MELO3C006386 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006386
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionActin-related protein 2/3 complex subunit 2
Locationchr6 : 2946663 .. 2947772 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACAAAGAACGTAGAGAAGGCTGTTTGTTCTTGTGAGGATGGCATGCTTTCAAAGAGCTTCACCAGCTTTGAAGGAGATCCTCCTTAAACTGTACAGGTGAGAAACAAGTTCACGTGTACGTAAACTGATGAGCATCAGTATATGCTGAAATTCTTTGAACTCCATGGGTTCGTTGAGGGAGAAATTGAGTTTTGTTGAGACTTTAAATAGGTTTTAGTCGTTAGGCATTAAATTGTATATGTTGTGTTGGAAAATAGATCTTTTGAAGGTTTTTGTTGGGTATGATTGCAGTTTGGAAAAACCCACTGAAATTGAGCATCACTTGCATGAATATGGTTCTGTTCAGTACCATATCCAGGTACAGCCATTGTCATTCACCTGGGATTATGCCTGTTGAACATTTGAAATAATGTCCTGATGGCTTGCTGATTGTTTGGTAGTCTTCCGTACCGGATCCGCAGCACATTTACTTGTCAATTGCCACTCCATTGTTGTCGCAAGGGGTTCTTTTATCTGATGGGCTCTCACCCTACACTGTTGAGATGGTAAAACAAATCTTCTCTCATGCTGTTGAGATCATTGAACCTGCAAAAGAAGGATACGAACTTACTCTAAGAATCGACTCTGCAAAAATTTTGCATGGGGAAGGTAGTTTCATACTTGAACAGCTTCATTAGATAGAAAACTAGTTGATGGAAAAGGTTAGTGTCAATGCTACATAGTTTCAGAAATAAAAGATAAATTTTTTACTACTTGACGATCTCCGGAAGATTGTGCTTAGGCTTATACTTGTCCTGCTATCCCGAGAGTCCTGATAACTATAGTATCAAATTGAAATGTGGGCCTTCTCATAAGTCATAACGTTGATTGCTTGATGTGGATCTACATTTTGCAGAGTCAGAAAAGATCATTACAGACATTGCTGCTGTTCAAGCAGTGATCATAAGTTCTCAGCTGAAAGAAGTATTGAGAAATGTTAATTCACCGACTCTATTTCAAGGAATCTCTAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTCGTCAAGCAGGCAAGTCAGAATTATTTTGTTCCCTTTAATCTGAAACTCTGA

mRNA sequence

ATGAAAACAAAGAACGTAGAGAAGGCTGTTTGTTCTTGTGAGGATGGCATGCTTTCAAAGAGCTTCACCAGCTTTGAAGGAGATCCTCCTTAAACTGTACAGTTTGGAAAAACCCACTGAAATTGAGCATCACTTGCATGAATATGGTTCTGTTCAGTACCATATCCAGTCTTCCGTACCGGATCCGCAGCACATTTACTTGTCAATTGCCACTCCATTGTTGTCGCAAGGGGTTCTTTTATCTGATGGGCTCTCACCCTACACTGTTGAGATGGTAAAACAAATCTTCTCTCATGCTGTTGAGATCATTGAACCTGCAAAAGAAGGATACGAACTTACTCTAAGAATCGACTCTGCAAAAATTTTGCATGGGGAAGAGTCAGAAAAGATCATTACAGACATTGCTGCTGTTCAAGCAGTGATCATAAGTTCTCAGCTGAAAGAAGTATTGAGAAATGTTAATTCACCGACTCTATTTCAAGGAATCTCTAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTCGTCAAGCAGGCAAGTCAGAATTATTTTGTTCCCTTTAATCTGAAACTCTGA

Coding sequence (CDS)

ATGGCATGCTTTCAAAGAGCTTCACCAGCTTTGAAGGAGATCCTCCTTAAACTGTACAGTTTGGAAAAACCCACTGAAATTGAGCATCACTTGCATGAATATGGTTCTGTTCAGTACCATATCCAGTCTTCCGTACCGGATCCGCAGCACATTTACTTGTCAATTGCCACTCCATTGTTGTCGCAAGGGGTTCTTTTATCTGATGGGCTCTCACCCTACACTGTTGAGATGGTAAAACAAATCTTCTCTCATGCTGTTGAGATCATTGAACCTGCAAAAGAAGGATACGAACTTACTCTAAGAATCGACTCTGCAAAAATTTTGCATGGGGAAGAGTCAGAAAAGATCATTACAGACATTGCTGCTGTTCAAGCAGTGATCATAAGTTCTCAGCTGAAAGAAGTATTGAGAAATGTTAATTCACCGACTCTATTTCAAGGAATCTCTAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTCGTCAAGCAGGCAAGTCAGAATTATTTTGTTCCCTTTAATCTGAAACTCTGA

