Cp4.1LG08g02690 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g02690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RNA-directed DNA polymerase (reverse transcriptase)-related family protein
Location	Cp4.1LG08 : 2626207 .. 2633905 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGGGACCGGTCCCGCGGTTCTCTGCTGTTGTGCTTAATCCTTCGGCTTCTCAATTACGCGGGCTAAATCTTGCAACTCAAACCTAATATAAAAAGCCCACGGCCTCCATTTTCGGGTTTGGTCCAAAACACTAAAGAACCCCCGCGGGTACCGAAGAATTCTCTCCCCTTCTCTCTCAATTTGAACTTTTGCGCGGACGAATAAGTGCGAGGAATCTCGTTCGGATTCTGTGCAAATTCCGGCAGAGGTAAAGGAGAAAATAATGGCAGAATTGATGGAAGCTACTCCGTCTGTGTCTCCAAGCGTCGATGTCCAAGCAGTTCGCAGGTTTCTCTATCTTGTTTCTGTGTGCAGTAATTATGTGAAACAATGTATAATTAATTGGACGACATTTTTACTCTTATTGAAGTTGCATAAGCGAGATAGAAGAGTTGCAGAGATCTTTGGAGGAAGATGAAGCTTATACGACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAGTGTTCTCTCCTTCTCGAGGTTTAGTATTGTAGTTGATCGTGCTTTTCTTCATCTCTTAAAATATCTCTCGTTTTTGTTTTTTTTATTTATGTGGCTCTTTTTCTTTGAGATGTGCAGAGCAGACTACAGCAGACTCTGTCAGAATGGTCTAACGTAGATAGTTTCTTGGGGATTGATGATTTAGGTAATTTTGTTGAGCTTGTTTTTAAATTTCCGTAGACTGGAATGCATTTGTATGCTTGCATTTCAAATTTTCATTCTCTGTTCTGTTAAATGGATTTTCCTTCTTTTAAGTTACTATTACAGTGTTATCGACTTGTGTTTACTTTCCTGCGTTTTGATCGATCTCTCCAATGCTTTTTCTTCATAATTTGTTAAATATCTTTCTAGACGCATATGTTGAACGTATGAAAGAGGAACTTATCGCGGTGGAAGCTGAAAGCAGCAAAATCTCCAGTGAGATCGAGGTTCTTAAGAGAACCAGTATAGAAGGTAGGACTGTTTGTTTATCTTTTAATTTACACTTCTTATCCTCCTATTTGTGTTGACGTCCTCATTTTGCTTCCAATTACAGATTCGAATAAATTGAGGATGGATCTTGAAGTATTAAAATTGTCGTTAGATCGTTGTGCATCACAGGTTGGTCTCTATTACAAACAAATTTTTACAACACCAACAGTTACTGGACTAGGATGAGCGGATAGAGACCAAGATTTAACATAAGTTTTCTAAAAGTATGCATTGCTTGAATGTTGAAAACGGATTGTATCGAACAAGTCCAATTACGGAAGGTGAATGTGGATTGTATTCACTTGGATTTCAATAAATCTTAGGCGAATTGAGAAATAATGGGGGAGCAAATGGCGGAAGCTATAGGAAATGTAATGTCTGACAAATTTTCATCGGACTCCTATTATGTACGCACGCTTGATCCTTCAGTTATTTGATTGATCTGATTTATCATTATGTAAAAACAGAAGAGAATAGATTCTTTAATATATTGGACAAGATATTCTGCAAAGGTGTTTCTAAACTACTACTAATACTTGATGTTGTTTGTGTCAATTTTTTTTTTCCAATGATTAAGTTCACTTTTTTCTTATTTTCAATTTAATTTTTTCTCTAATCTTTTCGGCCTAATTTGTGATTAACTTAGCTTGTTTATAGGCCTAATTAACGTTCCTACCAAGTGAGAATGTCTGTCTATCTTCACGTTCTTGTTACCATCTTGTAGGACCCAGAGAAGGCAACATTTAATTGCTACTCTGTGAATGGTGAAGATCAAATGGACATGATAGTTGAGCGTGAATGCAATGCCTTTGAGGTTATTTCTGTTACATTGATACATCTAGCTTCTTCATTTTTTATTTCACATGTTCTTTATTCAATTAAAATCAATTATAAGTAAGTTTCCATGCAGCGTGCAATTCAATGATGCTTACTTATACTGCATGGTTCCATTTTCTGTTTCAATCTTTGCTTGACATTGTAGTAATGACGAGCTATCAATATATATGGTTTGACTAATTCTAGACTTAGGGTGATTTGGATGGCTAATCTTGGTCCGTTATCAAACATCGTGGAGTCTGTTCTCTGCTACCGGTAAACTGCTAGGGTAGTCGACCTAACTCTAATAGCATCACAATGTGAAGGTGATACAAGAGGGAGCGACTCTCGTGTCTGCTAACCCTATGTGAGACTATTAGGGTTAGACCGACTAGCCAAATAGCTTATCTGTAGTAAAGAACAAATTCCATGAGATTTGATAGTGGACTAGAATTAGGAATTGATACACTAAGATTAGAACCTAAAGTTTACAGTCATCAACTATTTACGAGACTGTTTATACTCCTTCCAGGTATTGGAACTTGATAGCCAGATTGAGAAGAACGAAAGAACTCTAAAATCTCTGCAGGAACTAGATGAGATATTTAAAAGGTAATATGTGTTTCAAGATATGAATTGTTTGTATCTAGTATTGATGCTTCTCTCTCCTTTCCTCCCTTAATCTTTCTCACTCTTTCTCTCTAGTTTGGATGTTATCGAACAGGTCGAGGACACAATTGGTGGTCTGAAGGTCATTGATGTCACTGATAATTTCGTTAGAGTATCATTACATTCACATATTCCAAACTTGGAAGAGTTTTCAAGCTTACAGAGACTTGAAGGTATGATTGAGCCATCCGAATTGGATCATGAGTTGCTGATAGAAGTTTTGGAGGGGACAATGGAGTTAACGAATGCTGAGGTATCCCTTTATTTCGTTAAAGTACCATGACTTATTGTATCCACGGTTATTATTTGAATTCAAAATCTGAGTAATTCCATCTATTGGCACCTCTGCCTCTCTTATTTATGTAAATTTTGTTGAAGGAGCGTAATTAATTAGTTATATTTGCACAGATCTTTCCCGGTGATGTCCATTTGCATGATATCATCAACGCTTCAAAGTCCTTCAGGTATGTTCCTATAAGATGTTAGAAACCACGACTTTCCACAAGGGTATGATATTGTCCACTTTGAACATAAACTTTCATGGCTTTACTTTTGGTTTCCCTAAAAAGTCATGTCAATGTTGATGTATTCCTTATTTATAAGCTCATGATCATCCCCTTAATTAGCCGATGTGGTACTCCTTACCAACAATTCTCAACACAAGATCCCTGGCTCCACTATAGTCAAGAAGAATCGGGAGGATGGTGGCTGTTTTTTTAATTAGACCTTGATCGTTACCCTTATAGGAGTGGAATCCAGTTCGTCTGATAAAAAGGGAAAGCTGAACCAAAACAAACCATTAATGATAATAGAGTTGACTGCTACACCAAACTGCTAGAACTCTAACCTAATTGAAATTAGTTCGGTTTTAGAATTTCTGAACACATCTCCTGTCCAATTTTCCCTTAACTCACCAAACGGTCTCATAATTGTTCAGTTCAGTTGGTTTGATTAGTTCCTTTAGGTTCTAACTTCTTCCCTCAGGCAGCTATGCCATAGTTGATTGGAAATAGTATGCAAATATGTCGTGGAATATTATATTTGTTTCAATTTTCACCCGACAATTAGATTGTTTCTTTATTTCACTTCACCTCTACCGAAGGCAGTACATCTTACAATAAAGTCATAATCCAATTGGGGCTATTTGGTACAAAAATCTGTTTCGTAACTCGGAGCCTACTAAGGCGGTGATTAAAAAAAAAAATTTGCCAGACGCTTTGGGTAGCTAGGAACTAGAATCCTGGTCCTTCTTTAAGGATGTAATTTAAGTAGGCTTATATGCCGCAGAGGTTCTCTTAATATTTGTCATAAAATTTAGCTTAAAGCTTTGCTTTGGGCATCTGTTAAAAACAACCCCCTTTTTATGCATGTTATATCCTTTTTTCATATATCTGGTACTGGAATATAGCACACAACGATGTTACGTACTTATAGTCTTATTCCTTGCCATATCCTTGCCAAATATTGATTTGATATTTGGAGGATGAAAAAGCCTTCTTCTCATAGTTGTTAAATTTCAAATTAGAGCTACCTGTTTTATTAGCGTGCGTTATACAACTTTCACCAATCATATTGGTTTGCTGGAATCGTATATGAAGCTATTTGTGTGATGTCTCACATTAGTTGGGGAGGAGAACAAAACACCATTTATTAGGGCGTGGAAACCTTCCTCTAGCAGACGCTTTTTAAAGCTTTGAGAGGAAGCCCGAAAGGGAAAGCCCTAAGAAGACAATATCTGCTAGTGGTGGGCTTAGGGTCGTTACAATTTGAGTTTAATTGCAATGACACGATGGATAATATGCAACATTTTTTTTTAATAATAAATATCATAGGGTGACAAAGCCTCCATTTATCCGTCATTGTAATGATTTGGCTACAATTCTGACCGAGTTTTTCACTTGTGGAATAGGAAAGCAATTTCTCTGATCCATACATTGTTTTTGAATGAGCAGCAATTCTTCATTGGAATGGTTTGTGAGAAAAGTACAAGATAGGATTGTTTTATGTGCTCTTAGGCGATTTGTTGTAAAAAGTGCAAACAAATCGAGGTGAGACTCTTAAACTTTTCAGACTTATTGTATGATTAAAAATAATGCAGAACAAAGGAATTTTTTTTTTCTTCTTCTTCTTGCATAGAACTCCGATTTCCAAACCGAAATTCCCCAGTAAAATTATGTAATAATATGTAATAGTAATTTTTGAGTCTGAAGTAATTACTCTCATTGCAGTCATTCCTTCGAGTATTTAGATCAAGACGAAACGATAATATGTACTATGATTGGAGGAATTGATGCAGTCATTAAGGTGTCTCAAGGTTGGCCATTGTCGGATTCTCCTTTGAAACTCATATCTCTCAAGAGCTCAGACCATTATATAAAAGGAGTTTCTTTAAGCCTCATTTGCAAGGTGGAGGTAAGATGGCCCCCTATTTCCCTTCTAGTTTTTTAGTTTCTATTCATCTCTCTTTGATACCTGAAAAGCTAACTTGATCTAGTTAGTTTTAGCTTAATATATGATCTAGTCCCCTGCTATGAGTATATTTTTCAATTTAGTTTCGACTATTCAAAATGTTTCAATTTAATCCATTATGTTTCACTATTTTTTAATTTAATTATTGATGATAAACTTATGTGGCATAATACTTGGTGAATTGACGGAAATTTAGATTGGTTAATGATAAGCTTATATGGCATAGTACTAAGTGATTAGACGAAAATTTAGGGAAAAAAAATCATTTAAGAGAAGAAAGCTCAAAATTTCTTCAACTTAGTTTATCATTTAAGAGAATAATCTTTTTTTTCTTTTGAATTTCTGCGAACTAGTTTATCATCTACTAATTTTAATGTTTTTGGATTAAATTGAAACTATTTAAACAATAGAGACTTAATTGAAAAAGATTAAAAAAAGACACTTGGGGATCTAGAACATATATGAGATATTTACCCAACCACTTAGGTTCTTATGGTTGTCATTAGGGTGTTGTTATACATGCATGCATTTTCATCCTCTGATTGTGTTGACATCCTTCAGAAAATGGCAAATTCCTTGGACGTTGGTCTTCGACACAATCTATCAAGCTTTGCAGATGCTGTTGAAAAGATAATGAAGGAGCAAATGCACTTAGAACTCCAATTTGACAGTGCTTTATGATGATCTTATTGGATATTTCAAATTTACAATCACGCCAATTGAACACAACGAGATCCTATATCAGGTATGCAAACTGAACATCTATCTACTAATACAAGTGCCCAGTAACTGATCATTTTTCATGCTGAAAATTTTCGCTGGACTGCTCATTGCTATAATATATATATTCCTTTTGTTTGTATAGATTAAAGACTTTGTTGCTCTGTTGATAACATCATCATTATTATTATTGATAATTAGATTCTTTGTATCTTGCTCATAGCCGTCCCAAAATTATCTAGAGAATGTTAGGAATCTCAAACCTCCATAATGCTATGATATTATCCACTTTGAGCATAAATCACGAACCTCCACAACAGTATGATATTGTCCACAATGGTATCATATATATTCCTTTTAAATGTTAGAAATCACGAGATCATTATAATTTACCAATTTTATTAAGTTTTGAATCTAAGGCTTTGAATTTGGGATCTTAGAAAACCAACCGAACAAAAATTCAACCGATTGAGATATTATACATTTATTCTAGCCTGGCCTAGGAGCTTGGAAGATAGATAGTATCCAAACAATTCAAGTTGATACCAATAAATGGGAAAATCTAGGAACTTGAGGGACATCTCATTTGTATCATTGTCCGTATCAACAATAATCAAATTACTCGCAATTAAAAAAAAAAATCTGTCAAAACAATTACAATTAATGAATCAGCAAAACCAAAACTAAATGTTGGAGAGAGAGAGAGAGAGAAATCTAGAAAACCTCAAACCTAGGTGTAAGCCAGTTTGTGTAGAAATTTGAATTGTATCCTCAAATGTTAGCTCTCGTAAGTTCCTTCCTTCTATCGATGAAAAAAAACTATGAAATTTGAATTTTGTACCTCATATAGATGATGAAAAAGCCAAAGCCAAAGCCAAAGCCAGTCTCCCTTGAACTTCATTTTGCCTTTTTGCAAATGGGCCCATCTTGTTTGCTTCTTCCAATAAATTGTACCCTCGCCATGGTTCCTGGACTGGAGTGGCCTGTGATCATCTGCTTTTAAGTTTTGTTTTGTTTATTCTGGTGCTAGGTAGTTAGAATTTGTGGTTGTACTAATAATAAGTCATTTGGGGGACCTAGAGACAATGGGGACCTCGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGGAGAACTCCCCATGTCCCTGGTTTTATGTAGGAGAAAAGTTCCAGAAAGAATGGTAACAAAACCGCATAATTCGGTTGCGATTTGTGATGCATTTTGTGAATCCCATTCCTGTAAGTAAAATTAAACCAGACCAGAGAGAAGGAAAATAAATAAAAATAAAGGATTAGGAGAGGGAGAAAACAAAACAGACTTCACCATAGAAAGTTATTAGCTCTATTAACTACTGAGTGTACTATATATATTTGTGTGTGTATATATATATATAAAGCCTCATCTACCCCTCTACTTAAACTAAGGATCAAGAGTAGCTGCACATGGAATATAAAAATAAAATTAAAAAAAAAAAAAACGGTTAATTTCTTTTTAAAACAAAAATTAGTCCTGTAGTTTTAGAAAAATAGAATTTGTTCTTATGATTTGATAAATAAAACTTCACAAGGTTAATTATCTGTGTGCCACTAAGGTGACCTTTAATATTTTGGCTCATTGTGTGTGGGTTAGGTTGTGTCGTAGGGCTTTATTAAGCTATAGAGATCAAATTCTATCTTTTAAAATTATAAAAACTAGATTTTTGTTTTTCCCCACAATCGATAGATATTTTCTATTTGGTTGATTGTGTGGACTCGGTAGCTTAATGGATAAACTACAAATGAAATGATGTAGGTAGTCTTAAATTTTAGAATTTTTTAGAAGTTCTATCAAATTTAGAAATCTATTCAATATAAAATTTAAATTTATATATAATAAATAAATAAATTTTCAGAAATTAAGATTTTAATTTAACTGCCAATATATCCATATTTTCGAGTATAAATATAGACATGGTGCAAGTGCTGATCAATGTAAAAGTCTAAATGGCAAGGTTTTAAGTGGAAAAAAA

