MELO3C006374 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006374
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA-binding family protein
Locationchr6 : 2890719 .. 2893476 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCTGCCGCAGCCGCCACCGGAGCCTCCTTCTTCACCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGTTCTCTGATTCTCTCCTCGCAACTCCATCCACCCAAGTTCTGCCCATATTGTCCCGCTCTCTGACCATTGAATCGCCTCCGCTTAGAGCTTCCTCGGAGAGGTGGCGGCCGGTTCTGATCATCTCGGCCGCCGTTGTACAAGGAGAGACGGCTGTGATGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGCGGTGGAAGGCGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCTTACAGTGTTGATAGTTCACAGCTCGCCGCTATCGTTCAGGATCATGGTGTCGCTGAGCTCATTGAGGTACATTGCCTGCAAATGTCACTGAGTAGTTTCTATATTGAATTCTAG

mRNA sequence

ATGGCCGCTGCCGCAGCCGCCACCGGAGCCTCCTTCTTCACCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGTTCTCTGATTCTCTCCTCGCAACTCCATCCACCCAAGTTCTGCCCATATTGTCCCGCTCTCTGACCATTGAATCGCCTCCGCTTAGAGCTTCCTCGGAGAGGTGGCGGCCGGTTCTGATCATCTCGGCCGCCGTTGTACAAGGAGAGACGGCTGTGATGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGCGGTGGAAGGCGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCTTACAGTGTTGATAGTTCACAGCTCGCCGCTATCGTTCAGGATCATGGTGTCGCTGAGCTCATTGAGGTACATTGCCTGCAAATGTCACTGAGTAGTTTCTATATTGAATTCTAG

Coding sequence (CDS)

ATGGCCGCTGCCGCAGCCGCCACCGGAGCCTCCTTCTTCACCACTCCCTTAAGGGGTTCACGGTCCAAGCACTGGTTCTCTGATTCTCTCCTCGCAACTCCATCCACCCAAGTTCTGCCCATATTGTCCCGCTCTCTGACCATTGAATCGCCTCCGCTTAGAGCTTCCTCGGAGAGGTGGCGGCCGGTTCTGATCATCTCGGCCGCCGTTGTACAAGGAGAGACGGCTGTGATGGTTGGAGTTGAAGAGGGTGTGGAGGAGGAGACGGCGGTGGAAGGCGGTTCTCCAGTGGAGTCTGGGAGTACTAAGCTGTACTTTGGGAATCTGCCTTACAGTGTTGATAGTTCACAGCTCGCCGCTATCGTTCAGGATCATGGTGTCGCTGAGCTCATTGAGGTACATTGCCTGCAAATGTCACTGAGTAGTTTCTATATTGAATTCTAG

Protein sequence

MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVHCLQMSLSSFYIEF*
Homology
[Close]
BLAST of MELO3C006374 vs. Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.4e-39
Identity = 94/212 (44.34%), Postives = 130/212 (61.32%), Query Frame = 1 

Query: 69  AVVQGET----AVMVGVEEGVEEETAVEGGSPVESG--STKLYFGNLPYSVDSSQLAAIV 128
           AV++GE+    AV  G E  V +E  VEGG          KL+ GNLPY VDS +LA I 
Sbjct: 16  AVLEGESDPEGAVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIF 75

Query: 129 QDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPK 188
              GV E+ EV+Y+R T +SRGF FVTMS++E+  K +E L+G    GR L VN +  P+
Sbjct: 76  DAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKA-APR 135

Query: 189 PKEPLYPETEY----KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGF 248
                 P  ++    +++VGNL W V +  L Q F E+G VV ARV+ + ETG+SRG+GF
Sbjct: 136 GSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGF 195

Query: 249 VSYSTKSEMETALEALNEVELEGRVIRVSLAE 271
           V+ S++SE+  A+ AL+   L+GR +RV++AE
Sbjct: 196 VTMSSESEVNDAIAALDGQTLDGRAVRVNVAE 226

[Close]
BLAST of MELO3C006374 vs. Swiss-Prot
Match: CP31B_ARATH (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 100/261 (38.31%), Postives = 146/261 (55.94%), Query Frame = 1 

Query: 20  SRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSE--RWRPVLIISAAVVQGETAV 79
           S   H F+ SL + P    L + S++L   SP +   S+   W       A   +GE   
Sbjct: 34  SSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSNW-------AEEEEGEDGS 93

Query: 80  MVG----VEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEV 139
           + G    V+E  E E  V  G P      KL+ GNLPY VDS  LA + +  G  E+ EV
Sbjct: 94  IGGTSVTVDESFESEDGV--GFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEV 153

