MELO3C006299.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C006299.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase)-related family protein
Locationchr06 : 2339941 .. 2344906 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCCAAATAAGCTGCCATGGCCATGGGAGAACTGAAGTTTCTCTCTACTTCTTCATCGTTTTGAATTTTTGTACAGACGAACAACGCGGAGAATCAGAATCTTTCTCGCTTCCGTGCAAATTCCGGCAGAATAAGGAGGGAAATGATGCTGGAATCGATAGAAGTTACACCGTCAGTACCTCCAAGCCTCGATCTCCAAGCAGTTCGCAGGTTTCTCTCTGTCTTGCTTCTGTGAGTCCTAATTATGTGTAACAATGTATAATTCGACGCCATTTTTTTTATCAGCGAGCTGGAAGAGCTGCAGAGATCTTTGGAGGAAAACGAAGATTCTTCGATGGATTCATTAGGTTCTGAGAAGTTACTGAGGGAGTGTGCTCTCCATCTCGAGGTTTTCTACTGCAATTTATCTTACTTTTCTCTATCTCTTGCTTTTTGTGTTAAGAGAAATGTGTGGCTCTTTTTCTTTGAAATGTGCAGAGCAGAATACAGCAGGTTCTGTCCGAATACTCTAATGTTGATAGTTTCTTGGGGATTGATGATCTAGGTAATCCTATTAAGCTTACGTTTATATTTCTTAAGGTCTGAATGCATTTATGTATGTGCATTTCAGAATTTCGTCCTCCATTGCGTTAGATGCTCTTTCCTTCATCTTAGTTACTTACTAAATTAACGACTTACATTCCTTTCCTGCCTTTTGATCCATCTCTCCAATGTTTTTTCTTTCGTAATTTGTTAAATCTATATCTAGATGCATATGTCGAAAATATGAAAGAGGAACTCGTCGCGGTGGAAGCTGAAAGCAGCAAAATATCCAATGAGATCGAGGTTCTTAAGAGAACCAATATAGAAGGCAGTCTCTTCGTTTATGTTTTGATTTATACTTTTTAGCCTCCTATTTGTGTTGACGTCCTTCTTTGGCTTTCATTTACAGATTCTAATAAATTGAAGATGGATCTTGAAGTATTGAAATTGTCGTTAGATCGTTTTGCTTCACAGGTTGGTCTCTACTGCAAACAAATTTTTACTATACCAACAGTTACTGAATTAGGTTTAGGTGATGGAGACTATACTTTGATGAATTTTTTCTTAAAAGTTGCAATGCTAATGTTGAAAAAGGATATATCAAGTAATTCCAACTATGAAAGGTGGTTATGGCTTGTATTCGTTTCAATAATTAGACGAATGAGAAATAAGGGCAAAAACCAGATGGAGGAAGTTCTAGGAAATCTAACACCTGAATTTTTTTTTTCACCGAAGTCGTATTATTTAGTAGGTTTGCTCCTTCAGTTATTTAATTTGTTTGATTTGTCAGTATGTAAAAAAGAAAAAAGAAAATAGATTCTTTAACATATTGGATAAGATATTTTGCAAATGTTTCTCTAGGCATTACTGCCAATGCTTTGTTTTTGTCTACATGTCTCTCTCTGTCTCCCTCTCTGCTTTTTCCCCCCTCCTTCCAACGATTGCCTTCAATTTGGTTCTGTGATTTGATTTTGTCTATTTTGTTTGGCCTAACGTATGATTAGCATAACTTGTCTATGCGCCTAATCAAAGGTTCTTCTCCAAGTGAGACTGTCTGTCACCATGTTATCATTACAATTTACAATCTTGTAGGATCCTGAAGAGGCAACATTTAATTGCAGCTCTATGAATGGTGAAGATCGGATGAACGTGATAGTTGACCGTGAATGCAATGCATTTGAGGTTGGTTCTATCACTTTATTGCTTCTGACTTCATTTTTGGTGGTCATATGTTCCCTATCAAATTTTGATCAATTATAAGCAAGTTCCTAGGGAACGTGCAATTTAATGATGCTGAATTAAAATGCATGGTTTCACCAACTGTTTTTTAAAGGAAACGAGAATTTCATGAAGATAATAATAATAATAATAATCTAAAAAAATTACAAAAATTGAAAGTACACATGGATATTGCATAGAAGAAAAATAAACTAAGGATCAATAGATTTCATGAACTGTTTCAACCATGACTTTGTATCTTAATGACAAACTCTATGTGGTTTGACTTCTTCTGAAGTGGGGTTCTTTTTTTTACCCATTCATGTATATAAGGCTTACAATCATCAACTATTTTATGGAACTGTTCATGCTTCTTCCAGGTTTTGGAACTTGAAAGTCAGATTGAGAAGAACAAAAAAATTCTAAAATCTTTGCAGGAAGTAGATGAGATATTTAAAAGGTAAGTTGTGTTTTGAGATGTGAATTGTTGTATTTAAATCTCTTGATCTTAAAACCACCTTCAGTTATGCAACTCGGTTTTGTCTCTAACTTACGTCTCCCGAGCTTAAGATTTTTAATCTAAGATCAATTAACCTATGATCGGTAAATTAGGAGCATGAAGAACAGAGAAACATTAATAAGACAACCAAATTCATTCAATCAAGAGTAATAAGAAATTGATCTATAAAATATGGAGGCTACATCAATCCCTAAGAGCTAAAAGTTTAGCTATTCGTGTTTAGCGCTACACAATCAAATCTAATGAAAATACGGTACTAAAGAGAGATTATTTTGGAAGAGGAGAAAAACTAAATCCAATGTGTCAATCGTCCGTCCTCAAAGAGATATCCACAATCTTGAGCCTCAAATATCTTTTTCCTCCGCTCCAATATGCTGTCCTTGCCCTCAGTTTTGATTGAAATATCTTAAATCTGTAAATTTCTCTTTGTTGAGTCTACCTGCTCGAGTGCACAAAACCTTAGTTTTATAAAATGGGTTGTGCTATTGCCATGGCATTGTAGGTAGGTGCCATGGTGCTGCCCTCAATTAAGAGGGAAATTAGAAGTTCGGAGCGCCAAGCCATGACCTTTATATCTTGTGGTAGCACCATTTTCTTGTTTTTTCTTTGTTCTGCCGTAGCACCACATTTTTGTGACAAGCACCTAGGTGCTATTTCCTCGTATAAGAGGCTCCTACTATCTTTGTATCGTATTCTTCTCGCATAGAGATTCTGATTATCTTCAAATATCTATACTGCGTCTAGATCTTCATCTCTCTCTTCATTGTTTTATTCATAAATAATAAAATTATATGTGCACAAATCGGACATGATTATCGCAAAAGTAACAGCAATCAAGTTATAGTTCACATGAATTATATCTCACGAAGTGTGCTATCAATTTAATACCAACGCTTTCTCTCTCCCATCCTCCCTCATAACTCTCTCCTTTTAGTTTGGATGTTATTGAGCAGGTTGAGGGCACAATTGGTGGTATGAAGGTCATTGACGTCGCTGATAATTCCATTAGATTGTCATTACACACACATATTCCAAACGTGGAAGATTTTTCAACTTTACAAAGACTTGAAGGTTTGATTGAGAAATCTGAATCGGATCACGAGTTGATAATAGAAGTTTCGAATGGGACAATGGAGTTAAAGAATGCTGAGGTATATTTCGTTACGTACCACAATTAATTGTATCCATGGCTATCTTGGTCTAATCACGAGTTGATAATAAAATCTGTTGGCACCTCTTTTTATCTTTCTTTTATGTAATCTCTGTTGAAGTGGCTTAAATGATTAGTAATTTGCACAGATCTTTCCTGCTGATGTCCACTTGCATGATATCATCAATGCTTCAAAGTCTATCAGGTATGTTCGCTATAAGATTCCTGTATGCATCTGGCTCCATTGTAGTCAAGAAGAATTGGGAGAAACTGGAAAGATTCTGTTTCTTAAATTGTAATGATTTGGCTACTCTTTGAACTCTTTTGGTCGGTTGGAATTGGAATCGAGATCATTATATTTGAACTGTTATTAAGTTGGCTTATTTTCACCGAGAGAGAGAGAGAGAGTGACGTTAATGGAACCTGCAGTTTAATTAAGCATATCTAGCTGGCTCTGGCGTTTTGTGGTTACATATTATCTAGCTGCGATAAATATCATATAATGACATCAAATCTATCTTTCCGTATTTGAAATGATTTGGCTACCATTTTGCAAGAATTTTCCACTTGTGAAACCGAGCAATTTATCTGACCCATTCATTGGTTTTGCACGAGCAGCAATTCTTCATTGGAATGGTTTGTAAGAAAAGTACAAGATAGGATTGTTTTGTGTACTCTTAGGCGGTTTGCTGTGAAGAGTGCAAACAAATCAAGGTGAGTCTCGTAAAATTTTCAGATCCCTTGTATAAGTAAAATTAATGTATAAATAAATAGTAGGGATTCCCCCCCCCCCCTTGTGTCCACCTCCCTACAGGAATTCGTCAACCGGCATTTCCGATATGACACCGGGATGGGGAATGCACCTCAATCATGACGTAAAATAATGTAATTTCTATCTTTTATTAATTGTTGAGACTGAACTGCTTACTTTTCATGCAGTCATTCCTTTGAGTATTTGGATCAAGACGAAATGATAATGTGTAGTATGATTGGAGGGATTGATGCGTGTATTAAGGTGTCTCAAGGTTGGCCATTAGCCGATTCTCCTCTGAAACTTATATCACTCAAGAGCTCAGATCATTATACAAAAGGAATTTCTTTAAGCCTCATTTGCAAGGTGGAGGTAAGATGGGTCTCGTTTTCCTTTTTATCCTTTTTTATCTTTCTTGATACCTGAAAAAGTCTAGTCTGCCAAAAACTGGATCAAATTAGTCTATATATACATATATAAATATAGTGTATGTCATTAGGGCATTATGAGTATATGCATCTTTCTGATTATGTTTGCATCCTTCAGAAAATGGCAAATTCCTTGGACGCTCGTATTCGCCAAAATCTATCAAGCTTTGCAGACGCTGTTGAGAAAATATTGAAGGAGCAGATGCATTTAGAACTCCAAGCTGACAGTGGTTAGGACCTTTGGCTCTTCGTCATGCGATTCAGGTTTCTAAATTCTATCTACTTCTTATAACTGCCCTGTAAAGTCGTTTCCGATGAATTTTCATGCTGAAAATTTTAGCTCAATTATTAATTGCTATTTTATATATATATATTC

