MELO3C006551 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C006551
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent RNA helicase
Location	chr6 : 4114033 .. 4118169 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAACCTTTCTTCCCACTACCAAATTCCCTCCTCCTTGGCTGCTCCTCTCATCTGAAAGGCCTTTTCCTGTTCATTTATCCTTTCAACTACCAAATTTTATCAATACCAATGGACCCATCTACTCCACCTCAAAATTTAGGCCTCTGCAAGCCCTTATGAGCTCTTCTTCTCTAAAGAACGTAGCTGAGTCCAATTTCGAGGGTTCCACTCTCCGGGAAATCTGCAATGGACGTGTTCCCGAGCATATACTGCGCAGGCAACTCTACATATTCCATTTATTCTTTTGAGTTCCTTCTTAATTTATCATTTTGTCTTATGGGGTGTTTTATTTTCCTTCCATTTTCTTTCTTAAATGATGTAGAACTGAGGAAATTGGATTTGTTGCCCCAACTGATGTGCAGAGGCAAGCTCTCCCGGTTTTGTTTTCGGGTCGGGATTGTGTGCTTCATGCGCAGGTCAAGTCTATGTATATAATAAAGCAATCTACTCGGAGAATGGACTGTTTTGGTTGTTTGTTTGTGTAATATTTTGAAATTCTATATACTGTTCGTTACTTACTCTTATCCTTTTAGACAGGTTCTGGAAAGACACTGACATATTTGCTATTGATATTTTCTGTCATCAACGCTCATAAATCAGCTGTTCAAGCATTGATTGTAGTACCCACACGGGAGTTAGGAATGCAAGTAAGATTGAACCCTGTATCTTCGAAATTATGCTTGAATTTTATGTATTTTCTTCTTTCATCAGTTCTTATTTTTCATTTTGTAGTTCTGAAATTAGTTTTGATGGTAATGTTGTTTTTGACCTGGTGGAATGGAACTCAGGTTACAAAAGTTGCTAGGATGTTAGCCGCCAAGCCTGCTGCATCTGAAGATGGGCTAAATTCTTATGTTGTCATGGCTCTTTTAGATGGAGGCTTGTTGAGAAGACACAAGACTTGGTTAAAGGTGCTGCATCTGTTTCTCTTCTTTAAGTACACTCAATGGCTTTTATGTGATGTTGTCAAGAAACTGGAGAAGGGTTTTGGGTTAGATGGTGTCCGATACTTCTAATTGCATGTTTAGAATCTATGTTTTGATGGCTTATAGTTGCATTGTCATGAACTGGACTAGTGGTCAATAAGGCCACTGTAAATTGTTAAATGCTTAGAGGGACGGCTACAAGCTATGGTGGCTACCTACCAAGGGGTAATATCCTTCAAGTTTCTTTTTGGCAACCAAACATAGTAGGGTTAGAAAGTTGTCTTGTTACAGTAGTTGAGGTGTATGCAATCGGACCCAAACACTAGCATGTATAGACAAAACAATGCATTGCCATAGCCAACTTCATTTTGAATTTTAAAGTTTCACCAATGACATCTGATTGTTGTTTCTTTCCTCTTCTCGCTACATTCTTGGGTTGTGATTAGTAGAAGAAACTCCCCATCCAGATTATAACTTTGAGTTATGAAAATTTGTAGGCAGATCCCCCTGAAATACTGGTGGCGACTGTAGGGAGCTTGTGCCAAATGGTAGAGAGACAGTTTCTTGACCTTGGTTCATTGAATGTGCTGGTAATTGATGAGGTACTTGAAAAGAAATTTTATTTTTCACTAGCTTCTTGGCACATGCTTTCTGGACTGCTCGTGAAAGTTGTTATGCCATTGAGTAATATTCTTATAGGTTTGCAGCCACCAAACCAGCTTGTTAAACATTGATTTATCATTCCACATGCTTGGATTATAATTCAGATGTCTTGAAAGTAAATAAAGATATAAATAAACATCATAAAATTGCTGAAGTAAGCTTGTTATATACTTTTATTTCAAGGTCTTCACATCATTTTTCTTGTTTGTTCGCCAGGTTGATTTCATGTTTAGTTCCTCAAAGCAAGTTAGTTCCCTTAAAAAACTATTGACGTCATATTCTTCATTCAGTAACCGTCAGACTATTTTTGCAAGTGCGTCAATTCCACAGCATAGGCATTTTCTTCAAGATTGTATACAGCAGAAGTGGACCAAGGTATATGGAGTTCTTTTTGGTCATTTCCAATTTGTGGTGCAATTCAGCTATTAATTTCCTTAGCTTGATGAAACTTTCCCTCCCTTTCTCTTGCAGAATACTGTTATTCATATTCATATTAACTCAACTCAGCCCATGCCATCATGTTTACTTCACAGATTTGTGGTATGAAATTTTATTGTCCATTCAGGACTATTCTCAGCCATCTCACTGCACATTGAATTTCTTTTTTCCAATAATTTTGATTTAACTTGCTGAAATATTATCTTTTGCTTGAGTTTGACAGACATGCGAGAAGAACAAAAAGCATCAAACCCTCCTGACCTTGTTACTAACAGATATTCCTCAGTCTGCGATCATTTTTGTCAGTGAGCAGGTTTGTGTTGATTGCCTTAAATGAAGAACGACCAAGTAAATAAGTAAAATATTCTAACAGCTTTCGTCGATTGAAGCTTTTAGATTCTTCATGGTTGACTATTTGAAAGAAAATTGAGCTATTCTATGCCAAATTATATTTGCTTGCTATGGATCATCAATGAATTGAATGCTCTAAGCCTCTAATCTAATTGATTATACTGCCCTTGAAAATTAAAAATGGAGAAACCAACACTTCGAATCTTGGAATCTGTTATCTAGTACATCAAATGAGCATTTATGCTTTTGACCATAATGTTTAGAGAAGTGCGCTATACAACCTCTCTAAATTTAAAGGCGGCACTACTATGTAATCTAAACTATTTTTCTCAGATAGTAAACTATTTTCCCTCTGCCCATGGAGCTACATACATACAGTTGGTGAACTATTTAAATCTTTCTATTGTTTCTTTTTTTATTGTTTACTCTTTTCTTTTTATCTTTATTTGTCAATTTCATAACAATTCCAAAACCGGACATGATACAAGCATGGCTGTGGCTGCATATCTAAGCTCATTAGGTTCATATTTTTAGGTCTGGAACTCTTGATTTCAGGAAAATCTATTTCTAGGAAGCCAATCCTTTCAAATAGTTGCAGAATTGAAGAATTCTAACTTGTCTGATTCTGTTACATTGGATTTGCAGTCAGAGAAGTCAAAAAAGGCCGGAAAGATTCCACCAACAACCTTGATGATTGATTTCTTGAAGGCCTCATATGGCGGTTGTTCTGACGTCATTCTTCTTGAGGAAGATGTGAATTACAATTTACGAGCATCTTCCCTGTCGGTAAGCTTCGTGTGCAATCTTTTGCCAACCATTAGCCAAGTAGGGTGTTAAAACTGCAGTTAGATCAGCTCATTGGGATGTGTGATATCTTGTCAGACATCCCAGTCCCAATTAGTTTTGTTAGAAAGAGTGGGTTTGGGTCATGATGAAAGTCCTAGGTTAGTTCACAATTTTTTATTATTTTTATTAGGCTCGTGTTGCCTATAAATATTTCCTCTTTCTACTTTTATTATTATTAGAAAATAATAAGAAACATCTATACCGTGGTTTTTTTCTTTGTACTAAGGTTTCCACGTAGACCTTGTTTTCTTTCTTAGTCTCTATTTATCGATAAGTTTAAATGGGCATGGGATTCAAAATATCTTATTCTTTACCAAACCACTGGATACCACTACTTTTCATCCTCTATTTTCTGCGTAACAACGAATCAATCCAACCAACGGTATCCTTGACTTTTTGTAACAATAATGTTAGACTATGGATGAACTCGATTTGGGTTTTACATTGAAACTGAATCAACACATTTTATTATTTGAATTGTTGATTATTTTGTATGCAGGAAGTGAGACAAGGAGGATGTTATCTTATAGTAGCAACTGACATAGTGGCCAGGGGAATTGATTTGCCTGAAACAACTCATATATACAACTTCGATCTGCCTCGATGTGCTATCGACTATCTTCATCGAGCTGGACGGACAGGTAGGAAACCATTTTCCGAGGAGAAGTGTGTGGTTACTAACCTTATAACATCAGAAGAGAGGTTTGTTCTGCAAAAATTTGAAAATGAACTGCTGTTTATCTGTGAGGAGGTGGCTGTTTAGACCATGAATCTCTAACTTCAACATTTATATGATGCCCGACCTAGGGTTGAAATTTCATGCTTATACAAACACATGATTTTAATTATAATATCCAATTCTTTCTT

