MELO3C006816.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTACTTCATCCCTCAGACCCATCATTTGTACCGAATGTTAGTGTTGCAATTTCGTCCTGTTTTGAAAGAAGAGTCTTCACCTTATGTCTTCTTGCTGTTGCTTCTTGTCAATAGCATTCCGATTGAGAAATGATACGGGGACGACCGTCCTGTAAGTATTATCTTTCTCTGAACTTCAGAAACTTGGTTACGACTTGTACTGTCCCACTTGATCCTCCAACTACTTCTAGTTTCTCTTCTGCAAGCGAACATAAAAATTTGTGCTTTTCCTTAGTGGAGCAGCTAATTCGTCGTGGCTTGTTTTTTCAGGCGCAACAAGTGATACAACGAATTGTAACACAATCTTCTTCAATTTCTGAAGCTATTTCGATTGTTAATTTTGCTGCCGAATGGGGTTTGGAGCTTGATTTGGCTACCCATGGTTTGCTTTGCCGGCAACTTGTTTACTCTAAACCACAGTTGTCTGAATTTCTGTACAATAGGAAATTTGTAGTTGGAGGTGCTGAGCCAGATGTGTTACTTTTGGATTCTATGGTAAGCTGCTTTTGTAGGCTAGGAAAATTTGAGGAGGCACTGAGCCATTTTAATCGACTCCTTTCGTTGAATTATGTCCCAAGTAAAGTTTCATTTAATGCGATCTTTCGAGAGCTTTGCGCACAAGAAAGGGTTTTAGAGGCGTTTGACTATTTCGTGAGAGTCAATGGAGCTGGTATTTACTTGGGATGTTGGTGTTTTAATGTCTTGATGGATGGGCTATGCAATCAGGGGTTTATGGGGGAAGCTCTTGAATTGTTTGATATAATGCAAAGCACTAATGGTTATCCTCCTACATTGCATTTGTTTAAGACATTGTTCTATGGCCTTTGTAAGAGTGGATGGTTAGGGGAGGCAGAGTTGTTGATCAGAGAAATGGAGTTTCGAAGTCTATATCCTGACAAGACGATGTACACTTCTTTAATTCATGGATATTGCAGAGATAAGAAAATGAAAATGGCAATGCAAGCGTTGTTTAGAATGGTAAAAATAGGCTGTAAGCCCGATACTTTTACATTAAATTCATTGATCCATGGGTTTGCGAAGCTGGGTCTAGTTGAGAAGGGTTGGTTGGTATATAAGCTTATGGAAGACTGGGGAATCCAGCCTGATGTAGTAACTTTTCACATCATGATCGTTAAGTATTGTCAGGTAGGGAAGGTTGACTCTGCGTTAATGATTTTGAATAGTATGGTCAGCTCCAATTTATCTCCTAGCGTTCATTGTTATACAGTTTTGAGTAGTGCGCTTTACAGGAATGGTAGGTTAGAAGAAGTCAATGGATTGCTTAAAAGTATGTTGGACAATGGAATCATACCTGATCATGTGTTGTTTTTAACACTTATGAAGATGTATCCAAAGGGACATGAACTTCAGCTTGCTTTAAATATTTTAGAGACAATTGTAAAGAATGAGCGTGGGTGTGATCCTTCTGTAATCTTAGCCAGTACAGAGTGGCAAACATCAAGCAATCTGGAGCAAAAAATTGAAATACTTCTGAAAGAAATTTCAAATAGCGACTTGAACCTAGCAGCTGTGGCGTTTAGTATTGTGATTTGTGCTTTATGTGAGACAGAAAATTTTGGTTATGCTTTGGATTACTTGCATGATATGGTAAGCCTAGGATGCAAGCCTCTGCTCTTTACTTATAATTCCTTGATTAGGCGTCTTTGCAAGGAGCGGCTTTTTGAGGATGCCATGTCTCTAATCGATCACATGAAAGACTATAGTTTGTTTCCGAATACCACAACATATTTGATTATCGTAAACGAATACTGTAGGCAGGGTAATGTTACAGCAGCATACTATACTCTAAGGAAAATGAGACAGGGTGGATTGAAACCAAGTGTTGCTATTTATGATTCAATAATCAGGTGTTTAAGTAGGGAAAAGAGAATTTTTGAAGCCGAAGTTGTTTTCAAGATGATGCTTGAGGCTGGTGTGGATCCTGATAAGAAGTTCTATTCGACGATGATTAATGGCTATAGTAAAAATGGAAGGATTCTTGAAGCATGTGAATTGTTTGAGCAAATGGTTGAGAATTCTGTCCCACCAAGCTCTCATATTTATACAGCGCTGATTCGTGGCTTGGTTATGAAAAATATGACTGATAAGGGATGTTTATATCTGGGCAAGATGTTAAGAGATGGGTTTTTACCTAATGTTGTATTGTATTCCTCTCTTATCAACCATTACCTAAAGGTAGGAGAGGTTTAA