CsGy3G014320 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G014320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Mitochondrial transcription termination factor family protein
Location	Chr3 : 10610052 .. 10611146 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAACTTGCTTCGCAGAATCCTTCTACTTAGATCTCCATCCTCAGTATTTTCTCATGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTTTCCGTCTCTTCTGAGATTGTATCATCTCCGAAGTCTGCTTCGTTGGCTTCTAATGCTGTTCGGCTCGAGAATAATCGGAAGGATGTAATTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGCCCTTGCCAAGAGGTTTCCTCCAATTTTTTCTGCGAAGCCCGAAAAAACCCTATTGCCCAAATTGTTATTTTTTCAATCTAAAGGTCTTTCTTTCCCAGAGATTGTCAGATTAGTATGTGCCTTTCCACGTGTTTTAACGAGAAGTTTAGACAAACGACTCATTCCTTCCTTTGAATACATTCAAGCCGTGCTTGGAAGTGAGAAGACTCTCGCTGCCATAAAACGCTCTGCGGATATTCTTTTTTGGGATTTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCATTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTTAACCCTCGAGGATTGCTGTTTGTTATTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAATTGGGGATTGTCTGAAGAAGAGATCCATTTAGCTTTTAGAAGGAATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTATGTCAACAAAATGGGATGCGATTCATCTTTCGCTGCTAGAAGACCAGTTTTACTTCAACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAACCGAGAATATTTGTTTGTTGTTTGAGTCTCCTGAAAAACGTTTCATAGAAAAATACATCAACCCGCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAACAGAAATTAATGGATTCTAGGAGATGA

mRNA sequence

ATGTCTAACTTGCTTCGCAGAATCCTTCTACTTAGATCTCCATCCTCAGTATTTTCTCATGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTTTCCGTCTCTTCTGAGATTGTATCATCTCCGAAGTCTGCTTCGTTGGCTTCTAATGCTGTTCGGCTCGAGAATAATCGGAAGGATGTAATTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGCCCTTGCCAAGAGGTTTCCTCCAATTTTTTCTGCGAAGCCCGAAAAAACCCTATTGCCCAAATTGTTATTTTTTCAATCTAAAGGTCTTTCTTTCCCAGAGATTGTCAGATTAGTATGTGCCTTTCCACGTGTTTTAACGAGAAGTTTAGACAAACGACTCATTCCTTCCTTTGAATACATTCAAGCCGTGCTTGGAAGTGAGAAGACTCTCGCTGCCATAAAACGCTCTGCGGATATTCTTTTTTGGGATTTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCATTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTTAACCCTCGAGGATTGCTGTTTGTTATTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAATTGGGGATTGTCTGAAGAAGAGATCCATTTAGCTTTTAGAAGGAATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTATGTCAACAAAATGGGATGCGATTCATCTTTCGCTGCTAGAAGACCAGTTTTACTTCAACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAACCGAGAATATTTGTTTGTTGTTTGAGTCTCCTGAAAAACGTTTCATAGAAAAATACATCAACCCGCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAACAGAAATTAATGGATTCTAGGAGATGA

Coding sequence (CDS)

ATGTCTAACTTGCTTCGCAGAATCCTTCTACTTAGATCTCCATCCTCAGTATTTTCTCATGGATTTTCCGAAAGTCCGTTGAAATCTCTCACATACTTTTCCGTCTCTTCTGAGATTGTATCATCTCCGAAGTCTGCTTCGTTGGCTTCTAATGCTGTTCGGCTCGAGAATAATCGGAAGGATGTAATTGCGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGCCCTTGCCAAGAGGTTTCCTCCAATTTTTTCTGCGAAGCCCGAAAAAACCCTATTGCCCAAATTGTTATTTTTTCAATCTAAAGGTCTTTCTTTCCCAGAGATTGTCAGATTAGTATGTGCCTTTCCACGTGTTTTAACGAGAAGTTTAGACAAACGACTCATTCCTTCCTTTGAATACATTCAAGCCGTGCTTGGAAGTGAGAAGACTCTCGCTGCCATAAAACGCTCTGCGGATATTCTTTTTTGGGATTTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCATTACCAGCCTAGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGACTGTAGAGAGAGTTACGGAAATGGGATTTAACCCTCGAGGATTGCTGTTTGTTATTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAATTGGGGATTGTCTGAAGAAGAGATCCATTTAGCTTTTAGAAGGAATCCATGGTGTATGATAGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTATGTCAACAAAATGGGATGCGATTCATCTTTCGCTGCTAGAAGACCAGTTTTACTTCAACTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTATGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAACCGAGAATATTTGTTTGTTGTTTGAGTCTCCTGAAAAACGTTTCATAGAAAAATACATCAACCCGCATAAGGAGCAGATTCCTGGATTGTTGGAGTTGTATGAACAGAAATTAATGGATTCTAGGAGATGA

