MELO3C006448 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006448
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDNA/RNA helicase protein
Locationchr6 : 3290019 .. 3291391 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCCGACTGCACCGACTCGAGCATATGTCGAAGAGGTTGTTGATTGCATTCGACGAGGGGAAAACACGGAGTGTCCAATATGTATGGAATTTGCTGACGATGCAGTGCTCACCCCATGTGCTCACAGGATGTGTAGGGAATGTCTCCTCTCAAGCTGGAGGACCCCCACATGTGGGCTCTGCCCAATTTGTAGGCAAATGCTGAGGAAAACTGACCTCATAACATGTCCATCAGAAAACCCTTTCCGTGTGGATGTTGAGAAGAACTGGAAGGAGTCTTCAAAAGTATCAAAACTGCTTGAATGCTTGGAGCAGATTAATCAGTCGGGTTCTGGTGAAAAGAGCATTGTTTTTAGTCAGTGGACTACATTTTTTGATCTCTTGGAGATTCCCTTGAAGAGGAAAAGAATTGGATTCTTCAGATTTGATGGGAAGCTGTCGCAGAAACATAGGGAAAGAGTTCTAAAGGAGTTCAGTGAAAGCAAGGAGATAAAGGTATATTATGAAATTTACTACTCTGTTTTAAGCTTTTTTTTTTATTTCAAATTTCCAACTCTATTCCCTCTTCCAATTTTAGGTGATGCTGATCTCTCTGAAAGCTGGTGGGGTTGGATTGAATCTAACCGCGGCTTCAAATGTCTTCATAATGGTAAATCATCTTGGACTCTAGTTATTTTCTTTTCCTCAGTCAATTGCATATTAAGTTGGTATCATGATCTTAGGATCCATGGTGGAATCCTGCGGTTGAGGAACAAGCAATCATGAGGATACATCGTATTGGTCAGAAGAGGACAGTCCGTGTCAGGAGATTCATTGTCAAGGTTACACAAATCCCTCTTTCTTTCTTCTGTTGTATTTATTGTATATAAAAAATTGGACGTCATAAAAGAAACCAAATCAAAGGTCAAAAGTCAAAACTTGGTACTTTTGTTTAAAATGTGAATTTGACCACGTGGACAGGACACAGTGGAGGAACGCATGCAACAAGTTCAAGCCAGAAAGCAGCGGATGATCTCCGGTGCACTCACTGACGAGGAAGTTCGAACGGCCAGAATTGAAGAACTCAAGATGCTATTTAGATGAACATCACTTTGTTCATTTATTTTGGTTTTTATTTAATGAAATTACTCGTAAATATTATATTATTGCGATGGGTCTCTCTGTAAAAAGCCCCAATTTTTTGTAAAGTCCGCATCAGGTGAATGTCTTAGCTTAGCTGATGTTAATTTAGAAAGCAAAAGGCCTCATTTTGTTGAAAGTCTTATTTTGATAAAGACATACAAATCGAATATTCCTATTTTTGAAGAAAGTGAGAATATTTAGCACAAACAAAATAATATTAAGTTTGGAGATGAGACAGCGATTGGCCA

mRNA sequence

ATGGAGCCGACTGCACCGACTCGAGCATATGTCGAAGAGGTTGTTGATTGCATTCGACGAGGGGAAAACACGGAGTGTCCAATATGTATGGAATTTGCTGACGATGCAGTGCTCACCCCATGTGCTCACAGGATGTGTAGGGAATGTCTCCTCTCAAGCTGGAGGACCCCCACATGTGGGCTCTGCCCAATTTGTAGGCAAATGCTGAGGAAAACTGACCTCATAACATGTCCATCAGAAAACCCTTTCCGTGTGGATGTTGAGAAGAACTGGAAGGAGTCTTCAAAAGTATCAAAACTGCTTGAATGCTTGGAGCAGATTAATCAGTCGGGTTCTGGTGAAAAGAGCATTGTTTTTAGTCAGTGGACTACATTTTTTGATCTCTTGGAGATTCCCTTGAAGAGGAAAAGAATTGGATTCTTCAGATTTGATGGGAAGCTGTCGCAGAAACATAGGGAAAGAGTTCTAAAGGAGTTCAGTGAAAGCAAGGAGATAAAGGTGATGCTGATCTCTCTGAAAGCTGGTGGGGTTGGATTGAATCTAACCGCGGCTTCAAATGTCTTCATAATGGATCCATGGTGGAATCCTGCGGTTGAGGAACAAGCAATCATGAGGATACATCGTATTGGTCAGAAGAGGACAGTCCGTGTCAGGAGATTCATTGTCAAGGACACAGTGGAGGAACGCATGCAACAAGTTCAAGCCAGAAAGCAGCGGATGATCTCCGGTGCACTCACTGACGAGGAAGTTCGAACGGCCAGAATTGAAGAACTCAAGATGCTATTTAGATGAACATCACTTTGTTCATTTATTTTGGTTTTTATTTAATGAAATTACTCGTAAATATTATATTATTGCGATGGGTCTCTCTGTAAAAAGCCCCAATTTTTTGTAAAGTCCGCATCAGGTGAATGTCTTAGCTTAGCTGATGTTAATTTAGAAAGCAAAAGGCCTCATTTTGTTGAAAGTCTTATTTTGATAAAGACATACAAATCGAATATTCCTATTTTTGAAGAAAGTGAGAATATTTAGCACAAACAAAATAATATTAAGTTTGGAGATGAGACAGCGATTGGCCA