GTTTTACTTCATCCCTCAGACCCATCATTTGTACCGAATGTTAGTGTTGCAATTTCGTCCTGTTTTGAAAGAAGAGTCTTCACCTTATGTCTTCTTGCTGTTGCTTCTTGTCAATAGCATTCCGATTGAGAAATGATACGGGGACGACCGTCCTGTAAGTATTATCTTTCTCTGAACTTCAGAAACTTGGTTACGACTTGTACTGTCCCACTTGATCCTCCAACTACTTCTAGTTTCTCTTCTGCAAGCGAACATAAAAATTTGTGCTTTTCCTTAGTGGAGCAGCTAATTCGTCGTGGCTTGTTTTTTCAGGCGCAACAAGTGATACAACGAATTGTAACACAATCTTCTTCAATTTCTGAAGCTATTTCGATTGTTAATTTTGCTGCCGAATGGGGTTTGGAGCTTGATTTGGCTACCCATGGTTTGCTTTGCCGGCAACTTGTTTACTCTAAACCACAGTTGTCTGAATTTCTGTACAATAGGAAATTTGTAGTTGGAGGTGCTGAGCCAGATGTGTTACTTTTGGATTCTATGGTAAGCTGCTTTTGTAGGCTAGGAAAATTTGAGGAGGCACTGAGCCATTTTAATCGACTCCTTTCGTTGAATTATGTCCCAAGTAAAGTTTCATTTAATGCGATCTTTCGAGAGCTTTGCGCACAAGAAAGGGTTTTAGAGGCGTTTGACTATTTCGTGAGAGTCAATGGAGCTGGTATTTACTTGGGATGTTGGTGTTTTAATGTCTTGATGGATGGGCTATGCAATCAGGGGTTTATGGGGGAAGCTCTTGAATTGTTTGATATAATGCAAAGCACTAATGGTTATCCTCCTACATTGCATTTGTTTAAGACATTGTTCTATGGCCTTTGTAAGAGTGGATGGTTAGGGGAGGCAGAGTTGTTGATCAGAGAAATGGAGTTTCGAAGTCTATATCCTGACAAGACGATGTACACTTCTTTAATTCATGGATATTGCAGAGATAAGAAAATGAAAATGGCAATGCAAGCGTTGTTTAGAATGGTAAAAATAGGCTGTAAGCCCGATACTTTTACATTAAATTCATTGATCCATGGGTTTGCGAAGCTGGGTCTAGTTGAGAAGGGTTGGTTGGTATATAAGCTTATGGAAGACTGGGGAATCCAGCCTGATGTAGTAACTTTTCACATCATGATCGTTAAGTATTGTCAGGTAGGGAAGGTTGACTCTGCGTTAATGATTTTGAATAGTATGGTCAGCTCCAATTTATCTCCTAGCGTTCATTGTTATACAGTTTTGAGTAGTGCGCTTTACAGGAATGGTAGGTTAGAAGAAGTCAATGGATTGCTTAAAAGTATGTTGGACAATGGAATCATACCTGATCATGTGTTGTTTTTAACACTTATGAAGATGTATCCAAAGGGACATGAACTTCAGCTTGCTTTAAATATTTTAGAGACAATTGTAAAGAATGAGCGTGGGTGTGATCCTTCTGTAATCTTAGCCAGTACAGAGTGGCAAACATCAAGCAATCTGGAGCAAAAAATTGAAATACTTCTGAAAGAAATTTCAAATAGCGACTTGAACCTAGCAGCTGTGGCGTTTAGTATTGTGATTTGTGCTTTATGTGAGACAGAAAATTTTGGTTATGCTTTGGATTACTTGCATGATATGGTAAGCCTAGGATGCAAGCCTCTGCTCTTTACTTATAATTCCTTGATTAGGCGTCTTTGCAAGGAGCGGCTTTTTGAGGATGCCATGTCTCTAATCGATCACATGAAAGACTATAGTTTGTTTCCGAATACCACAACATATTTGATTATCGTAAACGAATACTGTAGGCAGGGTAATGTTACAGCAGCATACTATACTCTAAGGAAAATGAGACAGGGTGGATTGAAACCAAGTGTTGCTATTTATGATTCAATAATCAGGTGTTTAAGTAGGGAAAAGAGAATTTTTGAAGCCGAAGTTGTTTTCAAGATGATGCTTGAGGCTGGTGTGGATCCTGATAAGAAGTTCTATTCGACGATGATTAATGGCTATAGTAAAAATGGAAGGATTCTTGAAGCATGTGAATTGTTTGAGCAAATGGTTGAGAATTCTGTCCCACCAAGCTCTCATATTTATACAGCGCTGATTCGTGGCTTGGTTATGAAAAATATGACTGATAAGGGATGTTTATATCTGGGCAAGATGTTAAGAGATGGGTTTTTACCTAATGTTGTATTGTATTCCTCTCTTATCAACCATTACCTAAAGGTAGGAGAGGTTTAA