Protein sequence

MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRKDVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFPRVLTRSLDKRLIPSFEYIQAVLGSEKTLAAIKRSADILFWDFQISVGPNIEILKQIGVPDSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVEVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLKKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKLMDSRR

Homology

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BLAST of CsGy3G014320 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 1.1e-154
Identity = 292/365 (80.00%), Postives = 315/365 (86.30%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MS   R +LLLRSPSSVFSHGFSESPLKSLTY S SSEIVSSP+SASLASNAV+LENN K
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            VIALLANH FS+SQIS LA R+P I SA PEKTLLPKLLFFQSKGLS PEI  LV +  
Sbjct: 61  AVIALLANHVFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGS-EKTLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
                S++KR+IP+F+YIQAVLGS EKTLA IK+ A IL  D +ISVGPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
           DS+ILKY  YQPRVFLTNSIRFKETVERV EMGFNP+   FV+AVFALRSMTKSTWDKKV
Sbjct: 181 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           E+ R WGLSEE+I LAFRRNPWCM  SEDKINGAMDF+VNKMGC+SSFAARRPVLL  SL
Sbjct: 241 EILRKWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKL 360
           KKRILPRGYVYQVLLSKGLIKK EN+ L FESPEKRFIEKYINP KEQIP LLELY+QKL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKL 360

Query: 361 MDSRR 365
           M+SRR
Sbjct: 361 MESRR 365

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BLAST of CsGy3G014320 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 550.1 bits (1416), Expect = 5.8e-153
Identity = 288/366 (78.69%), Postives = 316/366 (86.34%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MS L RRILLLRSPSSVFSHGFSESPLKSL + S SSEIVSSPKSASLASNAV+LENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            VI LLANHGFS+SQIS + +R P I +A PEK LLPKLLFFQSKGLS PEI +LVC F 
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGS-EKTLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
              T SL+KR+I +F+YIQAVLGS EKTLAAIK+ A IL  D QISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
           DSNILKYL YQPRVF+ +SIRFKE VERVTEMGFNP+ L F++AVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           EVYR WGLSEEEI LAF+R+PWCM+ SEDKINGAMDF+VNK+GC+SSF ARRP L+ LSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHK-EQIPGLLELYEQK 360
           KKR+ PRGYVYQVLL KGLIKK  NI L   S EKRFIEK+INPHK EQIPGLLELY+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDSRR 365
           LMDSRR
Sbjct: 361 LMDSRR 366

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BLAST of CsGy3G014320 vs. NCBI nr
Match: XP_016899006.1 (PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo])

HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151
Identity = 280/364 (76.92%), Postives = 308/364 (84.62%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MSNL RRILLLRSPS VF  GFS+SPLKSL Y S SSEIVSSP+SA LASNAV+L+ NRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            VIA LA++GFSESQIS+  KRFP I SA PEK LLPKLLFFQSKGLS PEIV+LVC+  
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGSEKTLAAIKRSADILFWDFQISVGPNIEILKQIGVPD 180
                SL+KR+IP+F+YIQAVLGSEK LA IK  A IL  D  ISVGPNIEILKQIGVPD
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPNIEILKQIGVPD 180

Query: 181 SNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVE 240
           SNILKYL YQPRVFL NSIRFKE VERVTEMGFNP+ L FV+AVFALR+MTKSTWDKKVE
Sbjct: 181 SNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVE 240

Query: 241 VYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLK 300
           VYR WGLSEEEI L F+R+PWCM+ SEDKINGAMDF+VNK+GC+SSF ARRP L+ LSLK
Sbjct: 241 VYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLK 300

