MELO3C006767.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006767.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Protein SMG9
Location	chr06 : 5808549 .. 5814097 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCCTATAAAAACATCATAGTGCTGATAGGAAAACACAGAGGTGGGAGGTTTTGGGCAATGGCGGGTTCAACCGGCGCTAATTCTTCTTCCAATTCTTCTCCTGCTCCTCCTCCCCCCAAAATCCTCCTAGCAAAGCCTGGTCTCGTCCCCGGCGGACCTATTAGCTCTAAGATTGGACGTGGCCCCGGCGCCGACGACGAAGCAGCTTCCATTCGCTCCCGTCTTCCTTCTCTTGGATCCCTTAATCTTCTCTCCGATTCCTGGGATCTCCACATTGACCGTTTCCTTCCTGTAAATAATCTCTCCCTCCCTCCCTCATTTTTTTCTTCCTTTCCCCTCTTCTTTTCATCGAAATTCGAAACTGTTTAAATAAAATGAATTTATTGCTGGAGTTATTCGTAGTATAAGTTTTGCTGTTAATCAGCTGCAGAAATGGGCGTTTTTTTGTTTGTTCTGTTCTGTTCTGTTTAGATGATAGAGTGGATCAGTTGGTTTACAATCATTTTACCACTTTCCAGTTCAGGAGAATTCTTCTCTCCTGGGTTTTTCTTGCAGTTTTTAATGGGTTTAGGTGGGCAGTATGATTTACATTACTTTTGCTCTTCCTTGCCAGTTTTTGACTGAGAATACGGAGTTCAAGGTGGTGGGGATAATTGGTCCACCGGGAGTTGGTAAGTCGACGATTATGAATGAGATTTATGGCTACGATGGAAGTTCTCCAGGTGAGATATCTTTGATGTTTTTTTTTTTTTTAATTTGTTTGTTATGTTTTATTCACTTCTAGATTTATTTGATCATCTTCTTATGTTTTGTCCTTCTTCCATTTCTCCAAAAATTGTTGGTCTCTCTTGATCGCTTGGCTGTGTTTTCCTATTGGTTTTCTTGTTTCTGAGTTCTTGCCTTCACTTACCCTGGTCATTATATGAACATACGAAGCTCTAGAAAGTTTTTTGAAAGATGATTATGGAGGATTTGGAGCTTATTGTTTGAAGACGTCTCTTTTGCATCTATGTATTGGATATATATCTGGAATAATTTGGAGTTAGTCTCAATCTGAGTCCGATTAATTGCCGTTCTTTTATGGGGGAGGCCCTTCTTTGCTGTCGTCATGTGGGGCAGATGAAAGATTTTGTAGCAAGCATGTTCTTTTTACTATTATTTTCAATCTCTAGTCATTGGAAAATGGAGCAATTTTAAGGGGCGAAAGATTCCTTGATCGGAGAAATAGAGCTTACGACATGCCAACACCTCTTTGTGGGCTTTTAGTTCCACTTCAACCTTTTTCCCTAACTACTTTGAGTGTTTTTTTCCTCAATAAGCCCTTGGTTGTAACTTTTTGATTATAGGCCATCTTTTTTTTACCAGCCTTCTTTTAACTTCCTGCATCAAAATGGAAGTCGTTCTTTTCACTGAAAAAAAATCTTTCAGATCTGATGTTCTTCCTATTATCTTATTCACTTATTAAGGTTACAACCTTCTATGCTTTCATCGCTGATTATTAGTGTAATATCTTTTTCTTGTCATGGACAAAAGATTTATTGTACCCCATTTGTCCTTTTTATTAATATTGGCGCCATCCTTTTGCACGTCCTGCAGGTATGCTACCACCATTTCCAATACTATCTGAAGATGTTAGAGCAATGGCTAGGCATTGTACATTGGGTATTGAGCCCCGAATTTCTTCTGAGAGGATTATACTTCTGGATACCCAGGTGTTTTCCTAGTGAATTTTCTTTTTATTGTTAGTTGAGAACTGGAAATGGTGTGGCCTAATTTTCTTTTTGTACTTCTGGATACTCAGGTGTTTCACTTTCCATTTTAATGTTTCTTTTTGGGTTCTTATTTAAATCTTTTTGTGATCACCTTTATTTTTGTCACCAACAGTAGGAGATCCTTTATCATCTTATGTGTTATATTGTCCCCTTGGTTGGTCTGGCCTGTGTATATTGTTGGCCTTCTTGTCTTTTGGGTTCAAGCTCCTTTCTGTAATTTAATGTGAGGGCTGCTTGTTCTTCGTTTTTCCCTTGTATATCTTTTCCCCCCTTTTTTGAACAAGATACAAAATTTTTCGTTTAAAAAGTGAAGTAAAATATTCAAGGGATACAAGCTCCAAAACGAGTGAATTGTACAAGCTAAATAAGAATATATGGGAAACCGTACTGCCCTTGTATATTCTTTCATCTTTCTCAAATTCTCAATGAAAGTTTGGCTTCTTATAAAAAGGGAAAAAGTTGTGTTATCAAAAAAGGGGGAGAACACAAGTCAAATTATGTATTTTCAGTTTAATATTTATGGTTGTATTACTGTTCAAATCTTGTTCAAATTTTTCTTGAAATTTTCCTTTGTTTCTCTAGAGAATGTATAACAAAGATCCACAAAATAAACTGAAATAGCTGAAGTGAATGAACAATATTCCTTTAGGGGTTGTCTCCTTTTCGTCTTTTTATTGGGTGACAACACACTTTGTCGTCTGAATTCATCATGTGACAGTTGTATAGTATTATATTTTTGTTTTTTACTTACTGTTTTGCATGATAATTTGGTAATTGCAGCCTGTGTTCAGTCCTTCGGTTTTAGCTGAAATTATGAGACCTGATGGTTCGTCCACTGTTTCAGTTATTAATGGAGAATCTCTATCTGCTGAATTGGCTCATGAACTTATGAGTATCCAGGTAATTCCAAAGAGAGACTCTTTTCTATTTGTGCTTCGTAGGGGTTTGGGGGATGAATTGGAATCCGAAGAGAGGTTTAGAGTTTCACTACACGATTATATGAAAACCTTGATTTTGGTGGATTCCTTTTGCTTTGTGGCTTATGGCATCAAAATAGTATCTTATAAATTTCTTCCCATTGCTCTGCAAGGATAATTTTAGCTGGGCATTCTTCTAGCGTCCATTTGCAACATTGTTCTTGTGATATCAGAGGGAGTTCATGATCTAAATATGTGGCATTTGATGTTAACTGTAAGTAGCAACCTTCATCTTAATGATCCCTATGTTTTAACCATATTATGTCATGAATTTTGCTTTGTGTCATTCCTGTATCTTGACACTTATTTCTTCGTTCTTTATTGGCTATTTTGAAATTTGATGCGGTTGCCAATTATTCTCTTTTGCAGGTTGACTTACTTAAACATGGCTTGCCTGACCCATCTTCTCCTATTTCTTCTCATGCACAAAATTCTAATGTAGCATCTGAGAAGGAATACAAAGAAAAAACTTCTACAAGTGAAGAATATTTGGCAACTCCAATCTTTGTTCATGCCAAGTGAGTGTAAACTTTCAAGCTTTTAAGACATTTTTTCAACAAGATACAGAATGTAGTTGATAACTTGCTAAGGATAAGGTCAGTCTCTAAACTAAGAAACTATTACCGATCGCATGAAAGAACTTCCTATAATGCTCAAGCTAGCTAGAGAAACACCATAGACTGCAGACTTCTCGTTCCTGCCAACTCCAAAAAACTGTAAATTATCCTGTCCTCTATAATAACTTTTGATCTCCCAACTCCATCACTAAAATCCTCGGGTTTGTTTTCTGTCATTAAACTTGAAGTAGTAAGTAAAGAAGCTCATAATTTAAGGAGTTTGGTGTACCAAAGCATCTCAGGCGACTTATAGTTTGAGTAACAGAAGAATTAGTTAACAAGCTGAAATAAGATCTACAAGGGAATGCACACCTTCATAACCCAAAAGTTCCAATCCCTCTTAGAAGAATTCTTAATAATTGAATATTTTGCACAAGGAACATAGCAAAAGCAATAACTGATTATATTGGTGGTCTGAGTTTTTCTTTAAATCACGTGCAGAGTGCAAGATCGAGATCTTGTTCCACACAATATCTTGCAACTGAAGAGAGCATTTGCCTACTATTTTAAAACCTCTTCATTTATGGGAGACAAATTTGAAAAAGTCCATAGTGAGCAACTACTCTCCTCTGTGGTTCCTGATACCAGGAATTTAGATGTAGATGGTGAAGATAGAAGGTTGCTTCTCATCCCAAACCGGAACAAGGATGACTCTACCAGAGGTCAATACGAAAGTTTTAAATTAGCTCTATGGAAGCTGAGGGATCAGGTCTGTAGTTCACTTTTACCTTATCTATGAACTACTCATTATATAGGTCTAAATCTCTATTAATTCATCACTTATTATTCGAGTTCTAATTTTTCAAATACCTAATCTTGTAACTTTGCCTTAAAAATCTATTTTGATTATAAGCACCTAATCAGCAAAATGTCTATATGGTTAAACAAATTAGGTTTTGGTTAGACCCTTTACTACTGTGGTAGAAAAGAATCTCCAACATTTCATAACGTGTTCAGGTTCTATCCATGAAGGGTGCCTCATTCCCAAGAACTGTTTCGGAACGTGATTGGTTAAAAAACTCTCTGAAGATATGGGAATCAGTGAAGAGCTCTCCTATTGTAATGGAGTATGCCAGAACGCTTCAATCTTCAGGTATGTTCAGGAGATAGGTGGACGATTGTGTTCTTGTTTGTAGTGTCATAAATAGAAGCCATGGCCCTTAGTATTAGGTTTCCATTCTGCATGTTCTAATTTTTTTTTTTTTTTAAAACAAAATTTTAAATTAGGGGTGTTTGTACCCGTAGACGGGTTGTTCCGTGGGCTAATTAGATATTTTATCTCACTGTTCCTACTAGGATGTAGGAATGATGAAAAACAGAATGAACTTTAACATCAAATTCTCATTAGTAGAGAGGAATTCATCCATTAACAAAACAATATAATTTATAAGTTTGGTTTTCATGCTGACATATATTGACAAAAAGAGAAATAAAGAGAAATAGGAGAATTTTGTTTCTTAACTTATTAACCAAAAAGAGAAGTTGTGTTTAAAGACTAAATAGATGGTCTTTAAATCAATGGTAAACGATGTCAAATCCCAAATGGTTAGTAAGATCTCAATCGCTTGTCTTGGAAAGTGTTCGATACAAAATATGTGAGAGTGAGGCTATCCCCTATGGCTATTGGACGATTATTGATTTGATAGCAAAACAAAGTGATGAGTTTTTCTTTAATTTTCATTTTGTTTTATTACAAATTAGGAAATAGTTGTAATTAAATCGTTGGTTTGTGTATACAGCAGAAGAGAAGGTAAAGTTAACTAAAATAAAATGTAATAAAATCTTTATATAAGTCAACTAACTATATCATTCATTCATTCGTAACTTTAACTTGTAATGGGTGGATTTTGTTTTGTTTAATTTTTGTGACGATTAGGCCGAGGTAATTTAAAAATTATTGAAAAAAATAGAGTAGATGAAGAAAGAAATGACAAAAATAGAGTAGTTAGACAAACAATTGTAAAGAATAGAGTGAATTTTAAATTTATGAAGTCGTACACGACTTCTACAGCACCACTTGGATCATTTGATCAACCAACAGGGAAGGACTGTATGGTTGATTTTAATAATTGTTGTTGTAGTAGTAGTATCAAGATTTTAATATAATCTTGATGTAATAGATGCATCAAGAAGTCTTTAAATGATATGTTCTAAATTTCAATTTCAATTGAATTGAAA