mRNA sequence

GGTCCAAATAAGCTGCCATGGCCATGGGAGAACTGAAGTTTCTCTCTACTTCTTCATCGTTTTGAATTTTTGTACAGACGAACAACGCGGAGAATCAGAATCTTTCTCGCTTCCGTGCAAATTCCGGCAGAATAAGGAGGGAAATGATGCTGGAATCGATAGAAGTTACACCGTCAGTACCTCCAAGCCTCGATCTCCAAGCAGTTCGCAGCGAGCTGGAAGAGCTGCAGAGATCTTTGGAGGAAAACGAAGATTCTTCGATGGATTCATTAGGTTCTGAGAAGTTACTGAGGGAGTGTGCTCTCCATCTCGAGAGCAGAATACAGCAGGTTCTGTCCGAATACTCTAATGTTGATAGTTTCTTGGGGATTGATGATCTAGATGCATATGTCGAAAATATGAAAGAGGAACTCGTCGCGGTGGAAGCTGAAAGCAGCAAAATATCCAATGAGATCGAGGTTCTTAAGAGAACCAATATAGAAGATTCTAATAAATTGAAGATGGATCTTGAAGTATTGAAATTGTCGTTAGATCGTTTTGCTTCACAGGATCCTGAAGAGGCAACATTTAATTGCAGCTCTATGAATGGTGAAGATCGGATGAACGTGATAGTTGACCGTGAATGCAATGCATTTGAGGTTTTGGAACTTGAAAGTCAGATTGAGAAGAACAAAAAAATTCTAAAATCTTTGCAGGAAGTAGATGAGATATTTAAAAGTTTGGATGTTATTGAGCAGGTTGAGGGCACAATTGGTGGTATGAAGGTCATTGACGTCGCTGATAATTCCATTAGATTGTCATTACACACACATATTCCAAACGTGGAAGATTTTTCAACTTTACAAAGACTTGAAGGTTTGATTGAGAAATCTGAATCGGATCACGAGTTGATAATAGAAGTTTCGAATGGGACAATGGAGTTAAAGAATGCTGAGAGATCTTTCCTGCTGATGTCCACTTGCATGATATCATCAATGCTTCAAAGTCTATCAGCAATTCTTCATTGGAATGGTTTGTAAGAAAAGTACAAGATAGGATTGTTTTGTGTACTCTTAGGCGGTTTGCTGTGAAGAGTGCAAACAAATCAAGTCATTCCTTTGAGTATTTGGATCAAGACGAAATGATAATGTGTAGTATGATTGGAGGGATTGATGCGTGTATTAAGGTGTCTCAAGGTTGGCCATTAGCCGATTCTCCTCTGAAACTTATATCACTCAAGAGCTCAGATCATTATACAAAAGGAATTTCTTTAAGCCTCATTTGCAAGGTGGAGAAAATGGCAAATTCCTTGGACGCTCGTATTCGCCAAAATCTATCAAGCTTTGCAGACGCTGTTGAGAAAATATTGAAGGAGCAGATGCATTTAGAACTCCAAGCTGACAGTGGTTAGGACCTTTGGCTCTTCGTCATGCGATTCAGGTTTCTAAATTCTATCTACTTCTTATAACTGCCCTGTAAAGTCGTTTCCGATGAATTTTCATGCTGAAAATTTTAGCTCAATTATTAATTGCTATTTTATATATATATATTC

