MELO3C006150 (gene) Melon (DHL92) v3.5.1

NameMELO3C006150
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRibosomal RNA small subunit methyltransferase A
Locationchr6 : 1343774 .. 1348597 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCAAGTTGGTTTCGGATTGGGAGTTGAGGAGAGCGAGAAAATGGCGGCACCTCCACTTCCAAATCCTTTCCTCCCGCCATTTTCATTCACGAGCTATAGACAGAGCCCTAATTTATATTTTCCAGCTAGTACTGCCATCGCCGGCTCACGGTGGGCTATTCCGTTTGTATCTTGTTCTGCTGCTACCGTCAGAGTTGGAGAAGGAGTCAATCCAGATGATTATCATTCAACTTTAAGAGCTCTCAATTCCAAAGGCCGCGTGCCCAGAAAATCTCTCGGCCAGGTTCGTTCCCCAACACCCTGTTTACATGATTATCTTCTAGTTGTTTAAGTAATGCATGATGCTAGCGTTTGAAACACGGGGAAAGTTTGGGGAAATTGGGAAGTGTTAATGATAATCAGTAATTTCCGTTTTGTAAATTCTAATACGATACATGGAGAGGTAGAGAGAGATGATATATACAATATATTCTTCGATTATATGTTGGAAAACAGGAGGTGGTATTTCATCTGGATAGCACTTGAGATTTGAGAATACACCACGTATCTGGATAGTTTTGGGGAGATTTATTCAATGTGTATTGATGTTTTTGTTCACGTAAATCATTAGGAAATGATTATTTTGATACCGGGTATTGAGGTTTATCTCTTGCATTATGGTCAGCTCACAGCCCATCTCACTAATGCCCATAGAAGCTTCGCCTGCCCAAAACTAGGGAGAAAATGAAGCTTTAAGTTAAGTTTTGAATATGGGGATTGAACATAGGACATTGGAGGCTATTATTAGGATCTAATTCAGTTAACTGCAAGTTTGATTTGATGATGATTCCTTCTCAAAGATGAGTATCGGTTGATTTGTTGGCATCTTATATGTTTGCAGCATTATATGTTGAACTCTTCAATTAACGAGCAGTTGGCTGCTGCAGCTAATGTTAAAGAGGGTGACGTAGTATTGGAAATTGGGCCTGGAACTGGGTCGTTAACCAATGTCCTTATTAACTCAGGTGCAACGGTGCTTGCAGTTGAGAAGGTTAGTTTTCTCTCTCTCATGAACGATTTCTGTCAGATATCAATTCTTGGATCCAGATGGGAAAATGCGTGTTGAATTTACTAGGCAAATAATGCTCCTTCTAACCTATAAGTTGTTTTCTTGTCTACAAGAATTCTAATCTAGGAATGTTTGGATCTTTGTTCAAAGGTTACATTGATTGTTTGACCTGTCAAGTCTTTAAAGGATCCTTTACTCAATGAAAATAAGAACTTGAAATTTTTGTTCTCAGATGCAAGTTTATCTTTTACTTTGACTATGCACTCTGACATCTCATATCTTTCTTCTTTTGGATATACTTTTCAAGTATAGGACTCATATATGGCTGCTCTTGTAGATGAAAGATTTGCTAACACAAACAGATTGAAGGTAAGTTATATCTGACGTCATCAGTATTATTATCATTTTCCCCTTTCGTGATAATTTAGTAGGATTGCTGATCAAATGTCTTTGAGGACTAAAATATCTTAATTCTTAATTAAGAAGATCATTCCTATAAGTTGGTATTTCATTTTCTTCTTGTTAAGTTTTCTCACAATTAAGTCAATCAAGAAAGCTACTGGTGTGATGGGCCATGTAACTAGCCAATCTTTTATGCAACACTTGACGTTGCATCATTGAATATTCCCCATACACCAAGCGGCTTAAGATTCATTTTTCATATCATTAGGAAATGTTTCTTCAGAAAAAAAAAAAAATTATCACTAAAAAATGCTTCTTGTGGGATTACTTAGCAGACATTAATAAGATTGGTGGTGCCAGGAATACTATATTTGCCATGTTTAAGATTTGCGGTGTTAATAAGTTTCGTAATCTATGTTTATTATGAGCTTTTTTTATAAAGTTTCTTGAGCATAGGTAAATATAAAATTTGCCATGTTTAATCTTACAGTCTAGACAATGTTGTACTATTCCAACTGGAACATGCAGGTTCTGAATGAGGACTTTGTTAAATGCCACGTGAGCTCACATATGATGTCTTTTCTCAAAAGTATTGAGTTGTCTGAAGCAAGATCACAACCTGCTAAAGTGAGTACATCTACTAGATATGCTTGTTCACTTGTCACATTTGCTTGTATTGTGTCAGATATACCCAGTACAGCAACCATTTTCTGTTGCTGTTGGTGTTTTTCTTCCTTATTTTTTTATGCCGCGGTTCTCAAGTTCTTGCATTTTCTTAGATAATTTTGAGAACCAGTGCTTATGCAAGCTCGATATCTTTCAATGATTGCATGAAGTTTTTGTTTAGATCATACAGTATTTGTCATGTTTGTATACATTGTTTGGGAAACTCAAGTATGTTTTAGTTTATTCTTCAAAAGTGTATCTTTTTTAAGTGAACTATTTTATTCTAAGTTAGCTTAACTGAATTTCTTGTCGGCAGGTAGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATATTTTCAGAAGTTGTTCTTTTACTCCAGGTATATTCGATCGGCTCTAACCACTACATTATCTAGCTATTTCTTACCTCTCGAGAACAAGTTCGATTAGGACTTTCTTGTTTGTGGTTAATTTTGTAATCTATTTTCGTCATACAAAGAAAGAAAGAGAGAAGAAGAAAAGAAGAAAAGAAGAAAACAAAAGGGAGGGAGAGAGAGAGAGGAAAAGGAAAAAAAAAACAAATCTTCAAACTTTCAAGTTCCATTTTAGCTACGATATTGTCAATGTCTTTTCTATTGTGAAACTGATCTGTATTTAAACTAATCAGGAGGAGGCTGCTCTACGCCTGGTGGAAACATCTCTGAGGAGATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGGTACCCTACTAGTTGTACTCTTTCCATACTATTCACAATTTTGTGTATCTTATCCAGACATGCTTCAAAATTTATGAATGCATTGAGATCTCTATCTCCTAAAAGGAACTGATTTAATGATCGGTTACTTCATTCAAATTACCAAACCTTAACAACCTATCTGAGCATTATCTTTCTGAAGTTGAAAATTATTTCACTCTTGTTACTTTTTTGTCAGTTCTTAATGATTAACGTATACAAAATCTTAAACAAATAATTCAGATCTAACTAATGGAAACTGTGGTCTAAATATTTCGAATTTGTTTAAGCAGAGCTAAACTATATTATACTTTGATGAAAAATAAAATAAGTTGCCCCTAAGTGCATGGATAAACATATAACCAACTCCATGTATAACTTTAATACTTGCAACTTTTCTATGAAGTTATATATAAAATTTATCTTCCATTTCCTTTGTAGACCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTTTCCTCAGCCTAATGTAAGTGATCTTTAATTTGTAAGTATTCTAATTGCTTCTCTTCCTTTTCCTAGAACTAGAAGTATCCGTCTAATAATCACCAAAGTCTTTAACATATTTAAGAGCCTCTTCTCCCTACATTTTTCGGCCACCTGAATGAGAATAATAAGAAAGAGAAATGATAATGAAACTCCGATTTAGAAAACATTTGGACATATGGAATTACTTCCAATCTATCCGAAACTTTATTCTTCACTCACACACAGAATTTGAGAACTAATTTTTTCTTTTGTTTACGATTTTGTAGGTTGATGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCAGCAGACTGTCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTATATATTTTGCTCTGAATTCATACGTTTTCTTTCACTATTGTGAAAATTTTGGCTCGACCAAAGTATCATTTGCCTCTATCACTGCATTTGCATAGAAGAGTGCCTAGAGCACGTGTTTCTATAGTATAATATGACTATATAAACTTCACGTTTTCAAATTTTACACATTTAAACTTATATTGGTGAGCTACTAAATTCGCTACTGCATCTTAATTTCTTCCTTGACGTATTTATTACTATCTTTTGACATGCCTTGGATTTTTAATGCATTACAGGTTAACTCAGCATTCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCTCAGAGATAGAAAAAGCTTTAGAAGATTCTAGCCTTCCCCCAACTGTAAGGCATATCTATCTCTACTCTGCCTATTTTTTGTTTCCTCAGAATCTGTTAATTGATTTCTTCATATTTGATTTGTTTGCAGTCAAGACCGGAGGAGCTAAGCTTAGACGATTTTGTTAGGTTGCACAATTTGATAGTGAAACAGTAGTTCCTGTGGCGTTAACTTGAAAAAATGATCAATCCAAGTTCCTACAGGATGACTATTTCCTACTTTGGAAACCATCACTAGTTAAGAATCCAAGAAACGCTCAATTGGTGGCTCTGCGAAGAAGGTTGGAAGGAGGAGTATCAGTATAAGATATGCTCATTCACCGTTTTTAACCTAAACATAAAAGAAGAAAGGAAGGAGAGTGAAGGGGATGGAGTATGTGAAGTCAACTGAGAAGGAAAAGGAAGCGTCTACAACAGCTCTAAGAGAAGGATCACTCACTGGAAGCTACCGAAGCGAAAAAGCAGGTTCAATTCTTTTAATTTCTTGTTCTTTCCTTCTCTTAGTTGTTATTTATACGAGCGACTTGTTGTTACTGTTCATATTTAGCATGAAATGAACTCTTCTAGTTGTATTTGTATGTACTGAATTCTTGTATTGGAAAGGATAGAAGTCCGTGAGTTGAAATTTAAAATCATGCATTCCTTCATTTTGTTGG

