MELO3C006628 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006628
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	mitochondrial transcription termination factor-related / mTERF-related
Location	chr6 : 4697582 .. 4698840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGTCTCCCATTTTTACCGGCGGCCGCATGGCCTCTCCTGCTCGCGCCGCCCATTTTTCTTCATAGCTCCATCCTCTTTTGGGGCATTTGTAGTTTCTCTCATTCTTCTTCTCAACAAGTAACCAACAGGTCAGTCTTCCTTCTCCTCGCAGTTCTTACTGTCATGTATAACTTGTTTCGCAGAATCATTCTACTTAGATCTCCATTGTCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCGACCTCTTCTGAGATTGCATCATCTCCGAAATCTGCTTCGTTGGCTTCGAATATTGTTCAGCTCAAGAACAAGCGGAAGGCTGTACTTGCGTTTTTTGGGAATCATGGATTCTCTGAATCACAAATCTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCTAACCCCGAGACCCTATTTCCCATATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCCACGATAACCAAATTAGTATGTTCTGCTCCTCAAGTTTTAAATCGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACGTTCAAGCCATGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGTTTATTCTCGGTTGGAATCCTCGAATTTCAGTTGGTCCCAATATTGAACTTTTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTCGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGCATCCAGGGTGTATGGTATTGTCTGAGGATAATATTAATGATACAATGGATTTTTTTGTCAACAAAATGGAATGCGAATCATCTTCTGTTGCCAGAAGACCAACTTTATTTGCATTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACATAAGAATAATTTTTCGTTGTTTGAGTATCCTGAAAAGCGCTTCATAGAAAAAATCATAAACCGTCGTAAGGAGAAGATTCCTGGATTGTTGGAGTTGTATGAACAGAAATTAATGGATTCTAGAAGATGA

mRNA sequence

ACCGTCTCCCATTTTTACCGGCGGCCGCATGGCCTCTCCTGCTCGCGCCGCCCATTTTTCTTCATAGCTCCATCCTCTTTTGGGGCATTTGTAGTTTCTCTCATTCTTCTTCTCAACAAGTAACCAACAGGTCAGTCTTCCTTCTCCTCGCAGTTCTTACTGTCATGTATAACTTGTTTCGCAGAATCATTCTACTTAGATCTCCATTGTCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCGACCTCTTCTGAGATTGCATCATCTCCGAAATCTGCTTCGTTGGCTTCGAATATTGTTCAGCTCAAGAACAAGCGGAAGGCTGTACTTGCGTTTTTTGGGAATCATGGATTCTCTGAATCACAAATCTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCTAACCCCGAGACCCTATTTCCCATATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCCACGATAACCAAATTAGTATGTTCTGCTCCTCAAGTTTTAAATCGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACGTTCAAGCCATGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGTTTATTCTCGGTTGGAATCCTCGAATTTCAGTTGGTCCCAATATTGAACTTTTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTCGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGCATCCAGGGTGTATGGTATTGTCTGAGGATAATATTAATGATACAATGGATTTTTTTGTCAACAAAATGGAATGCGAATCATCTTCTGTTGCCAGAAGACCAACTTTATTTGCATTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACATAAGAATAATTTTTCGTTGTTTGAGTATCCTGAAAAGCGCTTCATAGAAAAAATCATAAACCGTCGTAAGGAGAAGATTCCTGGATTGTTGGAGTTGTATGAACAGAAATTAATGGATTCTAGAAGATGA

Coding sequence (CDS)

ATGTATAACTTGTTTCGCAGAATCATTCTACTTAGATCTCCATTGTCAGTCTTTTCTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATTCTTATCGACCTCTTCTGAGATTGCATCATCTCCGAAATCTGCTTCGTTGGCTTCGAATATTGTTCAGCTCAAGAACAAGCGGAAGGCTGTACTTGCGTTTTTTGGGAATCATGGATTCTCTGAATCACAAATCTCTGATCTTGTTAAGAAGGTCCCTCTAATTCTTTCTGCTAACCCCGAGACCCTATTTCCCATATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCCACGATAACCAAATTAGTATGTTCTGCTCCTCAAGTTTTAAATCGAAGTTTAAACCAAGAAATTATTCCAGTCTTTGATTACGTTCAAGCCATGCTTGGAACTGTGGAGAAGACTGTCGCTACCATAAAACGCTTTCCGTTTATTCTCGGTTGGAATCCTCGAATTTCAGTTGGTCCCAATATTGAACTTTTGAAACAAATTGGAGTGCCGGATTCAAATATTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCTTAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTCTCGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAGCATCCAGGGTGTATGGTATTGTCTGAGGATAATATTAATGATACAATGGATTTTTTTGTCAACAAAATGGAATGCGAATCATCTTCTGTTGCCAGAAGACCAACTTTATTTGCATTTAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTTTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAAAAACATAAGAATAATTTTTCGTTGTTTGAGTATCCTGAAAAGCGCTTCATAGAAAAAATCATAAACCGTCGTAAGGAGAAGATTCCTGGATTGTTGGAGTTGTATGAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRKAVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLMDSRR*

