MELO3C006565 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006565
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	E3 ubiquitin-protein ligase
Location	chr6 : 4220959 .. 4222200 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGCATAACCATTCTATTTTTTGCCAAGGAAGAGCCCAATTGTAGGTTTGTTCCAGTATATCCCGATGCCTTCAAGCCAGTAAAAATCCCATTTCAGAAGGGTCCTGCTCAGAAATTCTTTCAGCCCGTAGGAACTGGCTTTGACTTGGGATTTTTTGACTTGGATGACCTCTCAAAACCTTCACCTGCAGAAGACACGTTCCCTCTTGTTATATCAGCTGAGACTTGTTCACCATCTCAGTCTGATGATGAACGAATGGGTGAACCTCAACAAGATAATTCACACATGCAAATAACTCAAGCTGTTTTGGAGAAGAAAAATGGTGGTCCTTTCCAGGTTAAAGTGATTAGGCAACTACTGTGGATTGATGGAGTCAGATATGAGTTGCGTGAAATATTTGGAATAGGGAGTTCATCAGCAGAAGGTTTTGACGATAATGACACCGGGAAGGAGTGTGTCATTTGCATGACTGAACCCAAGGATACTGCCGTACTACCATGCCGACATTTGGTAAGACTCCATTTTGAGTGTTTGTTCATGGAAAGCATGTGATGAAATTCAAACTGCTATAGTCCGTCTTTTACATTTAATTTCTTCAAACGCATGATGGAACTTACATAGAAAAACAACACACTTTTCTGGCTATATCTTTTATCTTCTATATCTCTTCTCTGGCTTATTGGTCGTATACGCCCCTTGCTTTCCAGCTAGCCCAAATTTGAGTTGAGAGTCATTGAATTTATTAGTATTTTAAAAAGAAATTAATAAAAAAAAAATGGCACATAACAAGACAGTAGACACATTTCCCTTCCTTTTTTTTAATCACTTTTGTACTTAAATTTCCTTTCTTGTGTTCCTTTGTCCGCAGTGCATGTGCAGTGAATGTGCCAAGGAACTGAGGCTTCAATCCAATAAATGTCCTATTTGCCGTCAACCAATTGAAGAACTAATAGAAATCAGGATAAACAATAGCGACCAATGAGAATTTCCTCTTCATCCTTTGTTGGATCGCCTGGTATGGCTATTAAATTCTTTGGTTTTTGATGTGTCATAATCCCACATACTGCATTCTTTAGTATCTTTACACACACACATATTTGTATATTTCTTTTTCTTCGTATACATAACACTAGTGTAGTAGTTACAATTTGATATTTCCATCTCATGTCTAACTGTCAAATAATGTCATACCAATCGTCTCAGATCTGACTTTCTACTGTAATGTATGATTTGAAC

mRNA sequence

ATGAACAGCATAACCATTCTATTTTTTGCCAAGGAAGAGCCCAATTGTAGGTTTGTTCCAGTATATCCCGATGCCTTCAAGCCAGTAAAAATCCCATTTCAGAAGGGTCCTGCTCAGAAATTCTTTCAGCCCGTAGGAACTGGCTTTGACTTGGGATTTTTTGACTTGGATGACCTCTCAAAACCTTCACCTGCAGAAGACACGTTCCCTCTTGTTATATCAGCTGAGACTTGTTCACCATCTCAGTCTGATGATGAACGAATGGGTGAACCTCAACAAGATAATTCACACATGCAAATAACTCAAGCTGTTTTGGAGAAGAAAAATGGTGGTCCTTTCCAGGTTAAAGTGATTAGGCAACTACTGTGGATTGATGGAGTCAGATATGAGTTGCGTGAAATATTTGGAATAGGGAGTTCATCAGCAGAAGGTTTTGACGATAATGACACCGGGAAGGAGTGTGTCATTTGCATGACTGAACCCAAGGATACTGCCGTACTACCATGCCGACATTTGTGCATGTGCAGTGAATGTGCCAAGGAACTGAGGCTTCAATCCAATAAATGTCCTATTTGCCGTCAACCAATTGAAGAACTAATAGAAATCAGGATAAACAATAGCGACCAATGAGAATTTCCTCTTCATCCTTTGTTGGATCGCCTGGTATGGCTATTAAATTCTTTGGTTTTTGATGTGTCATAATCCCACATACTGCATTCTTTAGTATCTTTACACACACACATATTTGTATATTTCTTTTTCTTCGTATACATAACACTAGTGTAGTAGTTACAATTTGATATTTCCATCTCATGTCTAACTGTCAAATAATGTCATACCAATCGTCTCAGATCTGACTTTCTACTGTAATGTATGATTTGAAC