Query: 140 LYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYP 199
           +Y+R+T +SRGF FVTMS++E+  K +E  +     GR L VN +     +P+ ++P   
Sbjct: 154 IYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE-RQPRVY 213

Query: 200 ETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMET 259
           +  ++++VGNL W V S  L + F E+G VV ARV+ + ETG+SRG+GFV  S ++E+  
Sbjct: 214 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 273

Query: 260 ALEALNEVELEGRVIRVSLAE 271
           A+ AL+   LEGR I+V++AE
Sbjct: 274 AIAALDGQNLEGRAIKVNVAE 284

[Close]
BLAST of MELO3C006374 vs. Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.3e-38
Identity = 85/211 (40.28%), Postives = 129/211 (61.14%), Query Frame = 1 

Query: 74  ETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEV 133
           E A+    EE +EE+        VE G  +LY GNLP+S+ SSQL+ I  + G    +E+
Sbjct: 88  EVALSAEEEEEIEEKEERVESESVEGG--RLYVGNLPFSMTSSQLSEIFAEAGTVANVEI 147

Query: 134 LYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKE-------- 193
           +YDR T +SRGFAFVTM S+E+  + I   DG+   GR ++VNF + P+  E        
Sbjct: 148 VYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKI 207

Query: 194 ----PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSY 253
                 + ++ +KL+V NLSW++TS+ L  AF +    + A+VIY+  +G+SRG+GF+++
Sbjct: 208 RSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITF 267

Query: 254 STKSEMETALEALNEVELEGRVIRVSLAEGK 273
           S+   M +AL+ +NEVELEGR +R+++A  K
Sbjct: 268 SSAEAMNSALDTMNEVELEGRPLRLNVAGQK 296

[Close]
BLAST of MELO3C006374 vs. Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-37
Identity = 83/204 (40.69%), Postives = 130/204 (63.73%), Query Frame = 1 

Query: 78  MVGVEEGVEEETAVEGGSPVES---GSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVL 137
           ++ V   V EET+    +   S   G+ +LY GN+P ++++ +L  IV++HG  E+ EV+
Sbjct: 57  LLKVRAVVTEETSSSSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVM 116

Query: 138 YDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKP---------KPKE 197
           YD+ +G+SR F FVTM ++ED N VIE L+ T   GR ++VN ++KP         + ++
Sbjct: 117 YDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAED 176

Query: 198 PLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKS 257
             + E+ YK+++GNL+ +VT+E+L   F E G V+GA+V     T KS G+GFVS+S++ 
Sbjct: 177 SQFVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEE 236

Query: 258 EMETALEALNEVELEGRVIRVSLA 270
           E+E A++ALN   LEG+ IRV+ A
Sbjct: 237 EVEAAIQALNNSVLEGQKIRVNKA 260

[Close]
BLAST of MELO3C006374 vs. Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.7e-36
Identity = 95/245 (38.78%), Postives = 138/245 (56.33%), Query Frame = 1 

Query: 35  STQVLPILSRSLTIESPPLRASSERWRPV-LIISAAVVQGETAVMVGVEEGVEEETAV-E 94
           STQ+ PI   SL+   P L + ++R       +S       T V+   E+G +  + V E
Sbjct: 27  STQLKPI---SLSSSLPTLLSLNKRTTQFPTFVSVLSEDDNTLVLDDQEQGGDFPSFVGE 86

Query: 95  GGSPVE----SGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFV 154
            G   E    S   KL+ GNLPY +DS  LA + Q  GV E+ EV+Y+R T +SRGF FV
Sbjct: 87  AGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFV 146

Query: 155 TMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPET---EYKLFVGNLSWSVT 214
           TMS++E+ +K +E        GR+L VN +     +    P T    Y+++VGN+ W + 
Sbjct: 147 TMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDID 206

Query: 215 SEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIR 271
              L Q F E+G VV ARV+++ E+G+SRG+GFV+ S+++EM  A+  L+   L+GR IR
Sbjct: 207 DARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIR 266

[Close]
BLAST of MELO3C006374 vs. TrEMBL
Match: A0A0A0L496_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134590 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 6.9e-141
Identity = 259/276 (93.84%), Postives = 267/276 (96.74%), Query Frame = 1 

Query: 1   MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERW 60
           MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+W
Sbjct: 1   MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKW 60

Query: 61  RPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAA 120
           RPV+IISAAVVQGETAV VGVEEGVEEET VEGGSPVESGSTKLYFGNLPYSVDSSQLAA
Sbjct: 61  RPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAA 120

Query: 121 IVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDK 180
           IVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDK
Sbjct: 121 IVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDK 180

Query: 181 PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVS 240
           PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVS
Sbjct: 181 PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVS 240

