MELO3C006612 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006612
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Putative basic-helix-loop-helix transcription factor
Location	chr6 : 4581172 .. 4581892 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTGCTCCGACTCTGTGGTTCCACTGTTCCCCCTCATTTTGCCGATACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCGAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGTGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGTTAGTGGATGATGGATTTGATTCTCGCTTAAGAATAGAATCTGGCTATACTTATTGTAGGTACAGTTTGTGTTCGTTGTTTTAATTAATTCTGTTTTGATGCTGAAATAATCAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCCGTGACGCTGCTTCCGAATTCCAATTCGGATTCATCAGGCGGCAATGGCGACGGCGTCATTGTCTCAATCTCCGGTAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTCCAACGAGGTATGGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGACTGAAGTTCTTGCAGCAAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCATCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAACGATATTCTAAGCTTAAAGAAGTAA

mRNA sequence

ATGGAAGCCTGCTCCGACTCTGTGGTTCCACTGTTCCCCCTCATTTTGCCGATACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCGAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGTGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCCGTGACGCTGCTTCCGAATTCCAATTCGGATTCATCAGGCGGCAATGGCGACGGCGTCATTGTCTCAATCTCCGGTAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTCCAACGAGGTATGGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGACTGAAGTTCTTGCAGCAAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCATCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAACGATATTCTAAGCTTAAAGAAGTAA

Coding sequence (CDS)

ATGGAAGCCTGCTCCGACTCTGTGGTTCCACTGTTCCCCCTCATTTTGCCGATACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCGAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGTGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCCGTGACGCTGCTTCCGAATTCCAATTCGGATTCATCAGGCGGCAATGGCGACGGCGTCATTGTCTCAATCTCCGGTAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTCCAACGAGGTATGGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGACTGAAGTTCTTGCAGCAAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCATCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAACGATATTCTAAGCTTAAAGAAGTAA

Protein sequence

MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGNGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK*

Homology

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BLAST of MELO3C006612 vs. Swiss-Prot
Match: BH095_ARATH (Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 5.2e-06
Identity = 32/92 (34.78%), Postives = 49/92 (53.26%), Query Frame = 1


Query: 48  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK-----KS 107
           E+E+RK+M + F  L +L+P L PKA + TIV  A+  I+ L++ L +LEM+K      S
Sbjct: 78  ERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYS 137

Query: 108 SESVTLLPNSN---SDSSGGNGDGVIVSISGN 132
           S S    P +    + SS  +   ++  IS +
Sbjct: 138 SASTNTTPTTTFAYAPSSSSSPTALLTPISNH 169

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BLAST of MELO3C006612 vs. TrEMBL
Match: A0A0A0L5R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151510 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.4e-100
Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGG- 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV LLPN+NSDSSGG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILSLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

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BLAST of MELO3C006612 vs. TrEMBL
Match: A0A061EPZ0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021144 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.5e-31
Identity = 90/207 (43.48%), Postives = 130/207 (62.80%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEAT--EKEASASRKRCRALEANGGVQ--KKEKEKRKEMS 60
           ME  +D ++P      P     A   E++ S+SR+R RA EA    +  KKE+++R++M+
Sbjct: 37  MEGYNDKLIPPLSQFSPSRQAAAAIVEEKGSSSRERGRAKEAKEVTESLKKERDRREKMA 96

Query: 61  ESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSES----VTLLPNS 120
           E++D+L+S+VPNL PKATRE IV   I +I+ L+K++ R+E  K SSES    + L  N 
Sbjct: 97  ENYDLLQSMVPNLFPKATREMIVGETIAYIQSLEKEITRMEELKNSSESSKGKMHLYSNR 156

Query: 121 NSDSSGGNGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGN 180
           NS         + V++S N+V FG I + V+  +VT I +V  +HK EVL ANV V+H  
Sbjct: 157 NS--------SIDVTVSSNVVFFG-IQSMVRPRLVTDIFMVLHKHKAEVLGANVAVNHRQ 216

Query: 181 LTLTVTASVHGYVENTIEQIRNDILSL 200
           LTLTVTA V+G  + TIE+I+ DIL L
Sbjct: 217 LTLTVTAVVNGNRDRTIEKIKGDILIL 234