mRNA sequence

ATGGCTGCAACCTTTCTTCCCACTACCAAATTCCCTCCTCCTTGGCTGCTCCTCTCATCTGAAAGGCCTTTTCCTGTTCATTTATCCTTTCAACTACCAAATTTTATCAATACCAATGGACCCATCTACTCCACCTCAAAATTTAGGCCTCTGCAAGCCCTTATGAGCTCTTCTTCTCTAAAGAACGTAGCTGAGTCCAATTTCGAGGGTTCCACTCTCCGGGAAATCTGCAATGGACGTGTTCCCGAGCATATACTGCGCAGAACTGAGGAAATTGGATTTGTTGCCCCAACTGATGTGCAGAGGCAAGCTCTCCCGGTTTTGTTTTCGGGTCGGGATTGTGTGCTTCATGCGCAGACAGGTTCTGGAAAGACACTGACATATTTGCTATTGATATTTTCTGTCATCAACGCTCATAAATCAGCTGTTCAAGCATTGATTGTAGTACCCACACGGGAGTTAGGAATGCAAGTTACAAAAGTTGCTAGGATGTTAGCCGCCAAGCCTGCTGCATCTGAAGATGGGCTAAATTCTTATGTTGTCATGGCTCTTTTAGATGGAGGCTTGTTGAGAAGACACAAGACTTGGTTAAAGGCAGATCCCCCTGAAATACTGGTGGCGACTGTAGGGAGCTTGTGCCAAATGGTAGAGAGACAGTTTCTTGACCTTGGTTCATTGAATGTGCTGGTAATTGATGAGGTTGATTTCATGTTTAGTTCCTCAAAGCAAGTTAGTTCCCTTAAAAAACTATTGACGTCATATTCTTCATTCAGTAACCGTCAGACTATTTTTGCAAGTGCGTCAATTCCACAGCATAGGCATTTTCTTCAAGATTGTATACAGCAGAAGTGGACCAAGAATACTGTTATTCATATTCATATTAACTCAACTCAGCCCATGCCATCATGTTTACTTCACAGATTTGTGACATGCGAGAAGAACAAAAAGCATCAAACCCTCCTGACCTTGTTACTAACAGATATTCCTCAGTCTGCGATCATTTTTGTCAGTGAGCAGTCAGAGAAGTCAAAAAAGGCCGGAAAGATTCCACCAACAACCTTGATGATTGATTTCTTGAAGGCCTCATATGGCGGTTGTTCTGACGTCATTCTTCTTGAGGAAGATGTGAATTACAATTTACGAGCATCTTCCCTGTCGGAAGTGAGACAAGGAGGATGTTATCTTATAGTAGCAACTGACATAGTGGCCAGGGGAATTGATTTGCCTGAAACAACTCATATATACAACTTCGATCTGCCTCGATGTGCTATCGACTATCTTCATCGAGCTGGACGGACAGGTAGGAAACCATTTTCCGAGGAGAAGTGTGTGGTTACTAACCTTATAACATCAGAAGAGAGGTTTGTTCTGCAAAAATTTGAAAATGAACTGCTGTTTATCTGTGAGGAGGTGGCTGTTTAGACCATGAATCTCTAACTTCAACATTTATATGATGCCCGACCTAGGGTTGAAATTTCATGCTTATACAAACACATGATTTTAATTATAATATCCAATTCTTTCTT

Coding sequence (CDS)

ATGGCTGCAACCTTTCTTCCCACTACCAAATTCCCTCCTCCTTGGCTGCTCCTCTCATCTGAAAGGCCTTTTCCTGTTCATTTATCCTTTCAACTACCAAATTTTATCAATACCAATGGACCCATCTACTCCACCTCAAAATTTAGGCCTCTGCAAGCCCTTATGAGCTCTTCTTCTCTAAAGAACGTAGCTGAGTCCAATTTCGAGGGTTCCACTCTCCGGGAAATCTGCAATGGACGTGTTCCCGAGCATATACTGCGCAGAACTGAGGAAATTGGATTTGTTGCCCCAACTGATGTGCAGAGGCAAGCTCTCCCGGTTTTGTTTTCGGGTCGGGATTGTGTGCTTCATGCGCAGACAGGTTCTGGAAAGACACTGACATATTTGCTATTGATATTTTCTGTCATCAACGCTCATAAATCAGCTGTTCAAGCATTGATTGTAGTACCCACACGGGAGTTAGGAATGCAAGTTACAAAAGTTGCTAGGATGTTAGCCGCCAAGCCTGCTGCATCTGAAGATGGGCTAAATTCTTATGTTGTCATGGCTCTTTTAGATGGAGGCTTGTTGAGAAGACACAAGACTTGGTTAAAGGCAGATCCCCCTGAAATACTGGTGGCGACTGTAGGGAGCTTGTGCCAAATGGTAGAGAGACAGTTTCTTGACCTTGGTTCATTGAATGTGCTGGTAATTGATGAGGTTGATTTCATGTTTAGTTCCTCAAAGCAAGTTAGTTCCCTTAAAAAACTATTGACGTCATATTCTTCATTCAGTAACCGTCAGACTATTTTTGCAAGTGCGTCAATTCCACAGCATAGGCATTTTCTTCAAGATTGTATACAGCAGAAGTGGACCAAGAATACTGTTATTCATATTCATATTAACTCAACTCAGCCCATGCCATCATGTTTACTTCACAGATTTGTGACATGCGAGAAGAACAAAAAGCATCAAACCCTCCTGACCTTGTTACTAACAGATATTCCTCAGTCTGCGATCATTTTTGTCAGTGAGCAGTCAGAGAAGTCAAAAAAGGCCGGAAAGATTCCACCAACAACCTTGATGATTGATTTCTTGAAGGCCTCATATGGCGGTTGTTCTGACGTCATTCTTCTTGAGGAAGATGTGAATTACAATTTACGAGCATCTTCCCTGTCGGAAGTGAGACAAGGAGGATGTTATCTTATAGTAGCAACTGACATAGTGGCCAGGGGAATTGATTTGCCTGAAACAACTCATATATACAACTTCGATCTGCCTCGATGTGCTATCGACTATCTTCATCGAGCTGGACGGACAGGTAGGAAACCATTTTCCGAGGAGAAGTGTGTGGTTACTAACCTTATAACATCAGAAGAGAGGTTTGTTCTGCAAAAATTTGAAAATGAACTGCTGTTTATCTGTGAGGAGGTGGCTGTTTAG

