MELO3C006630 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006630
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial transcription termination factor family protein, putative
Location	chr6 : 4704574 .. 4705387 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACACTTCGCCGTTATTCTCTGTCATGACCTCCGAAGTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAATTTATCTTCAGCAGAAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGAATGTTGACAGAGTTAGGGAAATGGGATTCAACCCTCAACGATTGCTGTTTGTTGTTGCTGTTTCTGGTCTGCAACGAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGACAAGAATAATGGTGCAATGGATTTCTTTGTCAACAAAATGGGATGCGAATCATCTTTAGCTGCTACTAGACCTCTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCAAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCCTGTTTCTTTCTCTGGGATTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCGTAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAAAGGATTCTTGATGATGAACAGGTTCGATCAGCATGAAAATTTAATCGTTTTTCTTCTGAACAGAAAGCTCATACCATTCACTAAGTTTCCTTCCATGATCATGTGTATAACACAGTGAATGCA

mRNA sequence

ATGATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACACTTCGCCGTTATTCTCTGTCATGACCTCCGAAGTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAATTTATCTTCAGCAGAAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGAATGTTGACAGAGTTAGGGAAATGGGATTCAACCCTCAACGATTGCTGTTTGTTGTTGCTGTTTCTGGTCTGCAACGAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGACAAGAATAATGGTGCAATGGATTTCTTTGTCAACAAAATGGGATGCGAATCATCTTTAGCTGCTACTAGACCTCTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCAAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCCTGTTTCTTTCTCTGGGATTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCGTAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAAAGGATTCTTGATGATGAACAGGTTCGATCAGCATGAAAATTTAATCGTTTTTCTTCTGAACAGAAAGCTCATACCATTCACTAAGTTTCCTTCCATGATCATGTGTATAACACAGTGAATGCA

Coding sequence (CDS)

ATGATTCCAGCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCGCTACCATAAAACACTTCGCCGTTATTCTCTGTCATGACCTCCGAAGTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAATTTATCTTCAGCAGAAGCCTAAAATGTTCTTGACAAGTTCCATCCGATTCAAGGAGAATGTTGACAGAGTTAGGGAAATGGGATTCAACCCTCAACGATTGCTGTTTGTTGTTGCTGTTTCTGGTCTGCAACGAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTTTAGAAGGCATCCATGGTGTATGATGCTTTCTGAGGACAAGAATAATGGTGCAATGGATTTCTTTGTCAACAAAATGGGATGCGAATCATCTTTAGCTGCTACTAGACCTCTTTTACTTTCACTTAGTTTGAAGAAGAGGATTTTGCCAAGAGGCTATGTTTATCAAGTGTTGCTGTCAAAGGGTTTGATTAAGAAACACGGGAATCCTGTTTCTTTCTCTGGGATTCCTGAAAAGCGTTTCATAGAAAAAATCATCAACCCTCGTAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATAAACAGAAATTAAAGGATTCTTGA

Protein sequence

MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS*

Homology

[Close]

BLAST of MELO3C006630 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.2e-54
Identity = 112/230 (48.70%), Postives = 156/230 (67.83%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+F++ +  L S+E  +  IK F+ IL  DL + V  NI  L++ GVP SNI+  L  
Sbjct: 152 IIPSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMN 211

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P  F+     F+EN++ V++MGFNP ++ FV+A+  ++ M KSTW++K++ Y++WG SE
Sbjct: 212 RPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSE 271

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEI LAF + P CM  SEDK    MDFFVNKMG ESSL A RPLL+ LSL+KRI+PR  V
Sbjct: 272 EEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSV 331

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKL 231
            QVLLSKGLIK   + V      EK F+ K +N  KE+ P L++LY++K+
Sbjct: 332 IQVLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKI 381

[Close]

BLAST of MELO3C006630 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.1e-53
Identity = 110/230 (47.83%), Postives = 154/230 (66.96%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+F++ +    SEE T+AT+K F+ +L  +    V  NI  L++ GVP SNI+  L  
Sbjct: 151 IIPSFNFFKDFFQSEEMTMATVKRFSRVLIVNPHICVESNINALQESGVPKSNIAALLSL 210