Homology

[Close]

BLAST of MELO3C006628 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 6.0e-76
Identity = 158/326 (48.47%), Postives = 217/326 (66.56%), Query Frame = 1


Query: 42  SPKSASLASNIVQLK--NKRKAVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPIL 101
           S K A  AS     +  +K  +VLAFF +HGFS+SQIS +VK +P +L+++P+ TL P L
Sbjct: 61  SHKDALSASKFFSFETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKL 120

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF SKG S P + K+V S P +L RSL  +IIP F++ +  L + E  +  IKRF  IL
Sbjct: 121 QFFYSKGASRPDVAKIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRFSRIL 180

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
            ++    V  NI  L++ GVP SNI   L  +P  F++    F+E +E V +MGFNP ++
Sbjct: 181 LFDLHTYVASNINALQEFGVPKSNIAGLLMNRPMAFMVRPNLFRENLEEVKKMGFNPSQM 240

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
           +F++A+ A+R+M KSTW++K++ Y++WG SEEEIRLAF K P CM  SED I  TMDFFV
Sbjct: 241 KFVIAIHAMRAMGKSTWERKIDAYKRWGWSEEEIRLAFIKLPRCMTHSEDKIMATMDFFV 300

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIE 341
           NKM  ESS +ARRP L   SL+KRI+PR  V QVLLSKGLIK   +   LFE  EK F+ 
Sbjct: 301 NKMGRESSLIARRPLLIPLSLEKRIIPRYSVIQVLLSKGLIKNDTSLVVLFESTEKMFLR 360

Query: 342 KIINRRKEKIPGLLELYEQKLMDSRR 365
           K +N  KE+ P L++LY++K+  S++
Sbjct: 361 KFVNGFKEEAPQLMKLYQEKINLSKK 386

[Close]

BLAST of MELO3C006628 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75
Identity = 157/321 (48.91%), Postives = 211/321 (65.73%), Query Frame = 1


Query: 42  SPKSASLASNIVQLKNKRK--AVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPIL 101
           S K+A  AS  +  K   K  +V AFF +HGFSESQ S +V+  P +L ++P+ +L   L
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF SKG S+P + K++ S P +L RSL  +IIP F++ +    + E T+AT+KRF  +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
             NP I V  NI  L++ GVP SNI   L  QPR F++    F+EI+E V +MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
           +F  AV A+  M+KSTW++K++ Y++WG SEE+I LAF K P CM+ SED I  TMDFFV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIE 341
           NKM  ESS +A RP L   SL+KRI+PR  V QVLLSKGLI K  +   LFE  EK F+E
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KIINRRKEKIPGLLELYEQKL 360
           K +N  KE+ P LL LY++K+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

[Close]

BLAST of MELO3C006628 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 8.2e-73
Identity = 147/321 (45.79%), Postives = 215/321 (66.98%), Query Frame = 1


Query: 42  SPKSASLASNIVQLK--NKRKAVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPIL 101
           S K A  AS  +  +   K  +VLAFF +HGFS++Q S +VK  P +L ++P+ TL P L
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF SKG S P + K+V S+P ++ RSL  ++IP +++ +  L + +  +  +KRF  IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
            ++    V  N+  L++ GVP SNI   L+ QP  F++    F+E +E V +MGFNP ++
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
           +F++AV A+R+  KS+W++K+++Y+ WG SEEEIRLAF K P CM+ SED I  TMDFFV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIE 341
           NKM  ESS +ARRP L + SL+KRI+PR  V QVLLSKGLI K  +  ++F+  EK F+ 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KIINRRKEKIPGLLELYEQKL 360
           K +N  KE+ P L++LY++K+
Sbjct: 364 KFVNVYKEEAPQLMKLYQEKI 384

[Close]

BLAST of MELO3C006628 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.1e-72
Identity = 148/316 (46.84%), Postives = 212/316 (67.09%), Query Frame = 1