Protein sequence

MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSLKNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV*

Homology

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BLAST of MELO3C006551 vs. Swiss-Prot
Match: RH58_ARATH (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana GN=RH58 PE=2 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 9.0e-166
Identity = 295/442 (66.74%), Postives = 353/442 (79.86%), Query Frame = 1


Query: 43  YSTSKFRPLQALMSSS--SLKNVAESNFEGS-----------TLREICNGRVPEHILRRT 102
           +STS  R L++  SS   +L+ VAE++ E             TLR+IC G VPEHIL R 
Sbjct: 32  HSTSTRRALKSSPSSRIINLQAVAETSSEIESNSVTETTVPLTLRQICQGFVPEHILHRM 91

Query: 103 EEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVV 162
           EEIGFV PTD+QR+ALP LF+GRDC+LHAQTGSGKTLTYLLLIFS+IN  +S+VQA+IVV
Sbjct: 92  EEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVV 151

Query: 163 PTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATV 222
           PTRELGMQVTKVARMLAAK   SE  +    VMALLDGG LRRHK+WLKA+PP ILVATV
Sbjct: 152 PTRELGMQVTKVARMLAAK---SEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATV 211

Query: 223 GSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASI 282
            SLC M+E+    + S+ VLV+DEVDF+F SSKQV S++KLLTS+SS   RQT+FASASI
Sbjct: 212 ASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASI 271

Query: 283 PQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIP 342
           PQH+HF+ DCIQQKWTK  V+H+H+++  PMP CLLHRFV CEK  KHQ LL LL +D P
Sbjct: 272 PQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAP 331

Query: 343 QSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVR 402
           +SAIIFV EQSEKSKKAG  P TTL+++FLK SY G  +++LLE D+N+N RA+SL+E+R
Sbjct: 332 ESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIR 391

Query: 403 QGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLI 462
           QGG +L+V+TDI ARGIDLPETTHI+NFDLP+   DYLHRAGR GRKPFS+ KC+V NLI
Sbjct: 392 QGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLI 451

Query: 463 TSEERFVLQKFENELLFICEEV 472
           TSEERFVLQ++ENEL+F CEE+
Sbjct: 452 TSEERFVLQRYENELMFSCEEM 470

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BLAST of MELO3C006551 vs. Swiss-Prot
Match: RH58_ORYSJ (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0970600 PE=2 SV=2)

HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-148
Identity = 258/403 (64.02%), Postives = 325/403 (80.65%), Query Frame = 1


Query: 71  STLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLL 130
           +TLRE+C GRVPEH+L+R EE+G+V PT+VQ Q+LPVL SG+DC+LHAQTGSGKTL YLL
Sbjct: 38  ATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLL 97

Query: 131 LIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLL 190
            +FS I+  +S+VQAL+VVPTRELGMQVTKVAR+LAAK            VMALLDGG+L
Sbjct: 98  SVFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAAKACT---------VMALLDGGML 157

Query: 191 RRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKL 250
           RR K+W+KA+PP I+VATV SLCQM+E++   L S+ VLVIDEVDF+F SSKQVSSL+K+
Sbjct: 158 RRQKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKI 217

Query: 251 LTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVT 310
           LTSYS+ S+RQTIFASASIPQH  F+ DC+Q KWTK  V+H+H+N  QPMPS L H++  
Sbjct: 218 LTSYSAASSRQTIFASASIPQHNRFVHDCVQHKWTKTDVVHVHVNPVQPMPSHLQHKYAI 277

Query: 311 CEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVI 370
           C K ++   LL+LL  D P+S IIFV+EQSEKSKKAG  P TT++++FL+ +Y G  +V+
Sbjct: 278 CSKKERLHVLLSLLEKDAPKSGIIFVAEQSEKSKKAGHPPSTTVVVEFLRTTYMGSLEVL 337

Query: 371 LLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRA 430
           LLEED+N+N RA+S +EV+  G +L+V+TDI +RG DLP+T+HIYNFDLP+ AIDYLHRA
Sbjct: 338 LLEEDMNFNARATSFTEVKGKG-FLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRA 397

Query: 431 GRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 474
           GRTGR+PFS+  C VT LIT +E FVLQ+F+NEL F CEE+ V
Sbjct: 398 GRTGREPFSKLACSVTTLITEDEHFVLQRFQNELKFHCEELPV 430

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BLAST of MELO3C006551 vs. Swiss-Prot
Match: DBPA_LISMO (ATP-dependent RNA helicase DbpA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=dbpA PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.4e-33
Identity = 115/364 (31.59%), Postives = 181/364 (49.73%), Query Frame = 1


Query: 78  NGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVIN 137
           N ++ E I R   E+G+   T VQ+  +PV  +G D V  +QTGSGKT  + + I   + 
Sbjct: 3   NLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQVE 62

Query: 138 AHKSAVQALIVVPTRELGMQV----TKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRH 197
             ++  QALI+VPTREL MQV    T + R    K A            A+       + 
Sbjct: 63  WEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAA------------AIYGQSPFAKQ 122

Query: 198 KTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTS 257
           K  L +    I+V T G L   +E+  L++  +  LV+DEVD M S    +  ++ +L+ 
Sbjct: 123 KLEL-SQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMG-FIDQVEDILSR 182

Query: 258 YSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEK 317
                 RQ +F SA++P+    +QD I++      VI +    T P    + H  V  + 
Sbjct: 183 LP--KQRQNLFFSATMPEE---MQDLIKRYQDNPMVIEMASEKTNP----IFH--VEMQT 242

Query: 318 NKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKAS--YGGCSDVIL 377
           + K +TL  +L+T+ P SAIIF + +++       +   T ++D +KAS  +GG     L
Sbjct: 243 DNKEKTLKDVLITENPDSAIIFCNTKNQ-------VDELTDLLD-VKASKIHGG-----L 302

Query: 378 LEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAG 436
            +ED     R  ++ + + G    ++ATD+  RGID+   + + N+DLP    +Y+HR G
Sbjct: 303 RQED-----RFRAMDDFKSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIG 323

[Close]

BLAST of MELO3C006551 vs. Swiss-Prot
Match: CSHE_BACCR (DEAD-box ATP-dependent RNA helicase CshE OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) GN=cshE PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.5e-32
Identity = 108/353 (30.59%), Postives = 174/353 (49.29%), Query Frame = 1


Query: 84  HILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAV 143
           H LR   E G    T +Q +A+PV+ SG+D +  A+TG+GKTL ++L I   I+   S V
Sbjct: 18  HTLR---ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPECSDV 77

Query: 144 QALIVVPTRELGMQV-TKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPP 203
           QALIV PTREL +Q+ T++ +ML  +     + +N   V+A+  G  + +    LK +  
Sbjct: 78  QALIVAPTRELALQITTEIKKMLVQR-----EDIN---VLAIYGGQDVAQQLRKLKGN-T 137