Protein sequence

MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLLSQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDIAAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQASQNYFVPFNLKL*
Homology
[Close]
BLAST of MELO3C006386 vs. Swiss-Prot
Match: ARC2B_ARATH (Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana GN=ARPC2B PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 86/185 (46.49%), Postives = 124/185 (67.03%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MA  +RASP LKE LLK+Y  EKP E++ H HE+GS++YHI+ SV DP  +++S +T L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           +QG +    +S YT E++K I    ++I++P + G++LTL ++   I  G+E+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISR-----PIKLVYHPREPFFVVKQASQNYFV- 180
           + +QA+I+SSQLKE+LR++N    FQ  SR     PI++VYHP EPF+V KQ  +   V 
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

[Close]
BLAST of MELO3C006386 vs. Swiss-Prot
Match: ARC2A_ARATH (Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana GN=ARPC2A PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.0e-18
Identity = 42/160 (26.25%), Postives = 94/160 (58.75%), Query Frame = 1 

Query: 11  LKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLLSQGVLLSDGL 70
           L+ +L +  +L+K  E+++   E+  V+YH+Q ++ +P  + LS++ P      +  DGL
Sbjct: 12  LQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGL 71

Query: 71  SPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDIAAVQAVIISS 130
               +E +K  +    +I++P ++G+ LTL+++ +K+      E+++T +A+++ V++ +
Sbjct: 72  PLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKV---RPDEELLTKLASIREVVMGA 131

Query: 131 QLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQASQ 171
            LK + +++ S T+   + R + +++ P E FF+V QA +
Sbjct: 132 PLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADK 168

[Close]
BLAST of MELO3C006386 vs. TrEMBL
Match: A0A0A0L4Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134720 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.9e-84
Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQG LLSDGLSPYTVEMVKQI SHA+EIIEPAKEGYELTLRI+SAKILHGEESEKIITDI
Sbjct: 61  SQGDLLSDGLSPYTVEMVKQICSHAIEIIEPAKEGYELTLRINSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           AAVQAVIISS+LKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ
Sbjct: 121 AAVQAVIISSRLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 167

[Close]
BLAST of MELO3C006386 vs. TrEMBL
Match: B9HSS9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07750g PE=4 SV=2)

HSP 1 Score: 244.6 bits (623), Expect = 9.3e-62
Identity = 117/167 (70.06%), Postives = 146/167 (87.43%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACF R SPAL+EILLKLY  EKP EI+HHL+E+GSV+YH+QSS  DPQH YLSI+TPLL
Sbjct: 1   MACFDRVSPALREILLKLYRAEKPVEIDHHLYEFGSVEYHVQSSAADPQHNYLSISTPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQG LLS GLS YT++MVKQ+ S AVEI+EPAKEGY+LTL+++ AK+  G++SEK+IT I
Sbjct: 61  SQGALLSYGLSSYTMQMVKQVCSDAVEIVEPAKEGYQLTLKLNFAKVPIGKDSEKVITQI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           ++VQAVI+SSQLKE+LRNVNS    QG+++PIKLVYHPREPF+V++Q
Sbjct: 121 SSVQAVILSSQLKEMLRNVNSQDTSQGMNKPIKLVYHPREPFYVIRQ 167

[Close]
BLAST of MELO3C006386 vs. TrEMBL
Match: A5BZC6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000730 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.3e-59
Identity = 115/167 (68.86%), Postives = 140/167 (83.83%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACF+RASPALKEILLKLY  EKP EI+HHL+E+GSV+YH+QSS  DP   YLSIATPLL
Sbjct: 1   MACFERASPALKEILLKLYRTEKPMEIDHHLYEFGSVEYHVQSSASDPHDTYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQGVL S GLS YT+EM+K I S  +EI+EPA+EGY+LTLR+D AKI  G++  K+I  I
Sbjct: 61  SQGVLPSHGLSHYTIEMIKGICSDVLEIVEPAREGYQLTLRLDLAKIPQGKDGAKVIAQI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           ++VQAVI+SSQLKE+L+NVNS    QG+ +PIKLVYHPREPFFV++Q
Sbjct: 121 SSVQAVILSSQLKEMLQNVNSQDTSQGMYKPIKLVYHPREPFFVIRQ 167