Query: 42  SPKSASLASNIVQLKNKRK--AVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPIL 101
           S K A  AS +++ +   K  +VLAFF +HGFS+SQ S +VK +P +L+++P+ TL P L
Sbjct: 67  SHKDALSASKLLRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF SKG S P + K+V S P +L RSL  +IIP F++++  L + E  +  +KRF  IL
Sbjct: 127 QFFYSKGASKPDVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRFSRIL 186

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
            ++    V  N+  L++ GVP SNI   L Y+P  F+++   F++ +E V +MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMYRPMAFMVNPNLFRKNLEEVKKMGFNPSQM 246

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
           +F++A+ A+R+  +S W++K+++Y+KWG SEEEIRLAF K P CM+ SED I   MDFFV
Sbjct: 247 KFVLAIQAMRAGGESCWERKIDIYKKWGWSEEEIRLAFTKSPWCMIYSEDKIMAKMDFFV 306

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIE 341
           NKM  ESS +A RP L   SL+KRI+PR  V QVLLSKGLI K  +   LFE  EK F+E
Sbjct: 307 NKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFESTEKTFLE 366

Query: 342 KIINRRKEKIPGLLEL 355
           + +N  KE+ P L++L
Sbjct: 367 RFVNAYKEEAPQLIKL 382

[Close]

BLAST of MELO3C006628 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.9e-69
Identity = 151/325 (46.46%), Postives = 212/325 (65.23%), Query Frame = 1


Query: 42  SPKSASLASNIVQLK--NKRKAVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPIL 101
           S K A  AS  V  +  +K  +VLA F +HGFS++Q S +VKK P +L ++P+ TL P L
Sbjct: 448 SHKDARSASKYVHFETPDKPNSVLALFNSHGFSKTQTSKIVKKEPQLLLSDPDKTLLPKL 507

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF SKG S P I K+V  +P +L RSL  +IIP F++ +  L + +  +  +KRF  IL
Sbjct: 508 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDFLQSDKMAITVVKRFSRIL 567

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
            ++    V  N+  L++ GVP SNI   L  QP  F++    F+E +E V +MG NP ++
Sbjct: 568 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKKMGSNPSQM 627

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
           +F++A+ A+R+  KS+W++K+++Y++WG SEEEIRLAF K P CM+ SED I  TMDFFV
Sbjct: 628 KFVIAIQAIRAGGKSSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 687

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIE 341
           NKM  ESSS+ARRP L + SL+KRI+PR  V QVLLSKGLI K  +  ++F+  E  F+ 
Sbjct: 688 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLISKDFSLSAVFQSTEIMFLH 747

Query: 342 KIINRRKEKIPGLLEL--YEQKLMD 362
           K ++  KE+ P LL L   E KL D
Sbjct: 748 KFVDVYKEEAPQLLNLEHKEMKLND 772

HSP 2 Score: 275.8 bits (704), Expect = 7.6e-71
Identity = 149/321 (46.42%), Postives = 211/321 (65.73%), Query Frame = 1


Query: 42  SPKSASLASNIVQLKN--KRKAVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPIL 101
           S K A  AS  V  ++  K  +VLA F +HGFS++Q S + KK P +L ++P+ TL P L
Sbjct: 67  SHKDARSASKYVHFESPDKPNSVLALFNSHGFSKTQTSKIXKKEPQLLLSDPDKTLLPKL 126

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF SKG S P I K+V  +P +L RSL  +IIP F++ +  L + +  +  +KRF  IL
Sbjct: 127 QFFYSKGASWPDIAKIVVCSPSILKRSLENQIIPSFNFFKDXLQSDKMAITVVKRFSRIL 186

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
            ++    V  N+  L++ GVP SNI   L  QP  F++    F+E +E V  MGFNP ++
Sbjct: 187 LFDLHTYVASNMNALQEFGVPKSNIAGLLMNQPMAFMVRPNLFRENLEEVKXMGFNPSQM 246

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
           +F++A+ A+R+  K +W++K+++Y++WG SEEEIRLAF K P CM+ SED I  TMDFFV
Sbjct: 247 KFVIAIQAIRAGGKXSWERKIDIYKRWGWSEEEIRLAFTKSPWCMIYSEDKIMATMDFFV 306

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIE 341
           NKM  ESSS+ARRP L + SL+KRI+PR  V QVLLSKGLI K  +  ++F+  E  F+ 
Sbjct: 307 NKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLLSKGLINKDFSLSAVFQSTEIMFLH 366