Query: 204 EILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQT 263
            I+VAT G L   + R+ +DL +L+ +V+DE D M      +  ++ +L    +  ++QT
Sbjct: 138 HIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFG-FLYDIEDILD--ETPGSKQT 197

Query: 264 IFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLT 323
           +  SA++P+    L      K   +    I + S +     +  R +      K   L  
Sbjct: 198 MLFSATMPKDIKKL-----AKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRF 257

Query: 324 LLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRA 383
           ++  D P  A+IF   +   SK          + D LK     C++   L  D+    R 
Sbjct: 258 VMDRDQPFLAVIFCRTKVRASK----------LYDNLKGLGYNCAE---LHGDIPQAKRE 317

Query: 384 SSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGR 436
             +   R+     ++ATD+ ARG+D+   TH++N+D+P     Y+HR GRTGR
Sbjct: 318 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337

[Close]

BLAST of MELO3C006551 vs. Swiss-Prot
Match: CSHA_BACSU (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus subtilis (strain 168) GN=cshA PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 7.6e-32
Identity = 99/377 (26.26%), Postives = 182/377 (48.28%), Query Frame = 1


Query: 85  ILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQ 144
           +++    +GF   T +Q Q +P+  S +D +  AQTG+GKT  + + +   IN     +Q
Sbjct: 14  LMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQ 73

Query: 145 ALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEI 204
           A+++ PTREL +QV++    +     A         V+ +  G  + R    LK +P  I
Sbjct: 74  AIVIAPTRELAIQVSEELYKIGQDKRAK--------VLPIYGGQDIGRQIRALKKNP-NI 133

Query: 205 LVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIF 264
           +V T G L   + R+ + L ++N +V+DE D M +    +  ++ +L++  S    QT+ 
Sbjct: 134 IVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGF-IDDIESILSNVPS--EHQTLL 193

Query: 265 ASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLL 324
            SA++P     ++   ++  T+    H+ + + +   S +   ++  ++ KK  TL  LL
Sbjct: 194 FSATMPAP---IKRIAERFMTEPE--HVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLL 253

Query: 325 LTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASS 384
               P+ AI+F        ++  ++     +  +      G         D+    R  +
Sbjct: 254 DIQSPELAIVF----GRTKRRVDELAEALNLRGYAAEGIHG---------DLTQAKRMVA 313

Query: 385 LSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCV 444
           L + ++G   ++VATD+ ARG+D+   TH+YNFD+P+    Y+HR GRTGR   + +  +
Sbjct: 314 LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGR---AGKTGM 357

Query: 445 VTNLITSEERFVLQKFE 462
               IT  E+ +L+  E
Sbjct: 374 AMTFITPREKSMLRAIE 357

[Close]

BLAST of MELO3C006551 vs. TrEMBL
Match: A0A0A0L5M9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149880 PE=4 SV=1)

HSP 1 Score: 911.0 bits (2353), Expect = 6.1e-262
Identity = 461/473 (97.46%), Postives = 465/473 (98.31%), Query Frame = 1


Query: 1   MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSL 60
           MAATFLPTTKFPPPWLLLSSER FPVHLSFQLPNFINTNGPIYSTSK RPLQAL+SSSSL
Sbjct: 1   MAATFLPTTKFPPPWLLLSSERSFPVHLSFQLPNFINTNGPIYSTSKSRPLQALLSSSSL 60

Query: 61  KNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120
           KNVAESNFE STLREICNG VPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT
Sbjct: 61  KNVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120

Query: 121 GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180
           GSGKTLTYLLLIFSVINA KSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV
Sbjct: 121 GSGKTLTYLLLIFSVINAKKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180

Query: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240
           VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS
Sbjct: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240

Query: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM 300
           SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFL DCIQQKWTK+TV+HIHINSTQPM
Sbjct: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQQKWTKSTVVHIHINSTQPM 300

Query: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360
           PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK
Sbjct: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360

Query: 361 ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP 420
           ASYGGCSDVILLEEDVNYNLRASSLSE+RQGG YLIVATDIVARGIDLPETTHIYNFDLP
Sbjct: 361 ASYGGCSDVILLEEDVNYNLRASSLSELRQGGSYLIVATDIVARGIDLPETTHIYNFDLP 420

Query: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 474
           RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEV V
Sbjct: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVVV 473

[Close]

BLAST of MELO3C006551 vs. TrEMBL
Match: B9HV92_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s10230g PE=4 SV=2)

HSP 1 Score: 629.8 bits (1623), Expect = 2.7e-177
Identity = 309/432 (71.53%), Postives = 365/432 (84.49%), Query Frame = 1


Query: 43  YSTSKFRPLQALMSSSSLKNVAES---NFEGSTLREICNGRVPEHILRRTEEIGFVAPTD 102
           YS S FRPL+A+++S SL  VA+      E  TLREIC GRVPEH+LRR EE+G+  PTD
Sbjct: 44  YSRSSFRPLKAILNSPSLTKVADDAKEKGEALTLREICLGRVPEHLLRRVEEVGYAVPTD 103

Query: 103 VQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVT 162
           VQ+QALPVLFSGRDC+LHAQTGSGKTL YLLLIFSVIN  +SAVQALIVVPTRELG+QVT
Sbjct: 104 VQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGIQVT 163

Query: 163 KVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQ 222
           KVARMLAA P  ++    S  VMALLDGG+LRRHK+WLKA+PP I+VAT+ SLCQM+E+ 
Sbjct: 164 KVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQMLEKH 223

Query: 223 FLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDC 282
            L L S+ VLVIDEVDFMF+SSKQVSSL+KLLTSYSS ++RQT+FASASIPQH  FL DC
Sbjct: 224 LLKLESMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDC 283

Query: 283 IQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQ 342
           IQQKWTK  V+H+H+N  +PMP+CL HRFV C K ++HQTLL+LL +D P+S IIFV EQ
Sbjct: 284 IQQKWTKRDVVHVHVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFVGEQ 343

Query: 343 SEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVAT 402
           SEKSKKAG  PPT  ++DFLK SYG CS+++LLEED+N+N RA+SLSEVRQGG YL+VAT
Sbjct: 344 SEKSKKAGNGPPTIDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVAT 403

Query: 403 DIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQK 462
           DI ARG+DLPE THIYNF+LPR A+DYLHRAGRTGRKPFS+EKC VT++I  EERFVLQ+
Sbjct: 404 DIAARGVDLPEITHIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQR 463

Query: 463 FENELLFICEEV 472
           +ENEL+F CEE+
Sbjct: 464 YENELMFNCEEL 475

[Close]

BLAST of MELO3C006551 vs. TrEMBL
Match: M5XD89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005191mg PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.8e-174
Identity = 314/477 (65.83%), Postives = 379/477 (79.45%), Query Frame = 1


Query: 1   MAATFLPTTKFPPPWLLLSSERPFPVHLSFQL----PNFINTNGPIYSTSKFRPLQALMS 60
           MA   L  T+  P  L   S++P   H  FQ     P   ++NG + + S   P+QAL++
Sbjct: 1   MATATLSATQLLPLSLPKPSQKPRHAHFPFQSLNHSPRLFSSNGFVSNCS---PIQALLN 60

Query: 61  SSSLKNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVL 120
           S+ +   A S  E  TLR+IC   VP+H+L + EE+GFV PT VQRQALP LFSGRDC+L
Sbjct: 61  STPITTEAGSEPEPFTLRQICQSHVPDHVLCKMEELGFVVPTPVQRQALPTLFSGRDCIL 120