Coding sequence (CDS)

ATGAACAGCATAACCATTCTATTTTTTGCCAAGGAAGAGCCCAATTGTAGGTTTGTTCCAGTATATCCCGATGCCTTCAAGCCAGTAAAAATCCCATTTCAGAAGGGTCCTGCTCAGAAATTCTTTCAGCCCGTAGGAACTGGCTTTGACTTGGGATTTTTTGACTTGGATGACCTCTCAAAACCTTCACCTGCAGAAGACACGTTCCCTCTTGTTATATCAGCTGAGACTTGTTCACCATCTCAGTCTGATGATGAACGAATGGGTGAACCTCAACAAGATAATTCACACATGCAAATAACTCAAGCTGTTTTGGAGAAGAAAAATGGTGGTCCTTTCCAGGTTAAAGTGATTAGGCAACTACTGTGGATTGATGGAGTCAGATATGAGTTGCGTGAAATATTTGGAATAGGGAGTTCATCAGCAGAAGGTTTTGACGATAATGACACCGGGAAGGAGTGTGTCATTTGCATGACTGAACCCAAGGATACTGCCGTACTACCATGCCGACATTTGTGCATGTGCAGTGAATGTGCCAAGGAACTGAGGCTTCAATCCAATAAATGTCCTATTTGCCGTCAACCAATTGAAGAACTAATAGAAATCAGGATAAACAATAGCGACCAATGA

Protein sequence

MNSITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKPSPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLLWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKELRLQSNKCPICRQPIEELIEIRINNSDQ*

Homology

[Close]

BLAST of MELO3C006565 vs. Swiss-Prot
Match: LUL4_ARATH (Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.7e-73
Identity = 134/208 (64.42%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           S TI FFAKEEPNC  +P +P+ + P +  FQKGP QKF QP GTG DL FF LDDLSKP
Sbjct: 157 SFTITFFAKEEPNCTIIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKP 216

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
              ED +PLVISAET     S  E      Q + H Q+TQAVLEK N G F+VKV++Q+L
Sbjct: 217 LE-EDVYPLVISAETIISPNSISE------QSSVHKQVTQAVLEKDNDGSFKVKVVKQIL 276

Query: 123 WIDGVRYELREIFGIGSS-SAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           WI+GVRYELRE++G  +  +A G D++ +G ECVICMTE KDTAVLPCRHLCMCS+CAKE
Sbjct: 277 WIEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKE 336

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LRLQSNKCPICRQPIEEL+EI++N+SD+
Sbjct: 337 LRLQSNKCPICRQPIEELLEIKMNSSDE 357

[Close]

BLAST of MELO3C006565 vs. Swiss-Prot
Match: LUL3_ARATH (Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana GN=LUL3 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.0e-69
Identity = 130/213 (61.03%), Postives = 160/213 (75.12%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           S TI+FF +EE  C  VP  P+AF P+K+PFQKG  QKF Q  GTG DLGFF LDDLSKP
Sbjct: 173 SFTIIFFGEEESKCTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKP 232

Query: 63  SPAEDTFPLVISAETC-SPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQL 122
           SP E+ +PLVISAET  SPS   +E +        H QITQAVLEK N G F+VKV++Q+
Sbjct: 233 SP-EEVYPLVISAETVISPSSVSEEPL-------VHKQITQAVLEKTNDGSFKVKVMKQI 292

Query: 123 LWIDGVRYELREIFGIGSS-----SAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCS 182
           LWI+G RYEL+E++GI +S     +A G +D   GKECVIC+TEPKDTAV+PCRHLC+CS
Sbjct: 293 LWIEGERYELQELYGIDNSITQGTAASGLEDTG-GKECVICLTEPKDTAVMPCRHLCLCS 352

Query: 183 ECAKELRLQSNKCPICRQPIEELIEIRINNSDQ 210
           +CA+ELR Q+NKCPICRQPI EL++I++ +SD+
Sbjct: 353 DCAEELRFQTNKCPICRQPIHELVKIKVESSDE 376

[Close]

BLAST of MELO3C006565 vs. Swiss-Prot
Match: LOFG2_ARATH (Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana GN=LOG2 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-51
Identity = 98/210 (46.67%), Postives = 142/210 (67.62%), Query Frame = 1


Query: 4   ITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKPS 63
           I+++FFAKE  +C+      D   P+ + F+KG  QKF Q  G+G D   F+  +L K +
Sbjct: 169 ISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAA 228