Query: 342 KIINRRKEKIPGLLELYEQKL 360
           K ++  KE+ P LL LY++KL
Sbjct: 367 KFVDVYKEEAPQLLNLYQEKL 387

[Close]

BLAST of MELO3C006628 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 231.9 bits (590), Expect = 6.4e-61
Identity = 129/318 (40.57%), Postives = 201/318 (63.21%), Query Frame = 1


Query: 42  SPKSASLASNIVQLKNKRK--AVLAFFGNHGFSESQISDLVKKVPLILSANPET-LFPIL 101
           SP SA++AS  + L +  +   VL    +HGF+ +QIS LVKK P++L AN E+ L P L
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
            FF S G+S   + + + S P +L RSL  ++IP +++++++L + EK VA ++R  ++ 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
             +   ++ PNI  + + GVP+  I   L + P   +  +  F+ I ++  EMGFNPQ+ 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 222 QFLVAVFALRSM-TKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFF 281
            F++A+ AL     KS WDK  EVY++WG SE++I  AF+KHP CM+LSE  IN TM++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 282 VNKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFI 341
           VN+M     S+A+ P +  FSL+KRI+PR  V +VL+S GL+K+  +  SL    EK F+
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 342 EKIINRRKEKIPGLLELY 356
           EK++ + +E++P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of MELO3C006628 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46
Identity = 99/316 (31.33%), Postives = 184/316 (58.23%), Query Frame = 1


Query: 42  SPKSASLASNIVQLKNKRK--AVLAFFGNHGFSESQISDLVKKVPLILSANPETLF-PIL 101
           S +SA   S  V+L + +K  +VLA F +HGF+  QI+ ++K  P +LS +PE +  P L
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFIL 161
           +FF S G S+    K++ S+P++L+ SL++ +IP +D ++++L   E  V  +KR     
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 GWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRL 221
                  V   + + +++GVPD +I   +Q  P  F     RF E++ RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFV 281
            F+ A+ A    ++S  ++K ++++ +G S+E+   A  + P C+ +S++ I  T+++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHK-NNFSLFEYPEKRFI 341
           N +  ++  +  RP + + S++KRI PR  V  +LLSKGL+KK   N F++ +     F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 EKIINRRKEKIPGLLE 354
           +K + + ++++P L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of MELO3C006628 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 90/315 (28.57%), Postives = 171/315 (54.29%), Query Frame = 1


Query: 43  PKSASLASNIVQLKN--KRKAVLAFFGNHGFSESQISDLVKKVPLILSANPETLF-PILL 102
           P + ++A     LK+  + ++V+    ++ FS++QI   ++  P ++  N E +  P L 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATI--KRFPFI 162
           FF+  G +   + K V     V+  SL +++IP  + +++++    + +  I  +    +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LGWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQR 222
           L  +P + + PNI  L+  G+  S +   L+ QPR+F +S  + +  V R  ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFF 282
              + AV +L S+++ T+D+KV+++   G SE+EI    R+ PG +  SED +    +F+
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLI----KKHKNNFSLFEYPE 342
           + +M  E  ++A+RP + +++L+KR++PR  V Q+L  KGL+    KK KN   + E  E
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 343 KRFIEKIINRRKEKI 349
           + F+EK + R  ++I
Sbjct: 353 EAFLEKYVVRFGDEI 367

[Close]

BLAST of MELO3C006628 vs. TAIR10
Match: AT1G62010.1 (AT1G62010.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-24
Identity = 87/343 (25.36%), Postives = 161/343 (46.94%), Query Frame = 1


Query: 16  SVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRKAVLAFFGNHGFSESQ 75
           S  S+ FS +    +     + + +S   S  LA+ +   K    +VL    ++GF++SQ
Sbjct: 28  SFSSYSFSSASAADVSPKGETFKSSSFLDSLRLATKLTD-KGNSDSVLDLLRSYGFTDSQ 87

Query: 76  ISDLVKKVPLILSANPET-LFPILLFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVF 135
           IS +++    +L  N  T L   L F QS+G SS  +T++V + P++L +   + +   +
Sbjct: 88  ISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVSTVPKILGKREGKSLSRYY 147

Query: 136 DYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPDSNILKYL--QYQPR 195
           D+++ ++   + +    ++    L    +I    NI +L+++GVP   +L  L  + QP 
Sbjct: 148 DFIKVIIEADKSS--KYEKISHSLAQGNKIR---NILVLRELGVPQKRLLLLLISKSQP- 207