Query: 121 HAQTGSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGL 180
           HAQTGSGKTLTYLLL+FS++NA +SAVQALIVVPTRELGMQVTKVARMLA KP   E   
Sbjct: 121 HAQTGSGKTLTYLLLVFSIVNARRSAVQALIVVPTRELGMQVTKVARMLATKPKEGELEQ 180

Query: 181 NSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDF 240
            S  VMALLDGG+L RHK+WLKA+PP I+VAT+GSLCQM+E+  + L ++ VLVIDEVDF
Sbjct: 181 KSCTVMALLDGGMLMRHKSWLKAEPPTIVVATIGSLCQMLEKHMIKLEAMRVLVIDEVDF 240

Query: 241 MFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINS 300
           MFSS KQVSSL+KLLTSYSS + RQT+FASASIPQH+ FL  CIQQKWTKN  IH+H+N 
Sbjct: 241 MFSS-KQVSSLRKLLTSYSSINTRQTVFASASIPQHKIFLDKCIQQKWTKNDTIHVHVNP 300

Query: 301 TQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMI 360
            +PMPSCL HRFV C KN++H+TLL+LL +D PQSAI+FV EQSEKSKKAG     TL+I
Sbjct: 301 VEPMPSCLHHRFVICLKNRRHETLLSLLQSDAPQSAIVFVGEQSEKSKKAGNASSATLLI 360

Query: 361 DFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYN 420
           +FLKASY G SD++LLEED+N+N RA+SLSEVRQ G YL+V+TDI ARG+DLPETTHIYN
Sbjct: 361 NFLKASYEGYSDILLLEEDMNFNSRAASLSEVRQAGSYLLVSTDIAARGLDLPETTHIYN 420

Query: 421 FDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 474
           +DLPR AIDYLHRAGRTGRKPFS++KC VT++I S+ERFVL+K+ENEL+F CEE+ V
Sbjct: 421 YDLPRTAIDYLHRAGRTGRKPFSDKKCSVTSIIISKERFVLEKYENELMFNCEELIV 473

[Close]

BLAST of MELO3C006551 vs. TrEMBL
Match: B9RTX6_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_0913730 PE=4 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 5.3e-173
Identity = 306/442 (69.23%), Postives = 360/442 (81.45%), Query Frame = 1


Query: 39  NGPIYSTSKFRPLQALMSSSSLKNVAESNFEGS---------TLREICNGRVPEHILRRT 98
           N  + ST  F  LQA+++SS+     E   E           TLRE+C   VPE +L R 
Sbjct: 40  NRGLLSTLSFSHLQAVLNSSTSLITKEEEEEEQFDPKSNHFLTLRELCQNYVPEPVLHRM 99

Query: 99  EEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVV 158
           EEIG+V PTDVQRQALPVLFSG+DC+LH QTGSGKTL YLLLI+SVINA +SAVQALI+V
Sbjct: 100 EEIGYVMPTDVQRQALPVLFSGQDCILHGQTGSGKTLAYLLLIYSVINAQRSAVQALIIV 159

Query: 159 PTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATV 218
           PTRELGMQVTKVARMLAAKP           VMALLDGG+LRRHK+WLKA+PP+I+VAT+
Sbjct: 160 PTRELGMQVTKVARMLAAKPM-------DVTVMALLDGGMLRRHKSWLKAEPPKIVVATI 219

Query: 219 GSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASI 278
            SLCQM+E+    L S+ VLVIDEVDFMF+SSKQVSSL+KLLTSYSS ++RQT+FASASI
Sbjct: 220 ASLCQMLEKHIFKLDSMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASI 279

Query: 279 PQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIP 338
           PQHR FL DCIQQKWTK+  +H+HIN  QPMPSCL HRFV C KN++HQ LL+LL  D P
Sbjct: 280 PQHRRFLYDCIQQKWTKSDAVHVHINPVQPMPSCLQHRFVICSKNQRHQILLSLLQCDAP 339

Query: 339 QSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVR 398
           +S I+FV EQSEKSKKAG  PPTTL++DFL+ SY  CSD++LLEED+N+NLRA+SLSEV+
Sbjct: 340 KSGIVFVGEQSEKSKKAGHAPPTTLLVDFLETSYSDCSDILLLEEDMNFNLRAASLSEVK 399

Query: 399 QGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLI 458
           QGG YL+VATDI ARG+DLPETTHIYNF+LPR A+DYLHRAGRTGRKPFS+EKC  TN+I
Sbjct: 400 QGGGYLLVATDIAARGVDLPETTHIYNFELPRTAVDYLHRAGRTGRKPFSDEKCYATNII 459

Query: 459 TSEERFVLQKFENELLFICEEV 472
           T EERFVLQ++ENEL+F CEE+
Sbjct: 460 TPEERFVLQRYENELMFNCEEL 474

[Close]

BLAST of MELO3C006551 vs. TrEMBL
Match: A0A061EMH4_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_020550 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 6.9e-173
Identity = 300/416 (72.12%), Postives = 357/416 (85.82%), Query Frame = 1


Query: 56  SSSSLKNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCV 115
           +S  L    E+N    TLREIC   VP+H+L R EE+G+V PTDVQR+ALPVLFSG DC+
Sbjct: 56  NSVPLTKELETNCNSLTLREICQDHVPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCI 115

Query: 116 LHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDG 175
           LHAQTGSGKTLTYLLLI+SVIN  +SAVQALIVVPTRELGMQVTKVARMLAAKP   E  
Sbjct: 116 LHAQTGSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVE 175

Query: 176 LNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVD 235
             SY VMALLDGG+LRRHK+WLKA+PP I+VAT+GSL QM+E+Q   L S+ +LV+DEVD
Sbjct: 176 QKSYTVMALLDGGMLRRHKSWLKAEPPNIVVATIGSLSQMLEKQIFKLDSMRILVVDEVD 235

Query: 236 FMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHIN 295
           F+F+SSKQVSS++KLLTSYSS +NRQT+FASASIPQHR FL DCIQQKWTK  V+H+H+N
Sbjct: 236 FIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHVN 295

Query: 296 STQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLM 355
             +PMPSCLLHRFV C + +KH+ LL+LL +D+P+S IIFV+EQSEKSKKAGK P TTL+
Sbjct: 296 PVKPMPSCLLHRFVICGRKEKHRLLLSLLQSDLPESGIIFVNEQSEKSKKAGKAPSTTLI 355

Query: 356 IDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIY 415
           IDFLKASYGG  ++ILLE+++N+N RA+SLSEVRQGG +L+V+TDI ARGIDLPETT IY
Sbjct: 356 IDFLKASYGGSLEIILLEDNMNFNSRAASLSEVRQGGGHLLVSTDIAARGIDLPETTDIY 415

Query: 416 NFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEV 472
           NFDLP+ AIDYLHRAGRTGRKPFS++KC VTN+I SEERFVLQ++ENEL+F CEE+
Sbjct: 416 NFDLPKTAIDYLHRAGRTGRKPFSDKKCTVTNIILSEERFVLQRYENELMFNCEEL 471

[Close]

BLAST of MELO3C006551 vs. TAIR10
Match: AT5G19210.2 (AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 584.7 bits (1506), Expect = 5.1e-167
Identity = 295/442 (66.74%), Postives = 353/442 (79.86%), Query Frame = 1