Query: 64  PAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLLW 123
              + +PL + AE  +PS  ++E   E +  + + QITQAV EK  G   +++V++Q+LW
Sbjct: 229 ADTEIYPLAVKAEA-APSGGENEE--EERSGSKNAQITQAVYEKDKG-EIKIRVVKQILW 288

Query: 124 IDGVRYELREIFGIGSSSAEGFDD-----NDTGKECVICMTEPKDTAVLPCRHLCMCSEC 183
           ++G RYEL+EI+GIG++  EG DD     ND GKECVIC++EP+DT VLPCRH+CMCS C
Sbjct: 289 VNGTRYELQEIYGIGNT-VEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGC 348

Query: 184 AKELRLQSNKCPICRQPIEELIEIRINNSD 209
           AK LR Q+N+CPICRQP+E L+EI+++ ++
Sbjct: 349 AKVLRFQTNRCPICRQPVERLLEIKVHGNN 373

[Close]

BLAST of MELO3C006565 vs. Swiss-Prot
Match: LUL2_ARATH (Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana GN=LUL2 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-48
Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SIT++FFAKE  +C  +    D F   ++ F KG  Q+F Q  GTG D       DL + 
Sbjct: 99  SITVMFFAKEGKDCNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEA 158

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           +   D + + + AE  S    DD     P+    + QIT  VLEK + G ++ +V++Q+L
Sbjct: 159 NET-DVYHVAVKAEVVS---EDDH----PESGTPNRQITHVVLEKDHKGEYKARVVKQIL 218

Query: 123 WIDGVRYELREIFGIGSSSAE-GFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           W++G RY L+EI+GIG++  + G D N+ GKECVIC++EP+DT VLPCRH+CMCS CAK 
Sbjct: 219 WVNGNRYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKL 278

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LR Q+N CPICRQP++ L+EI +NN+D+
Sbjct: 279 LRFQTNLCPICRQPVDRLLEITVNNNDR 298

[Close]

BLAST of MELO3C006565 vs. Swiss-Prot
Match: LUL1_ARATH (Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana GN=LUL1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.6e-43
Identity = 90/202 (44.55%), Postives = 125/202 (61.88%), Query Frame = 1


Query: 4   ITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKPS 63
           IT++FFA E+  C       D   P+   F +G  QKF Q  GTG DL  F   +L K  
Sbjct: 149 ITVVFFATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFKEV 208

Query: 64  PAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLLW 123
              D FPL + AE  +P++       E +  ++++QITQ V  K+ G   +++V++Q+LW
Sbjct: 209 DT-DVFPLAVKAEA-TPAE-------EGKSGSTNVQITQVVYTKEKG-EIKIEVVKQILW 268

Query: 124 IDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKELR 183
           ++  RYEL EI+GI ++     D +D GKECV+C++EP+DT VLPCRH+CMCS CAK LR
Sbjct: 269 VNKRRYELLEIYGIENT----VDGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALR 328

Query: 184 LQSNKCPICRQPIEELIEIRIN 206
            Q+N CP+CRQP+E L+EI  N
Sbjct: 329 FQTNLCPVCRQPVEMLLEINKN 336

[Close]

BLAST of MELO3C006565 vs. TrEMBL
Match: A0A0A0LAF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150050 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 2.6e-116
Identity = 203/207 (98.07%), Postives = 206/207 (99.52%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP
Sbjct: 192 SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 251

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           SPAEDTFPLVISAETCSPSQSDDER+GEP +DNSHMQITQAVLEKKNGGPFQV+VIRQLL
Sbjct: 252 SPAEDTFPLVISAETCSPSQSDDERIGEPHRDNSHMQITQAVLEKKNGGPFQVRVIRQLL 311

Query: 123 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 182
           WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL
Sbjct: 312 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 371

Query: 183 RLQSNKCPICRQPIEELIEIRINNSDQ 210
           RLQSNKCPICRQPIEELIEIRINNSDQ
Sbjct: 372 RLQSNKCPICRQPIEELIEIRINNSDQ 398

[Close]

BLAST of MELO3C006565 vs. TrEMBL
Match: W9RTZ2_9ROSA (RING finger protein 157 OS=Morus notabilis GN=L484_010024 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 7.7e-92
Identity = 160/207 (77.29%), Postives = 181/207 (87.44%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITIL+FAKEEPNC+F+P+YP+AF PV+IPFQKG  Q+F QP GTG DLGFF+LDDLSKP
Sbjct: 193 SITILYFAKEEPNCKFIPLYPEAFMPVRIPFQKGSGQRFRQPSGTGIDLGFFELDDLSKP 252