Query: 196 VFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEI 255
             +    +F   +++V EMGF+P    F+ A+  L  M+  T ++K+ VYR  G S +++
Sbjct: 208 --VCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDV 267

Query: 256 RLAFRKHPGCMVLSEDNINDTM-----------------------------------DFF 315
              F+K P  +  SE  + +++                                   +F 
Sbjct: 268 WAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRFPPCIGYSTEAVKKKTEFL 327

Query: 316 VNKMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIK 321
           V +M     +VA  P +  +SL+KR +PR  V +VL+SKGL++
Sbjct: 328 VKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLE 361

[Close]

BLAST of MELO3C006628 vs. TAIR10
Match: AT5G23930.1 (AT5G23930.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22
Identity = 68/228 (29.82%), Postives = 120/228 (52.63%), Query Frame = 1


Query: 44  KSASLASNIVQLKNKRKAVLAFFGNHGFSESQISDLVKKVPLILSANPE-TLFPILLFFQ 103
           +S S+ +N  + K    +VL    ++GF +SQIS ++   P  L  NPE TL   L F +
Sbjct: 73  ESISMKANFDE-KGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLK 132

Query: 104 SKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNP 163
             G SS  +T++V   P++L +   + I   +DYV+ +L   + + ++ KR         
Sbjct: 133 LNGASSSELTEIVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKR--------K 192

Query: 164 RISVGPNIELLKQIGVPDSNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLV 223
           + +   N+ +L+++GVP   +L  L  + +  +    RF+E V+++ EMGF+P+  +F+ 
Sbjct: 193 QTNRNRNVSVLRKLGVPQRLLLNLLISRAKP-VCGKERFEESVKKIVEMGFDPKSPKFVN 252

Query: 224 AVFALRSMTKSTWDKKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNI 271
           A++    ++  T ++KV  Y + GLS  E+   F+K P  +  SE NI
Sbjct: 253 ALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNI 290

HSP 2 Score: 68.2 bits (165), Expect = 1.2e-11
Identity = 33/119 (27.73%), Postives = 64/119 (53.78%), Query Frame = 1


Query: 237 KKVEVYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFA 296
           K V+ + + G +++E+ +  ++HP C+ L+ D++    +F V  M      VA  P +  
Sbjct: 327 KSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLG 386

Query: 297 FSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELY 356
           FSL+K +LPR  V + L+S GLI +     S+   P+ +F++  + + ++ +P L  ++
Sbjct: 387 FSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQDVLPELNSIF 445

HSP 3 Score: 58.5 bits (140), Expect = 9.7e-09
Identity = 81/376 (21.54%), Postives = 144/376 (38.30%), Query Frame = 1


Query: 21  GFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRKAVLAFFGNHGFSESQISDLV 80
           G  +S LK LR         SS  S      I   +   +A L F   +G S S+++++V
Sbjct: 85  GNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASSSELTEIV 144

Query: 81  KKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQVLNRSLNQEIIPVFDYVQAM 140
            KVP IL             +  + L     +       Q  NR+ N  ++      Q +
Sbjct: 145 SKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKRKQT-NRNRNVSVLRKLGVPQRL 204

Query: 141 LGTV----EKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPDSNILKYLQYQPRVFLI 200
           L  +     K V   +RF              +++ + ++G  D    K++      + +
Sbjct: 205 LLNLLISRAKPVCGKERFE------------ESVKKIVEMGF-DPKSPKFVNALYVFYEL 264

Query: 201 SSIRFKEIVERVTEMGFNPQRLQ--FLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEIRL 260
           S    +E V     +G +   +   F    F+L+   K+   +K E  ++ GL++EE+ L
Sbjct: 265 SDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNII-QKFETLKRVGLTKEEVCL 324

Query: 261 AFRKHPGCMVLSE-----------------------------------DNINDTMDFFVN 320
             +K+P C+  SE                                   D++    +F V 
Sbjct: 325 VVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVK 384

Query: 321 KMECESSSVARRPTLFAFSLKKRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEK 356
            M      VA  P +  FSL+K +LPR  V + L+S GLI +     S+   P+ +F++ 
Sbjct: 385 TMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKL 444

[Close]

BLAST of MELO3C006628 vs. NCBI nr
Match: gi|778678813|ref|XP_011651039.1| (PREDICTED: uncharacterized protein LOC101221269 isoform X1 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 6.5e-164
Identity = 298/361 (82.55%), Postives = 323/361 (89.47%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120
           A++AFF NHGFSESQISDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN RISVGPNIE+LKQ GVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240
           SNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALRS+TKS+WDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKIE 240