Query: 301 KRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKLM 360
           KR+ PRGYVYQVLL+KGLIKK +N+   FE PEKRFIEK INPHKEQIP LLELYE+KLM
Sbjct: 301 KRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLM 360

Query: 361 DSRR 365
           D  R
Sbjct: 361 DYGR 364

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BLAST of CsGy3G014320 vs. NCBI nr
Match: XP_011652762.1 (PREDICTED: uncharacterized protein LOC101208771 [Cucumis sativus])

HSP 1 Score: 544.3 bits (1401), Expect = 3.2e-151
Identity = 291/364 (79.95%), Postives = 292/364 (80.22%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK
Sbjct: 389 MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 448

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
           DVIALLANHGFS+                                               
Sbjct: 449 DVIALLANHGFSD----------------------------------------------- 508

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGSEKTLAAIKRSADILFWDFQISVGPNIEILKQIGVPD 180
                                   EKTLA IKRSADILFWDFQISVGPNIEILKQIGVPD
Sbjct: 509 -----------------------YEKTLAVIKRSADILFWDFQISVGPNIEILKQIGVPD 568

Query: 181 SNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVE 240
           SNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVE
Sbjct: 569 SNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVE 628

Query: 241 VYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLK 300
           VYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLK
Sbjct: 629 VYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLK 682

Query: 301 KRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKLM 360
           KRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKLM
Sbjct: 689 KRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKLM 682

Query: 361 DSRR 365
           DSRR
Sbjct: 749 DSRR 682

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BLAST of CsGy3G014320 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150
Identity = 278/365 (76.16%), Postives = 306/365 (83.84%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MSNL RRILLLRSPSS FSHGFSE PLK L Y S SSEIVSSPKSASLASNAV+L+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            ++ALLANHGFSESQIS + KR   I    PEK L PKLLFFQSKGLS PEIV+LVC+  
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGS-EKTLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
              T SL+KR+IP+F+Y+QAV GS EKTL  IKR A IL WD +ISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
           DSNI KYL YQPRVFL N +RFKE VERV EMGFNP+ L FV+AVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           EVYR WGLSEEEI +AFR++P CM  SEDKING MDF+VNK+GC+SSFAARRP+LL LSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKL 360
           KKRILPRGY+YQVLLSKGLIKK EN+   FESPEKRFIEK+INPH EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MDSRR 365
            D RR
Sbjct: 361 KDYRR 365

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BLAST of CsGy3G014320 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 169.1 bits (427), Expect = 5.1e-42
Identity = 111/318 (34.91%), Postives = 166/318 (52.20%), Query Frame = 0


Query: 42  SPKSASLASNAVRLENNRK--DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKL 101
           SP SA++AS  + L++  +   V+ LL +HGF+ +QIS+L K+ P +  A  E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFQSKGLSFPEIVR-LVCAFXXXXTRSLDKRLIPSFEYIQAVLGSEKTLAAIKRSADIL 161
            FF S G+S   + R L    XXXX                                   
Sbjct: 142 SFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 162 FWDFQISVGPNIEILKQIGVPDSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGL 221
                         + + GVP+  I   L + P   +  +  F+   ++  EMGFNP+  
Sbjct: 202 XXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 LFVIAVFALRSM-TKSTWDKKVEVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFY 281
            FV+A+ AL     KS WDK  EVY+ WG SE++I  AF+++P CM+ SE KIN  M+++
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNKMGCDSSFAARRPVLLQLSLKKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFI 341
           VN+M       A+ PV+L  SL+KRI+PR  V +VL+S GL+K+  ++  L    EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKYINPHKEQIPGLLELY 356
           EK +  ++E++P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

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BLAST of CsGy3G014320 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-39
Identity = 108/356 (30.34%), Postives = 184/356 (51.69%), Query Frame = 0


Query: 4   LLRRILLLRSPSSVFSHGFSESP--LKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK- 63
           L+ RI  L S S V S    +    L+S T   +      S +SA   S  V+L +++K 
Sbjct: 29  LVGRIRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKP 88

Query: 64  -DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAF 123
             V+AL  +HGF+  QI+++ K FP + S  PE  + PK                     
Sbjct: 89  DSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKXXXXXXXXXXXXXXXXXXXXX 148