mRNA sequence

ATCCAAGTTGGTTTCGGATTGGGAGTTGAGGAGAGCGAGAAAATGGCGGCACCTCCACTTCCAAATCCTTTCCTCCCGCCATTTTCATTCACGAGCTATAGACAGAGCCCTAATTTATATTTTCCAGCTAGTACTGCCATCGCCGGCTCACGGTGGGCTATTCCGTTTGTATCTTGTTCTGCTGCTACCGTCAGAGTTGGAGAAGGAGTCAATCCAGATGATTATCATTCAACTTTAAGAGCTCTCAATTCCAAAGGCCGCGTGCCCAGAAAATCTCTCGGCCAGCATTATATGTTGAACTCTTCAATTAACGAGCAGTTGGCTGCTGCAGCTAATGTTAAAGAGGGTGACGTAGTATTGGAAATTGGGCCTGGAACTGGGTCGTTAACCAATGTCCTTATTAACTCAGGTGCAACGGTGCTTGCAGTTGAGAAGGACTCATATATGGCTGCTCTTGTAGATGAAAGATTTGCTAACACAAACAGATTGAAGGTTCTGAATGAGGACTTTGTTAAATGCCACGTGAGCTCACATATGATGTCTTTTCTCAAAAGTATTGAGTTGTCTGAAGCAAGATCACAACCTGCTAAAGTAGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATATTTTCAGAAGTTGTTCTTTTACTCCAGGAGGAGGCTGCTCTACGCCTGGTGGAAACATCTCTGAGGAGATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGACCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTTTCCTCAGCCTAATGTTGATGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCAGCAGACTGTCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTAACTCAGCATTCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCTCAGAGATAGAAAAAGCTTTAGAAGATTCTAGCCTTCCCCCAACTTCAAGACCGGAGGAGCTAAGCTTAGACGATTTTGTTAGGTTGCACAATTTGATAGTGAAACAGTAGTTCCTGTGGCGTTAACTTGAAAAAATGATCAATCCAAGTTCCTACAGGATGACTATTTCCTACTTTGGAAACCATCACTAGTTAAGAATCCAAGAAACGCTCAATTGGTGGCTCTGCGAAGAAGGTTGGAAGGAGGAGTATCAGTATAAGATATGCTCATTCACCGTTTTTAACCTAAACATAAAAGAAGAAAGGAAGGAGAGTGAAGGGGATGGAGTATGTGAAGTCAACTGAGAAGGAAAAGGAAGCGTCTACAACAGCTCTAAGAGAAGGATCACTCACTGGAAGCTACCGAAGCGAAAAAGCAGGTTCAATTCTTTTAATTTCTTGTTCTTTCCTTCTCTTAGTTGTTATTTATACGAGCGACTTGTTGTTACTGTTCATATTTAGCATGAAATGAACTCTTCTAGTTGTATTTGTATGTACTGAATTCTTGTATTGGAAAGGATAGAAGTCCGTGAGTTGAAATTTAAAATCATGCATTCCTTCATTTTGTTGG

Coding sequence (CDS)