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           SP ED FPLVISAETC PS S  E +   Q  +++MQITQAVLEKKN   FQVKVIRQ+L
Sbjct: 253 SPEEDVFPLVISAETCPPSNSTGEHLSSSQDISNNMQITQAVLEKKNTESFQVKVIRQIL 312

Query: 123 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 182
           W+DGVRYELR+I+GIGSSS EGF DND+GKECVICMTEPKDT VLPCRH+CMCSECAKEL
Sbjct: 313 WVDGVRYELRDIYGIGSSSVEGFKDNDSGKECVICMTEPKDTFVLPCRHMCMCSECAKEL 372

Query: 183 RLQSNKCPICRQPIEELIEIRINNSDQ 210
           RLQSNKCPICRQPIEEL+ I+INN D+
Sbjct: 373 RLQSNKCPICRQPIEELVGIKINNGDE 399

[Close]

BLAST of MELO3C006565 vs. TrEMBL
Match: F6HDL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02680 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.4e-88
Identity = 158/205 (77.07%), Postives = 178/205 (86.83%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITI +FAKEE NCRF P++P+A+ PV+IPFQKGP QKF QP GTG DLGFF+LDDLSKP
Sbjct: 186 SITIYYFAKEESNCRFSPLFPEAYMPVRIPFQKGPGQKFRQPSGTGIDLGFFELDDLSKP 245

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNS-HMQITQAVLEKKNGGPFQVKVIRQL 122
           SP ED FPLVISAET  P    DE  G+P    S HMQITQAVLEK NG PFQV+VIRQ+
Sbjct: 246 SPGEDVFPLVISAETSLPLHPTDEHSGDPTPRTSPHMQITQAVLEKHNGDPFQVRVIRQI 305

Query: 123 LWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           LW++ VRYELREI+GI SS++EGF+DND+GKECVICMTEPKDTAVLPCRH+CMCSECAKE
Sbjct: 306 LWVNEVRYELREIYGIASSASEGFNDNDSGKECVICMTEPKDTAVLPCRHMCMCSECAKE 365

Query: 183 LRLQSNKCPICRQPIEELIEIRINN 207
           LRLQSNKCPICRQPIEELIEI+I+N
Sbjct: 366 LRLQSNKCPICRQPIEELIEIKIDN 390

[Close]

BLAST of MELO3C006565 vs. TrEMBL
Match: A0A0B0NEW4_GOSAR (RING finger protein OS=Gossypium arboreum GN=F383_06764 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.0e-88
Identity = 160/206 (77.67%), Postives = 180/206 (87.38%), Query Frame = 1


Query: 4   ITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKPS 63
           ITI +FAKEE NCRFVPV+P+AF+PV++PFQKG  Q+F QP GTG DLGFF+LDDLSKPS
Sbjct: 37  ITIFYFAKEELNCRFVPVFPEAFEPVRVPFQKGLGQRFQQPPGTGIDLGFFELDDLSKPS 96

Query: 64  PAEDTFPLVISAETCSPSQSDDERMGEPQQDNS-HMQITQAVLEKKNGGPFQVKVIRQLL 123
           P ED FPLVISAETC    S DE +G+P Q  S HMQITQA+LE KNG  FQ KVIRQ+L
Sbjct: 97  PGEDVFPLVISAETCMLPHSSDEHVGDPTQSTSAHMQITQAILE-KNGNSFQAKVIRQIL 156

Query: 124 WIDGVRYELREIFGIGSS-SAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 183
           W+DGVRYELREI+GIGSS +AEGFDD+D GKECVICMTEPKDTAVLPCRH+CMCSECAK 
Sbjct: 157 WVDGVRYELREIYGIGSSAAAEGFDDSDPGKECVICMTEPKDTAVLPCRHMCMCSECAKT 216

Query: 184 LRLQSNKCPICRQPIEELIEIRINNS 208
           LRLQSNKCPICRQPIEELIEI+IN++
Sbjct: 217 LRLQSNKCPICRQPIEELIEIKINST 241

[Close]

BLAST of MELO3C006565 vs. TrEMBL
Match: A0A067L6I0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02103 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.7e-88
Identity = 156/208 (75.00%), Postives = 178/208 (85.58%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITI +FAKEE NCRFVP++P+A  PV++PFQKG  QKF QP GTG DLGFF+LDDLSKP
Sbjct: 176 SITIFYFAKEEANCRFVPIFPEAHLPVRVPFQKGLGQKFCQPSGTGIDLGFFELDDLSKP 235

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNS-HMQITQAVLEKKNGGPFQVKVIRQL 122
           SP ED FPLVI AETC P  S DE + +     S  MQITQA+LEKKN  PFQV+V+RQ+
Sbjct: 236 SPGEDVFPLVIVAETCLPVDSSDENLDDSVPIASGRMQITQAILEKKNSDPFQVRVVRQI 295