Coding sequence (CDS)

ATGATGCTGGAATCGATAGAAGTTACACCGTCAGTACCTCCAAGCCTCGATCTCCAAGCAGTTCGCAGCGAGCTGGAAGAGCTGCAGAGATCTTTGGAGGAAAACGAAGATTCTTCGATGGATTCATTAGGTTCTGAGAAGTTACTGAGGGAGTGTGCTCTCCATCTCGAGAGCAGAATACAGCAGGTTCTGTCCGAATACTCTAATGTTGATAGTTTCTTGGGGATTGATGATCTAGATGCATATGTCGAAAATATGAAAGAGGAACTCGTCGCGGTGGAAGCTGAAAGCAGCAAAATATCCAATGAGATCGAGGTTCTTAAGAGAACCAATATAGAAGATTCTAATAAATTGAAGATGGATCTTGAAGTATTGAAATTGTCGTTAGATCGTTTTGCTTCACAGGATCCTGAAGAGGCAACATTTAATTGCAGCTCTATGAATGGTGAAGATCGGATGAACGTGATAGTTGACCGTGAATGCAATGCATTTGAGGTTTTGGAACTTGAAAGTCAGATTGAGAAGAACAAAAAAATTCTAAAATCTTTGCAGGAAGTAGATGAGATATTTAAAAGTTTGGATGTTATTGAGCAGGTTGAGGGCACAATTGGTGGTATGAAGGTCATTGACGTCGCTGATAATTCCATTAGATTGTCATTACACACACATATTCCAAACGTGGAAGATTTTTCAACTTTACAAAGACTTGAAGGTTTGATTGAGAAATCTGAATCGGATCACGAGTTGATAATAGAAGTTTCGAATGGGACAATGGAGTTAAAGAATGCTGAGAGATCTTTCCTGCTGATGTCCACTTGCATGATATCATCAATGCTTCAAAGTCTATCAGCAATTCTTCATTGGAATGGTTTGTAA

Protein sequence

MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKMDLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLIEKSESDHELIIEVSNGTMELKNAERSFLLMSTCMISSMLQSLSAILHWNGL
BLAST of MELO3C006299.2 vs. NCBI nr
Match: XP_008438339.1 (PREDICTED: uncharacterized protein LOC103483469 [Cucumis melo])

HSP 1 Score: 488.0 bits (1255), Expect = 2.2e-134
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0

Query: 1   MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI 60
           MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI
Sbjct: 1   MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI 60

Query: 61  QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120
           QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM
Sbjct: 61  QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120

Query: 121 DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL 180
           DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL
Sbjct: 121 DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL 180

Query: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240
           KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI
Sbjct: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240

Query: 241 EKSESDHELIIEVSNGTMELKNAE 265
           EKSESDHELIIEVSNGTMELKNAE
Sbjct: 241 EKSESDHELIIEVSNGTMELKNAE 264

BLAST of MELO3C006299.2 vs. NCBI nr
Match: XP_004133985.1 (PREDICTED: uncharacterized protein LOC101211137 [Cucumis sativus] >KGN56719.1 hypothetical protein Csa_3G129760 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 9.8e-127
Identity = 251/264 (95.08%), Postives = 257/264 (97.35%), Query Frame = 0

Query: 1   MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI 60
           MM ES+E TPSVPPSLDLQAVRSELEELQRSLEENE+S+ DSLGSEKLLRECALHLESRI
Sbjct: 1   MMPESMEATPSVPPSLDLQAVRSELEELQRSLEENEESTTDSLGSEKLLRECALHLESRI 60

Query: 61  QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120
           QQVLSEYSNVDSFLGIDDLDAYVE+MKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM
Sbjct: 61  QQVLSEYSNVDSFLGIDDLDAYVEHMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120

Query: 121 DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL 180
           DLEVLKLSLDRF SQDPEEATFNCSSMNGED MNVIV+RECNAFEVLELESQIEKNKKIL
Sbjct: 121 DLEVLKLSLDRFPSQDPEEATFNCSSMNGEDPMNVIVNRECNAFEVLELESQIEKNKKIL 180

Query: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240
           KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI
Sbjct: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240

Query: 241 EKSESDHELIIEVSNGTMELKNAE 265
           EKSE DHELIIEV +GTMELKNAE
Sbjct: 241 EKSELDHELIIEVLDGTMELKNAE 264

BLAST of MELO3C006299.2 vs. NCBI nr
Match: XP_023528068.1 (uncharacterized protein LOC111791098 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 6.6e-107
Identity = 217/263 (82.51%), Postives = 237/263 (90.11%), Query Frame = 0