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P+ F+     F+E ++ V++MGF+P +  F  AV  +  M+KSTW++K++ Y++WG SE
Sbjct: 211 QPRAFMVRPNHFREILEEVKKMGFDPSKTRFPTAVQAMTGMSKSTWERKIDAYKRWGWSE 270

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           E+I LAF + PWCM+ SEDK    MDFFVNKMG ESSL A RP L+ LSL+KRI+PR  V
Sbjct: 271 EDIWLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSLIANRPFLIGLSLEKRIIPRYSV 330

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKL 231
            QVLLSKGLI K  + V      EK F+EK +N  KE+ P LL LY++K+
Sbjct: 331 VQVLLSKGLIDKDISLVVLFESTEKMFLEKFVNGYKEEAPQLLNLYQEKV 380

[Close]

BLAST of MELO3C006630 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52
Identity = 105/230 (45.65%), Postives = 158/230 (68.70%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP++++ +  L S++  +  +K F+ IL  D+ + V  N+  L++ GVP SNI+  L+ 
Sbjct: 155 VIPSYNFFKDFLQSDKMAITVVKRFSRILLFDIHTYVASNMNALQEFGVPKSNIAGLLRN 214

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P  F+     F+EN++ V++MGFNP ++ FV+AV  ++   KS+W++K+++Y+ WG SE
Sbjct: 215 QPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAVQAIRAGGKSSWERKIDIYKSWGWSE 274

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEI LAF + PWCM+ SEDK    MDFFVNKMG ESSL A RP+L+S SL+KRI+PR  V
Sbjct: 275 EEIRLAFTKSPWCMIYSEDKIMTTMDFFVNKMGRESSLIARRPVLISHSLEKRIIPRYSV 334

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKL 231
            QVLLSKGLI K  +  +     EK F+ K +N  KE+ P L++LY++K+
Sbjct: 335 VQVLLSKGLIDKDFSLPTVFQSTEKMFLHKFVNVYKEEAPQLMKLYQEKI 384

[Close]

BLAST of MELO3C006630 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.0e-52
Identity = 105/225 (46.67%), Postives = 154/225 (68.44%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+F++++  L S+E  +  +K F+ IL  DL + V  N+  L++ GVP SNI+  L  
Sbjct: 158 IIPSFNFLKDFLQSDEMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMY 217

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P  F+ +   F++N++ V++MGFNP ++ FV+A+  ++   +S W++K+++Y+KWG SE
Sbjct: 218 RPMAFMVNPNLFRKNLEEVKKMGFNPSQMKFVLAIQAMRAGGESCWERKIDIYKKWGWSE 277

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEI LAF + PWCM+ SEDK    MDFFVNKMG ESSL A RP L+ LSL+KRI+PR  V
Sbjct: 278 EEIRLAFTKSPWCMIYSEDKIMAKMDFFVNKMGRESSLIAHRPFLIGLSLEKRIIPRYSV 337

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLEL 226
            QVLLSKGLI K  + V      EK F+E+ +N  KE+ P L++L
Sbjct: 338 VQVLLSKGLINKDISLVVLFESTEKTFLERFVNAYKEEAPQLIKL 382

[Close]

BLAST of MELO3C006630 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.3e-49
Identity = 102/231 (44.16%), Postives = 152/231 (65.80%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+F++ +  L S++  +  +K F+ IL  DL + V  N+  L++ GVP SNI+  L  
Sbjct: 539 IIPSFNFFKDFLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMN 598

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P  F+     F+EN++ V++MG NP ++ FV+A+  ++   KS+W++K+++Y++WG SE
Sbjct: 599 QPMAFMVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKRWGWSE 658

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEI LAF + PWCM+ SEDK    MDFFVNKMG ESS  A RP L+S SL+KRI+PR  V
Sbjct: 659 EEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSV 718