ATGATACGGGGACGACCGTCCTGTAAGTATTATCTTTCTCTGAACTTCAGAAACTTGGTTACGACTTGTACTGTCCCACTTGATCCTCCAACTACTTCTAGTTTCTCTTCTGCAAGCGAACATAAAAATTTGTGCTTTTCCTTAGTGGAGCAGCTAATTCGTCGTGGCTTGTTTTTTCAGGCGCAACAAGTGATACAACGAATTGTAACACAATCTTCTTCAATTTCTGAAGCTATTTCGATTGTTAATTTTGCTGCCGAATGGGGTTTGGAGCTTGATTTGGCTACCCATGGTTTGCTTTGCCGGCAACTTGTTTACTCTAAACCACAGTTGTCTGAATTTCTGTACAATAGGAAATTTGTAGTTGGAGGTGCTGAGCCAGATGTGTTACTTTTGGATTCTATGGTAAGCTGCTTTTGTAGGCTAGGAAAATTTGAGGAGGCACTGAGCCATTTTAATCGACTCCTTTCGTTGAATTATGTCCCAAGTAAAGTTTCATTTAATGCGATCTTTCGAGAGCTTTGCGCACAAGAAAGGGTTTTAGAGGCGTTTGACTATTTCGTGAGAGTCAATGGAGCTGGTATTTACTTGGGATGTTGGTGTTTTAATGTCTTGATGGATGGGCTATGCAATCAGGGGTTTATGGGGGAAGCTCTTGAATTGTTTGATATAATGCAAAGCACTAATGGTTATCCTCCTACATTGCATTTGTTTAAGACATTGTTCTATGGCCTTTGTAAGAGTGGATGGTTAGGGGAGGCAGAGTTGTTGATCAGAGAAATGGAGTTTCGAAGTCTATATCCTGACAAGACGATGTACACTTCTTTAATTCATGGATATTGCAGAGATAAGAAAATGAAAATGGCAATGCAAGCGTTGTTTAGAATGGTAAAAATAGGCTGTAAGCCCGATACTTTTACATTAAATTCATTGATCCATGGGTTTGCGAAGCTGGGTCTAGTTGAGAAGGGTTGGTTGGTATATAAGCTTATGGAAGACTGGGGAATCCAGCCTGATGTAGTAACTTTTCACATCATGATCGTTAAGTATTGTCAGGTAGGGAAGGTTGACTCTGCGTTAATGATTTTGAATAGTATGGTCAGCTCCAATTTATCTCCTAGCGTTCATTGTTATACAGTTTTGAGTAGTGCGCTTTACAGGAATGGTAGGTTAGAAGAAGTCAATGGATTGCTTAAAAGTATGTTGGACAATGGAATCATACCTGATCATGTGTTGTTTTTAACACTTATGAAGATGTATCCAAAGGGACATGAACTTCAGCTTGCTTTAAATATTTTAGAGACAATTGTAAAGAATGAGCGTGGGTGTGATCCTTCTGTAATCTTAGCCAGTACAGAGTGGCAAACATCAAGCAATCTGGAGCAAAAAATTGAAATACTTCTGAAAGAAATTTCAAATAGCGACTTGAACCTAGCAGCTGTGGCGTTTAGTATTGTGATTTGTGCTTTATGTGAGACAGAAAATTTTGGTTATGCTTTGGATTACTTGCATGATATGGTAAGCCTAGGATGCAAGCCTCTGCTCTTTACTTATAATTCCTTGATTAGGCGTCTTTGCAAGGAGCGGCTTTTTGAGGATGCCATGTCTCTAATCGATCACATGAAAGACTATAGTTTGTTTCCGAATACCACAACATATTTGATTATCGTAAACGAATACTGTAGGCAGGGTAATGTTACAGCAGCATACTATACTCTAAGGAAAATGAGACAGGGTGGATTGAAACCAAGTGTTGCTATTTATGATTCAATAATCAGGTGTTTAAGTAGGGAAAAGAGAATTTTTGAAGCCGAAGTTGTTTTCAAGATGATGCTTGAGGCTGGTGTGGATCCTGATAAGAAGTTCTATTCGACGATGATTAATGGCTATAGTAAAAATGGAAGGATTCTTGAAGCATGTGAATTGTTTGAGCAAATGGTTGAGAATTCTGTCCCACCAAGCTCTCATATTTATACAGCGCTGATTCGTGGCTTGGTTATGAAAAATATGACTGATAAGGGATGTTTATATCTGGGCAAGATGTTAAGAGATGGGTTTTTACCTAATGTTGTATTGTATTCCTCTCTTATCAACCATTACCTAAAGGTAGGAGAGGTTTAA MIRGRPSCKYYLSLNFRNLVTTCTVPLDPPTTSSFSSASEHKNLCFSLVEQLIRRGLFFQAQQVIQRIVTQSSSISEAISIVNFAAEWGLELDLATHGLLCRQLVYSKPQLSEFLYNRKFVVGGAEPDVLLLDSMVSCFCRLGKFEEALSHFNRLLSLNYVPSKVSFNAIFRELCAQERVLEAFDYFVRVNGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLGEAELLIREMEFRSLYPDKTMYTSLIHGYCRDKKMKMAMQALFRMVKIGCKPDTFTLNSLIHGFAKLGLVEKGWLVYKLMEDWGIQPDVVTFHIMIVKYCQVGKVDSALMILNSMVSSNLSPSVHCYTVLSSALYRNGRLEEVNGLLKSMLDNGIIPDHVLFLTLMKMYPKGHELQLALNILETIVKNERGCDPSVILASTEWQTSSNLEQKIEILLKEISNSDLNLAAVAFSIVICALCETENFGYALDYLHDMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYSLFPNTTTYLIIVNEYCRQGNVTAAYYTLRKMRQGGLKPSVAIYDSIIRCLSREKRIFEAEVVFKMMLEAGVDPDKKFYSTMINGYSKNGRILEACELFEQMVENSVPPSSHIYTALIRGLVMKNMTDKGCLYLGKMLRDGFLPNVVLYSSLINHYLKVGEV