Query: 2   MLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRIQ 61
           M ES+E TPSV  SLDLQAVRSELEELQRSLEE+E    DSLGSEKLL+ECALHLESR+Q
Sbjct: 5   MPESMEATPSVSSSLDLQAVRSELEELQRSLEEDEAYCTDSLGSEKLLKECALHLESRLQ 64

Query: 62  QVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKMD 121
           QVLSE SNVDSFL IDDLDAYVE+MKEELVAVEAESSKISNEIEVLKRTNIE SNKL++D
Sbjct: 65  QVLSECSNVDSFLRIDDLDAYVEHMKEELVAVEAESSKISNEIEVLKRTNIEGSNKLEVD 124

Query: 122 LEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKILK 181
           LE+L +SLDRF SQDPE  TFN  SMNGED+MNVIVD ECNAFEVLEL+S IEKNK+ILK
Sbjct: 125 LELLNVSLDRFTSQDPENETFNFCSMNGEDQMNVIVDPECNAFEVLELDSHIEKNKRILK 184

Query: 182 SLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLIE 241
           SLQEVDEIFKSLDV+EQVE TIGG+KVIDVADN IRLSL THIPN+EDFS+LQ+LEG+IE
Sbjct: 185 SLQEVDEIFKSLDVVEQVEDTIGGLKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEGMIE 244

Query: 242 KSESDHELIIEVSNGTMELKNAE 265
            SE +HEL+IEV  GTMELKNAE
Sbjct: 245 PSELNHELLIEVLEGTMELKNAE 267

BLAST of MELO3C006299.2 vs. NCBI nr
Match: XP_022147070.1 (uncharacterized protein LOC111016098 [Momordica charantia])

HSP 1 Score: 395.2 bits (1014), Expect = 1.9e-106
Identity = 214/266 (80.45%), Postives = 241/266 (90.60%), Query Frame = 0

Query: 2   MLESIEVTPSVPPSLDLQAVR---SELEELQRSLEENEDSSMDSLGSEKLLRECALHLES 61
           M ES+E TPSVPP LDLQAVR   SELEELQRSLEE+E SS DSLGSEKLL+ECALHLES
Sbjct: 1   MPESMEATPSVPPILDLQAVRCRISELEELQRSLEEDEASSTDSLGSEKLLKECALHLES 60

Query: 62  RIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121
           R+QQ+LSE+SNVDSFLGIDDLDAYVE+MKEELV VEAESSKISNEIE +KR NIEDSN+L
Sbjct: 61  RLQQILSEFSNVDSFLGIDDLDAYVEHMKEELVMVEAESSKISNEIEAIKRNNIEDSNRL 120

Query: 122 KMDLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKK 181
           KMDLEVLKLSLDR  S+DPE+ATFNC S +GED++N+I  RECNAFEVL+L+SQIE+NK+
Sbjct: 121 KMDLEVLKLSLDRLTSEDPEKATFNCRSPDGEDQINMIDKRECNAFEVLQLDSQIEQNKR 180

Query: 182 ILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEG 241
           ILKSLQE+DEIFKSLDVIEQVE TIGG+KVIDVA+N IRLSL THIPN+ED S+LQRLEG
Sbjct: 181 ILKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVAENFIRLSLRTHIPNLEDLSSLQRLEG 240

Query: 242 LIEKSESDHELIIEVSNGTMELKNAE 265
           +IE SE +HEL+IEV  GTMELKNAE
Sbjct: 241 VIEPSELNHELLIEVLEGTMELKNAE 266

BLAST of MELO3C006299.2 vs. NCBI nr
Match: XP_023528067.1 (uncharacterized protein LOC111791098 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528069.1 uncharacterized protein LOC111791098 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 2.8e-105
Identity = 217/266 (81.58%), Postives = 237/266 (89.10%), Query Frame = 0

Query: 2   MLESIEVTPSVPPSLDLQAVR---SELEELQRSLEENEDSSMDSLGSEKLLRECALHLES 61
           M ES+E TPSV  SLDLQAVR   SELEELQRSLEE+E    DSLGSEKLL+ECALHLES
Sbjct: 5   MPESMEATPSVSSSLDLQAVRSRISELEELQRSLEEDEAYCTDSLGSEKLLKECALHLES 64

Query: 62  RIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121
           R+QQVLSE SNVDSFL IDDLDAYVE+MKEELVAVEAESSKISNEIEVLKRTNIE SNKL
Sbjct: 65  RLQQVLSECSNVDSFLRIDDLDAYVEHMKEELVAVEAESSKISNEIEVLKRTNIEGSNKL 124