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLK 232
            QVLLSKGLI K  +  +     E  F+ K ++  KE+ P LL L  +++K
Sbjct: 719 VQVLLSKGLISKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLEHKEMK 769

HSP 2 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 104/230 (45.22%), Postives = 152/230 (66.09%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+F++ +  L S++  +  +K F+ IL  DL + V  N+  L++ GVP SNI+  L  
Sbjct: 158 IIPSFNFFKDXLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMN 217

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P  F+     F+EN++ V+ MGFNP ++ FV+A+  ++   K +W++K+++Y++WG SE
Sbjct: 218 QPMAFMVRPNLFRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWERKIDIYKRWGWSE 277

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEI LAF + PWCM+ SEDK    MDFFVNKMG ESS  A RP L+S SL+KRI+PR  V
Sbjct: 278 EEIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSV 337

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKL 231
            QVLLSKGLI K  +  +     E  F+ K ++  KE+ P LL LY++KL
Sbjct: 338 VQVLLSKGLINKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006630 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 172.2 bits (435), Expect = 3.9e-43
Identity = 88/227 (38.77%), Postives = 140/227 (61.67%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP+++++++VL S+EK +A ++    +   D   ++ PNI  + + GVP+  I + L  
Sbjct: 173 LIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTH 232

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQ-RMTKSTWDKKVEVYRKWGLS 120
            P+  +  +  F+    + +EMGFNPQ+  FV+A+  L  +  KS WDK  EVY++WG S
Sbjct: 233 FPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWS 292

Query: 121 EEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGY 180
           E++I  AF++HP CMMLSE K N  M++FVN+M       A  P++L  SL+KRI+PR  
Sbjct: 293 EDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCS 352

Query: 181 VYQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELY 227
           V +VL+S GL+K+  +  S     EK F+EK++   +E++P L+ LY
Sbjct: 353 VTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006630 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-29
Identity = 67/225 (29.78%), Postives = 126/225 (56.00%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IP +D ++++L  EE  +  +K         +   V   + I +++GVPD +I   +Q 
Sbjct: 160 LIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQA 219

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
            P  F +   RF E ++RV   GF+P++  FV A+      ++S  ++K ++++ +G S+
Sbjct: 220 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 279

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           E+   A  R P C+ +S++K    +++ VN +G ++     RP++LSLS++KRI PR  V
Sbjct: 280 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 339

Query: 181 YQVLLSKGLIKKHG-NPVSFSGIPEKRFIEKIINPRKEQIPGLLE 225
             +LLSKGL+KK   N  +   +    F++K +   ++++P L++
Sbjct: 340 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006630 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 114.8 bits (286), Expect = 7.3e-26
Identity = 68/218 (31.19%), Postives = 117/218 (53.67%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFA--VILCHDLRSSVGPNIEILKQIGVPDSNISIYL 60
           +IP  + +++++  + + L  I      ++L  D    + PNI  L+  G+  S ++  L
Sbjct: 143 LIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLL 202

Query: 61  QQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGL 120
           +++P++F  S  + +  V R  ++GF     + V AV  L  +++ T+D+KV+++   G 
Sbjct: 203 RRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGF 262

Query: 121 SEEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRG 180
           SE+EI    RR P  +  SEDK     +F++ +MG E    A RP +LS +L+KR++PR 
Sbjct: 263 SEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRL 322

Query: 181 YVYQVLLSKGLI----KKHGNPVSFSGIPEKRFIEKII 213
            V Q+L  KGL+    KK  N V    + E+ F+EK +
Sbjct: 323 KVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of MELO3C006630 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 34/119 (28.57%), Postives = 63/119 (52.94%), Query Frame = 1


Query: 108 KKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLS 167
           K V+ + + G +++E+ +  +RHP C+ L+ D      +F V  MG    + A+ P++L 
Sbjct: 327 KSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLG 386

Query: 168 LSLKKRILPRGYVYQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELY 227
            SL+K +LPR  V + L+S GLI +     S    P+ +F++  +   ++ +P L  ++
Sbjct: 387 FSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