Query: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300
           VYRKWGLSEEE  LAFRK+P CM LSED INDTMDFF+NKM  ESS VARRP+L ++SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKK KN   LFE PEKRFIEK IN  KE++PGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 D 362
           +
Sbjct: 361 N 361

[Close]

BLAST of MELO3C006628 vs. NCBI nr
Match: gi|778678818|ref|XP_011651040.1| (PREDICTED: uncharacterized protein LOC101221269 isoform X2 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 6.5e-164
Identity = 298/361 (82.55%), Postives = 323/361 (89.47%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120
           A++AFF NHGFSESQISDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN RISVGPNIE+LKQ GVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWNLRISVGPNIEILKQFGVPD 180

Query: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240
           SNI  YLQ QP+VF  SSIRFKEIVERVTEMGFNPQRLQF+VAV ALRS+TKS+WDKK+E
Sbjct: 181 SNISTYLQRQPKVFSTSSIRFKEIVERVTEMGFNPQRLQFIVAVHALRSLTKSSWDKKIE 240

Query: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300
           VYRKWGLSEEE  LAFRK+P CM LSED INDTMDFF+NKM  ESS VARRP+L ++SLK
Sbjct: 241 VYRKWGLSEEEFYLAFRKYPWCMALSEDKINDTMDFFINKMGRESSLVARRPSLLSYSLK 300

Query: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKK KN   LFE PEKRFIEK IN  KE++PGLLELYEQKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKEKNLDLLFEPPEKRFIEKYINAHKEQVPGLLELYEQKLM 360

Query: 361 D 362
           +
Sbjct: 361 N 361

[Close]

BLAST of MELO3C006628 vs. NCBI nr
Match: gi|659076718|ref|XP_008438831.1| (PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo])

HSP 1 Score: 583.2 bits (1502), Expect = 3.2e-163
Identity = 298/364 (81.87%), Postives = 323/364 (88.74%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60
           MYNLFRRIILLRSP SV +HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILLRSPSSVCTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120
            V+AFF NHGFSESQISDLVKKVPLILSAN ETLFP+LLFF+SKGLSSP ITK VCSAPQ
Sbjct: 61  TVIAFFENHGFSESQISDLVKKVPLILSANTETLFPVLLFFKSKGLSSPEITKFVCSAPQ 120

Query: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180
           VL RSLNQEIIPVFDY+QA+LGTVEKTVATIKRF  ILGWN RISVGPNIE+L+Q GVPD
Sbjct: 121 VLKRSLNQEIIPVFDYIQAVLGTVEKTVATIKRFAGILGWNLRISVGPNIEILRQFGVPD 180

Query: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240
           SNI  YLQ QP++F ISSI+FKE+VERV EMGFNPQ+LQF+VAVFALRSMTKS+WDKKVE
Sbjct: 181 SNISFYLQRQPKMFSISSIQFKEVVERVMEMGFNPQQLQFVVAVFALRSMTKSSWDKKVE 240

Query: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300
           VYRKWGLSEEE  LAFR+HP CM  SED IN  MDFFVN++  ESS VARRP L + SLK
Sbjct: 241 VYRKWGLSEEEFSLAFRRHPLCMTFSEDKINGVMDFFVNEIGWESSFVARRPVLISLSLK 300

Query: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360
           KR+ PRG+VYQVLLSKGLIKKHK  + LFEYPE RFIEK IN  KE+IPGLLELY+QKLM
Sbjct: 301 KRLFPRGYVYQVLLSKGLIKKHKKLYLLFEYPEIRFIEKFINPHKEQIPGLLELYKQKLM 360

Query: 361 DSRR 365
           DSRR
Sbjct: 361 DSRR 364

[Close]

BLAST of MELO3C006628 vs. NCBI nr
Match: gi|778688492|ref|XP_011652761.1| (PREDICTED: uncharacterized protein LOC105435087 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 6.7e-161
Identity = 290/364 (79.67%), Postives = 319/364 (87.64%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60
           MYNLFRRIILLRSP SVFSHGFSE PLKSLR+LSTSSEI SSPKSASL SN+VQL N RK
Sbjct: 1   MYNLFRRIILLRSPSSVFSHGFSECPLKSLRYLSTSSEIVSSPKSASLPSNVVQLMNNRK 60

Query: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120
           A++AFF NHGFSESQISD VKKVPL+LS NPETLFPILLFFQSKGLSS  ITKLVCS PQ
Sbjct: 61  AIIAFFENHGFSESQISDFVKKVPLMLSENPETLFPILLFFQSKGLSSSAITKLVCSVPQ 120