Query: 43  YSTSKFRPLQALMSSS--SLKNVAESNFEGS-----------TLREICNGRVPEHILRRT 102
           +STS  R L++  SS   +L+ VAE++ E             TLR+IC G VPEHIL R 
Sbjct: 32  HSTSTRRALKSSPSSRIINLQAVAETSSEIESNSVTETTVPLTLRQICQGFVPEHILHRM 91

Query: 103 EEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVV 162
           EEIGFV PTD+QR+ALP LF+GRDC+LHAQTGSGKTLTYLLLIFS+IN  +S+VQA+IVV
Sbjct: 92  EEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVV 151

Query: 163 PTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATV 222
           PTRELGMQVTKVARMLAAK   SE  +    VMALLDGG LRRHK+WLKA+PP ILVATV
Sbjct: 152 PTRELGMQVTKVARMLAAK---SEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATV 211

Query: 223 GSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASI 282
            SLC M+E+    + S+ VLV+DEVDF+F SSKQV S++KLLTS+SS   RQT+FASASI
Sbjct: 212 ASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASI 271

Query: 283 PQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIP 342
           PQH+HF+ DCIQQKWTK  V+H+H+++  PMP CLLHRFV CEK  KHQ LL LL +D P
Sbjct: 272 PQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAP 331

Query: 343 QSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVR 402
           +SAIIFV EQSEKSKKAG  P TTL+++FLK SY G  +++LLE D+N+N RA+SL+E+R
Sbjct: 332 ESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIR 391

Query: 403 QGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLI 462
           QGG +L+V+TDI ARGIDLPETTHI+NFDLP+   DYLHRAGR GRKPFS+ KC+V NLI
Sbjct: 392 QGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLI 451

Query: 463 TSEERFVLQKFENELLFICEEV 472
           TSEERFVLQ++ENEL+F CEE+
Sbjct: 452 TSEERFVLQRYENELMFSCEEM 470

[Close]

BLAST of MELO3C006551 vs. TAIR10
Match: AT1G12770.1 (AT1G12770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-31
Identity = 115/439 (26.20%), Postives = 180/439 (41.00%), Query Frame = 1


Query: 81  VPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVI---- 140
           +P+ +L   E  GF  PTDVQ  A+P +  G D V+ + TGSGKTL YLL I S I    
Sbjct: 117 LPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLA 176

Query: 141 ---------NAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDG 200
                    N  ++ +QA+IV P+RELGMQ+ +    L          ++  +V  L+ G
Sbjct: 177 EKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGP-------VHRRMVQQLVGG 236

Query: 201 GLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSL 260
               R +  LK + P I+V T G + ++ +   L       LV+DEVD + S + +   +
Sbjct: 237 ANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFR-EDI 296

Query: 261 KKLLTSYSSFS------------NRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHIN 320
            ++L      S            NRQTI  SA++P    F      + W+   V+ +  N
Sbjct: 297 HRILEHVGKRSGAGPKGEVDERANRQTILVSATVP----FSVIRAAKSWSHEPVL-VQAN 356

Query: 321 STQP------------------------------MPSCLLHRFVTCEKNKKHQTLLTLLL 380
              P                              +P  L H +   +   K  TL   + 
Sbjct: 357 KVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVH 416

Query: 381 TDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSL 440
               QS I F++   +      K+    +    +    G                R++ L
Sbjct: 417 ALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLG-------------RSTVL 476

Query: 441 SEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVV 465
            + + G   ++V  ++ ARG+D+ E   + N +LP  A+ Y HRAGRTGR      K  V
Sbjct: 477 KKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGR---LGRKGTV 526

[Close]

BLAST of MELO3C006551 vs. TAIR10
Match: AT4G00660.2 (AT4G00660.2 RNAhelicase-like 8)

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-30
Identity = 106/374 (28.34%), Postives = 172/374 (45.99%), Query Frame = 1


Query: 91  EIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVVP 150
           E GF  P+ +Q +++P+  +GRD +  A+ G+GKT  + + +   I+   + +QA+I+VP
Sbjct: 148 EKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVP 207

Query: 151 TRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVG 210
           TREL +Q ++V + L         G +  + + +  GG   +        P  +LV T G
Sbjct: 208 TRELALQTSQVCKEL---------GKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPG 267

Query: 211 SLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIP 270
            +  + ++    L   +VLV+DE D + S   Q  S++ L++      +RQ +  SA+ P
Sbjct: 268 RILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQ-PSVEHLISFLP--ESRQILMFSATFP 327

Query: 271 QHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQ 330
                ++D   +  T   VI++    T      +   +   E+ +K   L TL       
Sbjct: 328 V---TVKDFKDRFLTNPYVINLMDELTL---KGITQFYAFVEERQKIHCLNTLFSKLQIN 387

Query: 331 SAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQ 390
            +IIF +  +     A KI        ++ A         +L++      R     + R 
Sbjct: 388 QSIIFCNSVNRVELLAKKITELGYSCFYIHAK--------MLQDH-----RNRVFHDFRN 447

Query: 391 GGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLIT 450
           G C  +V TD+  RGID+     + NFD P+ A  YLHR GR+GR  F      V NLIT
Sbjct: 448 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR--FGHLGLAV-NLIT 487

Query: 451 SEERFVLQKFENEL 465
            E+RF L + E EL
Sbjct: 508 YEDRFNLYRIEQEL 487

[Close]

BLAST of MELO3C006551 vs. TAIR10
Match: AT1G55150.1 (AT1G55150.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 128.6 bits (322), Expect = 9.9e-30
Identity = 104/359 (28.97%), Postives = 167/359 (46.52%), Query Frame = 1


Query: 82  PEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINA--- 141
           P+++L   ++ GF  PT +Q Q  P+   GRD +  A+TGSGKTL+YLL     +NA   
Sbjct: 107 PDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPM 166

Query: 142 --HKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTW 201
             H      L++ PTREL +Q+ +          AS+ G +S +    + GG+ +  +  
Sbjct: 167 LAHGDGPIVLVLAPTRELAVQIQQ---------EASKFGSSSKIKTTCIYGGVPKGPQVR 226

Query: 202 LKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSS 261
                 EI++AT G L  M+E    +L  +  LV+DE D M         ++K+++    
Sbjct: 227 DLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFD-PQIRKIVSHIRP 286

Query: 262 FSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKK 321
             +RQT++ SA+ P+      + + +K+  N    + I S+    +  + + V      +
Sbjct: 287 --DRQTLYWSATWPKE----VEQLSKKFLYNPY-KVIIGSSDLKANRAIRQIVDVISESQ 346

Query: 322 HQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDV 381
               L  LL DI   + I V   ++K     +I     M  +   S  G         D 
Sbjct: 347 KYNKLVKLLEDIMDGSRILVFLDTKKG--CDQITRQLRMDGWPALSIHG---------DK 406

Query: 382 NYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGR 436
           +   R   LSE R G   ++ ATD+ ARG+D+ +  ++ N+D P    DY+HR GRTGR
Sbjct: 407 SQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGR 437

[Close]

BLAST of MELO3C006551 vs. TAIR10
Match: AT3G61240.1 (AT3G61240.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-29
Identity = 110/380 (28.95%), Postives = 176/380 (46.32%), Query Frame = 1


Query: 85  ILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQ 144
           +L+   E GF  P+ +Q +++P+  +G D +  A+ G+GKT  + + +   I+ + + +Q
Sbjct: 135 LLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQ 194