HSP 2 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 35/134 (26.12%), Postives = 71/134 (52.99%), Query Frame = 1


Query: 5   FDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKM 64
           +DY++ +L  ++ + ++ K          +++   N+ +L+++GVP   +   L  + K 
Sbjct: 163 YDYVKEILQDQDSSSSSSKR--------KQTNRNRNVSVLRKLGVPQRLLLNLLISRAKP 222

Query: 65  FLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSEEEIC 124
            +    RF+E+V ++ EMGF+P+   FV A+     ++  T ++KV  Y + GLS  E+ 
Sbjct: 223 -VCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVW 282

Query: 125 LAFRRHPWCMMLSE 139
             F++ P+ +  SE
Sbjct: 283 AVFKKWPFSLKYSE 287

HSP 3 Score: 35.0 bits (79), Expect = 7.4e-02
Identity = 13/33 (39.39%), Postives = 22/33 (66.67%), Query Frame = 1


Query: 108 KKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDK 141
           +K E  ++ GL++EE+CL  +++P C+  SE+K
Sbjct: 292 QKFETLKRVGLTKEEVCLVVKKYPECVGTSEEK 324

[Close]

BLAST of MELO3C006630 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10
Identity = 33/101 (32.67%), Postives = 60/101 (59.41%), Query Frame = 1


Query: 40  NIEILKQIGVPDSNISIYLQQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQ 99
           NI +L+++GVP   +   L  + +  +    +F+E++ +V +MGF+P +  FV A+  + 
Sbjct: 188 NISVLRELGVPQKLLFSLLISRYQP-VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVY 247

Query: 100 RMTKSTWDKKVEVYRKWGLSEEEICLAFRRHPWCMMLSEDK 141
            M++ T ++KV VY++ G SE EI   F++ P+ +  SE K
Sbjct: 248 EMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKK 287

HSP 2 Score: 58.2 bits (139), Expect = 8.1e-09
Identity = 39/197 (19.80%), Postives = 88/197 (44.67%), Query Frame = 1


Query: 36  SVGPNIEILKQIGVPDSNISIYLQQKPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAV 95
           ++   + + K++G  ++ I    ++ P     S  +     + +++ G   + ++ V+  
Sbjct: 252 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVL-- 311

Query: 96  SGLQRMTKSTWDK---KVEVYRKWGLSEEEICLAFRRHPWCMMLSEDKNNGAMDFFVNKM 155
               +  +S+  K    +E++   G S ++  +  +R+P C   S +      +  V  M
Sbjct: 312 KSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMM 371

Query: 156 GCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSKGLIKKHGNPVSFSGI-PEKRFIEKI 215
                     P +L  SL+KRI+PR  V + L+SKGLI     P+S   +  ++ F+++ 
Sbjct: 372 NWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRY 431

Query: 216 INPRKEQIPGLLELYKQ 229
           +    + +P L+ ++ +
Sbjct: 432 VMKHDKLVPKLMAIFNR 446

[Close]

BLAST of MELO3C006630 vs. NCBI nr
Match: gi|659076716|ref|XP_008438830.1| (PREDICTED: uncharacterized protein LOC103483816 [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 4.2e-100
Identity = 188/223 (84.30%), Postives = 201/223 (90.13%), Query Frame = 1


Query: 11  VLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQKPKMFLTSSI 70
           +LGSEEKTLA IK FA IL  DLR SV PNIEILKQIGVPDSNI  YLQ +P+ FLT+SI
Sbjct: 1   MLGSEEKTLAAIKRFAGILAWDLRISVSPNIEILKQIGVPDSNILKYLQGQPRHFLTNSI 60

Query: 71  RFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSEEEICLAFRRH 130
           RFKE V+RV EMGFNPQ+L FV+AVSGL+ MTKSTWDKKVEVYRKWGLSEEEICLAFRRH
Sbjct: 61  RFKETVERVTEMGFNPQQLQFVIAVSGLRAMTKSTWDKKVEVYRKWGLSEEEICLAFRRH 120