Query: 241 YSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 277
           YSTKSEMETALE +NE+ELEGRVIRVSLAEGKQA G
Sbjct: 241 YSTKSEMETALETINELELEGRVIRVSLAEGKQAHG 276

[Close]
BLAST of MELO3C006374 vs. TrEMBL
Match: B9SQT1_RICCO (Ribonucleoprotein, chloroplast, putative OS=Ricinus communis GN=RCOM_1217370 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-88
Identity = 181/287 (63.07%), Postives = 220/287 (76.66%), Query Frame = 1 

Query: 1   MAAAAAATGASFFTTP---LRGSRSKHWFSDSLLATPSTQVLPILS---RSLTIESPPLR 60
           MAA AAA  +S F+     L+ + SKH  SDSLL  PS   + + S   RS  IE  PL 
Sbjct: 1   MAATAAAAISSSFSPSIHTLKCTNSKHLPSDSLLRLPSAHRVALASIYHRSYAIE--PLS 60

Query: 61  ASSERWRPVL-IISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESG------STKLYFG 120
             +  WR V  ++SAAV Q E AV   VEE  +++ A EG +  E+       +TKLYFG
Sbjct: 61  QVAVSWRSVARLVSAAVAQEEAAVTAPVEEDEQQQVAEEGEAEPEAEPEAAPINTKLYFG 120

Query: 121 NLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTA 180
           NLPY+VDS+QLA I+QD+G  EL+EVLYDR+TG+SRGFAFVTMS++EDCN VIENLDG+ 
Sbjct: 121 NLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENLDGSQ 180

Query: 181 YMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYN 240
           +MGRILRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE L +AFQEYGN+VGARV+Y+
Sbjct: 181 FMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYD 240

Query: 241 GETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQA 275
           GETG+SRGYGFV Y+T+SEME AL +LN VELEGR +RVSLA+GK++
Sbjct: 241 GETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285

[Close]
BLAST of MELO3C006374 vs. TrEMBL
Match: A0A067KAS6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12870 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.0e-88
Identity = 188/304 (61.84%), Postives = 220/304 (72.37%), Query Frame = 1 

Query: 2   AAAAAATGASFFTTPLRG---SRSKHWFSDSLLATPSTQVLPI----LSRSLTIESPPLR 61
           AAAAAAT AS F+  +     S SKH+ SDSLL  PST  L I    +SRS  IE P   
Sbjct: 5   AAAAAATVASSFSPSIHNRKCSNSKHFLSDSLLKLPSTTRLAITASSISRSYAIE-PISS 64

Query: 62  ASSERWRPVLIISAAVVQGETAVMVGVEE-------GVEEETAVEGGSPVESG------- 121
             +  WR V  +SAAV Q E A    VEE        VEEE A    +  E         
Sbjct: 65  LVAVSWR-VPRVSAAVAQEEAAATAAVEEEEAAATAAVEEEKAAPTAAVEEEAQQQQVAG 124

Query: 122 ----------STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTM 181
                     +TKLYFGNLPY+VDS+QLA I+Q++G  EL+EVLYDR+TG+SRGFAFVTM
Sbjct: 125 EGEGEAEIPLNTKLYFGNLPYNVDSAQLAGIIQEYGAPELVEVLYDRDTGRSRGFAFVTM 184

Query: 182 SSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILT 241
           SS+EDCN+VIENLDG+ YMGRILRVNF+DKPKPKEPLYPETE+KLFVGNLSWSVTSE LT
Sbjct: 185 SSVEDCNRVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLT 244

Query: 242 QAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAE 275
           +AFQEYG VVGARV+Y+GETG+SRGYGFV YST+SEME A+E+LN VELEGR +RVSLA+
Sbjct: 245 RAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTRSEMENAIESLNGVELEGRAMRVSLAQ 304

[Close]
BLAST of MELO3C006374 vs. TrEMBL
Match: D7SZP1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01930 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.4e-87
Identity = 183/284 (64.44%), Postives = 216/284 (76.06%), Query Frame = 1 

Query: 2   AAAAAATGASFFTT--PLRGSRSKHWFSDSLLATPSTQV--LPILSRSLTIESPPLRASS 61
           A AAAA G+SF TT   L+ SRSKH  SD+LL   ST +  +P +S S  I+ P     S
Sbjct: 3   ATAAAAIGSSFSTTMHTLKLSRSKHCPSDALLRIISTPIFKVPSISHSHVIDPPLSLPIS 62

Query: 62  ERWRPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPV--ESGS-----TKLYFGNLP 121
            +WR   I SAAV Q E A    VEE  E++   E G  V  E G+     TKLYFGNLP
Sbjct: 63  HKWRAPRI-SAAVAQEEAAATAPVEE--EQQQGQEEGEQVLREEGAESPVNTKLYFGNLP 122

Query: 122 YSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMG 181
           YS DS+QLA I+Q++G  EL+EVLY+R+TG+SRGFAFVTMSS+EDCN VIENLDG+ Y G
Sbjct: 123 YSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGG 182

Query: 182 RILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGET 241
           R LRVNFSDKPKPK PLYPETEYKLFVGNLSWSVTSE L Q FQEYGNV+GARV+Y+GET
Sbjct: 183 RTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGET 242

Query: 242 GKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQA 275
           G+SRGYGFV YSTK+EM+TALE+LN VELEGR IR+SLA+G+++
Sbjct: 243 GRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283

[Close]
BLAST of MELO3C006374 vs. TrEMBL
Match: A0A059AUH8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00128 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.7e-84
Identity = 171/253 (67.59%), Postives = 197/253 (77.87%), Query Frame = 1 

Query: 31  LATPSTQVLPILSRSLTIESPPLRASSERWRPVLIISAAVVQGETAVMVGVE-------E 90
           L +PS+  LP L  +L++   PLR      R  L ISAA+ Q E A    VE       E
Sbjct: 39  LLSPSSSSLPHLGEALSVRITPLRR-----RAGLRISAALAQEEAAAPAAVEVEKEEEKE 98

Query: 91  GVEEETAVEGGSPVESG---STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTG 150
           G +EE   EG      G   +TKLYFGNLPY+VDS+QLA I+QD+G  EL+EVLYDR+TG
Sbjct: 99  GEQEEKEGEGEGEGADGVTVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRDTG 158

Query: 151 KSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNL 210
           +SRGFAFVTMSSIEDCN VIENL G+ YMGR LRVNFSDKPKPKEPLYPETE+KLFVGNL
Sbjct: 159 RSRGFAFVTMSSIEDCNAVIENLAGSEYMGRTLRVNFSDKPKPKEPLYPETEHKLFVGNL 218

Query: 211 SWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELE 270
           SWSVTSE L +AFQEYGNVVGARV+Y+GETG+SRGYGFVSYSTK+EMETA+E+LN VELE
Sbjct: 219 SWSVTSESLAKAFQEYGNVVGARVLYDGETGRSRGYGFVSYSTKAEMETAIESLNGVELE 278

Query: 271 GRVIRVSLAEGKQ 274
           GR +RVSLAEGK+
Sbjct: 279 GRAMRVSLAEGKR 286

[Close]
BLAST of MELO3C006374 vs. TAIR10
Match: AT1G60000.1 (AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 137/226 (60.62%), Postives = 176/226 (77.88%), Query Frame = 1 

Query: 53  LRASSERWRPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGS----PVESGSTKLYFGN 112
           LR +    +P+LI S +  +    +   +   +EEE   +G S    P  + +TKLYFGN
Sbjct: 32  LRFNFSTPKPLLISSRSCSRRFRVLSETITVKLEEEEKDDGASAVLDPPAAVNTKLYFGN 91

Query: 113 LPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAY 172
           LPY+VDS+ LA I+QD    EL+EVLY+R+TG+SRGFAFVTMS++EDCN +I+NLDGT Y
Sbjct: 92  LPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEY 151

Query: 173 MGRILRVNFSDKPKP-KEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYN 232
           +GR L+VNF+DKPKP KEPLYPETE+KLFVGNLSW+VTSE L  AF+E G+VVGARV+++
Sbjct: 152 LGRALKVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFD 211

Query: 233 GETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQ 274
           G+TG+SRGYGFV YS+K+EMETALE+L+  ELEGR IRV+LA+GK+
Sbjct: 212 GDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQGKK 257

[Close]
BLAST of MELO3C006374 vs. TAIR10
Match: AT5G50250.1 (AT5G50250.1 chloroplast RNA-binding protein 31B)

HSP 1 Score: 161.8 bits (408), Expect = 6.2e-40
Identity = 100/261 (38.31%), Postives = 146/261 (55.94%), Query Frame = 1 

Query: 20  SRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSE--RWRPVLIISAAVVQGETAV 79
           S   H F+ SL + P    L + S++L   SP +   S+   W       A   +GE   
Sbjct: 34  SSESHRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSNW-------AEEEEGEDGS 93

Query: 80  MVG----VEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEV 139
           + G    V+E  E E  V  G P      KL+ GNLPY VDS  LA + +  G  E+ EV
Sbjct: 94  IGGTSVTVDESFESEDGV--GFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEV 153

Query: 140 LYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYP 199
           +Y+R+T +SRGF FVTMS++E+  K +E  +     GR L VN +     +P+ ++P   
Sbjct: 154 IYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPE-RQPRVY 213