Query: 124 XXXXTRSLDKRLIPSFEYIQAVLGSEKTLA-AIKRSADILFWDFQISVGPNIEILKQIGV 183
           XXXX     KRLIP ++ ++++L  E+++   +KR            V   + I +++GV
Sbjct: 149 XXXXXXXXHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGV 208

Query: 184 PDSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKK 243
           PD +I   +   P  F +   RF E + RV   GF+P+   FV A+ A    ++S  ++K
Sbjct: 209 PDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERK 268

Query: 244 VEVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLS 303
            ++++ +G S+E+   A  R P C+  S++KI   +++ VN +G  +     RPV+L LS
Sbjct: 269 FKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLS 328

Query: 304 LKKRILPRGYVYQVLLSKGLIKKTE-NICLLFESPEKRFIEKYINPHKEQIPGLLE 354
           ++KRI PR  V  +LLSKGL+KK + N   + +     F++K++  +++++P L++
Sbjct: 329 MEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsGy3G014320 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-37
Identity = 93/289 (32.18%), Postives = 157/289 (54.33%), Query Frame = 0


Query: 60  KDVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAF 119
           + VI +L ++ FS++QI    +  P +     EK L PKL FF+  G +   + + V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 XXXXTRSLDKRLIPSFEYIQAVLG-SEKTLAAIKRSAD--ILFWDFQISVGPNIEILKQI 179
                 SL K+LIP+ E +++++    + L  I       +L  D  + + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWD 239
           G+  S +   L  QPR+F  +  + +  V R  ++GF     + V AV +L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 KKVEVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQ 299
           +KV+++   G SE+EI    RR+P  +  SEDK+    +FY+ +MG +    A+RP +L 
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 LSLKKRILPRGYVYQVLLSKGLI----KKTENICLLFESPEKRFIEKYI 342
            +L+KR++PR  V Q+L  KGL+    KK +N+  + E  E+ F+EKY+
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYV 360

[Close]

BLAST of CsGy3G014320 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-24
Identity = 96/368 (26.09%), Postives = 166/368 (45.11%), Query Frame = 0


Query: 28  KSLTYFSVSSEIVSSPKSASLASNAVRLEN--NRKDVIALLANHGFSESQISALAKRFPP 87
           K+ T   +   +  S K A   S  V  E+  N   V++L  ++GF++SQIS +   +P 
Sbjct: 51  KNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPL 110

Query: 88  IFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFXXXXTRSLDKRLIPSFEYIQAVLGSE 147
           +  A  +K L  KL   QS+G S  EI  +V        R L K+ I    Y  AV   +
Sbjct: 111 LLVADAKKALGRKLQILQSRGASSSEITEIVST----VPRILGKKSIT--VYYDAV---K 170

Query: 148 KTLAAIKRSADILFWDFQISVGPNIEILKQIGVPDSNILKYLHYQPRVFLTNSIRFKETV 207
             + A   S+  L    Q +   N+  L+++G+P   +L  L  + +  +     F  ++
Sbjct: 171 DIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQP-VCGKENFDASL 230

Query: 208 ERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVEVYRN--------W------------ 267
           ++V EMGF+P    FV+A+  L  M++ T ++KV V+R+        W            
Sbjct: 231 KKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKV 290

Query: 268 ---------------GLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAAR 327
                          G S  E  +  +R P C+  S + +    +F V KM    +    
Sbjct: 291 SKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVL 350

Query: 328 RPVLLQLSLKKRILPRGYVYQVLLSKGLIKKTEN---ICLLFESPEKRFIEKYINPHKEQ 356
            P +   S++KRI+PR  + + LLSKGL++K      +  +    ++ F+++Y+  H E 
Sbjct: 351 HPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNEL 408

[Close]

BLAST of CsGy3G014320 vs. TAIR10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-21
Identity = 97/393 (24.68%), Postives = 170/393 (43.26%), Query Frame = 0


Query: 5   LRRILLLRSPSSVFSHGFSESPL---------KSLTYFSVSSEIVS---SPKSASLASNA 64
           LR  + L    S FS+ FS S +         +    F+VS  + S   + K A   S  
Sbjct: 20  LRVSVNLFQNGSAFSNTFSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESISMK 79