mRNA sequence

AAAAATCCTATAAAAACATCATAGTGCTGATAGGAAAACACAGAGGTGGGAGGTTTTGGGCAATGGCGGGTTCAACCGGCGCTAATTCTTCTTCCAATTCTTCTCCTGCTCCTCCTCCCCCCAAAATCCTCCTAGCAAAGCCTGGTCTCGTCCCCGGCGGACCTATTAGCTCTAAGATTGGACGTGGCCCCGGCGCCGACGACGAAGCAGCTTCCATTCGCTCCCGTCTTCCTTCTCTTGGATCCCTTAATCTTCTCTCCGATTCCTGGGATCTCCACATTGACCGTTTCCTTCCTGTGGGCAGTATGATTTACATTACTTTTGCTCTTCCTTGCCAGTTTTTGACTGAGAATACGGAGTTCAAGGTGGTGGGGATAATTGGTCCACCGGGAGTTGGTAAGTCGACGATTATGAATGAGATTTATGGCTACGATGGAAGTTCTCCAGGTATGCTACCACCATTTCCAATACTATCTGAAGATGTTAGAGCAATGGCTAGGCATTGTACATTGGGTATTGAGCCCCGAATTTCTTCTGAGAGGATTATACTTCTGGATACCCAGCCTGTGTTCAGTCCTTCGGTTTTAGCTGAAATTATGAGACCTGATGGTTCGTCCACTGTTTCAGTTATTAATGGAGAATCTCTATCTGCTGAATTGGCTCATGAACTTATGAGTATCCAGGTTGACTTACTTAAACATGGCTTGCCTGACCCATCTTCTCCTATTTCTTCTCATGCACAAAATTCTAATGTAGCATCTGAGAAGGAATACAAAGAAAAAACTTCTACAAGTGAAGAATATTTGGCAACTCCAATCTTTGTTCATGCCAAAGTGCAAGATCGAGATCTTGTTCCACACAATATCTTGCAACTGAAGAGAGCATTTGCCTACTATTTTAAAACCTCTTCATTTATGGGAGACAAATTTGAAAAAGTCCATAGTGAGCAACTACTCTCCTCTGTGGTTCCTGATACCAGGAATTTAGATGTAGATGGTGAAGATAGAAGGTTGCTTCTCATCCCAAACCGGAACAAGGATGACTCTACCAGAGGTCAATACGAAAGTTTTAAATTAGCTCTATGGAAGCTGAGGGATCAGGTTCTATCCATGAAGGGTGCCTCATTCCCAAGAACTGTTTCGGAACGTGATTGGTTAAAAAACTCTCTGAAGATATGGGAATCAGTGAAGAGCTCTCCTATTGTAATGGAGTATGCCAGAACGCTTCAATCTTCAGGTATGTTCAGGAGATAGGTGGACGATTGTGTTCTTGTTTGTAGTGTCATAAATAGAAGCCATGGCCCTTAGTATTAGGTTTCCATTCTGCATGTTCTAATTTTTTTTTTTTTTTAAAACAAAATTTTAAATTAGGGGTGTTTGTACCCGTAGACGGGTTGTTCCGTGGGCTAATTAGATATTTTATCTCACTGTTCCTACTAGGATGTAGGAATGATGAAAAACAGAATGAACTTTAACATCAAATTCTCATTAGTAGAGAGGAATTCATCCATTAACAAAACAATATAATTTATAAGTTTGGTTTTCATGCTGACATATATTGACAAAAAGAGAAATAAAGAGAAATAGGAGAATTTTGTTTCTTAACTTATTAACCAAAAAGAGAAGTTGTGTTTAAAGACTAAATAGATGGTCTTTAAATCAATGGTAAACGATGTCAAATCCCAAATGGTTAGTAAGATCTCAATCGCTTGTCTTGGAAAGTGTTCGATACAAAATATGTGAGAGTGAGGCTATCCCCTATGGCTATTGGACGATTATTGATTTGATAGCAAAACAAAGTGATGAGTTTTTCTTTAATTTTCATTTTGTTTTATTACAAATTAGGAAATAGTTGTAATTAAATCGTTGGTTTGTGTATACAGCAGAAGAGAAGGTAAAGTTAACTAAAATAAAATGTAATAAAATCTTTATATAAGTCAACTAACTATATCATTCATTCATTCGTAACTTTAACTTGTAATGGGTGGATTTTGTTTTGTTTAATTTTTGTGACGATTAGGCCGAGGTAATTTAAAAATTATTGAAAAAAATAGAGTAGATGAAGAAAGAAATGACAAAAATAGAGTAGTTAGACAAACAATTGTAAAGAATAGAGTGAATTTTAAATTTATGAAGTCGTACACGACTTCTACAGCACCACTTGGATCATTTGATCAACCAACAGGGAAGGACTGTATGGTTGATTTTAATAATTGTTGTTGTAGTAGTAGTATCAAGATTTTAATATAATCTTGATGTAATAGATGCATCAAGAAGTCTTTAAATGATATGTTCTAAATTTCAATTTCAATTGAATTGAAA

Coding sequence (CDS)