mRNA sequence

AAACGGGACCGGTCCCGCGTGCGAGGAATCTCGTTCGGATTCTGTGCAAATTCCGGCAGAGGTAAAGGAGAAAATAATGGCAGAATTGATGGAAGCTACTCCGTCTGTGTCTCCAAGCGTCGATGTCCAAGCAGTTCGCAGTTGCATAAGCGAGATAGAAGAGTTGCAGAGATCTTTGGAGGAAGATGAAGCTTATACGACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAGTGTTCTCTCCTTCTCGAGAGCAGACTACAGCAGACTCTGTCAGAATGGTCTAACGTAGATAGTTTCTTGGGGATTGATGATTTAGACGCATATGTTGAACGTATGAAAGAGGAACTTATCGCGGTGGAAGCTGAAAGCAGCAAAATCTCCAGTGAGATCGAGGTTCTTAAGAGAACCAGTATAGAAGATTCGAATAAATTGAGGATGGATCTTGAAGTATTAAAATTGTCGTTAGATCGTTGTGCATCACAGGACCCAGAGAAGGCAACATTTAATTGCTACTCTGTGAATGGTGAAGATCAAATGGACATGATAGTTGAGCGTGAATGCAATGCCTTTGAGGTATTGGAACTTGATAGCCAGATTGAGAAGAACGAAAGAACTCTAAAATCTCTGCAGGAACTAGATGAGATATTTAAAAGTTTGGATGTTATCGAACAGGTCGAGGACACAATTGGTGGTCTGAAGGTCATTGATGTCACTGATAATTTCGTTAGAGTATCATTACATTCACATATTCCAAACTTGGAAGAGTTTTCAAGCTTACAGAGACTTGAAGGTATGATTGAGCCATCCGAATTGGATCATGAGTTGCTGATAGAAGTTTTGGAGGGGACAATGGACAATTCTTCATTGGAATGGTTTGTGAGAAAAGTACAAGATAGGATTGTTTTATGTGCTCTTAGGCGATTTGTTGTAAAAAGTGCAAACAAATCGAGTCATTCCTTCGAGTATTTAGATCAAGACGAAACGATAATATGTACTATGATTGGAGGAATTGATGCAGTCATTAAGGTGTCTCAAGGTTGGCCATTGTCGGATTCTCCTTTGAAACTCATATCTCTCAAGAGCTCAGACCATTATATAAAAGGAGTTTCTTTAAGCCTCATTTGCAAGGTGGAGAAAATGGCAAATTCCTTGGACGTTGGTCTTCGACACAATCTATCAAGCTTTGCAGATGCTGTTGAAAAGATAATGAAGGAGCAAATGCACTTAGAACTCCAATTTGACAGTGCTTTATGATGATCTTATTGGATATTTCAAATTTACAATCACGCCAATTGAACACAACGAGATCCTATATCAGGTATGCAAACTGAACATCTATCTACTAATACAAGTGCCCAGTAACTGATCATTTTTCATGCTGAAAATTTTCGCTGGACTGCTCATTGCTATAATATATATATTCCTTTTGTTTGTATAGATTAAAGACTTTGTTGCTCTGTTGATAACATCATCATTATTATTATTGATAATTAGATTCTTTGTATCTTGCTCATAGCCGTCCCAAAATTATCTAGAGAATGTTAGGAATCTCAAACCTCCATAATGCTATGATATTATCCACTTTGAGCATAAATCACGAACCTCCACAACAGTATGATATTGTCCACAATGGTATCATATATATTCCTTTTAAATGTTAGAAATCACGAGATCATTATAATTTACCAATTTTATTAAGTTTTGAATCTAAGGCTTTGAATTTGGGATCTTAGAAAACCAACCGAACAAAAATTCAACCGATTGAGATATTATACATTTATTCTAGCCTGGCCTAGGAGCTTGGAAGATAGATAGTATCCAAACAATTCAAGTTGATACCAATAAATGGGAAAATCTAGGAACTTGAGGGACATCTCATTTGTATCATTGTCCGTATCAACAATAATCAAATTACTCGCAATTAAAAAAAAAAATCTGTCAAAACAATTACAATTAATGAATCAGCAAAACCAAAACTAAATGTTGGAGAGAGAGAGAGAGAGAAATCTAGAAAACCTCAAACCTAGGTGTAAGCCAGTTTGTGTAGAAATTTGAATTGTATCCTCAAATGTTAGCTCTCGTAAGTTCCTTCCTTCTATCGATGAAAAAAAACTATGAAATTTGAATTTTGTACCTCATATAGATGATGAAAAAGCCAAAGCCAAAGCCAAAGCCAGTCTCCCTTGAACTTCATTTTGCCTTTTTGCAAATGGGCCCATCTTGTTTGCTTCTTCCAATAAATTGTACCCTCGCCATGGTTCCTGGACTGGAGTGGCCTGTGATCATCTGCTTTTAAGTTTTGTTTTGTTTATTCTGGTGCTAGGTAGTTAGAATTTGTGGTTGTACTAATAATAAGTCATTTGGGGGACCTAGAGACAATGGGGACCTCGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAGGGAGAACTCCCCATGTCCCTGGTTTTATGTAGGAGAAAAGTTCCAGAAAGAATGGTAACAAAACCGCATAATTCGGTTGCGATTTGTGATGCATTTTGTGAATCCCATTCCTGTAAGTAAAATTAAACCAGACCAGAGAGAAGGAAAATAAATAAAAATAAAGGATTAGGAGAGGGAGAAAACAAAACAGACTTCACCATAGAAAGTTATTAGCTCTATTAACTACTGAGTGTACTATATATATTTGTGTGTGTATATATATATATAAAGCCTCATCTACCCCTCTACTTAAACTAAGGATCAAGAGTAGCTGCACATGGAATATAAAAATAAAATTAAAAAAAAAAAAAACGGTTAATTTCTTTTTAAAACAAAAATTAGTCCTGTAGTTTTAGAAAAATAGAATTTGTTCTTATGATTTGATAAATAAAACTTCACAAGGTTAATTATCTGTGTGCCACTAAGGTGACCTTTAATATTTTGGCTCATTGTGTGTGGGTTAGGTTGTGTCGTAGGGCTTTATTAAGCTATAGAGATCAAATTCTATCTTTTAAAATTATAAAAACTAGATTTTTGTTTTTCCCCACAATCGATAGATATTTTCTATTTGGTTGATTGTGTGGACTCGGTAGCTTAATGGATAAACTACAAATGAAATGATGTAGGTAGTCTTAAATTTTAGAATTTTTTAGAAGTTCTATCAAATTTAGAAATCTATTCAATATAAAATTTAAATTTATATATAATAAATAAATAAATTTTCAGAAATTAAGATTTTAATTTAACTGCCAATATATCCATATTTTCGAGTATAAATATAGACATGGTGCAAGTGCTGATCAATGTAAAAGTCTAAATGGCAAGGTTTTAAGTGGAAAAAAA