BLAST of MELO3C006816.2 vs. NCBI nr
Match: XP_008439096.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g62370 [Cucumis melo] >XP_016899010.1 PREDICTED: pentatricopeptide repeat-containing protein At5g62370 [Cucumis melo]) HSP 1 Score: 576.2 bits (1484), Expect = 1.5e-160 Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0
BLAST of MELO3C006816.2 vs. NCBI nr
Match: XP_022985467.1 (pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita maxima] >XP_022985468.1 pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita maxima]) HSP 1 Score: 424.5 bits (1090), Expect = 7.2e-115 Identity = 417/517 (80.66%), Postives = 440/517 (85.11%), Query Frame = 0
BLAST of MELO3C006816.2 vs. NCBI nr
Match: XP_004148164.2 (PREDICTED: pentatricopeptide repeat-containing protein At5g62370 [Cucumis sativus] >KGN57271.1 hypothetical protein Csa_3G175715 [Cucumis sativus]) HSP 1 Score: 417.5 bits (1072), Expect = 8.8e-113 Identity = 412/517 (79.69%), Postives = 416/517 (80.46%), Query Frame = 0
BLAST of MELO3C006816.2 vs. NCBI nr
Match: XP_023552131.1 (pentatricopeptide repeat-containing protein At5g62370 [Cucurbita pepo subsp. pepo] >XP_023552132.1 pentatricopeptide repeat-containing protein At5g62370 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 417.2 bits (1071), Expect = 1.1e-112 Identity = 413/517 (79.88%), Postives = 436/517 (84.33%), Query Frame = 0
BLAST of MELO3C006816.2 vs. NCBI nr
Match: XP_022922745.1 (pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita moschata] >XP_022922746.1 pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita moschata] >XP_022922747.1 pentatricopeptide repeat-containing protein At5g62370 isoform X1 [Cucurbita moschata]) HSP 1 Score: 412.1 bits (1058), Expect = 3.7e-111 Identity = 413/517 (79.88%), Postives = 434/517 (83.95%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TAIR10