Query: 200 ETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMET 259
           +  ++++VGNL W V S  L + F E+G VV ARV+ + ETG+SRG+GFV  S ++E+  
Sbjct: 214 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 273

Query: 260 ALEALNEVELEGRVIRVSLAE 271
           A+ AL+   LEGR I+V++AE
Sbjct: 274 AIAALDGQNLEGRAIKVNVAE 284

[Close]
BLAST of MELO3C006374 vs. TAIR10
Match: AT2G37220.1 (AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 1 

Query: 77  VMVGVEEGVEEETAVEGGSPVE---SGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEV 136
           V +  E  VEE+   +   P E   S   KL+ GNLP++VDS+QLA + +  G  E++EV
Sbjct: 63  VAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEV 122

Query: 137 LYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLY---PE 196
           +YD+ TG+SRGF FVTMSS+ +     +  +G    GR LRVN    P  +E  +   P 
Sbjct: 123 IYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPR 182

Query: 197 TEY-------------------KLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETG 256
           + +                   +++VGNLSW V    L   F E G VV ARVIY+ ++G
Sbjct: 183 SSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSG 242

Query: 257 KSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGK 273
           +S+G+GFV+Y +  E++ A+++L+  +L+GR IRVS AE +
Sbjct: 243 RSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEAR 283

[Close]
BLAST of MELO3C006374 vs. TAIR10
Match: AT4G24770.1 (AT4G24770.1 31-kDa RNA binding protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 1 

Query: 81  VEEGVEEETAVEGGS-------PVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEV 140
           V EG E E  V  G+       P  S   KL+ GNL Y V+S  LA + +  G  E+ EV
Sbjct: 122 VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEV 181

Query: 141 LYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFS----DKPKPKEPLYP 200
           +Y+R T +SRGF FVTMSS+++    +E  +     GR+L VN +     +P+    +Y 
Sbjct: 182 IYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVY- 241

Query: 201 ETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMET 260
           E  ++++VGNL W V +  L Q F E+G VV ARV+Y+ ETG+SRG+GFV+ S   E+  
Sbjct: 242 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 301

Query: 261 ALEALNEVELEGRVIRVSLAE 271
           A+ AL+   LEGR IRV++AE
Sbjct: 302 AISALDGQNLEGRAIRVNVAE 321


HSP 2 Score: 82.0 bits (201), Expect = 6.2e-16
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 1 

Query: 65  IISAAVVQGETAV-----------MVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSV 124
           +  ++V + ETAV           ++ V +     +  E    V   + ++Y GNLP+ V
Sbjct: 196 VTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDV 255

Query: 125 DSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRIL 184
           D+ +L  +  +HG      V+YDR TG+SRGF FVTMS +++ N+ I  LDG    GR +
Sbjct: 256 DNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI 315

[Close]
BLAST of MELO3C006374 vs. TAIR10
Match: AT3G52380.1 (AT3G52380.1 chloroplast RNA-binding protein 33)

HSP 1 Score: 149.1 bits (375), Expect = 4.1e-36
Identity = 77/204 (37.75%), Postives = 123/204 (60.29%), Query Frame = 1 

Query: 82  EEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGK 141
           EE VEEE      S  E    +LY GNLPY++ SS+L+ I  + G    ++++YD+ T +
Sbjct: 99  EEEVEEEKQTTQASGEEG---RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDR 158

Query: 142 SRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEP------------LYP 201
           SRGF FVTM SIE+  + ++  + +   GR ++VNF + P+  E              Y 
Sbjct: 159 SRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYV 218

Query: 202 ETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMET 261
           ++ +K++ GNL W++TS+ L  AF +   V+GA+VIY   TG+SRG+GF+S+ +   +++
Sbjct: 219 DSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQS 278

Query: 262 ALEALNEVELEGRVIRVSLAEGKQ 274
           AL  +N VE+EGR +R++LA  ++
Sbjct: 279 ALATMNGVEVEGRALRLNLASERE 299


HSP 2 Score: 58.2 bits (139), Expect = 9.6e-09
Identity = 32/93 (34.41%), Postives = 47/93 (50.54%), Query Frame = 1 

Query: 103 KLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIEN 162
           K+Y GNL +++ S  L     D       +V+Y+RNTG+SRGF F++  S E+    +  
Sbjct: 220 KVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALAT 279

Query: 163 LDGTAYMGRILRVNFS---DKPKPKEPLYPETE 193
           ++G    GR LR+N +   +KP    P   E E
Sbjct: 280 MNGVEVEGRALRLNLASEREKPTVSPPSVEEGE 312

[Close]
BLAST of MELO3C006374 vs. NCBI nr
Match: gi|659076017|ref|XP_008438454.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo])

HSP 1 Score: 538.9 bits (1387), Expect = 5.3e-150
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1 