Coding sequence (CDS)

ATGGAGCCGACTGCACCGACTCGAGCATATGTCGAAGAGGTTGTTGATTGCATTCGACGAGGGGAAAACACGGAGTGTCCAATATGTATGGAATTTGCTGACGATGCAGTGCTCACCCCATGTGCTCACAGGATGTGTAGGGAATGTCTCCTCTCAAGCTGGAGGACCCCCACATGTGGGCTCTGCCCAATTTGTAGGCAAATGCTGAGGAAAACTGACCTCATAACATGTCCATCAGAAAACCCTTTCCGTGTGGATGTTGAGAAGAACTGGAAGGAGTCTTCAAAAGTATCAAAACTGCTTGAATGCTTGGAGCAGATTAATCAGTCGGGTTCTGGTGAAAAGAGCATTGTTTTTAGTCAGTGGACTACATTTTTTGATCTCTTGGAGATTCCCTTGAAGAGGAAAAGAATTGGATTCTTCAGATTTGATGGGAAGCTGTCGCAGAAACATAGGGAAAGAGTTCTAAAGGAGTTCAGTGAAAGCAAGGAGATAAAGGTGATGCTGATCTCTCTGAAAGCTGGTGGGGTTGGATTGAATCTAACCGCGGCTTCAAATGTCTTCATAATGGATCCATGGTGGAATCCTGCGGTTGAGGAACAAGCAATCATGAGGATACATCGTATTGGTCAGAAGAGGACAGTCCGTGTCAGGAGATTCATTGTCAAGGACACAGTGGAGGAACGCATGCAACAAGTTCAAGCCAGAAAGCAGCGGATGATCTCCGGTGCACTCACTGACGAGGAAGTTCGAACGGCCAGAATTGAAGAACTCAAGATGCTATTTAGATGA

Protein sequence

MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGALTDEEVRTARIEELKMLFR*
Homology
[Close]
BLAST of MELO3C006448 vs. Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.0e-118
Identity = 202/259 (77.99%), Postives = 237/259 (91.51%), Query Frame = 1 

Query: 5    APTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPI 64
            AP+RAY+EEV+  +R G + ECPIC+E ADD VLTPCAHRMCRECLL+SWR+P+CGLCPI
Sbjct: 1019 APSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPI 1078

Query: 65   CRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTT 124
            CR +L++T+LI+CP+++ FRVDV KNWKESSKVS+LL+CLE+I +SGSGEKSIVFSQWT+
Sbjct: 1079 CRTILKRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTS 1138

Query: 125  FFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAA 184
            F DLLEIPL+R+   F RFDGKL+QK RE+VLKEF+E+K+  ++L+SLKAGGVGLNLTAA
Sbjct: 1139 FLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAA 1198

Query: 185  SNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGA 244
            S+VF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVKDTVEERMQQVQARKQRMI+GA
Sbjct: 1199 SSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGA 1258

Query: 245  LTDEEVRTARIEELKMLFR 264
            LTDEEVR+AR+EELKMLFR
Sbjct: 1259 LTDEEVRSARLEELKMLFR 1277

[Close]
BLAST of MELO3C006448 vs. Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.9e-102
Identity = 180/257 (70.04%), Postives = 212/257 (82.49%), Query Frame = 1 

Query: 6    PTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPIC 65
            P+ A+V+EVV+ +R+GE  ECPIC+E  +DAVLTPCAHR+CRECLL+SWR  T GLCP+C
Sbjct: 774  PSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVC 833

Query: 66   RQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTTF 125
            R  + K +LIT P+E+ F+VDVEKNW ESSK++ LLE LE +  SGS  KSI+FSQWT F
Sbjct: 834  RNTVSKQELITAPTESRFQVDVEKNWVESSKITALLEELEGLRSSGS--KSILFSQWTAF 893

Query: 126  FDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAAS 185
             DLL+IPL R    F R DG LSQ+ RE+VLKEFSE   I V+L+SLKAGGVG+NLTAAS
Sbjct: 894  LDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAAS 953

Query: 186  NVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGAL 245
            N F+MDPWWNPAVEEQA+MRIHRIGQ + V++RRFIVK TVEERM+ VQARKQRMISGAL
Sbjct: 954  NAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGAL 1013

Query: 246  TDEEVRTARIEELKMLF 263
            TD+EVR+ARIEELKMLF
Sbjct: 1014 TDQEVRSARIEELKMLF 1028

[Close]
BLAST of MELO3C006448 vs. Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-48
Identity = 103/252 (40.87%), Postives = 151/252 (59.92%), Query Frame = 1 

Query: 21   GENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTC-GLCPICRQMLRKTDLITCPS 80
            G + EC IC++     V+T CAH  C+ C+    +       CP+CR  + + +L+ CP 
Sbjct: 755  GSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPP 814

Query: 81   ENPFRVDVEKN---WKESSKVSKLLECLEQINQSGSGEKSIVFSQWTTFFDLLEIPLKRK 140
            E   R   +K+   W  SSK++ L+  L  + +     KS+V SQ+TTF  L+EIPLK  
Sbjct: 815  EELARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKAS 874