Query: 123 LWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           LWIDGVRYELRE++GIGSS+AE F+D+D GKECVICMTEPKDTAVLPCRH+CMCSECAKE
Sbjct: 296 LWIDGVRYELRELYGIGSSAAEDFNDSDPGKECVICMTEPKDTAVLPCRHMCMCSECAKE 355

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LRLQSNKCPICRQP+EELI+I+INN DQ
Sbjct: 356 LRLQSNKCPICRQPMEELIKIKINNGDQ 383

[Close]

BLAST of MELO3C006565 vs. TAIR10
Match: AT3G06140.1 (AT3G06140.1 RING/U-box superfamily protein)

HSP 1 Score: 275.0 bits (702), Expect = 3.8e-74
Identity = 134/208 (64.42%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           S TI FFAKEEPNC  +P +P+ + P +  FQKGP QKF QP GTG DL FF LDDLSKP
Sbjct: 157 SFTITFFAKEEPNCTIIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKP 216

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
              ED +PLVISAET     S  E      Q + H Q+TQAVLEK N G F+VKV++Q+L
Sbjct: 217 LE-EDVYPLVISAETIISPNSISE------QSSVHKQVTQAVLEKDNDGSFKVKVVKQIL 276

Query: 123 WIDGVRYELREIFGIGSS-SAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           WI+GVRYELRE++G  +  +A G D++ +G ECVICMTE KDTAVLPCRHLCMCS+CAKE
Sbjct: 277 WIEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKE 336

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LRLQSNKCPICRQPIEEL+EI++N+SD+
Sbjct: 337 LRLQSNKCPICRQPIEELLEIKMNSSDE 357

[Close]

BLAST of MELO3C006565 vs. TAIR10
Match: AT5G19080.1 (AT5G19080.1 RING/U-box superfamily protein)

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-70
Identity = 130/213 (61.03%), Postives = 160/213 (75.12%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           S TI+FF +EE  C  VP  P+AF P+K+PFQKG  QKF Q  GTG DLGFF LDDLSKP
Sbjct: 173 SFTIIFFGEEESKCTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKP 232

Query: 63  SPAEDTFPLVISAETC-SPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQL 122
           SP E+ +PLVISAET  SPS   +E +        H QITQAVLEK N G F+VKV++Q+
Sbjct: 233 SP-EEVYPLVISAETVISPSSVSEEPL-------VHKQITQAVLEKTNDGSFKVKVMKQI 292

Query: 123 LWIDGVRYELREIFGIGSS-----SAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCS 182
           LWI+G RYEL+E++GI +S     +A G +D   GKECVIC+TEPKDTAV+PCRHLC+CS
Sbjct: 293 LWIEGERYELQELYGIDNSITQGTAASGLEDTG-GKECVICLTEPKDTAVMPCRHLCLCS 352

Query: 183 ECAKELRLQSNKCPICRQPIEELIEIRINNSDQ 210
           +CA+ELR Q+NKCPICRQPI EL++I++ +SD+
Sbjct: 353 DCAEELRFQTNKCPICRQPIHELVKIKVESSDE 376

[Close]

BLAST of MELO3C006565 vs. TAIR10
Match: AT3G09770.1 (AT3G09770.1 RING/U-box superfamily protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-52
Identity = 98/210 (46.67%), Postives = 142/210 (67.62%), Query Frame = 1


Query: 4   ITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKPS 63
           I+++FFAKE  +C+      D   P+ + F+KG  QKF Q  G+G D   F+  +L K +
Sbjct: 169 ISVIFFAKESEDCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAA 228

Query: 64  PAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLLW 123
              + +PL + AE  +PS  ++E   E +  + + QITQAV EK  G   +++V++Q+LW
Sbjct: 229 ADTEIYPLAVKAEA-APSGGENEE--EERSGSKNAQITQAVYEKDKG-EIKIRVVKQILW 288

Query: 124 IDGVRYELREIFGIGSSSAEGFDD-----NDTGKECVICMTEPKDTAVLPCRHLCMCSEC 183
           ++G RYEL+EI+GIG++  EG DD     ND GKECVIC++EP+DT VLPCRH+CMCS C
Sbjct: 289 VNGTRYELQEIYGIGNT-VEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGC 348

Query: 184 AKELRLQSNKCPICRQPIEELIEIRINNSD 209
           AK LR Q+N+CPICRQP+E L+EI+++ ++
Sbjct: 349 AKVLRFQTNRCPICRQPVERLLEIKVHGNN 373

[Close]