Query: 122 KMDLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKK 181
           ++DLE+L +SLDRF SQDPE  TFN  SMNGED+MNVIVD ECNAFEVLEL+S IEKNK+
Sbjct: 125 EVDLELLNVSLDRFTSQDPENETFNFCSMNGEDQMNVIVDPECNAFEVLELDSHIEKNKR 184

Query: 182 ILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEG 241
           ILKSLQEVDEIFKSLDV+EQVE TIGG+KVIDVADN IRLSL THIPN+EDFS+LQ+LEG
Sbjct: 185 ILKSLQEVDEIFKSLDVVEQVEDTIGGLKVIDVADNFIRLSLRTHIPNLEDFSSLQKLEG 244

Query: 242 LIEKSESDHELIIEVSNGTMELKNAE 265
           +IE SE +HEL+IEV  GTMELKNAE
Sbjct: 245 MIEPSELNHELLIEVLEGTMELKNAE 270

BLAST of MELO3C006299.2 vs. TAIR10
Match: AT3G23910.1 (BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2))

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 96/253 (37.94%), Postives = 156/253 (61.66%), Query Frame = 0

Query: 15  SLDLQAVRSELEELQ---RSLEENEDSSMDSLGSEKLLRECALHLESRIQQVLSEYSNVD 74
           SLDLQ +R  ++EL    R+  E    S  S     ++++  L  E ++++++ EY +VD
Sbjct: 9   SLDLQEIRRRVKELDFFPRNCREEPVESCSSDYETLVVQDFVLQFEPKVKEIVEEYGDVD 68

Query: 75  SFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKMDLEVLKLSLDR 134
             L ++D DAY+E ++ EL +VEAES+K+S EIE L +++ +DS++L+ DLE L LSLD 
Sbjct: 69  -LLDVEDSDAYLEYLRNELQSVEAESAKVSEEIERLSQSHAQDSSRLQRDLEGLLLSLDS 128

Query: 135 FASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKILKSLQEVDEIFK 194
            +SQD E++  N  S +  +   VI D   + F++ ELE+Q+E+ + ILKSL+++D + K
Sbjct: 129 MSSQDVEKSKENQPSSSSMEVCEVIDD---DKFKMFELENQMEEKRMILKSLEDLDSLRK 188

Query: 195 SLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLIEKSESDHELII 254
             D  EQVE  + G+KV++   N IRL L T+I  ++ F    + + + E SE  HEL+I
Sbjct: 189 RFDAAEQVEDALTGLKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLI 248

Query: 255 EVSNGTMELKNAE 265
            + + T E+   E
Sbjct: 249 YLKDKTTEITKFE 257

BLAST of MELO3C006299.2 vs. TAIR10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28
Identity = 76/185 (41.08%), Postives = 118/185 (63.78%), Query Frame = 0

Query: 80  DAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKMDLEVLKLSLDRFASQDPEE 139
           DAY+E ++ EL +VEAES+K+S EIE L +++  DS++L+ DLE L LSLD  +SQD E+
Sbjct: 401 DAYLEYLRNELQSVEAESAKVSEEIERLSQSHALDSSRLQRDLEGLLLSLDSMSSQDVEK 460

Query: 140 ATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKILKSLQEVDEIFKSLDVIEQV 199
           +  N  S +  +   VI D   + F++ ELE+Q+E+ + ILKSL+++D + K  D  EQV
Sbjct: 461 SKENQPSSSSMEVCEVIDD---DKFKMFELENQMEEKRMILKSLEDLDSLRKRFDAAEQV 520

Query: 200 EGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLIEKSESDHELIIEVSNGTME 259
           E  + G+KV++   N IRL L T+I  ++ F    + + + E SE  HEL+I + + T E
Sbjct: 521 EDALTGLKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLIYLKDKTTE 580

Query: 260 LKNAE 265
           +   E
Sbjct: 581 ITKFE 582

BLAST of MELO3C006299.2 vs. TrEMBL
Match: tr|A0A1S3AVT7|A0A1S3AVT7_CUCME (uncharacterized protein LOC103483469 OS=Cucumis melo OX=3656 GN=LOC103483469 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.4e-134
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0

Query: 1   MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI 60
           MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI
Sbjct: 1   MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI 60

Query: 61  QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120
           QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM
Sbjct: 61  QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120

Query: 121 DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL 180
           DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL
Sbjct: 121 DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL 180

Query: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240
           KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI
Sbjct: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240