Query: 141  RIGFFRFDGKLSQKHRERVLKEF--SESKEIKVMLISLKAGGVGLNLTAASNVFIMDPWW 200
               F R DG ++QK R   ++ F  +E+    +ML+SLKAGGVGLNL+AAS VF+MDP W
Sbjct: 875  GFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAW 934

Query: 201  NPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGAL-----TDEE 260
            NPA E+Q   R HR+GQK+ V + +FIVKD+VEE M ++Q +K+ + +GA        +E
Sbjct: 935  NPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKKPNADE 994

Query: 261  VRTARIEELKML 262
            ++ A+I E++ L
Sbjct: 995  MKQAKINEIRTL 1006

[Close]
BLAST of MELO3C006448 vs. Swiss-Prot
Match: HLTF_MOUSE (Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 6.1e-47
Identity = 106/271 (39.11%), Postives = 155/271 (57.20%), Query Frame = 1 

Query: 3    PTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTC-GL 62
            P    +  +E++   +  G + EC IC++     V+T CAH  C+ C+     +      
Sbjct: 731  PEELRKMLIEKMKIILSSGSDEECAICLDSLTFPVITHCAHVFCKPCICQVIHSEQPHAK 790

Query: 63   CPICRQMLRKTDLITCPSENPFRVDVEKN----WKESSKVSKLLECLEQINQSGSGEKSI 122
            CP+CR  +   +L+ CP E     D +K     WK SSK++ L+  L ++       KS+
Sbjct: 791  CPLCRNEIHGDNLLECPPEE-LACDSDKESSMEWKSSSKINALMHALIELRTKDPNIKSL 850

Query: 123  VFSQWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEF--SESKEIKVMLISLKAG 182
            V SQ+TTF  L+E PLK     F R DG ++QK R   ++ F  +E+    +ML+SLKAG
Sbjct: 851  VVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTIMLLSLKAG 910

Query: 183  GVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQA 242
            GVGLNL AAS VF+MDP WNPA E+Q   R HR+GQK+ V + +FIVKD+VEE M ++Q 
Sbjct: 911  GVGLNLCAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQN 970

Query: 243  RKQRMISGAL----TD-EEVRTARIEELKML 262
             K+ + +GA     TD  +++ A+I E++ L
Sbjct: 971  TKRDLAAGAFGTKKTDANDMKQAKINEIRTL 1000

[Close]
BLAST of MELO3C006448 vs. Swiss-Prot
Match: RAD5_GIBZE (DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RAD5 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-46
Identity = 111/262 (42.37%), Postives = 156/262 (59.54%), Query Frame = 1 

Query: 18   IRRGENTECPICMEFA-DDAVLTPCAHRMCRECLLSSWRTPT----CGLCPICRQMLRKT 77
            IR     ECP+C E   +D  +T C H  C++CLL   +  T       C  CR+ + K 
Sbjct: 892  IRDEAENECPLCFEEPMNDQTVTGCWHSACKKCLLDYIKHQTDKAEVPRCFSCREPINKR 951

Query: 78   DLITCP---------SENPFRVDVEKNW--KESSKVSKLLECLEQINQSGSGEKSIVFSQ 137
            DL             S+ P R+ +++      S+KV  L+  L  + +     KS+VFSQ
Sbjct: 952  DLFEVVRHDDDSDMMSKKP-RISLQRVGVNASSAKVVALMSELRALRREHPKMKSVVFSQ 1011

Query: 138  WTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNL 197
            +T+F  L+E  L R  I F R DG ++QK R  VL EF+E K   ++L+SL+AGGVGLNL
Sbjct: 1012 FTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFTEKKGFTILLLSLRAGGVGLNL 1071

Query: 198  TAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMI 257
            T+A  VF+MDPWW+ AVE QAI R+HR+GQ+  V+V+RF+VK++VEERM +VQ RK+ + 
Sbjct: 1072 TSAGRVFMMDPWWSFAVEAQAIDRVHRMGQEAEVQVKRFVVKESVEERMLKVQERKKFIA 1131

Query: 258  S--GALTDEEVRTARIEELKML 262
            +  G + DEE +  RIE++K L
Sbjct: 1132 TSLGMMNDEEKKLQRIEDIKEL 1152

[Close]
BLAST of MELO3C006448 vs. TrEMBL
Match: A0A0A0L9Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141820 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.0e-141
Identity = 250/263 (95.06%), Postives = 257/263 (97.72%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            ME  APTRAYVE+VV+CIRRGENTECPIC+EFADDAVLTPCAHRMCRECLLSSWRTPTCG
Sbjct: 851  MEQVAPTRAYVEDVVECIRRGENTECPICLEFADDAVLTPCAHRMCRECLLSSWRTPTCG 910

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
             CPICRQMLRKT+LITCPSE+PFRVDVEKNWKESSKVSKLLECLE+IN  GSGEKSIVFS
Sbjct: 911  FCPICRQMLRKTELITCPSESPFRVDVEKNWKESSKVSKLLECLERINLLGSGEKSIVFS 970

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN
Sbjct: 971  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 1030

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKR VRVRRFIVKDTVEERMQQVQARKQRM
Sbjct: 1031 LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRRVRVRRFIVKDTVEERMQQVQARKQRM 1090

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            I+GALTDEEVRTARIEELKMLFR
Sbjct: 1091 IAGALTDEEVRTARIEELKMLFR 1113