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BLAST of MELO3C006612 vs. TrEMBL
Match: W9RQ46_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008473 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 82/212 (38.68%), Postives = 122/212 (57.55%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEATEKEA----------SASRKR--CRALEANGGVQKKE 60
           ME  SDSV+P      P+ HF++   E+          S+ RKR   R          +E
Sbjct: 30  MEGYSDSVIP------PLSHFQSPRSESAINVVAEYNSSSKRKRENIRPKPPKEDCLGRE 89

Query: 61  KEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTL 120
           +++R +M+ESF +L S+VP+L PK+++E ++    ++I++L+++   LE  K+SS S   
Sbjct: 90  RDRRVKMNESFALLESIVPSLLPKSSKEKVLQTTTEYIKYLEEKKKMLEKLKESSRSPMA 149

Query: 121 LPNSNSDSSGGNGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVV 180
              S           V V+  G++ LFG I +  + G VTQI +VF++H+ EVLAANVVV
Sbjct: 150 ATRSLVFPCTSRNSSVTVTACGSVALFG-IESRKRHGFVTQIFMVFQKHRAEVLAANVVV 209

Query: 181 SHGNLTLTVTASVHGYVENTIEQIRNDILSLK 201
           + G LTLTVTA V+G    TIE I+ DIL LK
Sbjct: 210 NDGLLTLTVTAFVNGDESTTIEGIKRDILMLK 234

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BLAST of MELO3C006612 vs. TrEMBL
Match: A0A0S3R8Y3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G526400 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-21
Identity = 75/206 (36.41%), Postives = 116/206 (56.31%), Query Frame = 1


Query: 2   EACSDSVVPLFPLILP-----IHHFEATEKEASA-SRKRC-RALEANGGVQKKEKEKRKE 61
           E  + S +P F  I P     +H     E  A+  SRKR  R   +N G    E+E+R +
Sbjct: 9   ETETHSTMPPFSQIPPSSSSFLHPSTIAEATANTTSRKRVKRTSHSNCGSVNMERERRSK 68

Query: 62  MSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNS 121
           M++ F  L++ VP L P+ATRE I++  I +I+ L+K+  RLE  KK  E++  +  S  
Sbjct: 69  MTQMFTQLQTSVPGLLPQATREVIINETIGYIKELEKKKQRLEELKKLKETMKGVEGSTV 128

Query: 122 DSSGGNGD-GVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNL 181
           +    N +  ++V++S N+  FG I    + G+VTQIL VF  H+ E+LAANV V++G L
Sbjct: 129 ECGNNNRNCSLVVTVSDNVAFFG-IQWMPRPGLVTQILKVFCNHQAEILAANVTVNNGKL 188

Query: 182 TLTVTASVHGYVENTIEQIRNDILSL 200
            L +TA V       +E+I+ +I+ L
Sbjct: 189 ILAITALVQNNGNCVVEKIKREIMGL 213

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BLAST of MELO3C006612 vs. TrEMBL
Match: V7CAD8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G101300g PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18
Identity = 64/177 (36.16%), Postives = 103/177 (58.19%), Query Frame = 1


Query: 29  SASRKRCRALEANGGVQKK--EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFI 88
           + SRKR + +      Q    E+E+R +M++ F  L++ VP L P+ATRE I++  I +I
Sbjct: 41  TTSRKRVKRIMGQTNCQSLNIERERRSKMTQMFTQLQTSVPGLLPQATREVIINETIGYI 100

Query: 89  EFLQKQLMRLEMEKKS----SESVTLLPNSNSDSSGGNGDGVIVSISGNIVLFGVIIASV 148
           + L+K+  RLE  K++     ES     NSN + S      ++V++S N+  FG+     
Sbjct: 101 KELEKKKQRLEELKETMKGVEESAVECGNSNRNCS------IMVTVSANVAFFGIQWVP- 160

Query: 149 QRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILSL 200
           + G+VTQIL VF  H+ ++LAANV V++G L L +TA V    +  +E I+ +I+ L
Sbjct: 161 RPGLVTQILKVFCNHQADILAANVSVNNGKLILAITALVQNNGKCVVENIKREIMGL 210

[Close]

BLAST of MELO3C006612 vs. TAIR10
Match: AT1G49770.1 (AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-07
Identity = 32/92 (34.78%), Postives = 49/92 (53.26%), Query Frame = 1


Query: 48  EKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEK-----KS 107
           E+E+RK+M + F  L +L+P L PKA + TIV  A+  I+ L++ L +LEM+K      S
Sbjct: 78  ERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYS 137