[Close]
BLAST of MELO3C006386 vs. TrEMBL
Match: D7SZM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01740 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.3e-59
Identity = 115/167 (68.86%), Postives = 140/167 (83.83%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACF+RASPALKEILLKLY  EKP EI+HHL+E+GSV+YH+QSS  DP   YLSIATPLL
Sbjct: 1   MACFERASPALKEILLKLYRTEKPMEIDHHLYEFGSVEYHVQSSASDPHDTYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQGVL S GLS YT+EM+K I S  +EI+EPA+EGY+LTLR+D AKI  G++  K+I  I
Sbjct: 61  SQGVLPSHGLSHYTIEMIKGICSDVLEIVEPAREGYQLTLRLDLAKIPQGKDGAKVIAQI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           ++VQAVI+SSQLKE+L+NVNS    QG+ +PIKLVYHPREPFFV++Q
Sbjct: 121 SSVQAVILSSQLKEMLQNVNSQDTSQGMYKPIKLVYHPREPFFVIRQ 167

[Close]
BLAST of MELO3C006386 vs. TrEMBL
Match: B9HKT7_POPTR (Actin-related protein 2/3 complex 34kDa subunit OS=Populus trichocarpa GN=POPTR_0008s17070g PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.3e-59
Identity = 113/167 (67.66%), Postives = 142/167 (85.03%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACF+R SPALKEILLKLY  EKP EI+HHL+E+G V+YH+QSS  DPQ+ YLS++TPLL
Sbjct: 1   MACFERVSPALKEILLKLYHAEKPVEIDHHLYEFGCVEYHVQSSAADPQNNYLSLSTPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQG LLS GLS YT +MVKQ+ S AVEI+EPAKEGY+LTL+++ AKI  G++  K+IT I
Sbjct: 61  SQGALLSCGLSSYTTQMVKQVCSDAVEIVEPAKEGYQLTLKLNLAKIPRGKDPYKVITQI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           ++VQAVI+ SQLKE+LRNVNS    QG+++PIKLVYHPREPF+V++Q
Sbjct: 121 SSVQAVILCSQLKEMLRNVNSQDTSQGMNKPIKLVYHPREPFYVIRQ 167

[Close]
BLAST of MELO3C006386 vs. TAIR10
Match: AT2G33385.2 (AT2G33385.2 actin-related protein C2B)

HSP 1 Score: 161.0 bits (406), Expect = 6.9e-40
Identity = 86/185 (46.49%), Postives = 124/185 (67.03%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MA  +RASP LKE LLK+Y  EKP E++ H HE+GS++YHI+ SV DP  +++S +T L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           +QG +    +S YT E++K I    ++I++P + G++LTL ++   I  G+E+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISR-----PIKLVYHPREPFFVVKQASQNYFV- 180
           + +QA+I+SSQLKE+LR++N    FQ  SR     PI++VYHP EPF+V KQ  +   V 
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

[Close]
BLAST of MELO3C006386 vs. TAIR10
Match: AT1G30825.1 (AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc)

HSP 1 Score: 92.0 bits (227), Expect = 3.9e-19
Identity = 42/160 (26.25%), Postives = 94/160 (58.75%), Query Frame = 1 

Query: 11  LKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLLSQGVLLSDGL 70
           L+ +L +  +L+K  E+++   E+  V+YH+Q ++ +P  + LS++ P      +  DGL
Sbjct: 12  LQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGL 71

Query: 71  SPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDIAAVQAVIISS 130
               +E +K  +    +I++P ++G+ LTL+++ +K+      E+++T +A+++ V++ +
Sbjct: 72  PLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKV---RPDEELLTKLASIREVVMGA 131

Query: 131 QLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQASQ 171
            LK + +++ S T+   + R + +++ P E FF+V QA +
Sbjct: 132 PLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADK 168

[Close]
BLAST of MELO3C006386 vs. NCBI nr
Match: gi|659076049|ref|XP_008438473.1| (PREDICTED: actin-related protein 2/3 complex subunit 2B [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 7.1e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI
Sbjct: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ
Sbjct: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 167

[Close]
BLAST of MELO3C006386 vs. NCBI nr
Match: gi|778678103|ref|XP_004134045.2| (PREDICTED: actin-related protein 2/3 complex subunit 2B [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 5.6e-84
Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQG LLSDGLSPYTVEMVKQI SHA+EIIEPAKEGYELTLRI+SAKILHGEESEKIITDI
Sbjct: 61  SQGDLLSDGLSPYTVEMVKQICSHAIEIIEPAKEGYELTLRINSAKILHGEESEKIITDI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           AAVQAVIISS+LKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ
Sbjct: 121 AAVQAVIISSRLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 167

