYENMDEDKLG-DQTEINSEVIGKGNHRLGVEGIMKMPNLAVQALALTIRHLKQFG 420
Query: 421 LERIVSLGSSFRPFSCKMEMTLSGNTLTQLEI---------------------------- 480
LER++ LG+SFRPFS +EMTLS N L QLE+
Sbjct: 421 LERVLHLGASFRPFSSNVEMTLSANALQQLEVLKNNNDGSESGSLLQCMNHTLTIHGSRL 480
Query: 481 -----THPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRESEEEDSDVMVIEPELNYILS 540
THPLC+R+MI AR +AVSEIA +M S+K I + EDS V ++ PE NYILS
Sbjct: 481 LRHWVTHPLCDRNMISARLDAVSEIAESMGSSKACPIIEGDDAEDSHVTILRPEFNYILS 540
Query: 541 SVLTTLGRAPDIQRGITRIFHRTAAPSEDDGSDISVSGLSFRFSVTTGLKVIQAILYAGK 600
SVLTTLGR+PDIQRGITRIFHRTA PSE + VIQAIL+AGK
Sbjct: 541 SVLTTLGRSPDIQRGITRIFHRTATPSEF-------------------IAVIQAILHAGK 600
Query: 601 QLQQFHIDEEDDNYS-SESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLP 660
QLQQ IDEE + + S+LLRKLIL+ASSS +I AAKLLST++KEAADQ DL
Sbjct: 601 QLQQLQIDEEGSGKTLGGKAVCSELLRKLILTASSSSIIGNAAKLLSTLNKEAADQQDLQ 660
Query: 661 NLMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELALD 720
NL+ I++ QFP+VA+ARKE Q A EKL+SLI +YRKQLGMRKLEF SVSGTTHLIELA+D
Sbjct: 661 NLITISDGQFPEVAKARKEVQLANEKLNSLIGLYRKQLGMRKLEFMSVSGTTHLIELAVD 720
Query: 721 VKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEF 780
VKVPSNWVKINSTKKT+RYHPP+VL ALD L+LA EEL +A R AWD FLSGFS+YYAEF
Sbjct: 721 VKVPSNWVKINSTKKTVRYHPPDVLTALDHLALAKEELTIACRAAWDSFLSGFSKYYAEF 780
Query: 781 QSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVPN 840
Q+A+QALAS+DCL+SLA+LSR+KNYVRP FV+DDEP QI ICSGRHPVLE+T+Q NFVPN
Sbjct: 781 QAAIQALASLDCLHSLAVLSRNKNYVRPVFVYDDEPVQIHICSGRHPVLETTLQDNFVPN 840
Query: 841 DTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMG 900
DT+L + E+CQI+TGPNMGGKSCYIRQVALIA+MAQVGS+VPA A+LHVLDGIYTRMG
Sbjct: 841 DTDLHADREYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASLARLHVLDGIYTRMG 900
Query: 901 ASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHH 960
ASDSIQQGRSTFLEE++E SHILH+ TSRSLVIIDELGRGTSTHDGVAIAYA L +LL
Sbjct: 901 ASDSIQQGRSTFLEELSEASHILHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHHLLQQ 960
Query: 961 KKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTS-HERPSFSGPKSAQDVIYLYKLVPG 1020
K+C+VLFVTHYPK+A I EFP S G YHVSYLTS +R + +DV YLYKLVPG
Sbjct: 961 KRCMVLFVTHYPKIASIRTEFPGSVGAYHVSYLTSDRDRGTVDMTSENEDVTYLYKLVPG 1020
Query: 1021 IAESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLELES 1080
++E SFGFKVA+LAQ+P CI RAT M LE +V RR + L + + E
Sbjct: 1021 VSERSFGFKVAELAQLPSSCIRRATFMADRLEAVVRRRESDRYGNKSLLRSPTMDQKEEV 1080
Query: 1081 SECFL---------EDRI------DAYEEFFLFLKATICSPDDMGKHFLQFSQARSMAMD 1090
E L E++I Y +FFL LK I S DD+ ++ + ARS+A +
Sbjct: 1081 EEEMLGTTGNAYAGENQIKEDIYGSEYNKFFLNLKTAI-SSDDLTENIRYLNHARSIAQE 1102
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
MSH3_ARATH | 0.0e+00 | 56.37 | DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1 SV=2 | [more] |
MSH3_MOUSE | 7.2e-153 | 36.53 | DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3 | [more] |
MSH3_HUMAN | 2.3e-151 | 37.78 | DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4 | [more] |
MSH3_ASPNC | 7.5e-142 | 34.43 | DNA mismatch repair protein msh3 OS=Aspergillus niger (strain CBS 513.88 / FGSC ... | [more] |
MSH3_NEOFI | 2.2e-141 | 35.04 | DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L5V6_CUCSA | 0.0e+00 | 82.14 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182010 PE=4 SV=1 | [more] |
M5XM20_PRUPE | 0.0e+00 | 62.47 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000560mg PE=3 SV=1 | [more] |
F6HP08_VITVI | 0.0e+00 | 62.15 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0100g01310 PE=4 SV=... | [more] |
A0A061G834_THECC | 0.0e+00 | 61.15 | DNA mismatch repair protein MSH3 isoform 1 OS=Theobroma cacao GN=TCM_015154 PE=4... | [more] |
W9S4U9_9ROSA | 0.0e+00 | 61.33 | DNA mismatch repair protein Msh3 OS=Morus notabilis GN=L484_015774 PE=3 SV=1 | [more] |