Query: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180
           VL RSLNQEII VFDY+QA+LGTVEKTV TIKRFP ILGWN RISVGPNIE+LKQ+GVPD
Sbjct: 121 VLKRSLNQEIITVFDYIQAVLGTVEKTVTTIKRFPRILGWNLRISVGPNIEILKQLGVPD 180

Query: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240
           SNI  YLQ QP++F  SSI+FKEI+ERV EMGF+PQRLQFLVAVFALRS+TKS+WDKK+E
Sbjct: 181 SNISTYLQRQPKMFFTSSIQFKEIIERVMEMGFSPQRLQFLVAVFALRSLTKSSWDKKLE 240

Query: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300
           VYRKWGLSEE+ R+AFR++P C+  SED  N  MDFFVNK+ C+SS VAR+P L + SLK
Sbjct: 241 VYRKWGLSEEDFRIAFRRNPMCITFSEDKTNSVMDFFVNKIGCQSSFVARKPVLISLSLK 300

Query: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360
           KRI PRG+VYQVLLSKGLIKKHK    LFE PEKRFIEK IN  KE+IPGLLELYEQKLM
Sbjct: 301 KRIFPRGYVYQVLLSKGLIKKHKKIILLFESPEKRFIEKFINPHKEQIPGLLELYEQKLM 360

Query: 361 DSRR 365
           DSR+
Sbjct: 361 DSRK 364

[Close]

BLAST of MELO3C006628 vs. NCBI nr
Match: gi|778678821|ref|XP_011651041.1| (PREDICTED: uncharacterized protein LOC101221269 isoform X3 [Cucumis sativus])

HSP 1 Score: 570.1 bits (1468), Expect = 2.8e-159
Identity = 290/364 (79.67%), Postives = 324/364 (89.01%), Query Frame = 1


Query: 1   MYNLFRRIILLRSPLSVFSHGFSESPLKSLRFLSTSSEIASSPKSASLASNIVQLKNKRK 60
           MYNLFRRIIL  SP SVF+HGFSESPLKSLRFLSTSSEI SSPKSASLASN+VQLKN RK
Sbjct: 1   MYNLFRRIILPGSPSSVFTHGFSESPLKSLRFLSTSSEIVSSPKSASLASNVVQLKNNRK 60

Query: 61  AVLAFFGNHGFSESQISDLVKKVPLILSANPETLFPILLFFQSKGLSSPTITKLVCSAPQ 120
           A++AFF NHGFSESQISDL+KKVPLILSANPE LFPILLFF+SKGLSSP ITKLVC APQ
Sbjct: 61  AIIAFFENHGFSESQISDLIKKVPLILSANPEILFPILLFFKSKGLSSPAITKLVCFAPQ 120

Query: 121 VLNRSLNQEIIPVFDYVQAMLGTVEKTVATIKRFPFILGWNPRISVGPNIELLKQIGVPD 180
           +L RSLNQEIIP FDY+QA+LGTVEKTVATIKRFP ILGWN  +SVGPNIE+LKQIGVPD
Sbjct: 121 ILKRSLNQEIIPFFDYIQAVLGTVEKTVATIKRFPRILGWN--LSVGPNIEILKQIGVPD 180

Query: 181 SNILKYLQYQPRVFLISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRSMTKSTWDKKVE 240
           SNI  YLQ QP++FL SSIRFKE VERVTEMGFNPQ++QF+VAVF LR+MTKST DKKVE
Sbjct: 181 SNISSYLQQQPKMFLTSSIRFKEAVERVTEMGFNPQQMQFVVAVFCLRAMTKSTLDKKVE 240

Query: 241 VYRKWGLSEEEIRLAFRKHPGCMVLSEDNINDTMDFFVNKMECESSSVARRPTLFAFSLK 300
           VYRKWGLSEEEIRLAF+K+P CM++SED IN  MD+FVNK+ C+SS VARRP L  +SLK
Sbjct: 241 VYRKWGLSEEEIRLAFKKNPWCMMISEDKINGAMDYFVNKIGCQSSYVARRPGLTLYSLK 300

Query: 301 KRILPRGFVYQVLLSKGLIKKHKNNFSLFEYPEKRFIEKIINRRKEKIPGLLELYEQKLM 360
           KR+LPRG++YQVLLSKGLIKKH+   SLF   E RFI+K IN  KE+IPGLLELY+++LM
Sbjct: 301 KRLLPRGYIYQVLLSKGLIKKHEYLSSLFNSSENRFIKKFINPHKEQIPGLLELYKERLM 360