[Close]
BLAST of MELO3C006386 vs. NCBI nr
Match: gi|743896310|ref|XP_011041425.1| (PREDICTED: actin-related protein 2/3 complex subunit 2B-like isoform X1 [Populus euphratica])

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-61
Identity = 117/167 (70.06%), Postives = 146/167 (87.43%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACF R SPAL+EILLKLY  EKP EI+HHL+E+GSV+YH+QSS  DPQH YLSI+TPLL
Sbjct: 1   MACFDRVSPALREILLKLYRAEKPVEIDHHLYEFGSVEYHVQSSAADPQHNYLSISTPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQG LLS GLS YT++MVKQ+ S AVEI+EPAKEGY+LTL+++ AK+  G++SEK+IT I
Sbjct: 61  SQGALLSYGLSSYTMQMVKQVCSDAVEIVEPAKEGYQLTLKLNFAKVPIGKDSEKVITQI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           ++VQAVI+SSQLKE+LRNVNS    QG+++PIKLVYHPREPF+V++Q
Sbjct: 121 SSVQAVILSSQLKEMLRNVNSQDTSQGMNKPIKLVYHPREPFYVIRQ 167

[Close]
BLAST of MELO3C006386 vs. NCBI nr
Match: gi|566189654|ref|XP_002314500.2| (hypothetical protein POPTR_0010s07750g [Populus trichocarpa])

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-61
Identity = 117/167 (70.06%), Postives = 146/167 (87.43%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACF R SPAL+EILLKLY  EKP EI+HHL+E+GSV+YH+QSS  DPQH YLSI+TPLL
Sbjct: 1   MACFDRVSPALREILLKLYRAEKPVEIDHHLYEFGSVEYHVQSSAADPQHNYLSISTPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQG LLS GLS YT++MVKQ+ S AVEI+EPAKEGY+LTL+++ AK+  G++SEK+IT I
Sbjct: 61  SQGALLSYGLSSYTMQMVKQVCSDAVEIVEPAKEGYQLTLKLNFAKVPIGKDSEKVITQI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           ++VQAVI+SSQLKE+LRNVNS    QG+++PIKLVYHPREPF+V++Q
Sbjct: 121 SSVQAVILSSQLKEMLRNVNSQDTSQGMNKPIKLVYHPREPFYVIRQ 167

[Close]
BLAST of MELO3C006386 vs. NCBI nr
Match: gi|1009140650|ref|XP_015887768.1| (PREDICTED: actin-related protein 2/3 complex subunit 2B [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 2.5e-60
Identity = 116/167 (69.46%), Postives = 147/167 (88.02%), Query Frame = 1 

Query: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60
           MACFQRASPALKEILLKLY+ EK  EI+HHL+E+GSV+YHIQSS  DPQ+ YLSI+TPLL
Sbjct: 1   MACFQRASPALKEILLKLYNAEKTMEIDHHLYEFGSVEYHIQSSPSDPQYAYLSISTPLL 60

Query: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120
           SQGV+LS GLS +T++MVK+I S  VEIIEP KEGY+LTLR+D AKIL+ ++SEK+I++I
Sbjct: 61  SQGVMLSHGLSHFTIQMVKEICSDVVEIIEPTKEGYQLTLRLDFAKILNSKDSEKVISEI 120

Query: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQ 168
           +A+QAVI+S+QLKE+L +VN+   +QG  +PIKLVYHPREPFFV++Q
Sbjct: 121 SALQAVILSTQLKEMLLSVNTQDTYQGTYKPIKLVYHPREPFFVIRQ 167