Query: 145 ALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEI 204
           A+I+VPTREL +Q ++V + L+         LN  V++    GG   R        P  +
Sbjct: 195 AMILVPTRELALQTSQVCKELSKY-------LNIQVMVT--TGGTSLRDDIMRLHQPVHL 254

Query: 205 LVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIF 264
           LV T G +  + ++    L    +LV+DE D + S+  Q  SL++L+       NRQ + 
Sbjct: 255 LVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQ-PSLEELIQFLP--QNRQFLM 314

Query: 265 ASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLL 324
            SA+ P      +D   +   K  VI++ ++    M     + FV  E+ +K   L TL 
Sbjct: 315 FSATFPVTVKAFKD---RHLRKPYVINL-MDQLTLMGVTQYYAFV--EERQKVHCLNTLF 374

Query: 325 LTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASS 384
                  +IIF +  +     A KI        ++ A              +  + R   
Sbjct: 375 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK-------------MVQDHRNRV 434

Query: 385 LSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCV 444
             E R G C  +V TD+  RGID+     + NFD PR +  YLHR GR+GR  F      
Sbjct: 435 FHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGR--FGHLGLA 480

Query: 445 VTNLITSEERFVLQKFENEL 465
           V NL+T E+RF + + E EL
Sbjct: 495 V-NLVTYEDRFKMYQTEQEL 480

[Close]

BLAST of MELO3C006551 vs. NCBI nr
Match: gi|659076477|ref|XP_008438702.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 936.8 bits (2420), Expect = 1.5e-269
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1


Query: 1   MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSL 60
           MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSL
Sbjct: 1   MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSL 60

Query: 61  KNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120
           KNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT
Sbjct: 61  KNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120

Query: 121 GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180
           GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV
Sbjct: 121 GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180

Query: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240
           VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS
Sbjct: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240

Query: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM 300
           SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM
Sbjct: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM 300

Query: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360
           PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK
Sbjct: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360

Query: 361 ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP 420
           ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP
Sbjct: 361 ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP 420

Query: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 474
           RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV
Sbjct: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 473

[Close]

BLAST of MELO3C006551 vs. NCBI nr
Match: gi|778678542|ref|XP_011650984.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 911.0 bits (2353), Expect = 8.7e-262
Identity = 461/473 (97.46%), Postives = 465/473 (98.31%), Query Frame = 1


Query: 1   MAATFLPTTKFPPPWLLLSSERPFPVHLSFQLPNFINTNGPIYSTSKFRPLQALMSSSSL 60
           MAATFLPTTKFPPPWLLLSSER FPVHLSFQLPNFINTNGPIYSTSK RPLQAL+SSSSL
Sbjct: 1   MAATFLPTTKFPPPWLLLSSERSFPVHLSFQLPNFINTNGPIYSTSKSRPLQALLSSSSL 60

Query: 61  KNVAESNFEGSTLREICNGRVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120
           KNVAESNFE STLREICNG VPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT
Sbjct: 61  KNVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQALPVLFSGRDCVLHAQT 120

Query: 121 GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180
           GSGKTLTYLLLIFSVINA KSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV
Sbjct: 121 GSGKTLTYLLLIFSVINAKKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180

Query: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240
           VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS
Sbjct: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240

Query: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM 300
           SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFL DCIQQKWTK+TV+HIHINSTQPM
Sbjct: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLHDCIQQKWTKSTVVHIHINSTQPM 300

Query: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360
           PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK
Sbjct: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360

Query: 361 ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP 420
           ASYGGCSDVILLEEDVNYNLRASSLSE+RQGG YLIVATDIVARGIDLPETTHIYNFDLP
Sbjct: 361 ASYGGCSDVILLEEDVNYNLRASSLSELRQGGSYLIVATDIVARGIDLPETTHIYNFDLP 420

Query: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 474
           RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEV V
Sbjct: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVVV 473

[Close]

BLAST of MELO3C006551 vs. NCBI nr
Match: gi|659076479|ref|XP_008438703.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 695.7 bits (1794), Expect = 5.8e-197
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 1


Query: 121 GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 180
           GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV
Sbjct: 11  GSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVTKVARMLAAKPAASEDGLNSYV 70

Query: 181 VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 240
           VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS
Sbjct: 71  VMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQFLDLGSLNVLVIDEVDFMFSS 130

Query: 241 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM 300
           SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM
Sbjct: 131 SKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDCIQQKWTKNTVIHIHINSTQPM 190

Query: 301 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 360
           PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK
Sbjct: 191 PSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQSEKSKKAGKIPPTTLMIDFLK 250

Query: 361 ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP 420
           ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP
Sbjct: 251 ASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVATDIVARGIDLPETTHIYNFDLP 310

Query: 421 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 474
           RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV
Sbjct: 311 RCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQKFENELLFICEEVAV 363

[Close]

BLAST of MELO3C006551 vs. NCBI nr
Match: gi|743822091|ref|XP_011021586.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Populus euphratica])

HSP 1 Score: 631.7 bits (1628), Expect = 1.0e-177
Identity = 309/432 (71.53%), Postives = 365/432 (84.49%), Query Frame = 1


Query: 43  YSTSKFRPLQALMSSSSLKNVAES---NFEGSTLREICNGRVPEHILRRTEEIGFVAPTD 102
           YS S FRPL+A+++S SL  VA+      E  TLREIC G VPEH+LRR EE+G+  PTD
Sbjct: 44  YSRSNFRPLKAILNSPSLTKVADDAREKGEALTLREICLGHVPEHLLRRVEEVGYAVPTD 103

Query: 103 VQRQALPVLFSGRDCVLHAQTGSGKTLTYLLLIFSVINAHKSAVQALIVVPTRELGMQVT 162
           VQ+QALPVLFSGRDC+LHAQTGSGKTL YLLLIFSVIN  +SAVQ+LIVVPTRELG+QVT
Sbjct: 104 VQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQSLIVVPTRELGIQVT 163

Query: 163 KVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQMVERQ 222
           KVARMLAA P  ++    S  VMALLDGG+LRRHK+WLKA+PP I+VAT+ SLCQM+E+ 
Sbjct: 164 KVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQMLEKH 223

Query: 223 FLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHFLQDC 282
            L L S+ VLVIDEVDFMFSSSKQVSSL+KLLTSYSS ++RQT+FASASIPQH  FL DC
Sbjct: 224 LLKLESMQVLVIDEVDFMFSSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDC 283

Query: 283 IQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIFVSEQ 342
           IQQKWTK  V+H+H+N  +PMP+CL HRFV C K ++HQTLL+LL +D P+S IIFV EQ
Sbjct: 284 IQQKWTKRDVVHVHVNPIEPMPTCLQHRFVICSKKERHQTLLSLLQSDAPKSGIIFVGEQ 343

Query: 343 SEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYLIVAT 402
           SEKSKKAG  PPT  ++DFLK SYGGCS+++LLEED+N+N RA+SLSEVRQGG YL+VAT
Sbjct: 344 SEKSKKAGNGPPTVDLVDFLKTSYGGCSEILLLEEDMNFNSRAASLSEVRQGGGYLLVAT 403

Query: 403 DIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERFVLQK 462
           DI ARG+DLPE THIYNFDLPR A+DYLHRAGRTGRKPFS+EKC VT++I  EERFVLQ+
Sbjct: 404 DIAARGVDLPEITHIYNFDLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFVLQR 463