Coding sequence (CDS)

ATGGCAGAATTGATGGAAGCTACTCCGTCTGTGTCTCCAAGCGTCGATGTCCAAGCAGTTCGCAGTTGCATAAGCGAGATAGAAGAGTTGCAGAGATCTTTGGAGGAAGATGAAGCTTATACGACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAGTGTTCTCTCCTTCTCGAGAGCAGACTACAGCAGACTCTGTCAGAATGGTCTAACGTAGATAGTTTCTTGGGGATTGATGATTTAGACGCATATGTTGAACGTATGAAAGAGGAACTTATCGCGGTGGAAGCTGAAAGCAGCAAAATCTCCAGTGAGATCGAGGTTCTTAAGAGAACCAGTATAGAAGATTCGAATAAATTGAGGATGGATCTTGAAGTATTAAAATTGTCGTTAGATCGTTGTGCATCACAGGACCCAGAGAAGGCAACATTTAATTGCTACTCTGTGAATGGTGAAGATCAAATGGACATGATAGTTGAGCGTGAATGCAATGCCTTTGAGGTATTGGAACTTGATAGCCAGATTGAGAAGAACGAAAGAACTCTAAAATCTCTGCAGGAACTAGATGAGATATTTAAAAGTTTGGATGTTATCGAACAGGTCGAGGACACAATTGGTGGTCTGAAGGTCATTGATGTCACTGATAATTTCGTTAGAGTATCATTACATTCACATATTCCAAACTTGGAAGAGTTTTCAAGCTTACAGAGACTTGAAGGTATGATTGAGCCATCCGAATTGGATCATGAGTTGCTGATAGAAGTTTTGGAGGGGACAATGGACAATTCTTCATTGGAATGGTTTGTGAGAAAAGTACAAGATAGGATTGTTTTATGTGCTCTTAGGCGATTTGTTGTAAAAAGTGCAAACAAATCGAGTCATTCCTTCGAGTATTTAGATCAAGACGAAACGATAATATGTACTATGATTGGAGGAATTGATGCAGTCATTAAGGTGTCTCAAGGTTGGCCATTGTCGGATTCTCCTTTGAAACTCATATCTCTCAAGAGCTCAGACCATTATATAAAAGGAGTTTCTTTAAGCCTCATTTGCAAGGTGGAGAAAATGGCAAATTCCTTGGACGTTGGTCTTCGACACAATCTATCAAGCTTTGCAGATGCTGTTGAAAAGATAATGAAGGAGCAAATGCACTTAGAACTCCAATTTGACAGTGCTTTATGA

Protein sequence

MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKLRMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMDNSSLEWFVRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQFDSAL

Homology

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BLAST of Cp4.1LG08g02690 vs. TrEMBL
Match: A0A0A0L6Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129760 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 7.7e-170
Identity = 324/415 (78.07%), Postives = 360/415 (86.75%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           M E MEATPSV PS+D+QAVRS   E+EELQRSLEE+E  TTDSLGSEKLL+EC+L LES
Sbjct: 2   MPESMEATPSVPPSLDLQAVRS---ELEELQRSLEENEESTTDSLGSEKLLRECALHLES 61

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           R+QQ LSE+SNVDSFLGIDDLDAYVE MKEEL+AVEAESSKIS+EIEVLKRT+IEDSNKL
Sbjct: 62  RIQQVLSEYSNVDSFLGIDDLDAYVEHMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNER 180
           +MDLEVLKLSLDR  SQDPE+ATFNC S+NGED M++IV RECNAFEVLEL+SQIEKN++
Sbjct: 122 KMDLEVLKLSLDRFPSQDPEEATFNCSSMNGEDPMNVIVNRECNAFEVLELESQIEKNKK 181

Query: 181 TLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEG 240
            LKSLQE+DEIFKSLDVIEQVE TIGG+KVIDV DN +R+SLH+HIPN+E+FS+LQRLEG
Sbjct: 182 ILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEG 241

Query: 241 MIEPSELDHELLIEVLEGTMD------------------------NSSLEWFVRKVQDRI 300
           +IE SELDHEL+IEVL+GTM+                        NSSLEWFVRKVQDRI
Sbjct: 242 LIEKSELDHELIIEVLDGTMELKNAEIFPADVHLHDIINASKSISNSSLEWFVRKVQDRI 301

Query: 301 VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLK 360
           VLC LRRF VKSANKS HSFEYLDQDE I+C+MIGGIDA IKVSQGWPL+DSPLKLISLK
Sbjct: 302 VLCTLRRFAVKSANKSCHSFEYLDQDEMIMCSMIGGIDACIKVSQGWPLADSPLKLISLK 361

Query: 361 SSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQFDS 392
           SSDHY KGVSLSLICKVEKMANSLD  +R NLSSFADAVEKI+KEQMHLELQ DS
Sbjct: 362 SSDHYTKGVSLSLICKVEKMANSLDAHIRRNLSSFADAVEKILKEQMHLELQADS 413

[Close]

BLAST of Cp4.1LG08g02690 vs. TrEMBL
Match: A0A0B0NXP0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07973 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.0e-97
Identity = 212/428 (49.53%), Postives = 287/428 (67.06%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           MAE ME + S S S+++Q++RS ++++ E+  S + D      S  SEKLLK+CS   +S
Sbjct: 1   MAEPMEISSS-SESLNLQSIRSRMNDLSEIHNSNKNDVGTEALSSDSEKLLKDCSFHFQS 60

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           +++Q + E+S+V  FLGI+DLD Y+  +KEEL  VEAES+KIS+EIE L R  IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDKYLAYLKEELNQVEAESAKISNEIEDLSRNHIEESNML 120

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNC-YSVNGEDQMDMIVERECNAFEVLELDSQIEKNE 180
             +LE LK +LD  ASQ+ E+       S+NGE+Q++++   E   FE+LEL+SQIEKN 
Sbjct: 121 EDNLEGLKCALDSIASQEREEEDPGFGSSMNGENQLNVLDANEGQKFEILELESQIEKNN 180

Query: 181 RTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLE 240
             LKSLQ+LD  FK LD +EQ+ED + GLKVI    N +R+SL ++IP +E       +E
Sbjct: 181 LILKSLQDLDSTFKRLDALEQIEDALTGLKVIGFDGNCIRLSLQTYIPKVEGVLCQNMIE 240

Query: 241 GMIEPSELDHELLIEVLEGTMDNSSLEWF------------------------------- 300
            + EPSE++HELL+E+++G M+  ++E F                               
Sbjct: 241 DISEPSEMNHELLVEIVDGIMEVKNVEMFPNDVYIGDIVDAAKSFRQLFANLVAPETRSS 300