Query: 361 DSRR 365
           DSRR
Sbjct: 361 DSRR 362

The following BLAST results are available for this feature:

BLAST of MELO3C006628 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HDG3_VITVI	6.0e-76	48.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=...	[more]
A5B1K5_VITVI	1.3e-75	48.91	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1	[more]
A5C3Y0_VITVI	8.2e-73	45.79	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1	[more]
F6HDG2_VITVI	1.1e-72	46.84	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]
F6HDG2_VITVI	1.9e-69	46.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=...	[more]

BLAST of MELO3C006628 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	6.4e-61	40.57	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.5e-46	31.33	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.2e-35	28.57	Mitochondrial transcription termination factor family protein	[more]
AT1G62010.1	6.3e-24	25.36	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	1.5e-22	29.82	Mitochondrial transcription termination factor family protein	[more]

BLAST of MELO3C006628 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778678813\|ref\|XP_011651039.1\|	6.5e-164	82.55	PREDICTED: uncharacterized protein LOC101221269 isoform X1 [Cucumis sativus]	[more]
gi\|778678818\|ref\|XP_011651040.1\|	6.5e-164	82.55	PREDICTED: uncharacterized protein LOC101221269 isoform X2 [Cucumis sativus]	[more]
gi\|659076718\|ref\|XP_008438831.1\|	3.2e-163	81.87	PREDICTED: uncharacterized protein LOC103483817 [Cucumis melo]	[more]
gi\|778688492\|ref\|XP_011652761.1\|	6.7e-161	79.67	PREDICTED: uncharacterized protein LOC105435087 [Cucumis sativus]	[more]
gi\|778678821\|ref\|XP_011651041.1\|	2.8e-159	79.67	PREDICTED: uncharacterized protein LOC101221269 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003690	double-stranded DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU62433	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006628T1	MELO3C006628T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62433	MU62433	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 232..336 score: 7.4E-17coord: 63..221 score: 2.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 112..143 score: 0.31coord: 148..179 score: 120.0coord: 253..284 score: 5.3coord: 77..107 score: 2.5coord: 184..214 score: 610.0coord: 285..319 score:
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..359 score: 5.4E
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 42..359 score: 5.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006628	Cla021722	Watermelon (97103) v1	mewmB461
MELO3C006628	Cla009320	Watermelon (97103) v1	mewmB486
MELO3C006628	ClCG06G005290	Watermelon (Charleston Gray)	mewcgB442
MELO3C006628	ClCG05G005950	Watermelon (Charleston Gray)	mewcgB427
MELO3C006628	Cla97C05G087430	Watermelon (97103) v2	mewmbB434
MELO3C006628	Cla97C06G114790	Watermelon (97103) v2	mewmbB448
MELO3C006628	Bhi12G001849	Wax gourd	mewgoB521
MELO3C006628	Bhi01G000696	Wax gourd	mewgoB529
MELO3C006628	CSPI03G14130	Wild cucumber (PI 183967)	cpimeB230
MELO3C006628	CmaCh14G016330	Cucurbita maxima (Rimu)	cmameB242
MELO3C006628	CmaCh06G014840	Cucurbita maxima (Rimu)	cmameB763
MELO3C006628	CmaCh08G012150	Cucurbita maxima (Rimu)	cmameB850
MELO3C006628	CmoCh14G016700	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006628	Lsi05G015220	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006628	Lsi09G014130	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006628	CsGy3G014250	Cucumber (Gy14) v2	cgybmeB200
MELO3C006628	Carg15965	Silver-seed gourd	carmeB0332
MELO3C006628	CsaV3_3G014350	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006628	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006628	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006628	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006628	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006628	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006628	Silver-seed gourd	carmeB0610
MELO3C006628	Silver-seed gourd	carmeB0828
MELO3C006628	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006628	Melon (DHL92) v3.5.1	memeB051
MELO3C006628	Cucumber (Gy14) v1	cgymeB307
MELO3C006628	Cucumber (Gy14) v1	cgymeB439
MELO3C006628	Cucurbita maxima (Rimu)	cmameB342
MELO3C006628	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006628	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006628	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006628	Wild cucumber (PI 183967)	cpimeB501
MELO3C006628	Cucumber (Chinese Long) v2	cumeB236
MELO3C006628	Cucumber (Chinese Long) v2	cumeB499