[Close]
BLAST of MELO3C006448 vs. TrEMBL
Match: A0A0D2S976_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G248800 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.1e-125
Identity = 220/263 (83.65%), Postives = 244/263 (92.78%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            +   APT+AY+EEVVD IRRGENTECPICME ADD VLTPCAHRMCRECLLSSWRTPT G
Sbjct: 850  LNQNAPTKAYIEEVVDGIRRGENTECPICMESADDPVLTPCAHRMCRECLLSSWRTPTLG 909

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
             CPICR +L+KTDLITCP+EN FRVD++KNWKESSKVSKLL+CLE+  QSGSGEKSIVFS
Sbjct: 910  SCPICRTLLKKTDLITCPTENKFRVDIDKNWKESSKVSKLLDCLERSCQSGSGEKSIVFS 969

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWT+F DLLEIPLKRK IGF RFDGKL+QK RERVLKEF++++E  V+L+SLKAGGVGLN
Sbjct: 970  QWTSFLDLLEIPLKRKGIGFLRFDGKLAQKQRERVLKEFNDTREKLVLLMSLKAGGVGLN 1029

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVK+TVEERMQQVQARK++M
Sbjct: 1030 LTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKETVEERMQQVQARKEKM 1089

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            I+GALTDEEVR+ARIEELKMLFR
Sbjct: 1090 IAGALTDEEVRSARIEELKMLFR 1112

[Close]
BLAST of MELO3C006448 vs. TrEMBL
Match: A0A0B0NXN1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_10174 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 2.1e-123
Identity = 217/263 (82.51%), Postives = 242/263 (92.02%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            +   APT+AY+EEVVD IRRGENTECPICME ADD VLTPCAHRMCRECLLSSWR PT G
Sbjct: 847  LNQNAPTKAYIEEVVDGIRRGENTECPICMESADDPVLTPCAHRMCRECLLSSWRIPTLG 906

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
             CPICR +L+KTDLITCP+EN FRVD++KNWKESSKVSKLL+CLE+  +SGS EKSIVFS
Sbjct: 907  SCPICRTLLKKTDLITCPTENKFRVDIDKNWKESSKVSKLLDCLERSRRSGSDEKSIVFS 966

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWT+F DLLEIPLKRK IGF RFDGKL+QK RERVLKEF++++E  V+L+SLKAGGVGLN
Sbjct: 967  QWTSFLDLLEIPLKRKGIGFLRFDGKLAQKQRERVLKEFNDTREKLVLLMSLKAGGVGLN 1026

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVK+TVEERMQQVQARK++M
Sbjct: 1027 LTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKETVEERMQQVQARKEKM 1086

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            I+GALTDEEVR+ARIEELKMLFR
Sbjct: 1087 IAGALTDEEVRSARIEELKMLFR 1109

[Close]
BLAST of MELO3C006448 vs. TrEMBL
Match: B9STJ2_RICCO (DNA repair helicase rad5,16, putative OS=Ricinus communis GN=RCOM_0492090 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.6e-123
Identity = 216/262 (82.44%), Postives = 240/262 (91.60%), Query Frame = 1 

Query: 2    EPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGL 61
            E T PT AY+EEVV+ IR+GEN ECPICME+ADD VLTPCAHRMCRECLLSSWRTPT GL
Sbjct: 790  EQTVPTPAYIEEVVEDIRKGENNECPICMEYADDPVLTPCAHRMCRECLLSSWRTPTTGL 849

Query: 62   CPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQ 121
            CPICR +L+K DL+TCP+EN FRV+VE+NWKESSKVSKLLECLE+I +S  GEKSI+FSQ
Sbjct: 850  CPICRTLLKKADLLTCPTENKFRVNVEENWKESSKVSKLLECLERIRRSDCGEKSIIFSQ 909

Query: 122  WTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNL 181
            WT+F DLLEIPL+R+ IGF RFDGKL QK RER LKEF+E+KE  V+L+SLKAGGVGLNL
Sbjct: 910  WTSFLDLLEIPLRRRAIGFLRFDGKLVQKQRERTLKEFNETKEKMVLLMSLKAGGVGLNL 969

Query: 182  TAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMI 241
            TAASNVF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVKDT+EERMQQVQARKQRMI
Sbjct: 970  TAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKDTLEERMQQVQARKQRMI 1029

Query: 242  SGALTDEEVRTARIEELKMLFR 264
            +GALTDEEVR+ARIEELKMLFR
Sbjct: 1030 AGALTDEEVRSARIEELKMLFR 1051

[Close]
BLAST of MELO3C006448 vs. TrEMBL
Match: A0A068TTE9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026258001 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 8.1e-123
Identity = 216/258 (83.72%), Postives = 241/258 (93.41%), Query Frame = 1 

Query: 6   PTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPIC 65
           P+RAYVEEVV+ IR+GEN ECPIC+E ADD VLTPCAHRMCRECLLSSWR+PT G CPIC
Sbjct: 272 PSRAYVEEVVEGIRKGENAECPICLESADDPVLTPCAHRMCRECLLSSWRSPTAGACPIC 331

Query: 66  RQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTTF 125
           RQ+ +KT++ITCPSEN FRVDVEKNWKESSKVSKLL+CLE++ +SGSGEKSIVFSQWT+F
Sbjct: 332 RQVFKKTEIITCPSENRFRVDVEKNWKESSKVSKLLDCLERLRKSGSGEKSIVFSQWTSF 391