Query: 65  VRLEN--NRKDVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFP 124
           V  +N  N   V++LL +HGF++SQIS + + FP +     EK+L PKL F QS G S  
Sbjct: 80  VSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSS 139

Query: 125 EIVRLVCAFXXXXTRSLDKRLIPSFEYIQAVLGSEKTLAAIKRSADILFWDFQISVGPNI 184
           E+   V A      +   K L   +++++ ++ ++K+    K    +     Q +   N+
Sbjct: 140 ELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEADKSSKLEKLCHSLPEGSKQENKIRNL 199

Query: 185 EILKQIGVPDSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSM 244
            +L+++GVP   +L  L       +    +FKE++++  E+GF+P    FV A+  L  +
Sbjct: 200 LVLREMGVP-QRLLFSLLISDAGDVCGKEKFKESLKKAVEIGFDPTTATFVKALNVLYGL 259

Query: 245 TKSTWDKKVEVYRNWGLSEEEIHLAFRRNP------------------------------ 304
           +    + K    +  GL+ +++   F++ P                              
Sbjct: 260 SDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKXXXXXXXXXXXXXXXXXXXXXXXXX 319

Query: 305 -----WCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLKKRILPRGYVYQVLLS 348
                         +    +F V +M       A  P +L  SL+KR +PR  V +VL+S
Sbjct: 320 XXXXXXXXXXXXXXMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLIS 379

[Close]

BLAST of CsGy3G014320 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 3.9e-153
Identity = 288/366 (78.69%), Postives = 316/366 (86.34%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MS L RRILLLRSPSSVFSHGFSESPLKSL + S SSEIVSSPKSASLASNAV+LENNRK
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            VI LLANHGFS+SQIS + +R P I +A PEK LLPKLLFFQSKGLS PEI +LVC F 
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGS-EKTLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
              T SL+KR+I +F+YIQAVLGS EKTLAAIK+ A IL  D QISVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
           DSNILKYL YQPRVF+ +SIRFKE VERVTEMGFNP+ L F++AVFALR+MTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           EVYR WGLSEEEI LAF+R+PWCM+ SEDKINGAMDF+VNK+GC+SSF ARRP L+ LSL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHK-EQIPGLLELYEQK 360
           KKR+ PRGYVYQVLL KGLIKK  NI L   S EKRFIEK+INPHK EQIPGLLELY+QK
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMDSRR 365
           LMDSRR
Sbjct: 361 LMDSRR 366

[Close]

BLAST of CsGy3G014320 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.6e-151
Identity = 280/364 (76.92%), Postives = 308/364 (84.62%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MSNL RRILLLRSPS VF  GFS+SPLKSL Y S SSEIVSSP+SA LASNAV+L+ NRK
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            VIA LA++GFSESQIS+  KRFP I SA PEK LLPKLLFFQSKGLS PEIV+LVC+  
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGSEKTLAAIKRSADILFWDFQISVGPNIEILKQIGVPD 180
                SL+KR+IP+F+YIQAVLGSEK LA IK  A IL  D  ISVGPNIEILKQIGVPD
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGSEKALATIKHFASILVRDLGISVGPNIEILKQIGVPD 180

Query: 181 SNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKVE 240
           SNILKYL YQPRVFL NSIRFKE VERVTEMGFNP+ L FV+AVFALR+MTKSTWDKKVE
Sbjct: 181 SNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKVE 240

Query: 241 VYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSLK 300
           VYR WGLSEEEI L F+R+PWCM+ SEDKINGAMDF+VNK+GC+SSF ARRP L+ LSLK
Sbjct: 241 VYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSLK 300

Query: 301 KRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKLM 360
           KR+ PRGYVYQVLL+KGLIKK +N+   FE PEKRFIEK INPHKEQIP LLELYE+KLM
Sbjct: 301 KRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKLM 360

Query: 361 DSRR 365
           D  R
Sbjct: 361 DYGR 364

[Close]