ATGGCGGCACCTCCACTTCCAAATCCTTTCCTCCCGCCATTTTCATTCACGAGCTATAGACAGAGCCCTAATTTATATTTTCCAGCTAGTACTGCCATCGCCGGCTCACGGTGGGCTATTCCGTTTGTATCTTGTTCTGCTGCTACCGTCAGAGTTGGAGAAGGAGTCAATCCAGATGATTATCATTCAACTTTAAGAGCTCTCAATTCCAAAGGCCGCGTGCCCAGAAAATCTCTCGGCCAGCATTATATGTTGAACTCTTCAATTAACGAGCAGTTGGCTGCTGCAGCTAATGTTAAAGAGGGTGACGTAGTATTGGAAATTGGGCCTGGAACTGGGTCGTTAACCAATGTCCTTATTAACTCAGGTGCAACGGTGCTTGCAGTTGAGAAGGACTCATATATGGCTGCTCTTGTAGATGAAAGATTTGCTAACACAAACAGATTGAAGGTTCTGAATGAGGACTTTGTTAAATGCCACGTGAGCTCACATATGATGTCTTTTCTCAAAAGTATTGAGTTGTCTGAAGCAAGATCACAACCTGCTAAAGTAGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATATTTTCAGAAGTTGTTCTTTTACTCCAGGAGGAGGCTGCTCTACGCCTGGTGGAAACATCTCTGAGGAGATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGACCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTTTCCTCAGCCTAATGTTGATGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCAGCAGACTGTCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTAACTCAGCATTCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCTCAGAGATAGAAAAAGCTTTAGAAGATTCTAGCCTTCCCCCAACTTCAAGACCGGAGGAGCTAAGCTTAGACGATTTTGTTAGGTTGCACAATTTGATAGTGAAACAGTAG

Protein sequence

MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDDYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ*
BLAST of MELO3C006150 vs. Swiss-Prot
Match: DIM1C_ARATH (Ribosomal RNA small subunit methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PFC1 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.5e-120
Identity = 224/333 (67.27%), Postives = 263/333 (78.98%), Query Frame = 1

Query: 15  SFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDDYHSTLRALNSKGRV 74
           S+T    SP+       + A SR     VSC  ++        PDDYHSTL++LNS+GR 
Sbjct: 19  SWTCGDNSPSKLLLGEISAALSRRRTVKVSCGKSS--------PDDYHSTLKSLNSRGRF 78

Query: 75  PRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSY 134
           PRKSLGQHYMLNS IN+QLA+AA+VKEGD VLEIGPGTGSLTNVLIN GATVLA+EKD +
Sbjct: 79  PRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPH 138

Query: 135 MAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNIST 194
           M  LV ERFA +++ KVL EDFVKCH+ SHM+S L++  LS   S  AKVVSN+PFNIST
Sbjct: 139 MVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIST 198

Query: 195 DIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRT 254
           D++K LLPMGDIFS+VVLLLQ+EAALRLVE +LR SEYRPIN+ +NFYS+PE  F+VPR 
Sbjct: 199 DVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNFRVPRE 258

Query: 255 NFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEI 314
           NFFPQP VDAAVV+FKLK   D P VSSTK+FFS+VNSAFNGKRKMLRKSLQHI +S +I
Sbjct: 259 NFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSPDI 318

Query: 315 EKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 348
           EKAL  + LP TSRPEEL+LDDFV+LHN+I ++
Sbjct: 319 EKALGVAGLPATSRPEELTLDDFVKLHNVIARE 343

BLAST of MELO3C006150 vs. Swiss-Prot
Match: RSMA_PARUW (Ribosomal RNA small subunit methyltransferase A OS=Protochlamydia amoebophila (strain UWE25) GN=rsmA PE=3 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 3.2e-43
Identity = 100/276 (36.23%), Postives = 164/276 (59.42%), Query Frame = 1

Query: 68  LNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVL 127
           LN  G  P+K L Q+++++ +I  ++  A++V+ G++VLEIGPG GSLT  ++   A V+
Sbjct: 13  LNQLGIFPKKGLSQNFLIDGNIIRKIVRASDVQPGNLVLEIGPGPGSLTQAMLEVEAHVV 72

Query: 128 AVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSN 187
           AVEKD  +A  +      + +L++  ED +   V   + S L+         Q AKV++N
Sbjct: 73  AVEKDFVLARELKRFQTPSKQLEIFCEDILMFSVEEELQSRLRD-------DQKAKVIAN 132

Query: 188 IPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSL-RRSEYRPINVFVNFYSDPE 247
           +P++++T I+ +++    +FS + +++QEE A R+  T+L  +S+Y    +F+NFYS P 
Sbjct: 133 LPYHLTTPILAEMVVRRKLFSSLTVMVQEEVARRM--TALPGQSDYSSFTIFLNFYSKPR 192

Query: 248 LKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQ 307
             F V R  F+P P VD+A+V  +LK+    P     + FF +  +AF  +RKMLR SL+
Sbjct: 193 YGFTVSRNCFYPAPKVDSAIVVLELKEP---PPNIDAQVFFKITRTAFEQRRKMLRASLK 252

Query: 308 HICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHN 343
            +   S+I  ALE     P +RPE LSL+DF++L++
Sbjct: 253 SLFDPSKISNALEIIGQNPQARPEVLSLEDFIKLYH 276