Query: 126 FDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAAS 185
            DLLEIPLKR+RIGF RFDG+LSQK RE VL+EF+E+ E  V+L+SLKAGGVGLNLTAAS
Sbjct: 392 LDLLEIPLKRRRIGFLRFDGRLSQKQREIVLREFNETGEKMVLLMSLKAGGVGLNLTAAS 451

Query: 186 NVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGAL 245
           NVF+MDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVK TVEER+QQVQARKQRMI+GAL
Sbjct: 452 NVFLMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKGTVEERLQQVQARKQRMIAGAL 511

Query: 246 TDEEVRTARIEELKMLFR 264
           TDEEVR+ARIEELKMLFR
Sbjct: 512 TDEEVRSARIEELKMLFR 529

[Close]
BLAST of MELO3C006448 vs. TAIR10
Match: AT5G43530.1 (AT5G43530.1 Helicase protein with RING/U-box domain)

HSP 1 Score: 426.0 bits (1094), Expect = 1.7e-119
Identity = 202/259 (77.99%), Postives = 237/259 (91.51%), Query Frame = 1 

Query: 5    APTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPI 64
            AP+RAY+EEV+  +R G + ECPIC+E ADD VLTPCAHRMCRECLL+SWR+P+CGLCPI
Sbjct: 1019 APSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPI 1078

Query: 65   CRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTT 124
            CR +L++T+LI+CP+++ FRVDV KNWKESSKVS+LL+CLE+I +SGSGEKSIVFSQWT+
Sbjct: 1079 CRTILKRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTS 1138

Query: 125  FFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAA 184
            F DLLEIPL+R+   F RFDGKL+QK RE+VLKEF+E+K+  ++L+SLKAGGVGLNLTAA
Sbjct: 1139 FLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAA 1198

Query: 185  SNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGA 244
            S+VF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVKDTVEERMQQVQARKQRMI+GA
Sbjct: 1199 SSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRMIAGA 1258

Query: 245  LTDEEVRTARIEELKMLFR 264
            LTDEEVR+AR+EELKMLFR
Sbjct: 1259 LTDEEVRSARLEELKMLFR 1277

[Close]
BLAST of MELO3C006448 vs. TAIR10
Match: AT5G22750.1 (AT5G22750.1 DNA/RNA helicase protein)

HSP 1 Score: 372.5 bits (955), Expect = 2.2e-103
Identity = 180/257 (70.04%), Postives = 212/257 (82.49%), Query Frame = 1 

Query: 6    PTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPIC 65
            P+ A+V+EVV+ +R+GE  ECPIC+E  +DAVLTPCAHR+CRECLL+SWR  T GLCP+C
Sbjct: 774  PSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVC 833

Query: 66   RQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTTF 125
            R  + K +LIT P+E+ F+VDVEKNW ESSK++ LLE LE +  SGS  KSI+FSQWT F
Sbjct: 834  RNTVSKQELITAPTESRFQVDVEKNWVESSKITALLEELEGLRSSGS--KSILFSQWTAF 893

Query: 126  FDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAAS 185
             DLL+IPL R    F R DG LSQ+ RE+VLKEFSE   I V+L+SLKAGGVG+NLTAAS
Sbjct: 894  LDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAAS 953

Query: 186  NVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGAL 245
            N F+MDPWWNPAVEEQA+MRIHRIGQ + V++RRFIVK TVEERM+ VQARKQRMISGAL
Sbjct: 954  NAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGAL 1013

Query: 246  TDEEVRTARIEELKMLF 263
            TD+EVR+ARIEELKMLF
Sbjct: 1014 TDQEVRSARIEELKMLF 1028

[Close]
BLAST of MELO3C006448 vs. TAIR10
Match: AT5G05130.1 (AT5G05130.1 DNA/RNA helicase protein)

HSP 1 Score: 185.3 bits (469), Expect = 5.0e-47
Identity = 101/250 (40.40%), Postives = 148/250 (59.20%), Query Frame = 1 

Query: 11  VEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPICRQMLR 70
           ++++V  ++ GE+ +CPIC+    + ++T CAH  CR C+L + +     LCP+CR  L 
Sbjct: 601 LQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSK-PLCPLCRGSLT 660

Query: 71  KTDLITCPSENPFRVDVE----KNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTTFF 130
           ++DL   P   P   + +    K+  +SSKVS LL  L    Q     KS+VFSQ+    
Sbjct: 661 QSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVFSQFRKML 720

Query: 131 DLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFS--ESKEIKVMLISLKAGGVGLNLTAA 190
            LLE PLK       R DG ++ K R +V+ EF   E     V+L SLKA G G+NLTAA
Sbjct: 721 LLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAA 780

Query: 191 SNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGA 250
           S V++ DPWWNPAVEEQA+ RIHRIGQK+ V++ R I ++++EER+ ++Q +K+ + + A
Sbjct: 781 SRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEA 840

Query: 251 LTDEEVRTAR 255
               + +  R
Sbjct: 841 FKRRQKKDER 849

[Close]
BLAST of MELO3C006448 vs. TAIR10
Match: AT1G05120.1 (AT1G05120.1 Helicase protein with RING/U-box domain)

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-41
Identity = 92/253 (36.36%), Postives = 143/253 (56.52%), Query Frame = 1 