BLAST of MELO3C006565 vs. TAIR10
Match: AT3G53410.1 (AT3G53410.1 RING/U-box superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-49
Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SIT++FFAKE  +C  +    D F   ++ F KG  Q+F Q  GTG D       DL + 
Sbjct: 99  SITVMFFAKEGKDCNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADLVEA 158

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           +   D + + + AE  S    DD     P+    + QIT  VLEK + G ++ +V++Q+L
Sbjct: 159 NET-DVYHVAVKAEVVS---EDDH----PESGTPNRQITHVVLEKDHKGEYKARVVKQIL 218

Query: 123 WIDGVRYELREIFGIGSSSAE-GFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           W++G RY L+EI+GIG++  + G D N+ GKECVIC++EP+DT VLPCRH+CMCS CAK 
Sbjct: 219 WVNGNRYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKL 278

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LR Q+N CPICRQP++ L+EI +NN+D+
Sbjct: 279 LRFQTNLCPICRQPVDRLLEITVNNNDR 298

[Close]

BLAST of MELO3C006565 vs. TAIR10
Match: AT5G03200.1 (AT5G03200.1 RING/U-box superfamily protein)

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-44
Identity = 90/202 (44.55%), Postives = 125/202 (61.88%), Query Frame = 1


Query: 4   ITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKPS 63
           IT++FFA E+  C       D   P+   F +G  QKF Q  GTG DL  F   +L K  
Sbjct: 149 ITVVFFATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGIDLTAFKDSELFKEV 208

Query: 64  PAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLLW 123
              D FPL + AE  +P++       E +  ++++QITQ V  K+ G   +++V++Q+LW
Sbjct: 209 DT-DVFPLAVKAEA-TPAE-------EGKSGSTNVQITQVVYTKEKG-EIKIEVVKQILW 268

Query: 124 IDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKELR 183
           ++  RYEL EI+GI ++     D +D GKECV+C++EP+DT VLPCRH+CMCS CAK LR
Sbjct: 269 VNKRRYELLEIYGIENT----VDGSDEGKECVVCLSEPRDTTVLPCRHMCMCSGCAKALR 328

Query: 184 LQSNKCPICRQPIEELIEIRIN 206
            Q+N CP+CRQP+E L+EI  N
Sbjct: 329 FQTNLCPVCRQPVEMLLEINKN 336

[Close]

BLAST of MELO3C006565 vs. NCBI nr
Match: gi|659076514|ref|XP_008438722.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 5.3e-118
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP
Sbjct: 194 SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 253

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL
Sbjct: 254 SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 313

Query: 123 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 182
           WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL
Sbjct: 314 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 373

Query: 183 RLQSNKCPICRQPIEELIEIRINNSDQ 210
           RLQSNKCPICRQPIEELIEIRINNSDQ
Sbjct: 374 RLQSNKCPICRQPIEELIEIRINNSDQ 400

[Close]

BLAST of MELO3C006565 vs. NCBI nr
Match: gi|778678585|ref|XP_011650992.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 3.8e-116
Identity = 203/207 (98.07%), Postives = 206/207 (99.52%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP
Sbjct: 192 SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 251

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           SPAEDTFPLVISAETCSPSQSDDER+GEP +DNSHMQITQAVLEKKNGGPFQV+VIRQLL
Sbjct: 252 SPAEDTFPLVISAETCSPSQSDDERIGEPHRDNSHMQITQAVLEKKNGGPFQVRVIRQLL 311

Query: 123 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 182
           WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL
Sbjct: 312 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 371

Query: 183 RLQSNKCPICRQPIEELIEIRINNSDQ 210
           RLQSNKCPICRQPIEELIEIRINNSDQ
Sbjct: 372 RLQSNKCPICRQPIEELIEIRINNSDQ 398

[Close]

BLAST of MELO3C006565 vs. NCBI nr
Match: gi|703125903|ref|XP_010103424.1| (RING finger protein 157 [Morus notabilis])

HSP 1 Score: 344.7 bits (883), Expect = 1.1e-91
Identity = 160/207 (77.29%), Postives = 181/207 (87.44%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SITIL+FAKEEPNC+F+P+YP+AF PV+IPFQKG  Q+F QP GTG DLGFF+LDDLSKP
Sbjct: 193 SITILYFAKEEPNCKFIPLYPEAFMPVRIPFQKGSGQRFRQPSGTGIDLGFFELDDLSKP 252

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNSHMQITQAVLEKKNGGPFQVKVIRQLL 122
           SP ED FPLVISAETC PS S  E +   Q  +++MQITQAVLEKKN   FQVKVIRQ+L
Sbjct: 253 SPEEDVFPLVISAETCPPSNSTGEHLSSSQDISNNMQITQAVLEKKNTESFQVKVIRQIL 312