Query: 241 EKSESDHELIIEVSNGTMELKNAE 265
           EKSESDHELIIEVSNGTMELKNAE
Sbjct: 241 EKSESDHELIIEVSNGTMELKNAE 264

BLAST of MELO3C006299.2 vs. TrEMBL
Match: tr|A0A0A0L6Q3|A0A0A0L6Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129760 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 6.5e-127
Identity = 251/264 (95.08%), Postives = 257/264 (97.35%), Query Frame = 0

Query: 1   MMLESIEVTPSVPPSLDLQAVRSELEELQRSLEENEDSSMDSLGSEKLLRECALHLESRI 60
           MM ES+E TPSVPPSLDLQAVRSELEELQRSLEENE+S+ DSLGSEKLLRECALHLESRI
Sbjct: 1   MMPESMEATPSVPPSLDLQAVRSELEELQRSLEENEESTTDSLGSEKLLRECALHLESRI 60

Query: 61  QQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120
           QQVLSEYSNVDSFLGIDDLDAYVE+MKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM
Sbjct: 61  QQVLSEYSNVDSFLGIDDLDAYVEHMKEELVAVEAESSKISNEIEVLKRTNIEDSNKLKM 120

Query: 121 DLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKKIL 180
           DLEVLKLSLDRF SQDPEEATFNCSSMNGED MNVIV+RECNAFEVLELESQIEKNKKIL
Sbjct: 121 DLEVLKLSLDRFPSQDPEEATFNCSSMNGEDPMNVIVNRECNAFEVLELESQIEKNKKIL 180

Query: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240
           KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI
Sbjct: 181 KSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEGLI 240

Query: 241 EKSESDHELIIEVSNGTMELKNAE 265
           EKSE DHELIIEV +GTMELKNAE
Sbjct: 241 EKSELDHELIIEVLDGTMELKNAE 264

BLAST of MELO3C006299.2 vs. TrEMBL
Match: tr|A0A061ESE1|A0A061ESE1_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_020266 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 134/269 (49.81%), Postives = 186/269 (69.14%), Query Frame = 0

Query: 2   MLESIEVTPSVPPSLDLQAVRS---ELEELQRSLEENEDSSMDSLGSEKLLRECALHLES 61
           M E +E++ S   +LDL ++RS   EL E+ R  +  ++    SL SEKLL++C+LH ES
Sbjct: 1   MAEPMEISSS-SEALDLHSIRSRINELSEIHRIDKNKDEGEALSLNSEKLLKDCSLHFES 60

Query: 62  RIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121
           +++Q++ EYS+V  FLGI+DLD Y+ ++KEEL  VEAES+KISNEIE L R +IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDEYLAHLKEELNQVEAESAKISNEIEDLSRNHIEESNIL 120

Query: 122 KMDLEVLKLSLDRFASQ---DPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEK 181
           + +LE LK +LD  ASQ     EE     SSMN ED+ N++   E   FE++ELESQIEK
Sbjct: 121 EGNLEGLKYALDSIASQGMEGVEEDPCLDSSMNDEDQSNLMHSNEEQKFEIMELESQIEK 180

Query: 182 NKKILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQR 241
           N  ILKSLQ++D +FK LD +EQ+E  + G+KVI    N IRLSL T+IP +E     + 
Sbjct: 181 NNIILKSLQDLDSMFKRLDTLEQIEDALTGLKVIGFDGNCIRLSLQTYIPKLEGLLCQKT 240

Query: 242 LEGLIEKSESDHELIIEVSNGTMELKNAE 265
           +E + E SE +HEL++E+ +GTME+KN E
Sbjct: 241 IEDISEPSEMNHELLVEIVDGTMEIKNVE 267

BLAST of MELO3C006299.2 vs. TrEMBL
Match: tr|A0A061ELH0|A0A061ELH0_THECC (Uncharacterized protein isoform 5 OS=Theobroma cacao OX=3641 GN=TCM_020266 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 134/269 (49.81%), Postives = 186/269 (69.14%), Query Frame = 0

Query: 2   MLESIEVTPSVPPSLDLQAVRS---ELEELQRSLEENEDSSMDSLGSEKLLRECALHLES 61
           M E +E++ S   +LDL ++RS   EL E+ R  +  ++    SL SEKLL++C+LH ES
Sbjct: 1   MAEPMEISSS-SEALDLHSIRSRINELSEIHRIDKNKDEGEALSLNSEKLLKDCSLHFES 60

Query: 62  RIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121
           +++Q++ EYS+V  FLGI+DLD Y+ ++KEEL  VEAES+KISNEIE L R +IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDEYLAHLKEELNQVEAESAKISNEIEDLSRNHIEESNIL 120