Query: 25  ECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPICRQMLRKTDLITCPSENPFR 84
           EC +C + A+D V+T CAH  C+ CL+    +     CP C ++L         +E+   
Sbjct: 578 ECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKADTEHKAS 637

Query: 85  VDVEKNWKESSKVSKL----------LECLEQ-----INQSGSGEKSIVFSQWTTFFDLL 144
               K ++ SS ++++          +E L +     + + GS  K+IVFSQ+T+F DL+
Sbjct: 638 KTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMVERDGSA-KAIVFSQFTSFLDLI 697

Query: 145 EIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAASNVFI 204
              L +  +   +  G ++   R+  + +F E  + +V L+SLKAGGV LNLT AS+VF+
Sbjct: 698 NYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHVFM 757

Query: 205 MDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGALTDEE 263
           MDPWWNPAVE QA  RIHRIGQ + +RV RFI+++TVEER+ ++Q +K+ +  G +   +
Sbjct: 758 MDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVGGSQ 817

[Close]
BLAST of MELO3C006448 vs. TAIR10
Match: AT3G20010.1 (AT3G20010.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related)

HSP 1 Score: 144.8 bits (364), Expect = 7.4e-35
Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1 

Query: 104  LEQINQSGSGEKSIVFSQWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESK 163
            L   + S    K+I+FSQWT   DL+E+ +    I F R DG +S   R+R +KEFS+  
Sbjct: 883  LHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKP 942

Query: 164  EIKVMLISLKAGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVK 223
            ++KVML+SLKAG +GLN+ AA +V ++D WWNP  E+QAI R HRIGQ R V V R  +K
Sbjct: 943  DVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIK 1002

Query: 224  DTVEERMQQVQARKQRMISGALTDE----EVRTARIEELKMLF 263
            DTVE+R+ ++Q  K+ M++ A  +E          +++LK LF
Sbjct: 1003 DTVEDRILKLQEEKRTMVASAFGEEHGGSSATRLTVDDLKYLF 1045


HSP 2 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 93/296 (31.42%), Postives = 139/296 (46.96%), Query Frame = 1 

Query: 26   CPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPI--CRQMLRK------TDLITC 85
            C  C E  +  V+T C H  C EC+L  + T     CP+  C+Q L +      + L  C
Sbjct: 751  CYECNEPPEKPVVTLCGHIFCYECVL-EYITGDENTCPVPRCKQQLARDVVFSESSLRNC 810

Query: 86   PSENPFRVDVEKNWKE----------SSKVSKLLECLEQINQ---SGSGEKSIVFSQWTT 145
             S++        N  +          SSK+  +L+ L+ ++Q     S +   + S    
Sbjct: 811  TSDDSGCSSSHDNGLDRSVFQKRDFCSSKIKAVLDILQSLSQPDSPNSAQHGQMPSSSRP 870

Query: 146  FFD---LLEIPLKR----------KRIGFF---------------------RFDGKLSQK 205
            + D    +  P++           K I F                      R DG +S  
Sbjct: 871  YDDDDVTIVEPMRLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLA 930

Query: 206  HRERVLKEFSESKEIKVMLISLKAGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIG 263
             R+R +KEFS+  ++KVML+SLKAG +GLN+ AA +V ++D WWNP  E+QAI R HRIG
Sbjct: 931  ARDRAVKEFSKKPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIG 990

[Close]
BLAST of MELO3C006448 vs. NCBI nr
Match: gi|659076202|ref|XP_008438555.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Cucumis melo])

HSP 1 Score: 534.6 bits (1376), Expect = 9.5e-149
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG
Sbjct: 854  MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 913

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
            LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS
Sbjct: 914  LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 973

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN
Sbjct: 974  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 1033

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM
Sbjct: 1034 LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 1093

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            ISGALTDEEVRTARIEELKMLFR
Sbjct: 1094 ISGALTDEEVRTARIEELKMLFR 1116

[Close]
BLAST of MELO3C006448 vs. NCBI nr
Match: gi|449433265|ref|XP_004134418.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 1.5e-141
Identity = 250/263 (95.06%), Postives = 257/263 (97.72%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            ME  APTRAYVE+VV+CIRRGENTECPIC+EFADDAVLTPCAHRMCRECLLSSWRTPTCG
Sbjct: 851  MEQVAPTRAYVEDVVECIRRGENTECPICLEFADDAVLTPCAHRMCRECLLSSWRTPTCG 910

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
             CPICRQMLRKT+LITCPSE+PFRVDVEKNWKESSKVSKLLECLE+IN  GSGEKSIVFS
Sbjct: 911  FCPICRQMLRKTELITCPSESPFRVDVEKNWKESSKVSKLLECLERINLLGSGEKSIVFS 970

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN
Sbjct: 971  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 1030

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKR VRVRRFIVKDTVEERMQQVQARKQRM
Sbjct: 1031 LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRRVRVRRFIVKDTVEERMQQVQARKQRM 1090

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            I+GALTDEEVRTARIEELKMLFR
Sbjct: 1091 IAGALTDEEVRTARIEELKMLFR 1113

[Close]
BLAST of MELO3C006448 vs. NCBI nr
Match: gi|823178825|ref|XP_012487271.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 isoform X1 [Gossypium raimondii])