BLAST of CsGy3G014320 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.1e-150
Identity = 278/365 (76.16%), Postives = 306/365 (83.84%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MSNL RRILLLRSPSS FSHGFSE PLK L Y S SSEIVSSPKSASLASNAV+L+NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            ++ALLANHGFSESQIS + KR   I    PEK L PKLLFFQSKGLS PEIV+LVC+  
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGS-EKTLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
              T SL+KR+IP+F+Y+QAV GS EKTL  IKR A IL WD +ISVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
           DSNI KYL YQPRVFL N +RFKE VERV EMGFNP+ L FV+AVF LR+MTKSTWDKKV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           EVYR WGLSEEEI +AFR++P CM  SEDKING MDF+VNK+GC+SSFAARRP+LL LSL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKL 360
           KKRILPRGY+YQVLLSKGLIKK EN+   FESPEKRFIEK+INPH EQI GLLELYE+KL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MDSRR 365
            D RR
Sbjct: 361 KDYRR 365

[Close]

BLAST of CsGy3G014320 vs. TrEMBL
Match: tr|A0A1S3AYN7|A0A1S3AYN7_CUCME (uncharacterized protein LOC103484196 OS=Cucumis melo OX=3656 GN=LOC103484196 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.8e-143
Identity = 267/365 (73.15%), Postives = 302/365 (82.74%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MSNL RRILLLRS S VFS GFS SPLKSL Y S SSEIVSSP+SA LASNAV+ +N RK
Sbjct: 1   MSNLFRRILLLRSASPVFSQGFSGSPLKSLRYLSTSSEIVSSPESAPLASNAVQHKNKRK 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
           DVIALLA+HGFS+SQIS L K+FP +F + PEKTLLPKLLFF+SKGLS PEI +LVC+F 
Sbjct: 61  DVIALLADHGFSQSQISGLDKKFPKVFFSNPEKTLLPKLLFFRSKGLSSPEIAKLVCSFP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGSEK-TLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
                SL+KR+IP+F+YIQAV GSE+ +L AIKR + IL  D  ISVGPNIEILKQIGVP
Sbjct: 121 YVLNASLNKRIIPAFDYIQAVFGSEEDSLNAIKRFSGILMKDLGISVGPNIEILKQIGVP 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
            SNI KYL YQPR+FL N IRFKE+VERVTEMGFNP+ L FV+AVFALR+MTKSTWDKKV
Sbjct: 181 GSNIFKYLQYQPRMFLANPIRFKESVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           EVYR WGLSEEEI LAFRR P CM  SED IN  MDF++N+MGC+SS+ ARRP L   SL
Sbjct: 241 EVYRKWGLSEEEICLAFRRYPMCMALSEDNINDTMDFFINEMGCESSYVARRPTLFGCSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKL 360
           KKRILPRG+VYQVLLSKG IK+ + +  +F   EKRFIEK+INPHK QIPGLLELYE+KL
Sbjct: 301 KKRILPRGFVYQVLLSKGFIKELQKVSFMFLCTEKRFIEKFINPHKGQIPGLLELYEEKL 360

Query: 361 MDSRR 365
           MDSRR
Sbjct: 361 MDSRR 365

[Close]

BLAST of CsGy3G014320 vs. TrEMBL
Match: tr|A0A1S4DSL0|A0A1S4DSL0_CUCME (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 6.8e-142
Identity = 275/365 (75.34%), Postives = 299/365 (81.92%), Query Frame = 0


Query: 1   MSNLLRRILLLRSPSSVFSHGFSESPLKSLTYFSVSSEIVSSPKSASLASNAVRLENNRK 60
           MS L RRILLLRSPSSVFSHGFSE  LKSL + S SSEIVSSPKSASLASNA        
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECSLKSLRFLSTSSEIVSSPKSASLASNAA------- 60

Query: 61  DVIALLANHGFSESQISALAKRFPPIFSAKPEKTLLPKLLFFQSKGLSFPEIVRLVCAFX 120
            ++ALLANHGFSESQIS +AKR   I S  P+K L PKLLFFQSKGLS PEIV+LVC+  
Sbjct: 61  -LVALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 XXXTRSLDKRLIPSFEYIQAVLGS-EKTLAAIKRSADILFWDFQISVGPNIEILKQIGVP 180
              T SL+KR+IP+F+Y+QAVLGS EKTLA IK+ A IL  D +ISVGPNIEILKQIGV 
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQ 180