ATGGCGGGTTCAACCGGCGCTAATTCTTCTTCCAATTCTTCTCCTGCTCCTCCTCCCCCCAAAATCCTCCTAGCAAAGCCTGGTCTCGTCCCCGGCGGACCTATTAGCTCTAAGATTGGACGTGGCCCCGGCGCCGACGACGAAGCAGCTTCCATTCGCTCCCGTCTTCCTTCTCTTGGATCCCTTAATCTTCTCTCCGATTCCTGGGATCTCCACATTGACCGTTTCCTTCCTGTGGGCAGTATGATTTACATTACTTTTGCTCTTCCTTGCCAGTTTTTGACTGAGAATACGGAGTTCAAGGTGGTGGGGATAATTGGTCCACCGGGAGTTGGTAAGTCGACGATTATGAATGAGATTTATGGCTACGATGGAAGTTCTCCAGGTATGCTACCACCATTTCCAATACTATCTGAAGATGTTAGAGCAATGGCTAGGCATTGTACATTGGGTATTGAGCCCCGAATTTCTTCTGAGAGGATTATACTTCTGGATACCCAGCCTGTGTTCAGTCCTTCGGTTTTAGCTGAAATTATGAGACCTGATGGTTCGTCCACTGTTTCAGTTATTAATGGAGAATCTCTATCTGCTGAATTGGCTCATGAACTTATGAGTATCCAGGTTGACTTACTTAAACATGGCTTGCCTGACCCATCTTCTCCTATTTCTTCTCATGCACAAAATTCTAATGTAGCATCTGAGAAGGAATACAAAGAAAAAACTTCTACAAGTGAAGAATATTTGGCAACTCCAATCTTTGTTCATGCCAAAGTGCAAGATCGAGATCTTGTTCCACACAATATCTTGCAACTGAAGAGAGCATTTGCCTACTATTTTAAAACCTCTTCATTTATGGGAGACAAATTTGAAAAAGTCCATAGTGAGCAACTACTCTCCTCTGTGGTTCCTGATACCAGGAATTTAGATGTAGATGGTGAAGATAGAAGGTTGCTTCTCATCCCAAACCGGAACAAGGATGACTCTACCAGAGGTCAATACGAAAGTTTTAAATTAGCTCTATGGAAGCTGAGGGATCAGGTTCTATCCATGAAGGGTGCCTCATTCCCAAGAACTGTTTCGGAACGTGATTGGTTAAAAAACTCTCTGAAGATATGGGAATCAGTGAAGAGCTCTCCTATTGTAATGGAGTATGCCAGAACGCTTCAATCTTCAGGTATGTTCAGGAGATAG

Protein sequence

MAGSTGANSSSNSSPAPPPPKILLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLGSLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGESLSAELAHELMSIQVDLLKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQSSGMFRR

Homology

[Close]

BLAST of MELO3C006767.2 vs. NCBI nr
Match: XP_008439030.1 (PREDICTED: protein SMG9-like isoform X1 [Cucumis melo])

HSP 1 Score: 696.0 bits (1795), Expect = 7.2e-197
Identity = 382/426 (89.67%), Postives = 382/426 (89.67%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWDLHIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDLHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSSTVSVINGESLSAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTVSVINGESLSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ
Sbjct: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR
Sbjct: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS
Sbjct: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 412

[Close]

BLAST of MELO3C006767.2 vs. NCBI nr
Match: XP_016899123.1 (PREDICTED: protein SMG9-like isoform X2 [Cucumis melo])

HSP 1 Score: 681.0 bits (1756), Expect = 2.4e-192
Identity = 377/426 (88.50%), Postives = 377/426 (88.50%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWDLHIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDLHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSSTVSVINGESLSAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTVSVINGESLSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ
Sbjct: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR
Sbjct: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESFKLALWKLRDQ     GASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS
Sbjct: 361 GQYESFKLALWKLRDQ-----GASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 407

[Close]

BLAST of MELO3C006767.2 vs. NCBI nr
Match: XP_004147641.1 (PREDICTED: protein SMG9-like [Cucumis sativus] >KGN57223.1 hypothetical protein Csa_3G171800 [Cucumis sativus])

HSP 1 Score: 678.3 bits (1749), Expect = 1.5e-191
Identity = 373/426 (87.56%), Postives = 376/426 (88.26%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPI+SKIGRG GADDE ASIRSRLPSLG
Sbjct: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPINSKIGRGAGADDEPASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWDLHIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDLHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSSTVSVINGES SAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTVSVINGESPSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEY+ATPIFVHAKVQDRDLVP NILQ
Sbjct: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYMATPIFVHAKVQDRDLVPQNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR
Sbjct: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESF LALWKLRDQVLSM GASFPRTVSERDWLKNS+KIWESVKSSPIVMEYARTLQS
Sbjct: 361 GQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQS 412

[Close]

BLAST of MELO3C006767.2 vs. NCBI nr
Match: XP_022935704.1 (protein SMG9-like [Cucurbita moschata])

HSP 1 Score: 618.6 bits (1594), Expect = 1.5e-173
Identity = 345/426 (80.99%), Postives = 356/426 (83.57%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTG  XXXXXXXXXXXXXX  AKPGLV GG ISSKIGRG GADDE+ASIRSRLPSLG
Sbjct: 1   MAGSTGXXXXXXXXXXXXXXXXXXAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWD HIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDFHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YG+DGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGFDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSST+SVI+GESLSAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTISVISGESLSAELAHELMSIQLGILLASICNIVLVISEGAHDLNMWRLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSS + SH QNSNV SEKE+K+K S SEEY+ATPIFVHAKV+D DLVPHNILQ
Sbjct: 241 LKHGLPDPSSSVFSHTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFA +FKTSSFMGD   KV SEQLLSSVVPDTRNLDVDGEDRRLL IPNRNKDDSTR
Sbjct: 301 LKRAFAQFFKTSSFMGD---KVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESF LALWKLRDQVLSM G SF RTVSERDWLKNS+KIWE VKSSPIVMEYARTLQS
Sbjct: 361 GQYESFNLALWKLRDQVLSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQS 409

[Close]

BLAST of MELO3C006767.2 vs. NCBI nr
Match: XP_023540786.1 (protein SMG9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173
Identity = 345/428 (80.61%), Postives = 357/428 (83.41%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTG  XXXXXXXXXXXXXX  AKPGLV GG ISSKIGRG GADDE+ASIRSRLPSLG
Sbjct: 1   MAGSTGXXXXXXXXXXXXXXXXXXAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWD HIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDFHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YG+DGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGFDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSST+SVI+GESLSAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTISVISGESLSAELAHELMSIQLGILLASICNIVLVISEGAHDLNMWRLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSS + SH QNSNV SEKE+K+K S SEEY+ATPIFVHAKV+D DLVPHNILQ
Sbjct: 241 LKHGLPDPSSSVFSHTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKF--EKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDS 360
           LKRAFA  FKT+SFMGDK   +KV SEQLLSSVVPDTRNLDVDGEDRRLL IPNRNKDDS
Sbjct: 301 LKRAFAQCFKTASFMGDKVKSDKVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDS 360