HSP 1 Score: 455.3 bits (1170), Expect = 7.3e-125
Identity = 220/263 (83.65%), Postives = 244/263 (92.78%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            +   APT+AY+EEVVD IRRGENTECPICME ADD VLTPCAHRMCRECLLSSWRTPT G
Sbjct: 851  LNQNAPTKAYIEEVVDGIRRGENTECPICMESADDPVLTPCAHRMCRECLLSSWRTPTLG 910

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
             CPICR +L+KTDLITCP+EN FRVD++KNWKESSKVSKLL+CLE+  QSGSGEKSIVFS
Sbjct: 911  SCPICRTLLKKTDLITCPTENKFRVDIDKNWKESSKVSKLLDCLERSCQSGSGEKSIVFS 970

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWT+F DLLEIPLKRK IGF RFDGKL+QK RERVLKEF++++E  V+L+SLKAGGVGLN
Sbjct: 971  QWTSFLDLLEIPLKRKGIGFLRFDGKLAQKQRERVLKEFNDTREKLVLLMSLKAGGVGLN 1030

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVK+TVEERMQQVQARK++M
Sbjct: 1031 LTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKETVEERMQQVQARKEKM 1090

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            I+GALTDEEVR+ARIEELKMLFR
Sbjct: 1091 IAGALTDEEVRSARIEELKMLFR 1113

[Close]
BLAST of MELO3C006448 vs. NCBI nr
Match: gi|823178828|ref|XP_012487273.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 isoform X2 [Gossypium raimondii])

HSP 1 Score: 455.3 bits (1170), Expect = 7.3e-125
Identity = 220/263 (83.65%), Postives = 244/263 (92.78%), Query Frame = 1 

Query: 1    MEPTAPTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCG 60
            +   APT+AY+EEVVD IRRGENTECPICME ADD VLTPCAHRMCRECLLSSWRTPT G
Sbjct: 850  LNQNAPTKAYIEEVVDGIRRGENTECPICMESADDPVLTPCAHRMCRECLLSSWRTPTLG 909

Query: 61   LCPICRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFS 120
             CPICR +L+KTDLITCP+EN FRVD++KNWKESSKVSKLL+CLE+  QSGSGEKSIVFS
Sbjct: 910  SCPICRTLLKKTDLITCPTENKFRVDIDKNWKESSKVSKLLDCLERSCQSGSGEKSIVFS 969

Query: 121  QWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLN 180
            QWT+F DLLEIPLKRK IGF RFDGKL+QK RERVLKEF++++E  V+L+SLKAGGVGLN
Sbjct: 970  QWTSFLDLLEIPLKRKGIGFLRFDGKLAQKQRERVLKEFNDTREKLVLLMSLKAGGVGLN 1029

Query: 181  LTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRM 240
            LTAASNVF+MDPWWNPAVEEQAIMRIHRIGQKRTV VRRFIVK+TVEERMQQVQARK++M
Sbjct: 1030 LTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKETVEERMQQVQARKEKM 1089

Query: 241  ISGALTDEEVRTARIEELKMLFR 264
            I+GALTDEEVR+ARIEELKMLFR
Sbjct: 1090 IAGALTDEEVRSARIEELKMLFR 1112

[Close]
BLAST of MELO3C006448 vs. NCBI nr
Match: gi|697138409|ref|XP_009623281.1| (PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Nicotiana tomentosiformis])

HSP 1 Score: 453.0 bits (1164), Expect = 3.6e-124
Identity = 220/259 (84.94%), Postives = 238/259 (91.89%), Query Frame = 1 

Query: 5    APTRAYVEEVVDCIRRGENTECPICMEFADDAVLTPCAHRMCRECLLSSWRTPTCGLCPI 64
            APT AYVEEVV+ IR GENTECPIC+E ADD VLTPCAHRMCRECLLSSWRTPT GLCPI
Sbjct: 925  APTPAYVEEVVEGIRYGENTECPICLESADDPVLTPCAHRMCRECLLSSWRTPTSGLCPI 984

Query: 65   CRQMLRKTDLITCPSENPFRVDVEKNWKESSKVSKLLECLEQINQSGSGEKSIVFSQWTT 124
            CRQMLRK +L TCPSEN FR+DVEKNW+ESSKVSKLLECLE I ++G GEKSIVFSQWT+
Sbjct: 985  CRQMLRKNELFTCPSENRFRIDVEKNWQESSKVSKLLECLESIRKTGCGEKSIVFSQWTS 1044

Query: 125  FFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAA 184
            F DLLEIPLKRK+IG+ RFDGKL QK RERVLKEFSE+ E  ++L+SLKAGGVGLNLTAA
Sbjct: 1045 FLDLLEIPLKRKKIGYLRFDGKLVQKQRERVLKEFSETNEKTILLMSLKAGGVGLNLTAA 1104

Query: 185  SNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVRVRRFIVKDTVEERMQQVQARKQRMISGA 244
            SNVF+MDPWWNPAVEEQAIMRIHRIGQK TVRVRRFIVKDTVEERMQQVQ RKQRMI+GA
Sbjct: 1105 SNVFLMDPWWNPAVEEQAIMRIHRIGQKNTVRVRRFIVKDTVEERMQQVQGRKQRMIAGA 1164