Query: 123 WIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKEL 182
           W+DGVRYELR+I+GIGSSS EGF DND+GKECVICMTEPKDT VLPCRH+CMCSECAKEL
Sbjct: 313 WVDGVRYELRDIYGIGSSSVEGFKDNDSGKECVICMTEPKDTFVLPCRHMCMCSECAKEL 372

Query: 183 RLQSNKCPICRQPIEELIEIRINNSDQ 210
           RLQSNKCPICRQPIEEL+ I+INN D+
Sbjct: 373 RLQSNKCPICRQPIEELVGIKINNGDE 399

[Close]

BLAST of MELO3C006565 vs. NCBI nr
Match: gi|657996899|ref|XP_008390824.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Malus domestica])

HSP 1 Score: 338.2 bits (866), Expect = 1.0e-89
Identity = 160/208 (76.92%), Postives = 179/208 (86.06%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           SIT+ +FAKEEP+CRFVP++P+AF PV++PFQKG  QKF QP GTG  LGFF+LDDLSKP
Sbjct: 213 SITVFYFAKEEPDCRFVPLFPEAFMPVRVPFQKGLGQKFRQPSGTGIALGFFELDDLSKP 272

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNS-HMQITQAVLEKKNGGPFQVKVIRQL 122
           SP ED FPLVISAETC P  S DE +GEP  D S  MQITQAVLEK NG  FQVKVIRQ+
Sbjct: 273 SPGEDVFPLVISAETCLPPDSTDEHVGEPAPDASPRMQITQAVLEKNNGDHFQVKVIRQI 332

Query: 123 LWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           LWID VRYELREI+GIG+S+ E FDD + GKECVICMTEPKDTAVLPCRH+CMCS+CAKE
Sbjct: 333 LWIDEVRYELREIYGIGTSTVESFDDTEPGKECVICMTEPKDTAVLPCRHMCMCSDCAKE 392

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LR+QSNKCPICRQPIEELIEI+IN SDQ
Sbjct: 393 LRIQSNKCPICRQPIEELIEIKINKSDQ 420

[Close]

BLAST of MELO3C006565 vs. NCBI nr
Match: gi|694429274|ref|XP_009342166.1| (PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Pyrus x bretschneideri])

HSP 1 Score: 337.0 bits (863), Expect = 2.3e-89
Identity = 158/208 (75.96%), Postives = 179/208 (86.06%), Query Frame = 1


Query: 3   SITILFFAKEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLDDLSKP 62
           S+T+ +FAKEEP CRFVP++P+AF PV++PFQKG  QKF QP GTG DLGFF+LDDLSKP
Sbjct: 227 SVTVFYFAKEEPECRFVPLFPEAFIPVRVPFQKGLGQKFRQPSGTGIDLGFFELDDLSKP 286

Query: 63  SPAEDTFPLVISAETCSPSQSDDERMGEPQQDNS-HMQITQAVLEKKNGGPFQVKVIRQL 122
           SP ED FPLVISAETC P  S DE +GEP  D S  MQITQAVLEK NG  FQVKVIRQ+
Sbjct: 287 SPGEDVFPLVISAETCLPPDSTDEHVGEPAPDASPRMQITQAVLEKNNGDHFQVKVIRQI 346

Query: 123 LWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVICMTEPKDTAVLPCRHLCMCSECAKE 182
           LWID VRYELREI+GIG+S+ E FDD + GKECVICMTEPKDTAVLPCRH+CMC++CAKE
Sbjct: 347 LWIDEVRYELREIYGIGTSTVESFDDTEPGKECVICMTEPKDTAVLPCRHMCMCTDCAKE 406

Query: 183 LRLQSNKCPICRQPIEELIEIRINNSDQ 210
           LR+QSNKCPICRQPIEELIEI+IN S+Q
Sbjct: 407 LRIQSNKCPICRQPIEELIEIKINKSEQ 434

The following BLAST results are available for this feature:

BLAST of MELO3C006565 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LUL4_ARATH	6.7e-73	64.42	Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana GN=LUL4 PE=2 S...	[more]
LUL3_ARATH	2.0e-69	61.03	Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana GN=LUL3 PE=1 S...	[more]
LOFG2_ARATH	1.9e-51	46.67	Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana GN=LOG2 PE=1 S...	[more]
LUL2_ARATH	2.0e-48	45.67	Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana GN=LUL2 PE=2 S...	[more]
LUL1_ARATH	5.6e-43	44.55	Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana GN=LUL1 PE=1 S...	[more]