Query: 131 PWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYVYQVLLSKGLI 190
           PWCMMLSEDK NGAMDFFVNKMGCESS AA+RP++LSLSLKKRILPRGYVYQVLLSKGLI
Sbjct: 121 PWCMMLSEDKINGAMDFFVNKMGCESSFAASRPIVLSLSLKKRILPRGYVYQVLLSKGLI 180

Query: 191 KKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           KK+GNPVSF GI EKRFIEKIINP KEQIPGLLELYKQK  +S
Sbjct: 181 KKYGNPVSFFGISEKRFIEKIINPHKEQIPGLLELYKQKSMNS 223

[Close]

BLAST of MELO3C006630 vs. NCBI nr
Match: gi|659076740|ref|XP_008438843.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96
Identity = 181/233 (77.68%), Postives = 200/233 (85.84%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDYIQAVLGSEEKTL  IK+FA IL  DLR SVGPNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQY 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLT+ IRFKE VDRV EMGFNPQ+L FVVAV  L+ +TKSTWDKKVEVYRKWGLSE
Sbjct: 191 RPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAF+RHPWCMM+SEDK NG MDFFVNK+GCESS  A+RP+L+SLSLKKRI PRGYV
Sbjct: 251 EEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLL+KGLIKKH +   F    EK FIEKII+P KEQIPGLLE Y+QKL DS
Sbjct: 311 YQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDS 363

[Close]

BLAST of MELO3C006630 vs. NCBI nr
Match: gi|659076720|ref|XP_008438832.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96
Identity = 181/233 (77.68%), Postives = 200/233 (85.84%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDYIQAVLGSEEKTL  IK+FA IL  DLR SVGPNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQY 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLT+ IRFKE VDRV EMGFNPQ+L FVVAV  L+ +TKSTWDKKVEVYRKWGLSE
Sbjct: 191 RPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAF+RHPWCMM+SEDK NG MDFFVNK+GCESS  A+RP+L+SLSLKKRI PRGYV
Sbjct: 251 EEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLL+KGLIKKH +   F    EK FIEKII+P KEQIPGLLE Y+QKL DS
Sbjct: 311 YQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDS 363

[Close]

BLAST of MELO3C006630 vs. NCBI nr
Match: gi|659076744|ref|XP_008438845.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96
Identity = 181/233 (77.68%), Postives = 200/233 (85.84%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDYIQAVLGSEEKTL  IK+FA IL  DLR SVGPNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQY 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLT+ IRFKE VDRV EMGFNPQ+L FVVAV  L+ +TKSTWDKKVEVYRKWGLSE
Sbjct: 191 RPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAF+RHPWCMM+SEDK NG MDFFVNK+GCESS  A+RP+L+SLSLKKRI PRGYV
Sbjct: 251 EEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLL+KGLIKKH +   F    EK FIEKII+P KEQIPGLLE Y+QKL DS
Sbjct: 311 YQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDS 363

[Close]

BLAST of MELO3C006630 vs. NCBI nr
Match: gi|659076736|ref|XP_008438841.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96
Identity = 181/233 (77.68%), Postives = 200/233 (85.84%), Query Frame = 1


Query: 1   MIPAFDYIQAVLGSEEKTLATIKHFAVILCHDLRSSVGPNIEILKQIGVPDSNISIYLQQ 60
           +IPAFDYIQAVLGSEEKTL  IK+FA IL  DLR SVGPNIEILKQIGVPDSNI  YLQ 
Sbjct: 131 IIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVPDSNIFKYLQY 190

Query: 61  KPKMFLTSSIRFKENVDRVREMGFNPQRLLFVVAVSGLQRMTKSTWDKKVEVYRKWGLSE 120
           +P++FLT+ IRFKE VDRV EMGFNPQ+L FVVAV  L+ +TKSTWDKKVEVYRKWGLSE
Sbjct: 191 RPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKVEVYRKWGLSE 250