Query: 1   MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERW 60
           MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERW
Sbjct: 1   MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERW 60

Query: 61  RPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAA 120
           RPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAA
Sbjct: 61  RPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAA 120

Query: 121 IVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDK 180
           IVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDK
Sbjct: 121 IVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDK 180

Query: 181 PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVS 240
           PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVS
Sbjct: 181 PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVS 240

Query: 241 YSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 277
           YSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG
Sbjct: 241 YSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 276

[Close]
BLAST of MELO3C006374 vs. NCBI nr
Match: gi|449432502|ref|XP_004134038.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus])

HSP 1 Score: 508.1 bits (1307), Expect = 1.0e-140
Identity = 259/276 (93.84%), Postives = 267/276 (96.74%), Query Frame = 1 

Query: 1   MAAAAAATGASFFTTPLRGSRSKHWFSDSLLATPSTQVLPILSRSLTIESPPLRASSERW 60
           MAAAAAATGASFF T LRGSRSKHW SDSLLATPSTQVLPILSRSL IESP LRASSE+W
Sbjct: 1   MAAAAAATGASFFATSLRGSRSKHWLSDSLLATPSTQVLPILSRSLAIESPLLRASSEKW 60

Query: 61  RPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESGSTKLYFGNLPYSVDSSQLAA 120
           RPV+IISAAVVQGETAV VGVEEGVEEET VEGGSPVESGSTKLYFGNLPYSVDSSQLAA
Sbjct: 61  RPVMIISAAVVQGETAVTVGVEEGVEEETEVEGGSPVESGSTKLYFGNLPYSVDSSQLAA 120

Query: 121 IVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMGRILRVNFSDK 180
           IVQD+G+AELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDG+AYMGRILRVNFSDK
Sbjct: 121 IVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDK 180

Query: 181 PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGETGKSRGYGFVS 240
           PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIY+GETGKSRGYGFVS
Sbjct: 181 PKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVS 240

Query: 241 YSTKSEMETALEALNEVELEGRVIRVSLAEGKQAQG 277
           YSTKSEMETALE +NE+ELEGRVIRVSLAEGKQA G
Sbjct: 241 YSTKSEMETALETINELELEGRVIRVSLAEGKQAHG 276

[Close]
BLAST of MELO3C006374 vs. NCBI nr
Match: gi|255574887|ref|XP_002528350.1| (PREDICTED: 30 kDa ribonucleoprotein, chloroplastic [Ricinus communis])

HSP 1 Score: 333.6 bits (854), Expect = 3.4e-88
Identity = 181/287 (63.07%), Postives = 220/287 (76.66%), Query Frame = 1 

Query: 1   MAAAAAATGASFFTTP---LRGSRSKHWFSDSLLATPSTQVLPILS---RSLTIESPPLR 60
           MAA AAA  +S F+     L+ + SKH  SDSLL  PS   + + S   RS  IE  PL 
Sbjct: 1   MAATAAAAISSSFSPSIHTLKCTNSKHLPSDSLLRLPSAHRVALASIYHRSYAIE--PLS 60

Query: 61  ASSERWRPVL-IISAAVVQGETAVMVGVEEGVEEETAVEGGSPVESG------STKLYFG 120
             +  WR V  ++SAAV Q E AV   VEE  +++ A EG +  E+       +TKLYFG
Sbjct: 61  QVAVSWRSVARLVSAAVAQEEAAVTAPVEEDEQQQVAEEGEAEPEAEPEAAPINTKLYFG 120

Query: 121 NLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTA 180
           NLPY+VDS+QLA I+QD+G  EL+EVLYDR+TG+SRGFAFVTMS++EDCN VIENLDG+ 
Sbjct: 121 NLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENLDGSQ 180

Query: 181 YMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYN 240
           +MGRILRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE L +AFQEYGN+VGARV+Y+
Sbjct: 181 FMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYD 240

Query: 241 GETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQA 275
           GETG+SRGYGFV Y+T+SEME AL +LN VELEGR +RVSLA+GK++
Sbjct: 241 GETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285

[Close]
BLAST of MELO3C006374 vs. NCBI nr
Match: gi|802633660|ref|XP_012077603.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha curcas])

HSP 1 Score: 332.8 bits (852), Expect = 5.7e-88
Identity = 188/304 (61.84%), Postives = 220/304 (72.37%), Query Frame = 1 

Query: 2   AAAAAATGASFFTTPLRG---SRSKHWFSDSLLATPSTQVLPI----LSRSLTIESPPLR 61
           AAAAAAT AS F+  +     S SKH+ SDSLL  PST  L I    +SRS  IE P   
Sbjct: 5   AAAAAATVASSFSPSIHNRKCSNSKHFLSDSLLKLPSTTRLAITASSISRSYAIE-PISS 64