BLAST of MELO3C006565 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAF7_CUCSA	2.6e-116	98.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150050 PE=4 SV=1	[more]
W9RTZ2_9ROSA	7.7e-92	77.29	RING finger protein 157 OS=Morus notabilis GN=L484_010024 PE=4 SV=1	[more]
F6HDL6_VITVI	1.4e-88	77.07	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02680 PE=4 SV=...	[more]
A0A0B0NEW4_GOSAR	4.0e-88	77.67	RING finger protein OS=Gossypium arboreum GN=F383_06764 PE=4 SV=1	[more]
A0A067L6I0_JATCU	6.7e-88	75.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02103 PE=4 SV=1	[more]

BLAST of MELO3C006565 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06140.1	3.8e-74	64.42	RING/U-box superfamily protein	[more]
AT5G19080.1	1.1e-70	61.03	RING/U-box superfamily protein	[more]
AT3G09770.1	1.1e-52	46.67	RING/U-box superfamily protein	[more]
AT3G53410.1	1.1e-49	45.67	RING/U-box superfamily protein	[more]
AT5G03200.1	3.1e-44	44.55	RING/U-box superfamily protein	[more]

BLAST of MELO3C006565 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076514\|ref\|XP_008438722.1\|	5.3e-118	100.00	PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis melo]	[more]
gi\|778678585\|ref\|XP_011650992.1\|	3.8e-116	98.07	PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Cucumis sativus]	[more]
gi\|703125903\|ref\|XP_010103424.1\|	1.1e-91	77.29	RING finger protein 157 [Morus notabilis]	[more]
gi\|657996899\|ref\|XP_008390824.1\|	1.0e-89	76.92	PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Malus domestica]	[more]
gi\|694429274\|ref\|XP_009342166.1\|	2.3e-89	75.96	PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006565T1	MELO3C006565T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 154..192 score: 2.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 154..193 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 146..198 score: 2.7
None	No IPR available	PANTHER	PTHR22996	MAHOGUNIN	coord: 3..209 score: 8.6E
None	No IPR available	PANTHER	PTHR22996:SF4	E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED	coord: 3..209 score: 8.6E
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 152..198 score: 9.7
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 153..200 score: 3.03

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006565	Csa3G150050	Cucumber (Chinese Long) v2	cumeB236
MELO3C006565	Cla021663	Watermelon (97103) v1	mewmB461
MELO3C006565	ClCG05G005430	Watermelon (Charleston Gray)	mewcgB427
MELO3C006565	Cla97C05G086770	Watermelon (97103) v2	mewmbB434
MELO3C006565	Bhi01G000632	Wax gourd	mewgoB529
MELO3C006565	CSPI03G13500	Wild cucumber (PI 183967)	cpimeB230
MELO3C006565	Cucsa.253990	Cucumber (Gy14) v1	cgymeB439
MELO3C006565	CmaCh14G016760	Cucurbita maxima (Rimu)	cmameB242
MELO3C006565	CmaCh06G014340	Cucurbita maxima (Rimu)	cmameB763
MELO3C006565	CmoCh06G014370	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006565	CmoCh14G017210	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006565	Lsi05G014560	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006565	Cp4.1LG03g11050	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006565	Cp4.1LG08g04470	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006565	CsGy3G013620	Cucumber (Gy14) v2	cgybmeB200
MELO3C006565	Carg17399	Silver-seed gourd	carmeB0610
MELO3C006565	Carg23823	Silver-seed gourd	carmeB0228
MELO3C006565	CsaV3_3G013720	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006565	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006565	Cucurbita pepo (Zucchini)	cpemeB316
MELO3C006565	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006565	Bottle gourd (USVL1VR-Ls)	lsimeB222
MELO3C006565	Silver-seed gourd	carmeB0073
MELO3C006565	Silver-seed gourd	carmeB0332
MELO3C006565	Watermelon (97103) v2	mewmbB448
MELO3C006565	Watermelon (97103) v2	mewmbB453
MELO3C006565	Wax gourd	mewgoB520
MELO3C006565	Melon (DHL92) v3.5.1	memeB051
MELO3C006565	Melon (DHL92) v3.5.1	memeB091
MELO3C006565	Cucurbita maxima (Rimu)	cmameB342
MELO3C006565	Cucurbita maxima (Rimu)	cmameB850
MELO3C006565	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006565	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006565	Watermelon (Charleston Gray)	mewcgB411
MELO3C006565	Watermelon (Charleston Gray)	mewcgB442
MELO3C006565	Watermelon (97103) v1	mewmB486
MELO3C006565	Watermelon (97103) v1	mewmB445