Query: 361 TRGQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTL 397
           TRGQYESF LALWKLRDQVLSM G SF RTVSERDWLKNS+KIWE VKSSPIVMEYARTL
Sbjct: 361 TRGQYESFNLALWKLRDQVLSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTL 414

[Close]

BLAST of MELO3C006767.2 vs. Swiss-Prot
Match: sp|B5DDX6|SMG9_XENTR (Protein SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.1e-18
Identity = 110/406 (27.09%), Postives = 176/406 (43.35%), Query Frame = 0


Query: 26  KPGLVPGGPISSKIGRGPGADDEAASIRSRL-PSLGSLNLLSDSWDLHIDRFLPVGSMIY 85
           K G  P  P+     RG GA   AAS    + P +G   LL      H  + +    M +
Sbjct: 124 KEGQRPTQPVYQIQNRGMGA---AASASGNVDPVVGQAKLLPPQKMKHSIKLVD-EYMNW 183

Query: 86  ITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAM 145
              A+  +FL + T+  VVGI+G  G GKST+M+ +             F + S++VR  
Sbjct: 184 CDSAI--EFLLDQTDVLVVGILGLQGTGKSTLMSLLSANSPDDDQRSYVFRMQSQEVRER 243

Query: 146 ARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR------PDGSSTVSVINGESLSA- 205
           A + T GI+  IS ERII LDTQP+ SP++L  ++       P+ +   + +  +SL   
Sbjct: 244 AGNQTSGIDFFISQERIIFLDTQPILSPAILDHLINNDRKLPPEYNLPHTYVEMQSLQIA 303

Query: 206 ----ELAHELMSIQ--------------VDLLKHGLPDPSSPISSHAQNSNVASEKEYKE 265
                + H ++ +Q               ++LK     PS+P  SH  + +  S++    
Sbjct: 304 AFLFTVCHVVIVVQDWFTDFNLYRFLQTAEMLK-----PSTPSPSHESSGSSGSDE---- 363

Query: 266 KTSTSEEYLATPIFVHAKVQDRDLVPHNILQLK--------RAFAYYFKTSS------FM 325
                 EY    +FV  K +  D  P  + Q+          +   Y  T S      F 
Sbjct: 364 ----GIEYYPHVVFVQNKAKREDYCPRTLKQMHTVIDKLMLHSHLRYKGTLSMLDCNIFP 423

Query: 326 GDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLL--IPNRNKDDSTRGQYESFKLALWKL 385
           G  ++ + SE  L  +   T   DVD    R     IP  +   + +G + SF   + +L
Sbjct: 424 GLPYDFIESEVNLFLI--PTMESDVDETISRAGTSGIPLFSLLPAYKG-HPSFHSLISRL 483

Query: 386 RDQVLSMKGASFPRTV-SERDWLKNSLKIWESVKSSPIVMEYARTL 389
           R Q++SM       T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 484 RSQIMSMSRPQLSHTILTEKNWFHYAARIWDGVKKSSALSEYSRLL 507

[Close]

BLAST of MELO3C006767.2 vs. Swiss-Prot
Match: sp|Q05AW9|SMG9_XENLA (Protein SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.4e-17
Identity = 105/403 (26.05%), Postives = 171/403 (42.43%), Query Frame = 0


Query: 26  KPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLGSLNLLSDSWDLHIDRFLPVGSMIYI 85
           K G  P  P+     RG GA   A    S  P +G   LL      H  + +    M + 
Sbjct: 124 KEGQRPTQPVYQIQNRGMGAAASAGG--SVDPVVGQAKLLPPQKMKHSIKLVD-EYMNWC 183

Query: 86  TFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAMA 145
             A+  +FL + T+  VVG++G  G GKST+M+ +             F + S++VR  A
Sbjct: 184 DSAI--EFLLDQTDVLVVGVLGLQGTGKSTLMSLLSANSPDDDQRSYVFRMQSQEVRERA 243

Query: 146 RHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR------PDGSSTVSVINGESLSA-- 205
            + T GI+  IS ERII LDTQP+ SP++L  ++       P+ +   + +  +SL    
Sbjct: 244 GNQTSGIDFFISQERIIFLDTQPILSPAILDHLINNDRKLPPEYNLPHTYVEMQSLQIAA 303

Query: 206 ---ELAHELMSIQ--------------VDLLKHGLPDPSSPISSHAQNSNVASEKEYKEK 265
               + H ++ +Q               ++LK     PS+P  SH  + +  S++     
Sbjct: 304 FLFTVCHVVIVVQDWFTDFNLYRFLQTAEMLK-----PSTPSPSHESSGSSGSDE----- 363

Query: 266 TSTSEEYLATPIFVHAKVQDRDLVPHNILQLK--------RAFAYYFKTSS------FMG 325
                EY    +FV  K +  D  P  + Q+          +   Y  T S      F G
Sbjct: 364 ---GIEYYPHIVFVQNKSKREDFCPRTLKQMHTVMDKLMLHSHLRYKGTLSMLDCNIFPG 423

Query: 326 DKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFKLALWKLRDQ 385
             ++ V SE  L  +     + D          IP  +   + +G + SF   + +LR Q
Sbjct: 424 LPYDFVESEVNLFLIPTMESDADETISRAGTSGIPLFSLLPAYKG-HPSFHSLVSRLRSQ 483

Query: 386 VLSMKGASFPRTV-SERDWLKNSLKIWESVKSSPIVMEYARTL 389
           ++SM       T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 484 IMSMSRPQLSHTILTEKNWFHYAARIWDGVKKSSALSEYSRLL 507

[Close]

BLAST of MELO3C006767.2 vs. Swiss-Prot
Match: sp|Q9DB90|SMG9_MOUSE (Protein SMG9 OS=Mus musculus OX=10090 GN=Smg9 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.5e-16
Identity = 96/403 (23.82%), Postives = 166/403 (41.19%), Query Frame = 0