Query: 463 FENELLFICEEV 472
           +ENEL+F C+E+
Sbjct: 464 YENELMFNCDEL 475

[Close]

BLAST of MELO3C006551 vs. NCBI nr
Match: gi|659076481|ref|XP_008438704.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 630.9 bits (1626), Expect = 1.7e-177
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1


Query: 156 MQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQM 215
           MQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQM
Sbjct: 1   MQVTKVARMLAAKPAASEDGLNSYVVMALLDGGLLRRHKTWLKADPPEILVATVGSLCQM 60

Query: 216 VERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHF 275
           VERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHF
Sbjct: 61  VERQFLDLGSLNVLVIDEVDFMFSSSKQVSSLKKLLTSYSSFSNRQTIFASASIPQHRHF 120

Query: 276 LQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIF 335
           LQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIF
Sbjct: 121 LQDCIQQKWTKNTVIHIHINSTQPMPSCLLHRFVTCEKNKKHQTLLTLLLTDIPQSAIIF 180

Query: 336 VSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYL 395
           VSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYL
Sbjct: 181 VSEQSEKSKKAGKIPPTTLMIDFLKASYGGCSDVILLEEDVNYNLRASSLSEVRQGGCYL 240

Query: 396 IVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERF 455
           IVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERF
Sbjct: 241 IVATDIVARGIDLPETTHIYNFDLPRCAIDYLHRAGRTGRKPFSEEKCVVTNLITSEERF 300

Query: 456 VLQKFENELLFICEEVAV 474
           VLQKFENELLFICEEVAV
Sbjct: 301 VLQKFENELLFICEEVAV 318

The following BLAST results are available for this feature:

BLAST of MELO3C006551 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH58_ARATH	9.0e-166	66.74	DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana GN...	[more]
RH58_ORYSJ	1.0e-148	64.02	DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. jap...	[more]
DBPA_LISMO	2.4e-33	31.59	ATP-dependent RNA helicase DbpA OS=Listeria monocytogenes serovar 1/2a (strain A...	[more]
CSHE_BACCR	4.5e-32	30.59	DEAD-box ATP-dependent RNA helicase CshE OS=Bacillus cereus (strain ATCC 14579 /...	[more]
CSHA_BACSU	7.6e-32	26.26	DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus subtilis (strain 168) GN=cs...	[more]

BLAST of MELO3C006551 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5M9_CUCSA	6.1e-262	97.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G149880 PE=4 SV=1	[more]
B9HV92_POPTR	2.7e-177	71.53	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s10230g PE=4 SV=2	[more]
M5XD89_PRUPE	2.8e-174	65.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005191mg PE=4 SV=1	[more]
B9RTX6_RICCO	5.3e-173	69.23	Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_091373...	[more]
A0A061EMH4_THECC	6.9e-173	72.12	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform...	[more]

BLAST of MELO3C006551 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19210.2	5.1e-167	66.74	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT1G12770.1	6.9e-31	26.20	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT4G00660.2	7.6e-30	28.34	RNAhelicase-like 8	[more]
AT1G55150.1	9.9e-30	28.97	DEA(D/H)-box RNA helicase family protein	[more]
AT3G61240.1	1.3e-29	28.95	DEA(D/H)-box RNA helicase family protein	[more]

BLAST of MELO3C006551 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076477\|ref\|XP_008438702.1\|	1.5e-269	100.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Cuc...	[more]
gi\|778678542\|ref\|XP_011650984.1\|	8.7e-262	97.46	PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Cuc...	[more]
gi\|659076479\|ref\|XP_008438703.1\|	5.8e-197	100.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X2 [Cuc...	[more]
gi\|743822091\|ref\|XP_011021586.1\|	1.0e-177	71.53	PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Pop...	[more]
gi\|659076481\|ref\|XP_008438704.1\|	1.7e-177	100.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X3 [Cuc...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR014014	RNA_helicase_DEAD_Q_motif
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010501	RNA secondary structure unwinding
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004004	ATP-dependent RNA helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C006551T1	MELO3C006551T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 316..436 score: 5.0
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 357..437 score: 8.6
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 320..473 score: 13
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 98..271 score: 7.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 93..308 score: 3.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 105..287 score: 20
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 74..102 score: 7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 79..281 score: 1.7E-45coord: 290..464 score: 2.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 106..450 score: 1.42
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 81..471 score: 3.9E
None	No IPR available	PANTHER	PTHR24031:SF228	PROTEIN Y54G11A.3	coord: 81..471 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C006551	Csa3G149880	Cucumber (Chinese Long) v2	cumeB236
MELO3C006551	Cla021650	Watermelon (97103) v1	mewmB461
MELO3C006551	ClCG05G005310	Watermelon (Charleston Gray)	mewcgB427
MELO3C006551	Cla97C05G086620	Watermelon (97103) v2	mewmbB434
MELO3C006551	Bhi01G000617	Wax gourd	mewgoB529
MELO3C006551	CSPI03G13360	Wild cucumber (PI 183967)	cpimeB230
MELO3C006551	Cucsa.254120	Cucumber (Gy14) v1	cgymeB439
MELO3C006551	CmaCh00G003740	Cucurbita maxima (Rimu)	cmameB005
MELO3C006551	CmaCh06G014260	Cucurbita maxima (Rimu)	cmameB763
MELO3C006551	CmoCh06G014300	Cucurbita moschata (Rifu)	cmomeB755
MELO3C006551	Lsi05G014430	Bottle gourd (USVL1VR-Ls)	lsimeB369
MELO3C006551	Cp4.1LG08g04340	Cucurbita pepo (Zucchini)	cpemeB813
MELO3C006551	CsGy3G013480	Cucumber (Gy14) v2	cgybmeB200
MELO3C006551	Carg17405	Silver-seed gourd	carmeB0610
MELO3C006551	CsaV3_3G013560	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C006551	Watermelon (97103) v2	mewmbB448
MELO3C006551	Watermelon (97103) v2	mewmbB453
MELO3C006551	Wax gourd	mewgoB520
MELO3C006551	Melon (DHL92) v3.5.1	memeB091
MELO3C006551	Cucurbita maxima (Rimu)	cmameB242
MELO3C006551	Cucurbita maxima (Rimu)	cmameB342
MELO3C006551	Cucurbita maxima (Rimu)	cmameB850
MELO3C006551	Cucurbita moschata (Rifu)	cmomeB230
MELO3C006551	Cucurbita moschata (Rifu)	cmomeB335
MELO3C006551	Cucurbita moschata (Rifu)	cmomeB832
MELO3C006551	Watermelon (Charleston Gray)	mewcgB411
MELO3C006551	Watermelon (Charleston Gray)	mewcgB442
MELO3C006551	Watermelon (97103) v1	mewmB486
MELO3C006551	Watermelon (97103) v1	mewmB445
MELO3C006551	Cucurbita pepo (Zucchini)	cpemeB140
MELO3C006551	Cucurbita pepo (Zucchini)	cpemeB316
MELO3C006551	Cucurbita pepo (Zucchini)	cpemeB585
MELO3C006551	Bottle gourd (USVL1VR-Ls)	lsimeB029
MELO3C006551	Bottle gourd (USVL1VR-Ls)	lsimeB222
MELO3C006551	Silver-seed gourd	carmeB0073
MELO3C006551	Silver-seed gourd	carmeB0228
MELO3C006551	Silver-seed gourd	carmeB0332