Query: 62  ASSERWRPVLIISAAVVQGETAVMVGVEE-------GVEEETAVEGGSPVESG------- 121
             +  WR V  +SAAV Q E A    VEE        VEEE A    +  E         
Sbjct: 65  LVAVSWR-VPRVSAAVAQEEAAATAAVEEEEAAATAAVEEEKAAPTAAVEEEAQQQQVAG 124

Query: 122 ----------STKLYFGNLPYSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTM 181
                     +TKLYFGNLPY+VDS+QLA I+Q++G  EL+EVLYDR+TG+SRGFAFVTM
Sbjct: 125 EGEGEAEIPLNTKLYFGNLPYNVDSAQLAGIIQEYGAPELVEVLYDRDTGRSRGFAFVTM 184

Query: 182 SSIEDCNKVIENLDGTAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILT 241
           SS+EDCN+VIENLDG+ YMGRILRVNF+DKPKPKEPLYPETE+KLFVGNLSWSVTSE LT
Sbjct: 185 SSVEDCNRVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLT 244

Query: 242 QAFQEYGNVVGARVIYNGETGKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAE 275
           +AFQEYG VVGARV+Y+GETG+SRGYGFV YST+SEME A+E+LN VELEGR +RVSLA+
Sbjct: 245 RAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTRSEMENAIESLNGVELEGRAMRVSLAQ 304

[Close]
BLAST of MELO3C006374 vs. NCBI nr
Match: gi|731389898|ref|XP_010650156.1| (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera])

HSP 1 Score: 329.7 bits (844), Expect = 4.9e-87
Identity = 183/284 (64.44%), Postives = 216/284 (76.06%), Query Frame = 1 

Query: 2   AAAAAATGASFFTT--PLRGSRSKHWFSDSLLATPSTQV--LPILSRSLTIESPPLRASS 61
           A AAAA G+SF TT   L+ SRSKH  SD+LL   ST +  +P +S S  I+ P     S
Sbjct: 3   ATAAAAIGSSFSTTMHTLKLSRSKHCPSDALLRIISTPIFKVPSISHSHVIDPPLSLPIS 62

Query: 62  ERWRPVLIISAAVVQGETAVMVGVEEGVEEETAVEGGSPV--ESGS-----TKLYFGNLP 121
            +WR   I SAAV Q E A    VEE  E++   E G  V  E G+     TKLYFGNLP
Sbjct: 63  HKWRAPRI-SAAVAQEEAAATAPVEE--EQQQGQEEGEQVLREEGAESPVNTKLYFGNLP 122

Query: 122 YSVDSSQLAAIVQDHGVAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVIENLDGTAYMG 181
           YS DS+QLA I+Q++G  EL+EVLY+R+TG+SRGFAFVTMSS+EDCN VIENLDG+ Y G
Sbjct: 123 YSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGG 182

Query: 182 RILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYNGET 241
           R LRVNFSDKPKPK PLYPETEYKLFVGNLSWSVTSE L Q FQEYGNV+GARV+Y+GET
Sbjct: 183 RTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGET 242

Query: 242 GKSRGYGFVSYSTKSEMETALEALNEVELEGRVIRVSLAEGKQA 275
           G+SRGYGFV YSTK+EM+TALE+LN VELEGR IR+SLA+G+++
Sbjct: 243 GRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283