Query: 108 SESVTLLPNSN---SDSSGGNGDGVIVSISGN 132
           S S    P +    + SS  +   ++  IS +
Sbjct: 138 SASTNTTPTTTFAYAPSSSSSPTALLTPISNH 169

[Close]

BLAST of MELO3C006612 vs. TAIR10
Match: AT3G24140.1 (AT3G24140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-06
Identity = 29/86 (33.72%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 24  TEKEASASRKRCRALEANGGVQKK-------EKEKRKEMSESFDVLRSLVP-NLSPKATR 83
           T+KE  + RKR R  + +  V+ +       E+ +RK+M+E   VLRSL+P +   +  +
Sbjct: 172 TKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQ 231

Query: 84  ETIVSGAIQFIEFLQKQLMRLEMEKK 102
            +I+ GAI+F+  L++ L  LE +K+
Sbjct: 232 ASIIGGAIEFVRELEQLLQCLESQKR 257

[Close]

BLAST of MELO3C006612 vs. TAIR10
Match: AT1G01260.1 (AT1G01260.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-06
Identity = 47/186 (25.27%), Postives = 89/186 (47.85%), Query Frame = 1


Query: 23  ATEKEASASRKRCRALEANGGVQ-----KKEKEKRKEMSESFDVLRSLVPNLSPKATRET 82
           A E   +  RKR R   ANG  +     + E+++R+++++ F  LRS+VPN+S K  + +
Sbjct: 409 ADESGNNRPRKRGRR-PANGRAEALNHVEAERQRREKLNQRFYALRSVVPNIS-KMDKAS 468

Query: 83  IVSGAIQFIEFLQKQLMRLEMEKK-----SSESVTLLPNSNSDSSGGNGDGVIVSISGNI 142
           ++  A+ +I  L  +L  +E E++     S+  ++L  + N  +S   G+ V V I+   
Sbjct: 469 LLGDAVSYINELHAKLKVMEAERERLGYSSNPPISLDSDINVQTS---GEDVTVRIN--- 528

Query: 143 VLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTASVHGYVENTIEQI 199
                    ++    ++I   FE  K EV+ +N+ VS   +       +H +V  + E  
Sbjct: 529 -------CPLESHPASRIFHAFEESKVEVINSNLEVSQDTV-------LHTFVVKSEELT 572

[Close]

BLAST of MELO3C006612 vs. TAIR10
Match: AT5G46690.1 (AT5G46690.1 beta HLH protein 71)

HSP 1 Score: 47.8 bits (112), Expect = 9.5e-06
Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 1


Query: 48  EKEKRKEMSESFDVLRSLVPN-LSPKATRETIVSGAIQFIEFLQKQLMRLEMEK----KS 107
           E+ +R++M++   VLRSL+P   + K  + +IV GAI FI+ L+ +L+ LE +K    K 
Sbjct: 94  ERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHHNAKL 153

Query: 108 SESVTLLPNSNSDSSG 119
           ++SVT   +++ DS+G
Sbjct: 154 NQSVT--SSTSQDSNG 167

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BLAST of MELO3C006612 vs. NCBI nr
Match: gi|659076675|ref|XP_008438808.1| (PREDICTED: transcription factor bHLH95-like [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 9.3e-104
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN 120

Query: 121 GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS 180
           GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS
Sbjct: 121 GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS 180

Query: 181 VHGYVENTIEQIRNDILSLKK 202
           VHGYVENTIEQIRNDILSLKK
Sbjct: 181 VHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of MELO3C006612 vs. NCBI nr
Match: gi|449432807|ref|XP_004134190.1| (PREDICTED: transcription factor bHLH95-like [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-99
Identity = 194/202 (96.04%), Postives = 198/202 (98.02%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGG- 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV LLPN+NSDSSGG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILSLKK 202
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]

BLAST of MELO3C006612 vs. NCBI nr
Match: gi|590660785|ref|XP_007035491.1| (Uncharacterized protein TCM_021144 [Theobroma cacao])

HSP 1 Score: 143.7 bits (361), Expect = 3.6e-31
Identity = 90/207 (43.48%), Postives = 130/207 (62.80%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEAT--EKEASASRKRCRALEANGGVQ--KKEKEKRKEMS 60
           ME  +D ++P      P     A   E++ S+SR+R RA EA    +  KKE+++R++M+
Sbjct: 37  MEGYNDKLIPPLSQFSPSRQAAAAIVEEKGSSSRERGRAKEAKEVTESLKKERDRREKMA 96

Query: 61  ESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSES----VTLLPNS 120
           E++D+L+S+VPNL PKATRE IV   I +I+ L+K++ R+E  K SSES    + L  N 
Sbjct: 97  ENYDLLQSMVPNLFPKATREMIVGETIAYIQSLEKEITRMEELKNSSESSKGKMHLYSNR 156

Query: 121 NSDSSGGNGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGN 180
           NS         + V++S N+V FG I + V+  +VT I +V  +HK EVL ANV V+H  
Sbjct: 157 NS--------SIDVTVSSNVVFFG-IQSMVRPRLVTDIFMVLHKHKAEVLGANVAVNHRQ 216

Query: 181 LTLTVTASVHGYVENTIEQIRNDILSL 200
           LTLTVTA V+G  + TIE+I+ DIL L
Sbjct: 217 LTLTVTAVVNGNRDRTIEKIKGDILIL 234

[Close]

BLAST of MELO3C006612 vs. NCBI nr
Match: gi|703132051|ref|XP_010105032.1| (hypothetical protein L484_008473 [Morus notabilis])

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 82/212 (38.68%), Postives = 122/212 (57.55%), Query Frame = 1


Query: 1   MEACSDSVVPLFPLILPIHHFEATEKEA----------SASRKR--CRALEANGGVQKKE 60
           ME  SDSV+P      P+ HF++   E+          S+ RKR   R          +E
Sbjct: 30  MEGYSDSVIP------PLSHFQSPRSESAINVVAEYNSSSKRKRENIRPKPPKEDCLGRE 89

Query: 61  KEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTL 120
           +++R +M+ESF +L S+VP+L PK+++E ++    ++I++L+++   LE  K+SS S   
Sbjct: 90  RDRRVKMNESFALLESIVPSLLPKSSKEKVLQTTTEYIKYLEEKKKMLEKLKESSRSPMA 149

Query: 121 LPNSNSDSSGGNGDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVV 180
              S           V V+  G++ LFG I +  + G VTQI +VF++H+ EVLAANVVV
Sbjct: 150 ATRSLVFPCTSRNSSVTVTACGSVALFG-IESRKRHGFVTQIFMVFQKHRAEVLAANVVV 209

Query: 181 SHGNLTLTVTASVHGYVENTIEQIRNDILSLK 201
           + G LTLTVTA V+G    TIE I+ DIL LK
Sbjct: 210 NDGLLTLTVTAFVNGDESTTIEGIKRDILMLK 234

[Close]

BLAST of MELO3C006612 vs. NCBI nr
Match: gi|731388880|ref|XP_010649780.1| (PREDICTED: basic helix-loop-helix protein A-like [Vitis vinifera])

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 73/176 (41.48%), Postives = 110/176 (62.50%), Query Frame = 1


Query: 29  SASRKRCRALEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEF 88
           S SRKR R  EA    Q+ E+ +R++MS+ + +L+++VP L PKATR  I+S   ++I+ 
Sbjct: 43  STSRKRTRT-EAG---QETERGRREKMSDMYALLQTMVPTLFPKATRVKIISETAEYIKE 102

Query: 89  LQKQLMRLEMEKKSSESVTLLPN-----SNSDSSGGNGDGVIVSISGNIVLFGVIIASVQ 148
           L+++  RLE  KKS  +V   P      SN DSS      + V++SGN+  FG+     +
Sbjct: 103 LERRRDRLEEMKKSIGAVAATPILVSQCSNPDSS------LRVTVSGNVAFFGIQSVRAR 162

Query: 149 RGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILSL 200
           RG+ TQI++VFE+H+ +V AANV V+HG L +TVTA V    +  I++I  DI +L
Sbjct: 163 RGLATQIIMVFEKHEAQVFAANVAVNHGLLMVTVTAFVGNNGDGVIDKIIRDIRNL 208

The following BLAST results are available for this feature:

BLAST of MELO3C006612 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH095_ARATH	5.2e-06	34.78	Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2	[more]

BLAST of MELO3C006612 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R7_CUCSA	7.4e-100	96.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151510 PE=4 SV=1	[more]
A0A061EPZ0_THECC	2.5e-31	43.48	Uncharacterized protein OS=Theobroma cacao GN=TCM_021144 PE=4 SV=1	[more]
W9RQ46_9ROSA	1.1e-26	38.68	Uncharacterized protein OS=Morus notabilis GN=L484_008473 PE=4 SV=1	[more]
A0A0S3R8Y3_PHAAN	3.1e-21	36.41	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G526400 PE=...	[more]
V7CAD8_PHAVU	1.9e-18	36.16	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G101300g PE=4 SV=1	[more]

BLAST of MELO3C006612 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G49770.1	2.9e-07	34.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G24140.1	1.5e-06	33.72	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G01260.1	5.6e-06	25.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46690.1	9.5e-06	38.16	beta HLH protein 71	[more]

BLAST of MELO3C006612 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076675\|ref\|XP_008438808.1\|	9.3e-104	100.00	PREDICTED: transcription factor bHLH95-like [Cucumis melo]	[more]
gi\|449432807\|ref\|XP_004134190.1\|	1.1e-99	96.04	PREDICTED: transcription factor bHLH95-like [Cucumis sativus]	[more]
gi\|590660785\|ref\|XP_007035491.1\|	3.6e-31	43.48	Uncharacterized protein TCM_021144 [Theobroma cacao]	[more]
gi\|703132051\|ref\|XP_010105032.1\|	1.6e-26	38.68	hypothetical protein L484_008473 [Morus notabilis]	[more]
gi\|731388880\|ref\|XP_010649780.1\|	2.8e-23	41.48	PREDICTED: basic helix-loop-helix protein A-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006612T1	MELO3C006612T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 48..103 score: 8.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 46..90 score: 4.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 47..95 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 39..89 score: 10
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 47..102 score: 5.5
None	No IPR available	unknown	Coil	Coil	coord: 21..41 score: -coord: 86..106 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006612	Csa3G151510	Cucumber (Chinese Long) v2	cumeB236
MELO3C006612	Cla021708	Watermelon (97103) v1	mewmB461
MELO3C006612	ClCG05G005840	Watermelon (Charleston Gray)	mewcgB427
MELO3C006612	Cla97C05G087280	Watermelon (97103) v2	mewmbB434
MELO3C006612	Bhi01G000681	Wax gourd	mewgoB529
MELO3C006612	CSPI03G13970	Wild cucumber (PI 183967)	cpimeB230
MELO3C006612	Cucsa.253520	Cucumber (Gy14) v1	cgymeB439
MELO3C006612	CmoCh14G016810	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006612	Lsi05G015070	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006612	Cp4.1LG03g11240	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006612	CsGy3G014090	Cucumber (Gy14) v2	cgybmeB200
MELO3C006612	Carg20133	Silver-seed gourd	carmeB0828
MELO3C006612	CsaV3_3G014190	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006612	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006612	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006612	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006612	Wild cucumber (PI 183967)	cpimeB498
MELO3C006612	Wild cucumber (PI 183967)	cpimeB501
MELO3C006612	Cucumber (Chinese Long) v2	cumeB496
MELO3C006612	Cucumber (Chinese Long) v2	cumeB499
MELO3C006612	Watermelon (Charleston Gray)	mewcgB442
MELO3C006612	Watermelon (97103) v1	mewmB486
MELO3C006612	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006612	Cucurbita pepo (Zucchini)	cpemeB144
MELO3C006612	Cucurbita pepo (Zucchini)	cpemeB314
MELO3C006612	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006612	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006612	Cucumber (Gy14) v2	cgybmeB437
MELO3C006612	Silver-seed gourd	carmeB0332
MELO3C006612	Silver-seed gourd	carmeB0610
MELO3C006612	Cucumber (Chinese Long) v3	cucmeB508
MELO3C006612	Cucumber (Chinese Long) v3	cucmeB510
MELO3C006612	Watermelon (97103) v2	mewmbB448
MELO3C006612	Wax gourd	mewgoB521
MELO3C006612	Melon (DHL92) v3.5.1	memeB051
MELO3C006612	Cucumber (Gy14) v1	cgymeB307
MELO3C006612	Cucumber (Gy14) v1	cgymeB595
MELO3C006612	Cucurbita maxima (Rimu)	cmameB242
MELO3C006612	Cucurbita maxima (Rimu)	cmameB342
MELO3C006612	Cucurbita maxima (Rimu)	cmameB763
MELO3C006612	Cucurbita maxima (Rimu)	cmameB850