Query: 301 ----VRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWP 360
               V KVQDRI+L  LRRF VKS NKS H FEYL++DETII  + GGIDA IKVSQGWP
Sbjct: 301 LEWLVGKVQDRIILSTLRRFAVKSTNKSRHCFEYLERDETIIAHLAGGIDAFIKVSQGWP 360

Query: 361 LSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMH 393
           LS SPLKL+S+KSSDH+ +G+SLSL+CKVE+MANSLD+ +R NLS+F D VEK++ EQM 
Sbjct: 361 LSKSPLKLLSVKSSDHHSRGISLSLLCKVEEMANSLDMNIRLNLSTFVDTVEKLLLEQMR 420

[Close]

BLAST of Cp4.1LG08g02690 vs. TrEMBL
Match: A0A0D2TX39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G350500 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.5e-96
Identity = 212/429 (49.42%), Postives = 289/429 (67.37%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           MAE ME + S S S+++Q++RS ++++ E+  S + D      S  SEKLLK+CS   +S
Sbjct: 1   MAEPMEISFS-SGSLNLQSIRSRMNDLSEIHNSNKNDVGTEALSSDSEKLLKDCSFHFQS 60

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           +++Q + E+S+V  FLGI+DLD Y+  +KEEL  VEAES+KIS+EIE L R  IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDKYLAYLKEELNQVEAESAKISNEIEDLSRNHIEESNML 120

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNCY--SVNGEDQMDMIVERECNAFEVLELDSQIEKN 180
             +LE L+ +LD  ASQ+ E+    C+  S+NGE+Q++++   E   FE+LEL+SQIEKN
Sbjct: 121 EDNLEGLECALDSIASQEREEED-PCFDSSMNGENQLNLLDANEGQKFEILELESQIEKN 180

Query: 181 ERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRL 240
              LKSLQ+LD  F+ LD +EQ+ED + GLKVI    N +R+SL ++IP +E        
Sbjct: 181 NLILKSLQDLDSTFRRLDALEQIEDALTGLKVIGFDGNCIRLSLQTYIPKVEGVLCQNMS 240

Query: 241 EGMIEPSELDHELLIEVLEGTMDNSSLEWF------------------------------ 300
           E + EPSE++HELL+E+++G M+  ++E F                              
Sbjct: 241 EDISEPSEMNHELLVEIVDGIMEVKNVEMFPNDVYIGDIVDAAKSFRQLFSNLVAPEIRS 300

Query: 301 -----VRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGW 360
                V KVQDRI+L  LRRF VKS NKS H FEYL++DETII  + GGIDA IKVSQGW
Sbjct: 301 SLEWLVGKVQDRIILSTLRRFAVKSTNKSRHCFEYLERDETIIAHLAGGIDAFIKVSQGW 360

Query: 361 PLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQM 393
           PLS SPLKL+S+KSSDH+ +G+SLSL+CKVE+MANSLD+ +R NLS+F DAVEK++ EQM
Sbjct: 361 PLSKSPLKLLSVKSSDHHSRGISLSLLCKVEEMANSLDMNIRLNLSTFVDAVEKLLLEQM 420

[Close]

BLAST of Cp4.1LG08g02690 vs. TrEMBL
Match: A0A061EKN9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020266 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.8e-92
Identity = 206/430 (47.91%), Postives = 285/430 (66.28%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           MAE ME + S S ++D+ ++RS I+E+ E+ R  +  +     SL SEKLLK+CSL  ES
Sbjct: 1   MAEPMEISSS-SEALDLHSIRSRINELSEIHRIDKNKDEGEALSLNSEKLLKDCSLHFES 60

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           +++Q + E+S+V  FLGI+DLD Y+  +KEEL  VEAES+KIS+EIE L R  IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDEYLAHLKEELNQVEAESAKISNEIEDLSRNHIEESNIL 120

Query: 121 RMDLEVLKLSLDRCASQDPEKATFN-CY--SVNGEDQMDMIVERECNAFEVLELDSQIEK 180
             +LE LK +LD  ASQ  E    + C   S+N EDQ +++   E   FE++EL+SQIEK
Sbjct: 121 EGNLEGLKYALDSIASQGMEGVEEDPCLDSSMNDEDQSNLMHSNEEQKFEIMELESQIEK 180

Query: 181 NERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQR 240
           N   LKSLQ+LD +FK LD +EQ+ED + GLKVI    N +R+SL ++IP LE     + 
Sbjct: 181 NNIILKSLQDLDSMFKRLDTLEQIEDALTGLKVIGFDGNCIRLSLQTYIPKLEGLLCQKT 240

Query: 241 LEGMIEPSELDHELLIEVLEGTMDNSSLEWFVRKVQDRIVLCALRRF------------- 300
           +E + EPSE++HELL+E+++GTM+  ++E F   V    ++ A + F             
Sbjct: 241 IEDISEPSEMNHELLVEIVDGTMEIKNVEMFPNDVYLGDIIDAAKSFRQLSSNLTVQQTQ 300

Query: 301 -------------VV---------KSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQG 360
                        ++         KS NKS HSFEYL++DETI+  ++GGIDA IK+SQG
Sbjct: 301 SSLEWFVGKVQDRIILSTLRRFIVKSTNKSRHSFEYLERDETIVAHLVGGIDAFIKLSQG 360

Query: 361 WPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQ 393
           WPLS SPLKL+S+KSSDH+ +G+SLSL+CK E+MANSLD+ +R NLS+F DAVEK++ EQ
Sbjct: 361 WPLSKSPLKLLSIKSSDHHSRGISLSLLCKAEEMANSLDMHIRQNLSAFVDAVEKLLLEQ 420

[Close]

BLAST of Cp4.1LG08g02690 vs. TrEMBL
Match: A0A067KT01_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01098 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 8.5e-92
Identity = 202/419 (48.21%), Postives = 276/419 (65.87%), Query Frame = 1


Query: 8   TPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLS 67
           T S S S+D+ ++RS I E+EE+  +  ED      S  S +LLK+C+L LES++QQ +S
Sbjct: 3   TISSSESIDLDSLRSGIRELEEIHSNCNEDIVCEISSSDSNQLLKDCALQLESKVQQIVS 62

Query: 68  EWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKLRMDLEVL 127
           E S+  SFLGI+DLDA+VE +KEEL   EAES+KISSEIEVL R  +EDS +L  D+E+L
Sbjct: 63  ECSDF-SFLGIEDLDAFVEHLKEELNTAEAESAKISSEIEVLTRNHMEDSVQLENDIELL 122

Query: 128 KLSLDRCASQDPEKATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNERTLKSLQE 187
           K SLD  A QD EK   +    +  +  + + E E   FE+LEL +QIE+++  LK+LQ+
Sbjct: 123 KCSLDFAALQDMEKEKEHACGEDISNSTNKLGEYE---FEILELHNQIEESKVILKNLQD 182

Query: 188 LDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEGMIEPSEL 247
            D  FK LD IEQ+EDT+ GLKVID     +R+SL +++P LEE    Q++E   EPSE+
Sbjct: 183 FDSTFKRLDTIEQIEDTMSGLKVIDFDGTSIRLSLRTYLPKLEELLCQQKIEVTAEPSEV 242

Query: 248 DHELLIEVLEGTMDNSSLEW-----FVRKVQD---------------------------- 307
           +H+LLIEV+ GTM+  ++E      F+  + D                            
Sbjct: 243 NHDLLIEVVNGTMELKNVEMFPNDVFIGDIIDAAKSFRQFSHSSFVETRSSLEWFVRKVQ 302