Query: 245  LTDEEVRTARIEELKMLFR 264
            LTDEEVR+AR+EELKMLFR
Sbjct: 1165 LTDEEVRSARLEELKMLFR 1183

The following BLAST results are available for this feature:
BLAST of MELO3C006448 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SM3L3_ARATH3.0e-11877.99Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati... [more]
SM3L2_ARATH3.9e-10270.04Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati... [more]
HLTF_HUMAN3.2e-4840.87Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2[more]
HLTF_MOUSE6.1e-4739.11Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1[more]
RAD5_GIBZE1.0e-4642.37DNA repair protein RAD5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9... [more]
BLAST of MELO3C006448 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9Y2_CUCSA1.0e-14195.06Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141820 PE=4 SV=1[more]
A0A0D2S976_GOSRA5.1e-12583.65Uncharacterized protein OS=Gossypium raimondii GN=B456_006G248800 PE=4 SV=1[more]
A0A0B0NXN1_GOSAR2.1e-12382.51Uncharacterized protein OS=Gossypium arboreum GN=F383_10174 PE=4 SV=1[more]
B9STJ2_RICCO3.6e-12382.44DNA repair helicase rad5,16, putative OS=Ricinus communis GN=RCOM_0492090 PE=4 S... [more]
A0A068TTE9_COFCA8.1e-12383.72Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026258001 PE=4 SV=1[more]
BLAST of MELO3C006448 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G43530.11.7e-11977.99 Helicase protein with RING/U-box domain[more]
AT5G22750.12.2e-10370.04 DNA/RNA helicase protein[more]
AT5G05130.15.0e-4740.40 DNA/RNA helicase protein[more]
AT1G05120.13.1e-4136.36 Helicase protein with RING/U-box domain[more]
AT3G20010.17.4e-3544.79 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
BLAST of MELO3C006448 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076202|ref|XP_008438555.1|9.5e-149100.00PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ... [more]
gi|449433265|ref|XP_004134418.1|1.5e-14195.06PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ... [more]
gi|823178825|ref|XP_012487271.1|7.3e-12583.65PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ... [more]
gi|823178828|ref|XP_012487273.1|7.3e-12583.65PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ... [more]
gi|697138409|ref|XP_009623281.1|3.6e-12484.94PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006448T1MELO3C006448T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 99..210
score: 7.6
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 127..210
score: 3.3
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 96..258
score: 15
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 26..65
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 26..66
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 22..78
score: 2.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 41..50
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 90..239
score: 1.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 87..254
score: 6.2
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 86..263
score: 5.9E-149coord: 38..65
score: 5.9E
NoneNo IPR availablePANTHERPTHR10799:SF779SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATEDcoord: 38..65
score: 5.9E-149coord: 86..263
score: 5.9E
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 23..71
score: 3.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 23..76
score: 7.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006448Cucurbita moschata (Rifu)cmomeB230
MELO3C006448Cucurbita moschata (Rifu)cmomeB474
MELO3C006448Cucurbita moschata (Rifu)cmomeB832
MELO3C006448Cucurbita moschata (Rifu)cmomeB755
MELO3C006448Wild cucumber (PI 183967)cpimeB144
MELO3C006448Wild cucumber (PI 183967)cpimeB230
MELO3C006448Cucumber (Chinese Long) v2cumeB145
MELO3C006448Cucumber (Chinese Long) v2cumeB236
MELO3C006448Watermelon (Charleston Gray)mewcgB427
MELO3C006448Watermelon (Charleston Gray)mewcgB441
MELO3C006448Watermelon (Charleston Gray)mewcgB445
MELO3C006448Watermelon (97103) v1mewmB486
MELO3C006448Watermelon (97103) v1mewmB459
MELO3C006448Watermelon (97103) v1mewmB461
MELO3C006448Cucurbita pepo (Zucchini)cpemeB316
MELO3C006448Cucurbita pepo (Zucchini)cpemeB585
MELO3C006448Cucurbita pepo (Zucchini)cpemeB702
MELO3C006448Cucurbita pepo (Zucchini)cpemeB813
MELO3C006448Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006448Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006448Bottle gourd (USVL1VR-Ls)lsimeB382
MELO3C006448Cucumber (Gy14) v2cgybmeB126
MELO3C006448Cucumber (Gy14) v2cgybmeB200
MELO3C006448Silver-seed gourdcarmeB0236
MELO3C006448Silver-seed gourdcarmeB0240
MELO3C006448Silver-seed gourdcarmeB0749
MELO3C006448Silver-seed gourdcarmeB0941
MELO3C006448Silver-seed gourdcarmeB1050
MELO3C006448Cucumber (Chinese Long) v3cucmeB147
MELO3C006448Cucumber (Chinese Long) v3cucmeB236
MELO3C006448Watermelon (97103) v2mewmbB434
MELO3C006448Watermelon (97103) v2mewmbB448
MELO3C006448Watermelon (97103) v2mewmbB451
MELO3C006448Wax gourdmewgoB514
MELO3C006448Wax gourdmewgoB552
MELO3C006448Wax gourdmewgoB556
MELO3C006448Melon (DHL92) v3.5.1memeB147
MELO3C006448Cucumber (Gy14) v1cgymeB439
MELO3C006448Cucumber (Gy14) v1cgymeB625
MELO3C006448Cucurbita maxima (Rimu)cmameB002
MELO3C006448Cucurbita maxima (Rimu)cmameB242
MELO3C006448Cucurbita maxima (Rimu)cmameB482
MELO3C006448Cucurbita maxima (Rimu)cmameB763
MELO3C006448Cucurbita maxima (Rimu)cmameB850