Query: 121 EEICLAFRRHPWCMMLSEDKNNGAMDFFVNKMGCESSLAATRPLLLSLSLKKRILPRGYV 180
           EEICLAF+RHPWCMM+SEDK NG MDFFVNK+GCESS  A+RP+L+SLSLKKRI PRGYV
Sbjct: 251 EEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSLKKRIFPRGYV 310

Query: 181 YQVLLSKGLIKKHGNPVSFSGIPEKRFIEKIINPRKEQIPGLLELYKQKLKDS 234
           YQVLL+KGLIKKH +   F    EK FIEKII+P KEQIPGLLE Y+QKL DS
Sbjct: 311 YQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKLMDS 363

The following BLAST results are available for this feature:

BLAST of MELO3C006630 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	4.2e-54	48.70	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5B1K5_VITVI	2.1e-53	47.83	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
A5C3Y0_VITVI	1.0e-52	45.65	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1	[more]
F6HDG2_VITVI	3.0e-52	46.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	5.3e-49	44.16	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]

BLAST of MELO3C006630 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	3.9e-43	38.77	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	4.1e-29	29.78	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	7.3e-26	31.19	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	1.3e-11	28.57	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	3.3e-10	32.67	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076716\|ref\|XP_008438830.1\|	4.2e-100	84.30	PREDICTED: uncharacterized protein LOC103483816 [Cucumis melo]	[more]
gi\|659076740\|ref\|XP_008438843.1\|	1.3e-96	77.68	PREDICTED: uncharacterized protein LOC103483819 isoform X6 [Cucumis melo]	[more]
gi\|659076720\|ref\|XP_008438832.1\|	1.3e-96	77.68	PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo]	[more]
gi\|659076744\|ref\|XP_008438845.1\|	1.3e-96	77.68	PREDICTED: uncharacterized protein LOC103483819 isoform X8 [Cucumis melo]	[more]
gi\|659076736\|ref\|XP_008438841.1\|	1.3e-96	77.68	PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU62433	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006630T1	MELO3C006630T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62433	MU62433	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 17..190 score: 1.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 124..155 score: 8.9coord: 55..85 score: 1100.0coord: 156..190 score: 120.0coord: 19..50 score:
None	No IPR available	unknown	Coil	Coil	coord: 223..233 scor
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 1..231 score: 3.9
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 1..231 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006630	CsGy3G014320	Cucumber (Gy14) v2	cgybmeB200

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006630	Silver-seed gourd	carmeB0610
MELO3C006630	Silver-seed gourd	carmeB0828
MELO3C006630	Cucumber (Chinese Long) v3	cucmeB236
MELO3C006630	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006630	Watermelon (97103) v2	mewmbB434
MELO3C006630	Watermelon (97103) v2	mewmbB448
MELO3C006630	Wax gourd	mewgoB521
MELO3C006630	Wax gourd	mewgoB529
MELO3C006630	Melon (DHL92) v3.5.1	memeB051
MELO3C006630	Cucumber (Gy14) v1	cgymeB307
MELO3C006630	Cucumber (Gy14) v1	cgymeB439
MELO3C006630	Cucurbita maxima (Rimu)	cmameB242
MELO3C006630	Cucurbita maxima (Rimu)	cmameB342
MELO3C006630	Cucurbita maxima (Rimu)	cmameB763
MELO3C006630	Cucurbita maxima (Rimu)	cmameB850
MELO3C006630	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006630	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006630	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006630	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006630	Wild cucumber (PI 183967)	cpimeB230
MELO3C006630	Wild cucumber (PI 183967)	cpimeB501
MELO3C006630	Cucumber (Chinese Long) v2	cumeB236
MELO3C006630	Cucumber (Chinese Long) v2	cumeB499
MELO3C006630	Watermelon (Charleston Gray)	mewcgB427
MELO3C006630	Watermelon (Charleston Gray)	mewcgB442
MELO3C006630	Watermelon (97103) v1	mewmB486
MELO3C006630	Watermelon (97103) v1	mewmB461
MELO3C006630	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006630	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006630	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006630	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006630	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006630	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006630	Bottle gourd (USVL1VR-Ls)	lsimeB369