Query: 308 -RIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLI 367
            RI+ C LRR VVK+ANKS HSFEYLD+DE ++  ++GG+DA I + QGWPLS SPLKL+
Sbjct: 303 DRIIQCTLRRLVVKNANKSRHSFEYLDRDEIVVAHLVGGVDAFIMLCQGWPLSKSPLKLM 362

Query: 368 SLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQFDSA 393
           SLKSSD++ K +SLS +CKVE++ NSLD+ +R NL SF DA+EK++ EQM L+L  DSA
Sbjct: 363 SLKSSDNHSKEISLSFLCKVEEVVNSLDIHMRLNLLSFVDAIEKLLMEQMRLQLHSDSA 417

[Close]

BLAST of Cp4.1LG08g02690 vs. TAIR10
Match: AT3G23910.1 (AT3G23910.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2))

HSP 1 Score: 171.8 bits (434), Expect = 8.5e-43
Identity = 132/410 (32.20%), Postives = 221/410 (53.90%), Query Frame = 1


Query: 14  SVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVD 73
           S+D+Q +R  + E++   R+  E+   +  S     ++++  L  E ++++ + E+ +VD
Sbjct: 9   SLDLQEIRRRVKELDFFPRNCREEPVESCSSDYETLVVQDFVLQFEPKVKEIVEEYGDVD 68

Query: 74  SFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKLRMDLEVLKLSLDR 133
             L ++D DAY+E ++ EL +VEAES+K+S EIE L ++  +DS++L+ DLE L LSLD 
Sbjct: 69  -LLDVEDSDAYLEYLRNELQSVEAESAKVSEEIERLSQSHAQDSSRLQRDLEGLLLSLDS 128

Query: 134 CASQDPEKATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNERTLKSLQELDEIFK 193
            +SQD EK+  N  S +  +  ++I +   + F++ EL++Q+E+    LKSL++LD + K
Sbjct: 129 MSSQDVEKSKENQPSSSSMEVCEVIDD---DKFKMFELENQMEEKRMILKSLEDLDSLRK 188

Query: 194 SLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEGMIEPSELDHELLI 253
             D  EQVED + GLKV++   NF+R+ L ++I  L+ F    + + + EPSEL HELLI
Sbjct: 189 RFDAAEQVEDALTGLKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLI 248

Query: 254 EVLEGTMDNSSLEWFVRKVQDRIVLCA---LRRFVVKSA---NKSSHSFEYLDQDETIIC 313
            + + T + +  E F   +    ++ A    R+  + SA    +SS  +      + II 
Sbjct: 249 YLKDKTTEITKFEMFPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDKIIS 308

Query: 314 TMIGG--IDAVIKVSQGWPLSDSPLKLIS---------LKSSDHY-IKGVSLSLIC---- 373
           T +    + +   +   +   D    +++         LK SD + +    L L      
Sbjct: 309 TTLRKYIVMSSKTIRYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASLKNS 368

Query: 374 -------------KVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQ 389
                        KVE++ANSLD+  R NLS F DA+EKI+ EQ   ELQ
Sbjct: 369 DNQSKGISLSLICKVEELANSLDLETRQNLSGFMDAIEKILVEQTREELQ 414

[Close]

BLAST of Cp4.1LG08g02690 vs. TAIR10
Match: AT3G24255.1 (AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein)

HSP 1 Score: 159.5 bits (402), Expect = 4.3e-39
Identity = 122/343 (35.57%), Postives = 188/343 (54.81%), Query Frame = 1


Query: 82  DAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKLRMDLEVLKLSLDRCASQDPEK 141
           DAY+E ++ EL +VEAES+K+S EIE L ++   DS++L+ DLE L LSLD  +SQD EK
Sbjct: 401 DAYLEYLRNELQSVEAESAKVSEEIERLSQSHALDSSRLQRDLEGLLLSLDSMSSQDVEK 460

Query: 142 ATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQV 201
           +  N  S +  +  ++I   + + F++ EL++Q+E+    LKSL++LD + K  D  EQV
Sbjct: 461 SKENQPSSSSMEVCEVI---DDDKFKMFELENQMEEKRMILKSLEDLDSLRKRFDAAEQV 520

Query: 202 EDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMD 261
           ED + GLKV++   NF+R+ L ++I  L+ F    + + + EPSEL HELLI + + T +
Sbjct: 521 EDALTGLKVLEFDGNFIRLQLRTYIQKLDGFLGQHKFDHITEPSELIHELLIYLKDKTTE 580

Query: 262 NSSLEWFVRKVQDRIVLCA---LRRFVVKSA---NKSSHSFEYLDQDETIICTMIGGIDA 321
            +  E F   +    ++ A    R+  + SA    +SS  +      + II T +   D 
Sbjct: 581 ITKFEMFPNDIYIGDIIEAADSFRQVRLHSAVLDTRSSVQWVVAKVQDKIISTTLRK-DF 640

Query: 322 VIK---VSQGWPLSDSPLKLIS---------LKSSDHY------------------IKGV 381
           V+    +   +   D    +++         LK SD +                   KG 
Sbjct: 641 VMSSKTIRYTFEYYDKDETIVAHIAGGIDAFLKVSDGWPLLNTPLKLASLKNSDNQSKGF 700

Query: 382 SLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQ 389
           SLSLI K+E++ANSLD+  R NLS F DAVEKI+ +Q   EL+
Sbjct: 701 SLSLISKLEELANSLDLETRQNLSGFMDAVEKILVQQTREELK 739

[Close]

BLAST of Cp4.1LG08g02690 vs. NCBI nr
Match: gi|449432396|ref|XP_004133985.1| (PREDICTED: uncharacterized protein LOC101211137 [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 1.1e-169
Identity = 324/415 (78.07%), Postives = 360/415 (86.75%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           M E MEATPSV PS+D+QAVRS   E+EELQRSLEE+E  TTDSLGSEKLL+EC+L LES
Sbjct: 2   MPESMEATPSVPPSLDLQAVRS---ELEELQRSLEENEESTTDSLGSEKLLRECALHLES 61

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           R+QQ LSE+SNVDSFLGIDDLDAYVE MKEEL+AVEAESSKIS+EIEVLKRT+IEDSNKL
Sbjct: 62  RIQQVLSEYSNVDSFLGIDDLDAYVEHMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNER 180
           +MDLEVLKLSLDR  SQDPE+ATFNC S+NGED M++IV RECNAFEVLEL+SQIEKN++
Sbjct: 122 KMDLEVLKLSLDRFPSQDPEEATFNCSSMNGEDPMNVIVNRECNAFEVLELESQIEKNKK 181

Query: 181 TLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEG 240
            LKSLQE+DEIFKSLDVIEQVE TIGG+KVIDV DN +R+SLH+HIPN+E+FS+LQRLEG
Sbjct: 182 ILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEG 241

Query: 241 MIEPSELDHELLIEVLEGTMD------------------------NSSLEWFVRKVQDRI 300
           +IE SELDHEL+IEVL+GTM+                        NSSLEWFVRKVQDRI
Sbjct: 242 LIEKSELDHELIIEVLDGTMELKNAEIFPADVHLHDIINASKSISNSSLEWFVRKVQDRI 301

Query: 301 VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLK 360
           VLC LRRF VKSANKS HSFEYLDQDE I+C+MIGGIDA IKVSQGWPL+DSPLKLISLK
Sbjct: 302 VLCTLRRFAVKSANKSCHSFEYLDQDEMIMCSMIGGIDACIKVSQGWPLADSPLKLISLK 361