Query: 26  KPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLGSLNLLSDSWDLHIDRFLPVGSMIYI 85
           K G  P  P+     RG G     A+  +  P +G   LL      H  + +    M + 
Sbjct: 137 KEGQRPTQPVYQIQNRGMG----TAAPTAMDPVVGQAKLLPPERMKHSIKLVD-DQMNWC 196

Query: 86  TFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAMA 145
             A+  ++L + T+  VVG++G  G GKS +M+ +             F   S +++   
Sbjct: 197 DSAI--EYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRAQSAEMKERG 256

Query: 146 RHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR------PDGSSTVSVINGESLSA-- 205
            + T GI+  I+ ERI+ LDTQP+ SPS+L  ++       P+ +   + +  +SL    
Sbjct: 257 GNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAA 316

Query: 206 ---ELAHELMSIQ---VDLLKH------GLPDPSSPISSHAQNSNVASEKEYKEKTSTSE 265
               + H ++ +Q    DL  +       +  PS+P  SH  +S+  S++          
Sbjct: 317 FLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSAGSDE--------GT 376

Query: 266 EYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDT 325
           EY    +F+  K +  D  P  + Q+          S         +    +   + PD 
Sbjct: 377 EYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPDF 436

Query: 326 RNLDVDGEDRRLLLIP-------NRNKDDSTRGQ------------YESFKLALWKLRDQ 385
            + +V+     L L+P       N N   +  G             + SF+  + KLR Q
Sbjct: 437 LDAEVN-----LFLVPFMDSEAENENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQ 496

Query: 386 VLSMKGASFPRTV-SERDWLKNSLKIWESVKSSPIVMEYARTL 389
           V+SM       T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 497 VMSMARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLL 519

[Close]

BLAST of MELO3C006767.2 vs. Swiss-Prot
Match: sp|Q2YDD2|SMG9_BOVIN (Protein SMG9 OS=Bos taurus OX=9913 GN=SMG9 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15
Identity = 97/404 (24.01%), Postives = 166/404 (41.09%), Query Frame = 0


Query: 26  KPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLGSLNLLSDSWDLHIDRFLPVGSMIYI 85
           K G  P  P+     RG G    AA      P +G   LL      H  + +    M + 
Sbjct: 137 KEGQRPTQPVYQIQNRGMGTAAPAAMD----PVVGQAKLLPPERMKHSIKLVD-DQMNWC 196

Query: 86  TFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAMA 145
             A+  ++L + T+  VVG++G  G GKS +M+ +             F   S +++   
Sbjct: 197 DSAI--EYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRAQSAEMKERG 256

Query: 146 RHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR------PDGSSTVSVINGESLSA-- 205
            + T GI+  I+ ERI+ LDTQP+ SPS+L  ++       P+ +   + +  +SL    
Sbjct: 257 GNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAA 316

Query: 206 ---ELAHELMSIQ---VDLLKH------GLPDPSSPISSHAQNSNVASEKEYKEKTSTSE 265
               + H ++ +Q    DL  +       +  PS+P  SH  +S+  SE+          
Sbjct: 317 FLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSEE--------GA 376

Query: 266 EYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDT 325
           EY    +F+  K +  D  P  + Q+          S         +    +   + PD 
Sbjct: 377 EYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPDF 436

Query: 326 RNLDVDGEDRRLLLIPNRNKDDST--------------------RGQYESFKLALWKLRD 385
            + +V+     L L+P  + +  +                    RG + SF+  + KLR 
Sbjct: 437 LDSEVN-----LFLMPFMDSETESETPPRAGPGSSPLFSLLPGYRG-HPSFQSLVSKLRS 496

Query: 386 QVLSMKGASFPRTV-SERDWLKNSLKIWESVKSSPIVMEYARTL 389
           QV+SM       T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 497 QVMSMARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLL 519

[Close]

BLAST of MELO3C006767.2 vs. Swiss-Prot
Match: sp|Q5PQS6|SMG9_RAT (Protein SMG9 OS=Rattus norvegicus OX=10116 GN=Smg9 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15
Identity = 96/403 (23.82%), Postives = 165/403 (40.94%), Query Frame = 0


Query: 26  KPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLGSLNLLSDSWDLHIDRFLPVGSMIYI 85
           K G  P  P+     RG G     A+  +  P +G   LL      H  + +    M + 
Sbjct: 137 KEGQRPTQPVYQIQNRGMG----TAAPTAMDPVVGQAKLLPPERMKHSIKLVD-DQMNWC 196

Query: 86  TFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYDGSSPGMLPPFPILSEDVRAMA 145
             A+  ++L + T+  VVG++G  G GKS +M+ +             F   S +++   
Sbjct: 197 DSAI--EYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRAQSAEMKERG 256

Query: 146 RHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR------PDGSSTVSVINGESLSA-- 205
            + T GI+  I+ ERI+ LDTQP+ SPS+L  ++       P+ +   + +  +SL    
Sbjct: 257 GNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAA 316

Query: 206 ---ELAHELMSIQ---VDLLKH------GLPDPSSPISSHAQNSNVASEKEYKEKTSTSE 265
               + H ++ +Q    DL  +       +  PS+P  SH  +S   S++          
Sbjct: 317 FLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSAAGSDE--------GT 376

Query: 266 EYLATPIFVHAKVQDRDLVPHNILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDT 325
           EY    +F+  K +  D  P  + Q+          S         +    +   + PD 
Sbjct: 377 EYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNIFPGLPPDF 436

Query: 326 RNLDVDGEDRRLLLIP-------NRNKDDSTRGQ------------YESFKLALWKLRDQ 385
            + +V+     L L+P       N N   +  G             + SF+  + KLR Q
Sbjct: 437 LDAEVN-----LFLVPFMDSEAENENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQ 496

Query: 386 VLSMKGASFPRTV-SERDWLKNSLKIWESVKSSPIVMEYARTL 389
           V+SM       T+ +E++W   + +IW+ VK S  + EY+R L
Sbjct: 497 VMSMARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLL 519

[Close]