The following BLAST results are available for this feature:
BLAST of MELO3C006374 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ROC1_SPIOL6.4e-3944.3428 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1[more]
CP31B_ARATH1.1e-3838.31RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 S... [more]
ROC5_NICSY9.3e-3840.2833 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1[more]
RRP2_SPIOL2.1e-3740.6930S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1[more]
ROC3_NICSY1.7e-3638.7828 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1[more]
BLAST of MELO3C006374 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L496_CUCSA6.9e-14193.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134590 PE=4 SV=1[more]
B9SQT1_RICCO2.3e-8863.07Ribonucleoprotein, chloroplast, putative OS=Ricinus communis GN=RCOM_1217370 PE=... [more]
A0A067KAS6_JATCU4.0e-8861.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12870 PE=4 SV=1[more]
D7SZP1_VITVI3.4e-8764.44Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01930 PE=4 SV=... [more]
A0A059AUH8_EUCGR2.7e-8467.59Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00128 PE=4 SV=1[more]
BLAST of MELO3C006374 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G60000.11.4e-7160.62 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G50250.16.2e-4038.31 chloroplast RNA-binding protein 31B[more]
AT2G37220.11.4e-3638.46 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G24770.11.9e-3642.29 31-kDa RNA binding protein[more]
AT3G52380.14.1e-3637.75 chloroplast RNA-binding protein 33[more]
BLAST of MELO3C006374 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076017|ref|XP_008438454.1|5.3e-150100.00PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo][more]
gi|449432502|ref|XP_004134038.1|1.0e-14093.84PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus][more]
gi|255574887|ref|XP_002528350.1|3.4e-8863.07PREDICTED: 30 kDa ribonucleoprotein, chloroplastic [Ricinus communis][more]
gi|802633660|ref|XP_012077603.1|5.7e-8861.84PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha curcas][more]
gi|731389898|ref|XP_010650156.1|4.9e-8764.44PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0008150 biological_process
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005840 ribosome
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003729 mRNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU59118melon EST collection version 4.0transcribed_cluster
MU61607melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006374T3MELO3C006374T3mRNA
MELO3C006374T2MELO3C006374T2mRNA
MELO3C006374T1MELO3C006374T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59118MU59118transcribed_cluster
MU61607MU61607transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006374Csa3G134590Cucumber (Chinese Long) v2cumeB236
MELO3C006374Cla021482Watermelon (97103) v1mewmB461
MELO3C006374ClCG05G003980Watermelon (Charleston Gray)mewcgB427
MELO3C006374Cla97C05G084600Watermelon (97103) v2mewmbB434
MELO3C006374Bhi01G000470Wax gourdmewgoB545
MELO3C006374CSPI03G11540Wild cucumber (PI 183967)cpimeB230
MELO3C006374Cucsa.255820Cucumber (Gy14) v1cgymeB439
MELO3C006374CmaCh14G018440Cucurbita maxima (Rimu)cmameB242
MELO3C006374CmoCh06G012970Cucurbita moschata (Rifu)cmomeB755
MELO3C006374CmoCh14G018870Cucurbita moschata (Rifu)cmomeB230
MELO3C006374Lsi05G017740Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006374Cp4.1LG08g03180Cucurbita pepo (Zucchini)cpemeB813
MELO3C006374Cp4.1LG03g09660Cucurbita pepo (Zucchini)cpemeB585
MELO3C006374CsGy3G011600Cucumber (Gy14) v2cgybmeB200
MELO3C006374Carg16534Silver-seed gourdcarmeB0240
MELO3C006374CsaV3_3G011660Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006374Cucurbita pepo (Zucchini)cpemeB141
MELO3C006374Cucurbita pepo (Zucchini)cpemeB316
MELO3C006374Cucurbita pepo (Zucchini)cpemeB702
MELO3C006374Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006374Bottle gourd (USVL1VR-Ls)lsimeB382
MELO3C006374Cucumber (Gy14) v2cgybmeB126
MELO3C006374Cucumber (Gy14) v2cgybmeB216
MELO3C006374Silver-seed gourdcarmeB0236
MELO3C006374Silver-seed gourdcarmeB0780
MELO3C006374Silver-seed gourdcarmeB0941
MELO3C006374Silver-seed gourdcarmeB1050
MELO3C006374Cucumber (Chinese Long) v3cucmeB147
MELO3C006374Cucumber (Chinese Long) v3cucmeB253
MELO3C006374Watermelon (97103) v2mewmbB448
MELO3C006374Watermelon (97103) v2mewmbB451
MELO3C006374Wax gourdmewgoB514
MELO3C006374Wax gourdmewgoB534
MELO3C006374Wax gourdmewgoB552
MELO3C006374Melon (DHL92) v3.5.1memeB140
MELO3C006374Melon (DHL92) v3.5.1memeB147
MELO3C006374Cucumber (Gy14) v1cgymeB235
MELO3C006374Cucumber (Gy14) v1cgymeB625
MELO3C006374Cucurbita maxima (Rimu)cmameB343
MELO3C006374Cucurbita maxima (Rimu)cmameB580
MELO3C006374Cucurbita maxima (Rimu)cmameB763
MELO3C006374Cucurbita maxima (Rimu)cmameB850
MELO3C006374Cucurbita moschata (Rifu)cmomeB336
MELO3C006374Cucurbita moschata (Rifu)cmomeB568
MELO3C006374Cucurbita moschata (Rifu)cmomeB832
MELO3C006374Wild cucumber (PI 183967)cpimeB144
MELO3C006374Wild cucumber (PI 183967)cpimeB248
MELO3C006374Cucumber (Chinese Long) v2cumeB145
MELO3C006374Cucumber (Chinese Long) v2cumeB253
MELO3C006374Watermelon (Charleston Gray)mewcgB441
MELO3C006374Watermelon (Charleston Gray)mewcgB445
MELO3C006374Watermelon (97103) v1mewmB486
MELO3C006374Watermelon (97103) v1mewmB459