Query: 361 SSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQFDS 392
           SSDHY KGVSLSLICKVEKMANSLD  +R NLSSFADAVEKI+KEQMHLELQ DS
Sbjct: 362 SSDHYTKGVSLSLICKVEKMANSLDAHIRRNLSSFADAVEKILKEQMHLELQADS 413

[Close]

BLAST of Cp4.1LG08g02690 vs. NCBI nr
Match: gi|659075804|ref|XP_008438339.1| (PREDICTED: uncharacterized protein LOC103483469 [Cucumis melo])

HSP 1 Score: 597.0 bits (1538), Expect = 2.3e-167
Identity = 319/415 (76.87%), Postives = 359/415 (86.51%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           M E +E TPSV PS+D+QAVRS   E+EELQRSLEE+E  + DSLGSEKLL+EC+L LES
Sbjct: 2   MLESIEVTPSVPPSLDLQAVRS---ELEELQRSLEENEDSSMDSLGSEKLLRECALHLES 61

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           R+QQ LSE+SNVDSFLGIDDLDAYVE MKEEL+AVEAESSKIS+EIEVLKRT+IEDSNKL
Sbjct: 62  RIQQVLSEYSNVDSFLGIDDLDAYVENMKEELVAVEAESSKISNEIEVLKRTNIEDSNKL 121

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMIVERECNAFEVLELDSQIEKNER 180
           +MDLEVLKLSLDR ASQDPE+ATFNC S+NGED+M++IV+RECNAFEVLEL+SQIEKN++
Sbjct: 122 KMDLEVLKLSLDRFASQDPEEATFNCSSMNGEDRMNVIVDRECNAFEVLELESQIEKNKK 181

Query: 181 TLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLEG 240
            LKSLQE+DEIFKSLDVIEQVE TIGG+KVIDV DN +R+SLH+HIPN+E+FS+LQRLEG
Sbjct: 182 ILKSLQEVDEIFKSLDVIEQVEGTIGGMKVIDVADNSIRLSLHTHIPNVEDFSTLQRLEG 241

Query: 241 MIEPSELDHELLIEVLEGTMD------------------------NSSLEWFVRKVQDRI 300
           +IE SE DHEL+IEV  GTM+                        NSSLEWFVRKVQDRI
Sbjct: 242 LIEKSESDHELIIEVSNGTMELKNAEIFPADVHLHDIINASKSISNSSLEWFVRKVQDRI 301

Query: 301 VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLK 360
           VLC LRRF VKSANKSSHSFEYLDQDE I+C+MIGGIDA IKVSQGWPL+DSPLKLISLK
Sbjct: 302 VLCTLRRFAVKSANKSSHSFEYLDQDEMIMCSMIGGIDACIKVSQGWPLADSPLKLISLK 361

Query: 361 SSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMHLELQFDS 392
           SSDHY KG+SLSLICKVEKMANSLD  +R NLSSFADAVEKI+KEQMHLELQ DS
Sbjct: 362 SSDHYTKGISLSLICKVEKMANSLDARIRQNLSSFADAVEKILKEQMHLELQADS 413

[Close]

BLAST of Cp4.1LG08g02690 vs. NCBI nr
Match: gi|728839810|gb|KHG19253.1| (Uncharacterized protein F383_07973 [Gossypium arboreum])

HSP 1 Score: 363.6 bits (932), Expect = 4.3e-97
Identity = 212/428 (49.53%), Postives = 287/428 (67.06%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           MAE ME + S S S+++Q++RS ++++ E+  S + D      S  SEKLLK+CS   +S
Sbjct: 1   MAEPMEISSS-SESLNLQSIRSRMNDLSEIHNSNKNDVGTEALSSDSEKLLKDCSFHFQS 60

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           +++Q + E+S+V  FLGI+DLD Y+  +KEEL  VEAES+KIS+EIE L R  IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDKYLAYLKEELNQVEAESAKISNEIEDLSRNHIEESNML 120

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNC-YSVNGEDQMDMIVERECNAFEVLELDSQIEKNE 180
             +LE LK +LD  ASQ+ E+       S+NGE+Q++++   E   FE+LEL+SQIEKN 
Sbjct: 121 EDNLEGLKCALDSIASQEREEEDPGFGSSMNGENQLNVLDANEGQKFEILELESQIEKNN 180

Query: 181 RTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRLE 240
             LKSLQ+LD  FK LD +EQ+ED + GLKVI    N +R+SL ++IP +E       +E
Sbjct: 181 LILKSLQDLDSTFKRLDALEQIEDALTGLKVIGFDGNCIRLSLQTYIPKVEGVLCQNMIE 240

Query: 241 GMIEPSELDHELLIEVLEGTMDNSSLEWF------------------------------- 300
            + EPSE++HELL+E+++G M+  ++E F                               
Sbjct: 241 DISEPSEMNHELLVEIVDGIMEVKNVEMFPNDVYIGDIVDAAKSFRQLFANLVAPETRSS 300

Query: 301 ----VRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWP 360
               V KVQDRI+L  LRRF VKS NKS H FEYL++DETII  + GGIDA IKVSQGWP
Sbjct: 301 LEWLVGKVQDRIILSTLRRFAVKSTNKSRHCFEYLERDETIIAHLAGGIDAFIKVSQGWP 360

Query: 361 LSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQMH 393
           LS SPLKL+S+KSSDH+ +G+SLSL+CKVE+MANSLD+ +R NLS+F D VEK++ EQM 
Sbjct: 361 LSKSPLKLLSVKSSDHHSRGISLSLLCKVEEMANSLDMNIRLNLSTFVDTVEKLLLEQMR 420

[Close]

BLAST of Cp4.1LG08g02690 vs. NCBI nr
Match: gi|823216592|ref|XP_012441000.1| (PREDICTED: uncharacterized protein LOC105766188 [Gossypium raimondii])

HSP 1 Score: 361.3 bits (926), Expect = 2.1e-96
Identity = 212/429 (49.42%), Postives = 289/429 (67.37%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           MAE ME + S S S+++Q++RS ++++ E+  S + D      S  SEKLLK+CS   +S
Sbjct: 1   MAEPMEISFS-SGSLNLQSIRSRMNDLSEIHNSNKNDVGTEALSSDSEKLLKDCSFHFQS 60

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           +++Q + E+S+V  FLGI+DLD Y+  +KEEL  VEAES+KIS+EIE L R  IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDKYLAYLKEELNQVEAESAKISNEIEDLSRNHIEESNML 120

Query: 121 RMDLEVLKLSLDRCASQDPEKATFNCY--SVNGEDQMDMIVERECNAFEVLELDSQIEKN 180
             +LE L+ +LD  ASQ+ E+    C+  S+NGE+Q++++   E   FE+LEL+SQIEKN
Sbjct: 121 EDNLEGLECALDSIASQEREEED-PCFDSSMNGENQLNLLDANEGQKFEILELESQIEKN 180

Query: 181 ERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQRL 240
              LKSLQ+LD  F+ LD +EQ+ED + GLKVI    N +R+SL ++IP +E        
Sbjct: 181 NLILKSLQDLDSTFRRLDALEQIEDALTGLKVIGFDGNCIRLSLQTYIPKVEGVLCQNMS 240

Query: 241 EGMIEPSELDHELLIEVLEGTMDNSSLEWF------------------------------ 300
           E + EPSE++HELL+E+++G M+  ++E F                              
Sbjct: 241 EDISEPSEMNHELLVEIVDGIMEVKNVEMFPNDVYIGDIVDAAKSFRQLFSNLVAPEIRS 300

Query: 301 -----VRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGW 360
                V KVQDRI+L  LRRF VKS NKS H FEYL++DETII  + GGIDA IKVSQGW
Sbjct: 301 SLEWLVGKVQDRIILSTLRRFAVKSTNKSRHCFEYLERDETIIAHLAGGIDAFIKVSQGW 360

Query: 361 PLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQM 393
           PLS SPLKL+S+KSSDH+ +G+SLSL+CKVE+MANSLD+ +R NLS+F DAVEK++ EQM
Sbjct: 361 PLSKSPLKLLSVKSSDHHSRGISLSLLCKVEEMANSLDMNIRLNLSTFVDAVEKLLLEQM 420

[Close]

BLAST of Cp4.1LG08g02690 vs. NCBI nr
Match: gi|590656424|ref|XP_007034267.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 346.7 bits (888), Expect = 5.4e-92
Identity = 206/430 (47.91%), Postives = 285/430 (66.28%), Query Frame = 1


Query: 1   MAELMEATPSVSPSVDVQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLES 60
           MAE ME + S S ++D+ ++RS I+E+ E+ R  +  +     SL SEKLLK+CSL  ES
Sbjct: 1   MAEPMEISSS-SEALDLHSIRSRINELSEIHRIDKNKDEGEALSLNSEKLLKDCSLHFES 60

Query: 61  RLQQTLSEWSNVDSFLGIDDLDAYVERMKEELIAVEAESSKISSEIEVLKRTSIEDSNKL 120
           +++Q + E+S+V  FLGI+DLD Y+  +KEEL  VEAES+KIS+EIE L R  IE+SN L
Sbjct: 61  KVKQIIEEYSDV-GFLGIEDLDEYLAHLKEELNQVEAESAKISNEIEDLSRNHIEESNIL 120

Query: 121 RMDLEVLKLSLDRCASQDPEKATFN-CY--SVNGEDQMDMIVERECNAFEVLELDSQIEK 180
             +LE LK +LD  ASQ  E    + C   S+N EDQ +++   E   FE++EL+SQIEK
Sbjct: 121 EGNLEGLKYALDSIASQGMEGVEEDPCLDSSMNDEDQSNLMHSNEEQKFEIMELESQIEK 180

Query: 181 NERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRVSLHSHIPNLEEFSSLQR 240
           N   LKSLQ+LD +FK LD +EQ+ED + GLKVI    N +R+SL ++IP LE     + 
Sbjct: 181 NNIILKSLQDLDSMFKRLDTLEQIEDALTGLKVIGFDGNCIRLSLQTYIPKLEGLLCQKT 240

Query: 241 LEGMIEPSELDHELLIEVLEGTMDNSSLEWFVRKVQDRIVLCALRRF------------- 300
           +E + EPSE++HELL+E+++GTM+  ++E F   V    ++ A + F             
Sbjct: 241 IEDISEPSEMNHELLVEIVDGTMEIKNVEMFPNDVYLGDIIDAAKSFRQLSSNLTVQQTQ 300

Query: 301 -------------VV---------KSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQG 360
                        ++         KS NKS HSFEYL++DETI+  ++GGIDA IK+SQG
Sbjct: 301 SSLEWFVGKVQDRIILSTLRRFIVKSTNKSRHSFEYLERDETIVAHLVGGIDAFIKLSQG 360

Query: 361 WPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHNLSSFADAVEKIMKEQ 393
           WPLS SPLKL+S+KSSDH+ +G+SLSL+CK E+MANSLD+ +R NLS+F DAVEK++ EQ
Sbjct: 361 WPLSKSPLKLLSIKSSDHHSRGISLSLLCKAEEMANSLDMHIRQNLSAFVDAVEKLLLEQ 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g02690 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g02690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Q3_CUCSA	7.7e-170	78.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129760 PE=4 SV=1	[more]
A0A0B0NXP0_GOSAR	3.0e-97	49.53	Uncharacterized protein OS=Gossypium arboreum GN=F383_07973 PE=4 SV=1	[more]
A0A0D2TX39_GOSRA	1.5e-96	49.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G350500 PE=4 SV=1	[more]
A0A061EKN9_THECC	3.8e-92	47.91	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_020266 PE=4 SV=1	[more]
A0A067KT01_JATCU	8.5e-92	48.21	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01098 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g02690 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23910.1	8.5e-43	32.20	BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymer...	[more]
AT3G24255.1	4.3e-39	35.57	RNA-directed DNA polymerase (reverse transcriptase)-related family p...	[more]

BLAST of Cp4.1LG08g02690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432396\|ref\|XP_004133985.1\|	1.1e-169	78.07	PREDICTED: uncharacterized protein LOC101211137 [Cucumis sativus]	[more]
gi\|659075804\|ref\|XP_008438339.1\|	2.3e-167	76.87	PREDICTED: uncharacterized protein LOC103483469 [Cucumis melo]	[more]
gi\|728839810\|gb\|KHG19253.1\|	4.3e-97	49.53	Uncharacterized protein F383_07973 [Gossypium arboreum]	[more]
gi\|823216592\|ref\|XP_012441000.1\|	2.1e-96	49.42	PREDICTED: uncharacterized protein LOC105766188 [Gossypium raimondii]	[more]
gi\|590656424\|ref\|XP_007034267.1\|	5.4e-92	47.91	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g02690.1	Cp4.1LG08g02690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 78..105 score: -coord: 168..188 scor
None	No IPR available	PANTHER	PTHR36037	FAMILY NOT NAMED	coord: 2..388 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g02690	Cucsa.256590	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g02690	CmaCh06G012060	Cucurbita maxima (Rimu)	cmacpeB854
Cp4.1LG08g02690	CmoCh14G019590	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g02690	Cla021406	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g02690	Csa3G129760	Cucumber (Chinese Long) v2	cpecuB859
Cp4.1LG08g02690	MELO3C006299	Melon (DHL92) v3.5.1	cpemeB813
Cp4.1LG08g02690	ClCG05G003180	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g02690	CSPI03G10690	Wild cucumber (PI 183967)	cpecpiB861
Cp4.1LG08g02690	MELO3C006299.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g02690	Bhi01G000148	Wax gourd	cpewgoB1111
Cp4.1LG08g02690	CsGy3G010770	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g02690	Carg06302	Silver-seed gourd	carcpeB1333

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g02690	Cp4.1LG03g18000	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g02690	Cucurbita pepo (Zucchini)	cpecpeB194
Cp4.1LG08g02690	Cucurbita pepo (Zucchini)	cpecpeB342
Cp4.1LG08g02690	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g02690	Cucurbita maxima (Rimu)	cmacpeB411
Cp4.1LG08g02690	Cucurbita moschata (Rifu)	cmocpeB373
Cp4.1LG08g02690	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g02690	Bottle gourd (USVL1VR-Ls)	cpelsiB697
Cp4.1LG08g02690	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g02690	Watermelon (Charleston Gray)	cpewcgB788
Cp4.1LG08g02690	Watermelon (97103) v1	cpewmB853
Cp4.1LG08g02690	Melon (DHL92) v3.5.1	cpemeB804
Cp4.1LG08g02690	Cucumber (Gy14) v2	cgybcpeB279
Cp4.1LG08g02690	Silver-seed gourd	carcpeB0251
Cp4.1LG08g02690	Silver-seed gourd	carcpeB0329
Cp4.1LG08g02690	Silver-seed gourd	carcpeB1507
Cp4.1LG08g02690	Cucumber (Chinese Long) v3	cpecucB1046
Cp4.1LG08g02690	Cucumber (Chinese Long) v3	cpecucB1056