BLAST of MELO3C006767.2 vs. TrEMBL
Match: tr|A0A1S3AYF2|A0A1S3AYF2_CUCME (protein SMG9-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483940 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 4.7e-197
Identity = 382/426 (89.67%), Postives = 382/426 (89.67%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWDLHIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDLHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSSTVSVINGESLSAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTVSVINGESLSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ
Sbjct: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR
Sbjct: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS
Sbjct: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 412

[Close]

BLAST of MELO3C006767.2 vs. TrEMBL
Match: tr|A0A1S4DT40|A0A1S4DT40_CUCME (protein SMG9-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483940 PE=4 SV=1)

HSP 1 Score: 681.0 bits (1756), Expect = 1.6e-192
Identity = 377/426 (88.50%), Postives = 377/426 (88.50%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG
Sbjct: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWDLHIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDLHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSSTVSVINGESLSAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTVSVINGESLSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ
Sbjct: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR
Sbjct: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESFKLALWKLRDQ     GASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS
Sbjct: 361 GQYESFKLALWKLRDQ-----GASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 407

[Close]

BLAST of MELO3C006767.2 vs. TrEMBL
Match: tr|A0A0A0L618|A0A0A0L618_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171800 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.0e-191
Identity = 373/426 (87.56%), Postives = 376/426 (88.26%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPI+SKIGRG GADDE ASIRSRLPSLG
Sbjct: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPINSKIGRGAGADDEPASIRSRLPSLG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWDLHIDRFLP              FLTENTEFKVVGIIGPPGVGKSTIMNEI
Sbjct: 61  SLNLLSDSWDLHIDRFLP--------------FLTENTEFKVVGIIGPPGVGKSTIMNEI 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR
Sbjct: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ------------------------------VDL 240
           PDGSSTVSVINGES SAELAHELMSIQ                              VDL
Sbjct: 181 PDGSSTVSVINGESPSAELAHELMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDL 240

Query: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQ 300
           LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEY+ATPIFVHAKVQDRDLVP NILQ
Sbjct: 241 LKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYMATPIFVHAKVQDRDLVPQNILQ 300

Query: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360
           LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR
Sbjct: 301 LKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTR 360

Query: 361 GQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQS 397
           GQYESF LALWKLRDQVLSM GASFPRTVSERDWLKNS+KIWESVKSSPIVMEYARTLQS
Sbjct: 361 GQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQS 412

[Close]

BLAST of MELO3C006767.2 vs. TrEMBL
Match: tr|A0A2I4EH91|A0A2I4EH91_9ROSI (protein SMG9-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108989565 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 2.7e-136
Identity = 271/425 (63.76%), Postives = 310/425 (72.94%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTG  XXXXXXXXXXXX  LLAKPGLV GGP++ K GRG  ADDE AS+RSRLP +G
Sbjct: 1   MAGSTGGTXXXXXXXXXXXXKILLAKPGLVTGGPVAGKFGRGGSADDETASLRSRLPPIG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWD HIDRFLP              FLTENT+F VVG+IGP GVGKSTIMNE+
Sbjct: 61  SLNLLSDSWDFHIDRFLP--------------FLTENTDFTVVGVIGPTGVGKSTIMNEL 120

Query: 121 YGYDGSSPGMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMR 180
           YG+D SSPGMLPPF I SED+RAMA+HCT+GIEPRIS+ERIILLDTQP+FSPSVLAEIMR
Sbjct: 121 YGFDASSPGMLPPFAIQSEDIRAMAKHCTMGIEPRISAERIILLDTQPLFSPSVLAEIMR 180

Query: 181 PDGSSTVSVINGESLSAELAHELMSIQ-----------------------------VDLL 240
           PDGSST+SV++GESLSAELAHELMSIQ                             VDLL
Sbjct: 181 PDGSSTISVLSGESLSAELAHELMSIQLGVLLASICHILLVVSEGAHDNMWRLISTVDLL 240

Query: 241 KHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPHNILQL 300
           KHG+PDPSS   SH Q+SN+  EKE K+K + SEEY+A PIFVH K  D D  P N  Q+
Sbjct: 241 KHGIPDPSSIFPSHTQSSNMGPEKENKDKVTKSEEYMAVPIFVHTKFHDEDFSPRNFFQM 300

Query: 301 KRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRG 360
           +++ ++YF TSSF+ DK   +  +Q LSS     +  D D     L +IP + KDDS R 
Sbjct: 301 RKSISHYFSTSSFIRDKTGGITKDQPLSSAASGIQRNDPDSLWPDLFVIPRKKKDDSPRD 360

Query: 361 QYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYARTLQSS 397
           QYES+  ALWKLRDQV+SM G SF RTVSERDWLKNS KIWE VK+SPI+ EY RTLQSS
Sbjct: 361 QYESYISALWKLRDQVISMNGPSFARTVSERDWLKNSAKIWELVKNSPIIAEYCRTLQSS 411

[Close]

BLAST of MELO3C006767.2 vs. TrEMBL
Match: tr|A0A2I4EH73|A0A2I4EH73_9ROSI (protein SMG9-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108989565 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 2.0e-134
Identity = 271/430 (63.02%), Postives = 310/430 (72.09%), Query Frame = 0


Query: 1   MAGSTGANXXXXXXXXXXXXXXLLAKPGLVPGGPISSKIGRGPGADDEAASIRSRLPSLG 60
           MAGSTG  XXXXXXXXXXXX  LLAKPGLV GGP++ K GRG  ADDE AS+RSRLP +G
Sbjct: 1   MAGSTGGTXXXXXXXXXXXXKILLAKPGLVTGGPVAGKFGRGGSADDETASLRSRLPPIG 60

Query: 61  SLNLLSDSWDLHIDRFLPVGSMIYITFALPCQFLTENTEFKVVGIIGPPGVGKSTIMNEI 120
           SLNLLSDSWD HIDRFLP              FLTENT+F VVG+IGP GVGKSTIMNE+
Sbjct: 61  SLNLLSDSWDFHIDRFLP--------------FLTENTDFTVVGVIGPTGVGKSTIMNEL 120