Query: 181 DSNILKYLHYQPRVFLTNSIRFKETVERVTEMGFNPRGLLFVIAVFALRSMTKSTWDKKV 240
           DSNILKYL YQPR+FL NSIRFKE VERVTEMGFNP  L FV+AVFALRSMTKSTWDKKV
Sbjct: 181 DSNILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EVYRNWGLSEEEIHLAFRRNPWCMIASEDKINGAMDFYVNKMGCDSSFAARRPVLLQLSL 300
           EVYR WGLSEEE  LAFRRNP CM  SEDKIN  MDF+VNK+G +SSF ARRP L+  SL
Sbjct: 241 EVYRKWGLSEEEFSLAFRRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSL 300

Query: 301 KKRILPRGYVYQVLLSKGLIKKTENICLLFESPEKRFIEKYINPHKEQIPGLLELYEQKL 360
           KKRILPRGYVYQVLLSKGLIKK ++  L FE  EKRFIEK INPHKEQIPGLLELY+QK+
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKV 357

Query: 361 MDSRR 365
           MDSRR
Sbjct: 361 MDSRR 357

The following BLAST results are available for this feature:

BLAST of CsGy3G014320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134480.2	1.1e-154	80.00	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
XP_008439382.1	5.8e-153	78.69	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
XP_016899006.1	2.5e-151	76.92	PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo]	[more]
XP_011652762.1	3.2e-151	79.95	PREDICTED: uncharacterized protein LOC101208771 [Cucumis sativus]	[more]
XP_016898974.1	1.6e-150	76.16	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]

BLAST of CsGy3G014320 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	5.1e-42	34.91	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.4e-39	30.34	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.7e-37	32.18	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	4.8e-24	26.09	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	1.0e-21	24.68	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsGy3G014320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G014320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	3.9e-153	78.69	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	1.6e-151	76.92	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	1.1e-150	76.16	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S3AYN7\|A0A1S3AYN7_CUCME	2.8e-143	73.15	uncharacterized protein LOC103484196 OS=Cucumis melo OX=3656 GN=LOC103484196 PE=...	[more]
tr\|A0A1S4DSL0\|A0A1S4DSL0_CUCME	6.8e-142	75.34	uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G014320.1	CsGy3G014320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 253..284 e-value: 5.3 score: 16.0 coord: 285..319 e-value: 43.0 score: 13.0 coord: 148..179 e-value: 1900.0 score: 1.7 coord: 77..108 e-value: 0.026 score: 23.7 coord: 113..145 e-value: 0.0097 score: 25.1 coord: 184..214 e-value: 320.0 score: 7.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 160..328 e-value: 5.6E-18 score: 64.9 coord: 64..221 e-value: 4.4E-19 score: 68.5
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 24..228 e-value: 7.8E-23 score: 83.0
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 37..360
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 37..360

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G014320	MELO3C006630	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G014320	CmaCh17G011170	Cucurbita maxima (Rimu)	cgybcmaB351
CsGy3G014320	CmoCh17G010920	Cucurbita moschata (Rifu)	cgybcmoB323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G014320	Cucumber (Gy14) v2	cgybcgybB111
CsGy3G014320	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G014320	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G014320	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G014320	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G014320	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G014320	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G014320	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G014320	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G014320	Cucurbita pepo (Zucchini)	cgybcpeB303
CsGy3G014320	Cucurbita pepo (Zucchini)	cgybcpeB309
CsGy3G014320	Cucurbita pepo (Zucchini)	cgybcpeB348
CsGy3G014320	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G014320	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G014320	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G014320	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G014320	Bottle gourd (USVL1VR-Ls)	cgyblsiB184
CsGy3G014320	Melon (DHL92) v3.5.1	cgybmeB149
CsGy3G014320	Melon (DHL92) v3.6.1	cgybmedB148
CsGy3G014320	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G014320	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G014320	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G014320	Watermelon (97103) v1	cgybwmB217
CsGy3G014320	Watermelon (97103) v1	cgybwmB262
CsGy3G014320	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G014320	Silver-seed gourd	carcgybB0605
CsGy3G014320	Silver-seed gourd	carcgybB0828
CsGy3G014320	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G014320	Cucumber (Chinese Long) v3	cgybcucB153
CsGy3G014320	Watermelon (97103) v2	cgybwmbB196
CsGy3G014320	Watermelon (97103) v2	cgybwmbB222
CsGy3G014320	Wax gourd	cgybwgoB248
CsGy3G014320	Wax gourd	cgybwgoB257