Match: AT5G62370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 157.9 bits (398), Expect = 2.3e-38 Identity = 88/222 (39.64%), Postives = 136/222 (61.26%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TAIR10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 46.2 bits (108), Expect = 9.6e-05 Identity = 24/103 (23.30%), Postives = 48/103 (46.60%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TAIR10
Match: AT4G19191.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 45.1 bits (105), Expect = 2.1e-04 Identity = 34/131 (25.95%), Postives = 63/131 (48.09%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TAIR10
Match: AT2G16880.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 43.1 bits (100), Expect = 8.2e-04 Identity = 30/107 (28.04%), Postives = 50/107 (46.73%), Query Frame = 0
BLAST of MELO3C006816.2 vs. Swiss-Prot
Match: sp|Q9LVA2|PP443_ARATH (Pentatricopeptide repeat-containing protein At5g62370 OS=Arabidopsis thaliana OX=3702 GN=At5g62370 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 4.1e-37 Identity = 88/222 (39.64%), Postives = 136/222 (61.26%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TrEMBL
Match: tr|A0A1S4DTI6|A0A1S4DTI6_CUCME (pentatricopeptide repeat-containing protein At5g62370 OS=Cucumis melo OX=3656 GN=LOC103483987 PE=4 SV=1) HSP 1 Score: 576.2 bits (1484), Expect = 9.8e-161 Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TrEMBL
Match: tr|A0A0A0LB22|A0A0A0LB22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175715 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 5.8e-113 Identity = 412/517 (79.69%), Postives = 416/517 (80.46%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TrEMBL
Match: tr|A0A2I4E8V4|A0A2I4E8V4_9ROSI (pentatricopeptide repeat-containing protein At5g62370 OS=Juglans regia OX=51240 GN=LOC108987388 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 2.0e-57 Identity = 117/239 (48.95%), Postives = 162/239 (67.78%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TrEMBL
Match: tr|A0A061G037|A0A061G037_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_014940 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 9.4e-55 Identity = 114/228 (50.00%), Postives = 158/228 (69.30%), Query Frame = 0
BLAST of MELO3C006816.2 vs. TrEMBL
Match: tr|A0A2P5BU27|A0A2P5BU27_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_308970 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 4.4e-52 Identity = 307/509 (60.31%), Postives = 363/509 (71.32%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |