CsaV3_3G014190 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G014190
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptiontranscription factor bHLH95-like
Locationchr3 : 10642450 .. 10643959 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCATTAATTTGTTTCCATTTTTAAAATATTTTTTACGGTAGCGGTGGAAAAAGAAAAAGAAAAGACAGAGAGTACGTCGGGGGGAAATGATAACAGAAAAATTACAATCGCAAGAAAGATTACAAAGAGAATTAGCGATTCCAAAGTGTAAAATCGGTAGTTTTTTTTTTGGAATATTTTCAATCATTTTCTTCTTCCATTTCTGAATTTGATCGATCTCTCTCTCTCTCCCACGCACATTGTTCTATCCTTCTTATTGCTTCATAAAAAGCTTCATCAATGGCGGATTAAAGAAACAAACCAACAACAGAAGATCAGCAAGCTTCTGTTTGTACTAATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGTTAGTGGATGGTGGATTTGATTCTTGCATGCTTTAGTATAGAATCTGGATATACCTGTTGTAGGTACATTTTGTATTCGTAGTTTTAATTAATTCTGTTTTGATGCTGAAATAATCAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAGGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAATAACTTCCATTATATTCACGAGATTCTTCCCTCTTTATTTACTATGATAGGGATGTTTAACACTTTTACAGAACTAGAAACTGAACGAATACAATACATTGGTAATATATATTTTGTCTTTTGCTTCAAATTCATGTTATTATTGAATATTTGTTAAAAGATCAAGTTGGCTTCACCTTTTGATTCTAAATATAATTCTTATTTGCAAGATAAAAACATCTCTCTCTCTCTCTCTCTGCTGTTTCTGTTTTTAGTACAACAATTGGTAGATGATCACGAATGAACCATCAACTTTTAATTTAGGATGATAATTGGTATCTTTTCTAATGAACTAACTCAATCAGATTATCTTCTCTACGTGGGTTATTTTGGTGAAATAGTTATATTAATGAGTTTATGTGAATGCACCTTTTGCTTTTGATCAAGTATCACTCCCTCCCTCT

mRNA sequence

ATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAGGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAA

Coding sequence (CDS)

ATGGAAGCCTGTTCCGACTCTGTGATTCCACTTTTCCCCCTCATTTTGCCGGTACATCACTTTGAAGCCACTGAAAAGGAGGCTTCGGCCTCAAGGAAGCGTTGCAGAGCTCTGGAAGCCAACGGCGGAGTACAGAAGAAAGAGAAGGAGAAAAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCGATCTCTCGTTCCGAATCTCTCTCCTAAGGCTACGAGAGAGACTATTGTTTCTGGAGCGATTCAGTTCATCGAGTTTCTTCAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAATCATCGGAATCGGTGGCGCTGCTTCCGAATACCAATTCGGATTCATCAGGCGGCATTAATGGCGACGGCGTCATTGTCTCAATCTCCGGCAACATTGTGTTGTTTGGGGTTATTATTGCTTCTGTTCAACGAGGTATTGTGACACAGATTTTACTGGTGTTTGAAAGACACAAGGCTGAAGTTCTTGCAGCGAATGTTGTAGTCAGCCATGGAAATTTAACTTTAACAGTCACAGCTTCTGTACACGGTTACGTAGAGAATACCATAGAGCAGATTAGAAATGATATCCTAGGCTTAAAGAAGTAA

Protein sequence

MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTASVHGYVENTIEQIRNDILGLKK
Homology
[Close]
BLAST of CsaV3_3G014190 vs. NCBI nr
Match: XP_004134190.1 (PREDICTED: transcription factor bHLH95-like [Cucumis sativus] >KGN57073.1 hypothetical protein Csa_3G151510 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 1.1e-100
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 203
           SVHGYVENTIEQIRNDILGLKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]
BLAST of CsaV3_3G014190 vs. NCBI nr
Match: XP_016898986.1 (PREDICTED: transcription factor bHLH95-like [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80
Identity = 172/202 (85.15%), Postives = 175/202 (86.63%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEME                     
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEME-XXXXXXXXXXXXXXXXXXXX 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
               VIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 XXXXVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 203
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 201

[Close]
BLAST of CsaV3_3G014190 vs. NCBI nr
Match: XP_022955986.1 (uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 uncharacterized protein LOC111457838 isoform X1 [Cucurbita moschata])

HSP 1 Score: 294.3 bits (752), Expect = 3.2e-76
Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGG- 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
              GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTA
Sbjct: 121 ---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 203
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 198

[Close]
BLAST of CsaV3_3G014190 vs. NCBI nr
Match: XP_023528352.1 (uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-76
Identity = 161/202 (79.70%), Postives = 177/202 (87.62%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQL RLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLTRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           +G GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTA
Sbjct: 121 DG-GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 203
           S+HGYVENTIEQIRNDIL LKK
Sbjct: 181 SIHGYVENTIEQIRNDILSLKK 201

[Close]
BLAST of CsaV3_3G014190 vs. NCBI nr
Match: XP_022979931.1 (uncharacterized protein LOC111479473 [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 6.1e-75
Identity = 160/203 (78.82%), Postives = 175/203 (86.21%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGG Q+K +EKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGG- 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 INGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVT 180
               GVIVS+S NIVLFG+I ASV+RG+VT+IL+ FERH+AEVLAANV VSHGNLTLTVT
Sbjct: 121 XXXXGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHGYVENTIEQIRNDILGLKK 203
           ASVHGYVENTIEQIRNDIL LKK
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]
BLAST of CsaV3_3G014190 vs. TAIR10
Match: AT5G46690.1 (beta HLH protein 71)

HSP 1 Score: 43.5 bits (101), Expect = 1.8e-04
Identity = 26/74 (35.14%), Postives = 48/74 (64.86%), Query Frame = 0 

Query: 48  EKEKRKEMSESFDVLRSLVPN-LSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESV 107
           E+ +R++M++   VLRSL+P   + K  + +IV GAI FI+ L+ +L+ LE +K  +  +
Sbjct: 94  ERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHHNAKL 153

Query: 108 --ALLPNTNSDSSG 119
             ++  +T+ DS+G
Sbjct: 154 NQSVTSSTSQDSNG 167

[Close]
BLAST of CsaV3_3G014190 vs. TrEMBL
Match: tr|A0A0A0L5R7|A0A0A0L5R7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 7.3e-101
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
           NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 203
           SVHGYVENTIEQIRNDILGLKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]
BLAST of CsaV3_3G014190 vs. TrEMBL
Match: tr|A0A1S4DSM0|A0A1S4DSM0_CUCME (transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.9e-80
Identity = 172/202 (85.15%), Postives = 175/202 (86.63%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60
           MEACSDSV+PLFPLILP+HHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120
           VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEME                     
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEME-XXXXXXXXXXXXXXXXXXXX 120

Query: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180
               VIVSISGNIVLFGVIIASVQRG+VTQILLVFERHK EVLAANVVVSHGNLTLTVTA
Sbjct: 121 XXXXVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILGLKK 203
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILSLKK 201

[Close]
BLAST of CsaV3_3G014190 vs. TrEMBL
Match: tr|A0A061EPZ0|A0A061EPZ0_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021144 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 91/206 (44.17%), Postives = 130/206 (63.11%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEA--TEKEASASRKRCRALEANGGVQ--KKEKEKRKEMS 60
           ME  +D +IP      P     A   E++ S+SR+R RA EA    +  KKE+++R++M+
Sbjct: 37  MEGYNDKLIPPLSQFSPSRQAAAAIVEEKGSSSRERGRAKEAKEVTESLKKERDRREKMA 96

Query: 61  ESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSES----VALLPNT 120
           E++D+L+S+VPNL PKATRE IV   I +I+ L+K++ R+E  K SSES    + L  N 
Sbjct: 97  ENYDLLQSMVPNLFPKATREMIVGETIAYIQSLEKEITRMEELKNSSESSKGKMHLYSNR 156

Query: 121 NSDSSGGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHG 180
           NS          + V++S N+V FG I + V+  +VT I +V  +HKAEVL ANV V+H 
Sbjct: 157 NS---------SIDVTVSSNVVFFG-IQSMVRPRLVTDIFMVLHKHKAEVLGANVAVNHR 216

Query: 181 NLTLTVTASVHGYVENTIEQIRNDIL 199
            LTLTVTA V+G  + TIE+I+ DIL
Sbjct: 217 QLTLTVTAVVNGNRDRTIEKIKGDIL 232

[Close]
BLAST of CsaV3_3G014190 vs. TrEMBL
Match: tr|A0A2N9GWC3|A0A2N9GWC3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31884 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.3e-28
Identity = 88/206 (42.72%), Postives = 137/206 (66.50%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFE-ATEKEASASRKRCRALEANGGVQ--KKEKEKRKEMSE 60
           ME  SDSVIP    I  +H  E A  ++ S+SRKR R  ++   ++  +KE+++R +MS+
Sbjct: 20  MEGYSDSVIPPLSQISTLHEPEIAFVEKGSSSRKRGRPPKSASRIENIQKERDRRGKMSD 79

Query: 61  SFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVA-----LLPNT 120
           S+  L+S+VPNL PKATRE IV+   ++I  L+++  RLE  K+SS+S+A     LLP+T
Sbjct: 80  SYAFLQSMVPNLFPKATREKIVNETTKYIRVLEEEKSRLEKLKESSKSMAAKGTILLPST 139

Query: 121 NSDSSGGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHG 180
           N      +N     V++S N+  FG+ +  V++G++T+I  VF +H+AEVLAANV V+HG
Sbjct: 140 N------LNSCVSCVTVSSNVAFFGIQML-VRQGLLTKIFEVFHKHQAEVLAANVAVNHG 199

Query: 181 NLTLTVTASVHGYVENTIEQIRNDIL 199
            + +T+TA V+G   NT+E+I+ +IL
Sbjct: 200 QVMVTITACVNGNGGNTVEKIKKEIL 218

[Close]
BLAST of CsaV3_3G014190 vs. TrEMBL
Match: tr|A0A2P5FX68|A0A2P5FX68_9ROSA (Myc-type, basic helix-loop-helix (BHLH) domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021580 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.1e-27
Identity = 87/204 (42.65%), Postives = 121/204 (59.31%), Query Frame = 0 

Query: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCR------ALEANGGVQKKEKEKRKE 60
           ME  SDSVIP      P+       ++ S+SRKR R      A E+     +KE+ +R +
Sbjct: 28  MEGYSDSVIPPLSHFKPLLESTIVAQQGSSSRKRARTKSSSWARESRAESLEKERGRRLK 87

Query: 61  MSESFDVLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNS 120
           M+ES  +L SLVP L PK TRE ++   I++I++L+++   LE  K+SS     L    +
Sbjct: 88  MNESLSILESLVPGLLPKTTREKVLHSTIEYIKYLEEKKKMLEKLKESSAPKGRLALPCT 147

Query: 121 DSSGGINGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNL 180
            SS  ++   V V  SGN+  FG I    ++G+VTQI +VF +H AEV AANVVV+H  L
Sbjct: 148 RSSRNLS---VSVKFSGNLAFFG-IQTPKRQGLVTQIFMVFHKHMAEVFAANVVVNHSQL 207

Query: 181 TLTVTASVHGYVENTIEQIRNDIL 199
           TLTVTA V G   NT+E+I+ DIL
Sbjct: 208 TLTVTAFVDGNGSNTVEEIKRDIL 227

The following BLAST results are available for this feature:
BLAST of CsaV3_3G014190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134190.11.1e-100100.00PREDICTED: transcription factor bHLH95-like [Cucumis sativus] >KGN57073.1 hypoth... [more]
XP_016898986.12.8e-8085.15PREDICTED: transcription factor bHLH95-like [Cucumis melo][more]
XP_022955986.13.2e-7680.20uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 unchar... [more]
XP_023528352.15.5e-7679.70uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo][more]
XP_022979931.16.1e-7578.82uncharacterized protein LOC111479473 [Cucurbita maxima][more]
BLAST of CsaV3_3G014190 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G46690.11.8e-0435.14beta HLH protein 71[more]
BLAST of CsaV3_3G014190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G014190 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5R7|A0A0A0L5R7_CUCSA7.3e-101100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 SV=1[more]
tr|A0A1S4DSM0|A0A1S4DSM0_CUCME1.9e-8085.15transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV... [more]
tr|A0A061EPZ0|A0A061EPZ0_THECC2.2e-2844.17Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021144 PE=4 SV=1[more]
tr|A0A2N9GWC3|A0A2N9GWC3_FAGSY6.3e-2842.72Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31884 PE=4 SV=1[more]
tr|A0A2P5FX68|A0A2P5FX68_9ROSA9.1e-2742.65Myc-type, basic helix-loop-helix (BHLH) domain containing protein OS=Trema orien... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G014190.1CsaV3_3G014190.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106
NoneNo IPR availableCOILSCoilCoilcoord: 21..41
NoneNo IPR availablePANTHERPTHR31945:SF25SUBFAMILY NOT NAMEDcoord: 17..199
NoneNo IPR availablePANTHERPTHR31945FAMILY NOT NAMEDcoord: 17..199
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 47..95
e-value: 1.0E-5
score: 35.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 46..90
e-value: 4.6E-6
score: 26.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 39..89
score: 10.137
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 55..93
e-value: 1.30713E-5
score: 39.8899
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3DG3DSA:4.10.280.10coord: 45..117
e-value: 3.3E-9
score: 38.7
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 47..102

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G014190CSPI03G13970Wild cucumber (PI 183967)cpicucB144
CsaV3_3G014190Cucsa.253520Cucumber (Gy14) v1cgycucB387
CsaV3_3G014190CmoCh14G016810Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G014190Cp4.1LG03g11240Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G014190CsGy3G014090Cucumber (Gy14) v2cgybcucB117
CsaV3_3G014190Carg20133Silver-seed gourdcarcucB0878
CsaV3_3G014190Cla021708Watermelon (97103) v1cucwmB239
CsaV3_3G014190MELO3C006612Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G014190ClCG05G005840Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G014190Lsi05G015070Bottle gourd (USVL1VR-Ls)cuclsiB218
CsaV3_3G014190MELO3C006612.2Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G014190Cla97C05G087280Watermelon (97103) v2cucwmbB206
CsaV3_3G014190Bhi01G000681Wax gourdcucwgoB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G014190Silver-seed gourdcarcucB0355
CsaV3_3G014190Silver-seed gourdcarcucB0640
CsaV3_3G014190Cucumber (Gy14) v2cgybcucB271
CsaV3_3G014190Cucumber (Gy14) v2cgybcucB279
CsaV3_3G014190Cucumber (Gy14) v1cgycucB274
CsaV3_3G014190Cucumber (Gy14) v1cgycucB554
CsaV3_3G014190Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G014190Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G014190Cucurbita maxima (Rimu)cmacucB0433
CsaV3_3G014190Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G014190Cucurbita maxima (Rimu)cmacucB1049
CsaV3_3G014190Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G014190Cucurbita moschata (Rifu)cmocucB0428
CsaV3_3G014190Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G014190Cucurbita moschata (Rifu)cmocucB1032
CsaV3_3G014190Cucurbita pepo (Zucchini)cpecucB0154
CsaV3_3G014190Cucurbita pepo (Zucchini)cpecucB0379
CsaV3_3G014190Cucurbita pepo (Zucchini)cpecucB0385
CsaV3_3G014190Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G014190Wild cucumber (PI 183967)cpicucB339
CsaV3_3G014190Wild cucumber (PI 183967)cpicucB345
CsaV3_3G014190Bottle gourd (USVL1VR-Ls)cuclsiB163
CsaV3_3G014190Melon (DHL92) v3.5.1cucmeB176
CsaV3_3G014190Melon (DHL92) v3.6.1cucmedB167
CsaV3_3G014190Watermelon (Charleston Gray)cucwcgB254
CsaV3_3G014190Watermelon (97103) v1cucwmB288
CsaV3_3G014190Watermelon (97103) v2cucwmbB233
CsaV3_3G014190Wax gourdcucwgoB262
CsaV3_3G014190Cucumber (Chinese Long) v3cuccucB141
CsaV3_3G014190Cucumber (Chinese Long) v3cuccucB150