Query: 122 KMDLEVLKLSLDRFASQ---DPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEK 181
           + +LE LK +LD  ASQ     EE     SSMN ED+ N++   E   FE++ELESQIEK
Sbjct: 121 EGNLEGLKYALDSIASQGMEGVEEDPCLDSSMNDEDQSNLMHSNEEQKFEIMELESQIEK 180

Query: 182 NKKILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQR 241
           N  ILKSLQ++D +FK LD +EQ+E  + G+KVI    N IRLSL T+IP +E     + 
Sbjct: 181 NNIILKSLQDLDSMFKRLDTLEQIEDALTGLKVIGFDGNCIRLSLQTYIPKLEGLLCQKT 240

Query: 242 LEGLIEKSESDHELIIEVSNGTMELKNAE 265
           +E + E SE +HEL++E+ +GTME+KN E
Sbjct: 241 IEDISEPSEMNHELLVEIVDGTMEIKNVE 267

BLAST of MELO3C006299.2 vs. TrEMBL
Match: tr|A0A061EKP3|A0A061EKP3_THECC (Uncharacterized protein isoform 6 OS=Theobroma cacao OX=3641 GN=TCM_020266 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 134/269 (49.81%), Postives = 186/269 (69.14%), Query Frame = 0

Query: 2   MLESIEVTPSVPPSLDLQAVRS---ELEELQRSLEENEDSSMDSLGSEKLLRECALHLES 61
           M E +E++ S   +LDL ++RS   EL E+ R  +  ++    SL SEKLL++C+LH ES
Sbjct: 1   MAEPMEISSS-SEALDLHSIRSRINELSEIHRIDKNKDEGEALSLNSEKLLKDCSLHFES 60

Query: 62  RIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121
           +++Q++ EYS+V  FLGI+DLD Y+ ++KEEL  VEAES+KISNEIE L R +IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDEYLAHLKEELNQVEAESAKISNEIEDLSRNHIEESNIL 120

Query: 122 KMDLEVLKLSLDRFASQ---DPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEK 181
           + +LE LK +LD  ASQ     EE     SSMN ED+ N++   E   FE++ELESQIEK
Sbjct: 121 EGNLEGLKYALDSIASQGMEGVEEDPCLDSSMNDEDQSNLMHSNEEQKFEIMELESQIEK 180

Query: 182 NKKILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQR 241
           N  ILKSLQ++D +FK LD +EQ+E  + G+KVI    N IRLSL T+IP +E     + 
Sbjct: 181 NNIILKSLQDLDSMFKRLDTLEQIEDALTGLKVIGFDGNCIRLSLQTYIPKLEGLLCQKT 240

Query: 242 LEGLIEKSESDHELIIEVSNGTMELKNAE 265
           +E + E SE +HEL++E+ +GTME+KN E
Sbjct: 241 IEDISEPSEMNHELLVEIVDGTMEIKNVE 267

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008438339.12.2e-134100.00PREDICTED: uncharacterized protein LOC103483469 [Cucumis melo][more]
XP_004133985.19.8e-12795.08PREDICTED: uncharacterized protein LOC101211137 [Cucumis sativus] >KGN56719.1 hy... [more]
XP_023528068.16.6e-10782.51uncharacterized protein LOC111791098 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022147070.11.9e-10680.45uncharacterized protein LOC111016098 [Momordica charantia][more]
XP_023528067.12.8e-10581.58uncharacterized protein LOC111791098 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
Match NameE-valueIdentityDescription
AT3G23910.11.5e-3637.94BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse... [more]
AT3G24255.11.5e-2841.08RNA-directed DNA polymerase (reverse transcriptase)-related family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3AVT7|A0A1S3AVT7_CUCME1.4e-134100.00uncharacterized protein LOC103483469 OS=Cucumis melo OX=3656 GN=LOC103483469 PE=... [more]
tr|A0A0A0L6Q3|A0A0A0L6Q3_CUCSA6.5e-12795.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129760 PE=4 SV=1[more]
tr|A0A061ESE1|A0A061ESE1_THECC1.9e-5449.81Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_020266 PE=4 ... [more]
tr|A0A061ELH0|A0A061ELH0_THECC1.9e-5449.81Uncharacterized protein isoform 5 OS=Theobroma cacao OX=3641 GN=TCM_020266 PE=4 ... [more]
tr|A0A061EKP3|A0A061EKP3_THECC1.9e-5449.81Uncharacterized protein isoform 6 OS=Theobroma cacao OX=3641 GN=TCM_020266 PE=4 ... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006299.2.1MELO3C006299.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..110
NoneNo IPR availableCOILSCoilCoilcoord: 18..38
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availablePANTHERPTHR36037FAMILY NOT NAMEDcoord: 15..263

The following gene(s) are paralogous to this gene:

None