The following BLAST results are available for this feature:
BLAST of MELO3C006386 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARC2B_ARATH1.2e-3846.49Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana GN=ARPC2B P... [more]
ARC2A_ARATH7.0e-1826.25Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana GN=ARPC2A P... [more]
BLAST of MELO3C006386 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4Y8_CUCSA3.9e-8497.01Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134720 PE=4 SV=1[more]
B9HSS9_POPTR9.3e-6270.06Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07750g PE=4 SV=2[more]
A5BZC6_VITVI3.3e-5968.86Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000730 PE=4 SV=1[more]
D7SZM6_VITVI3.3e-5968.86Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01740 PE=4 SV=... [more]
B9HKT7_POPTR4.3e-5967.66Actin-related protein 2/3 complex 34kDa subunit OS=Populus trichocarpa GN=POPTR_... [more]
BLAST of MELO3C006386 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33385.26.9e-4046.49 actin-related protein C2B[more]
AT1G30825.13.9e-1926.25 Arp2/3 complex, 34 kD subunit p34-Arc[more]
BLAST of MELO3C006386 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076049|ref|XP_008438473.1|7.1e-87100.00PREDICTED: actin-related protein 2/3 complex subunit 2B [Cucumis melo][more]
gi|778678103|ref|XP_004134045.2|5.6e-8497.01PREDICTED: actin-related protein 2/3 complex subunit 2B [Cucumis sativus][more]
gi|743896310|ref|XP_011041425.1|1.3e-6170.06PREDICTED: actin-related protein 2/3 complex subunit 2B-like isoform X1 [Populus... [more]
gi|566189654|ref|XP_002314500.2|1.3e-6170.06hypothetical protein POPTR_0010s07750g [Populus trichocarpa][more]
gi|1009140650|ref|XP_015887768.1|2.5e-6069.46PREDICTED: actin-related protein 2/3 complex subunit 2B [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007188ARPC2
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006386T1MELO3C006386T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007188Actin-related protein 2/3 complex subunit 2PANTHERPTHR12058ARP2/3 COMPLEX 34 KDA SUBUNITcoord: 2..170
score: 3.7
NoneNo IPR availableGENE3DG3DSA:3.30.1460.20coord: 1..137
score: 2.2
NoneNo IPR availablePANTHERPTHR12058:SF1ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2Bcoord: 2..170
score: 3.7
NoneNo IPR availableunknownSSF69645Arp2/3 complex subunitscoord: 1..126
score: 5.49

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006386Cla97C05G084740Watermelon (97103) v2mewmbB434
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006386Wax gourdmewgoB514
MELO3C006386Wax gourdmewgoB534
MELO3C006386Wax gourdmewgoB552
MELO3C006386Melon (DHL92) v3.5.1memeB140
MELO3C006386Melon (DHL92) v3.5.1memeB147
MELO3C006386Cucumber (Gy14) v1cgymeB439
MELO3C006386Cucumber (Gy14) v1cgymeB625
MELO3C006386Cucurbita maxima (Rimu)cmameB242
MELO3C006386Cucurbita maxima (Rimu)cmameB580
MELO3C006386Cucurbita maxima (Rimu)cmameB763
MELO3C006386Cucurbita maxima (Rimu)cmameB850
MELO3C006386Cucurbita moschata (Rifu)cmomeB230
MELO3C006386Cucurbita moschata (Rifu)cmomeB568
MELO3C006386Cucurbita moschata (Rifu)cmomeB832
MELO3C006386Cucurbita moschata (Rifu)cmomeB755
MELO3C006386Wild cucumber (PI 183967)cpimeB144
MELO3C006386Wild cucumber (PI 183967)cpimeB230
MELO3C006386Wild cucumber (PI 183967)cpimeB248
MELO3C006386Cucumber (Chinese Long) v2cumeB145
MELO3C006386Cucumber (Chinese Long) v2cumeB236
MELO3C006386Cucumber (Chinese Long) v2cumeB253
MELO3C006386Watermelon (Charleston Gray)mewcgB427
MELO3C006386Watermelon (Charleston Gray)mewcgB441
MELO3C006386Watermelon (Charleston Gray)mewcgB445
MELO3C006386Watermelon (97103) v1mewmB486
MELO3C006386Watermelon (97103) v1mewmB459
MELO3C006386Watermelon (97103) v1mewmB461
MELO3C006386Cucurbita pepo (Zucchini)cpemeB316
MELO3C006386Cucurbita pepo (Zucchini)cpemeB585
MELO3C006386Cucurbita pepo (Zucchini)cpemeB702
MELO3C006386Cucurbita pepo (Zucchini)cpemeB813
MELO3C006386Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006386Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006386Bottle gourd (USVL1VR-Ls)lsimeB382
MELO3C006386Cucumber (Gy14) v2cgybmeB126
MELO3C006386Cucumber (Gy14) v2cgybmeB200
MELO3C006386Cucumber (Gy14) v2cgybmeB216
MELO3C006386Silver-seed gourdcarmeB0236
MELO3C006386Silver-seed gourdcarmeB0240
MELO3C006386Silver-seed gourdcarmeB0780
MELO3C006386Silver-seed gourdcarmeB0941
MELO3C006386Silver-seed gourdcarmeB1050
MELO3C006386Cucumber (Chinese Long) v3cucmeB147
MELO3C006386Cucumber (Chinese Long) v3cucmeB236
MELO3C006386Cucumber (Chinese Long) v3cucmeB253
MELO3C006386Watermelon (97103) v2mewmbB448
MELO3C006386Watermelon (97103) v2mewmbB451