Query: 121 YGYDGSSP-----GMLPPFPILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVL 180
           YG+D SSP     GMLPPF I SED+RAMA+HCT+GIEPRIS+ERIILLDTQP+FSPSVL
Sbjct: 121 YGFDASSPVHWLSGMLPPFAIQSEDIRAMAKHCTMGIEPRISAERIILLDTQPLFSPSVL 180

Query: 181 AEIMRPDGSSTVSVINGESLSAELAHELMSIQ---------------------------- 240
           AEIMRPDGSST+SV++GESLSAELAHELMSIQ                            
Sbjct: 181 AEIMRPDGSSTISVLSGESLSAELAHELMSIQLGVLLASICHILLVVSEGAHDNMWRLIS 240

Query: 241 -VDLLKHGLPDPSSPISSHAQNSNVASEKEYKEKTSTSEEYLATPIFVHAKVQDRDLVPH 300
            VDLLKHG+PDPSS   SH Q+SN+  EKE K+K + SEEY+A PIFVH K  D D  P 
Sbjct: 241 TVDLLKHGIPDPSSIFPSHTQSSNMGPEKENKDKVTKSEEYMAVPIFVHTKFHDEDFSPR 300

Query: 301 NILQLKRAFAYYFKTSSFMGDKFEKVHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKD 360
           N  Q++++ ++YF TSSF+ DK   +  +Q LSS     +  D D     L +IP + KD
Sbjct: 301 NFFQMRKSISHYFSTSSFIRDKTGGITKDQPLSSAASGIQRNDPDSLWPDLFVIPRKKKD 360

Query: 361 DSTRGQYESFKLALWKLRDQVLSMKGASFPRTVSERDWLKNSLKIWESVKSSPIVMEYAR 397
           DS R QYES+  ALWKLRDQV+SM G SF RTVSERDWLKNS KIWE VK+SPI+ EY R
Sbjct: 361 DSPRDQYESYISALWKLRDQVISMNGPSFARTVSERDWLKNSAKIWELVKNSPIIAEYCR 416

The following BLAST results are available for this feature:

BLAST of MELO3C006767.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439030.1	7.2e-197	89.67	PREDICTED: protein SMG9-like isoform X1 [Cucumis melo]	[more]
XP_016899123.1	2.4e-192	88.50	PREDICTED: protein SMG9-like isoform X2 [Cucumis melo]	[more]
XP_004147641.1	1.5e-191	87.56	PREDICTED: protein SMG9-like [Cucumis sativus] >KGN57223.1 hypothetical protein ...	[more]
XP_022935704.1	1.5e-173	80.99	protein SMG9-like [Cucurbita moschata]	[more]
XP_023540786.1	1.9e-173	80.61	protein SMG9-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C006767.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C006767.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B5DDX6\|SMG9_XENTR	4.1e-18	27.09	Protein SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1	[more]
sp\|Q05AW9\|SMG9_XENLA	3.4e-17	26.05	Protein SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1	[more]
sp\|Q9DB90\|SMG9_MOUSE	6.5e-16	23.82	Protein SMG9 OS=Mus musculus OX=10090 GN=Smg9 PE=1 SV=1	[more]
sp\|Q2YDD2\|SMG9_BOVIN	1.1e-15	24.01	Protein SMG9 OS=Bos taurus OX=9913 GN=SMG9 PE=2 SV=1	[more]
sp\|Q5PQS6\|SMG9_RAT	1.1e-15	23.82	Protein SMG9 OS=Rattus norvegicus OX=10116 GN=Smg9 PE=1 SV=1	[more]

BLAST of MELO3C006767.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYF2\|A0A1S3AYF2_CUCME	4.7e-197	89.67	protein SMG9-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483940 PE=4 SV=1	[more]
tr\|A0A1S4DT40\|A0A1S4DT40_CUCME	1.6e-192	88.50	protein SMG9-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483940 PE=4 SV=1	[more]
tr\|A0A0A0L618\|A0A0A0L618_CUCSA	1.0e-191	87.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171800 PE=4 SV=1	[more]
tr\|A0A2I4EH91\|A0A2I4EH91_9ROSI	2.7e-136	63.76	protein SMG9-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108989565 PE=4 SV=1	[more]
tr\|A0A2I4EH73\|A0A2I4EH73_9ROSI	2.0e-134	63.02	protein SMG9-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108989565 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR039177	SMG9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006767.2.1	MELO3C006767.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
IPR039177	Protein SMG9	PANTHER	PTHR14270	UNCHARACTERIZED	coord: 61..208 coord: 208..392
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 102..167 coord: 262..365

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006767.2	Csa3G171800	Cucumber (Chinese Long) v2	cumedB223
MELO3C006767.2	CSPI03G15520	Wild cucumber (PI 183967)	cpimedB224
MELO3C006767.2	Cucsa.252030	Cucumber (Gy14) v1	cgymedB432
MELO3C006767.2	CmaCh06G015970	Cucurbita maxima (Rimu)	cmamedB863
MELO3C006767.2	CmoCh06G015920	Cucurbita moschata (Rifu)	cmomedB857
MELO3C006767.2	Lsi05G013710	Bottle gourd (USVL1VR-Ls)	lsimedB397
MELO3C006767.2	CsGy3G015570	Cucumber (Gy14) v2	cgybmedB201
MELO3C006767.2	Cla021846	Watermelon (97103) v1	medwmB447
MELO3C006767.2	ClCG05G007010	Watermelon (Charleston Gray)	medwcgB416
MELO3C006767.2	Cla97C05G088680	Watermelon (97103) v2	medwmbB423
MELO3C006767.2	Bhi01G000839	Wax gourd	medwgoB530
MELO3C006767.2	Carg15518	Silver-seed gourd	carmedB0706
MELO3C006767.2	CsaV3_3G015700	Cucumber (Chinese Long) v3	cucmedB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006767.2	Cucurbita maxima (Rimu)	cmamedB273
MELO3C006767.2	Cucurbita moschata (Rifu)	cmomedB260
MELO3C006767.2	Cucurbita pepo (Zucchini)	cpemedB693
MELO3C006767.2	Cucurbita pepo (Zucchini)	cpemedB951
MELO3C006767.2	Silver-seed gourd	carmedB0292