BLAST of MELO3C006150 vs. Swiss-Prot
Match: RSMA_MOOTA (Ribosomal RNA small subunit methyltransferase A OS=Moorella thermoacetica (strain ATCC 39073) GN=rsmA PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-34
Identity = 91/278 (32.73%), Postives = 151/278 (54.32%), Query Frame = 1

Query: 64  TLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSG 123
           TL  +  KG VPRKS GQ+++++++I  ++A AA V  GD V+EIGPG G+LT  L    
Sbjct: 10  TLALVREKGLVPRKSRGQNFLVDANIVRKIARAAEVGPGDTVVEIGPGLGALTQELAARA 69

Query: 124 ATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAK 183
             V+A+E D  + A ++E  A  + ++++  D +K      +   L +    E R    K
Sbjct: 70  GLVIAIEIDRELFAALEETLAGRDNVRLVAGDALKVDFDRLVAGILGT---GEGRLPTYK 129

Query: 184 VVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYS 243
           VV+N+P+ I+T I+  LL      +E+VL++Q E   R++       +Y  ++V V +Y+
Sbjct: 130 VVANLPYYITTPILMHLLTSRFRIAELVLMVQAEVGYRMLARP-GGKDYGALSVVVQYYT 189

Query: 244 DPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRK 303
           +P +  KVPRT F+P+P VD+ V+    +       V     FF +V +AFN +RK +  
Sbjct: 190 EPAVVLKVPRTVFYPRPEVDSLVLKLTCR-TRPVVQVEDEDFFFRVVRAAFNQRRKTILN 249

Query: 304 SLQHI-CTSSEIEKALEDSSLPPTSRPEELSLDDFVRL 341
           +L  +    S+I +AL  + + P  R E L +++F  +
Sbjct: 250 ALGSLGFEKSKIMEALAGAGIDPRRRGETLGMEEFASI 282

BLAST of MELO3C006150 vs. Swiss-Prot
Match: RSMA_STRZP (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pneumoniae (strain P1031) GN=rsmA PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.7e-34
Identity = 92/293 (31.40%), Postives = 157/293 (53.58%), Query Frame = 1

Query: 60  DYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVL 119
           DY  T   L   G   +KS GQ+++ +++I +++   A + +   V+EIGPG G+LT  L
Sbjct: 5   DYSVTKAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDDQVNVIEIGPGIGALTEFL 64

Query: 120 INSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARS 179
               A V+A E D  +  ++ +   + + + V+NED +K  ++ H+ +F K+ +L     
Sbjct: 65  AERAAEVMAFEIDHRLVPILADTLRDFDNVTVVNEDILKVDLAQHIQNF-KNPDL----- 124

Query: 180 QPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFV 239
            P KVV+N+P+ I+T I+  L+  G  FSE V+++Q+E A R +        Y  +++ V
Sbjct: 125 -PIKVVANLPYYITTPILMHLIESGIPFSEFVVMMQKEVADR-ISAQPNTKAYGSLSIAV 184

Query: 240 NFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRK 299
            +Y   ++ F VPRT F P PNVD+A++   +++     AV     FF +  ++F  +RK
Sbjct: 185 QYYMTAKVAFIVPRTVFVPAPNVDSAILKM-VRRPVPAVAVEDENFFFKVSKASFTHRRK 244

Query: 300 MLRKSLQHICTSSE-----IEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 348
            L  +L      +E     + KAL+ + L P+ R E LSL++F  L + +  Q
Sbjct: 245 TLWNNLTGYFGKTEEVKDKLTKALDQAGLSPSVRGEALSLEEFASLADALKGQ 288

BLAST of MELO3C006150 vs. Swiss-Prot
Match: RSMA_STRT2 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rsmA PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.6e-34
Identity = 89/290 (30.69%), Postives = 155/290 (53.45%), Query Frame = 1

Query: 60  DYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVL 119
           DY  T   L   G   +KS GQ+++ +++I +++   A + +   V+EIGPG G+LT  L
Sbjct: 5   DYSVTKAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEINKNVNVIEIGPGIGALTEFL 64

Query: 120 INSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARS 179
             + + V+A E D  +  ++++   + + +KV+NED +K  + + +  F       E   
Sbjct: 65  AENASEVMAFEIDERLVPILEDTLRDHDNVKVINEDVLKADLQTRVKEF-------ENPD 124

Query: 180 QPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFV 239
            P KVV+N+P+ I+T I+  L+     FSE V+++Q+E A R +        Y  +++ V
Sbjct: 125 LPIKVVANLPYYITTPILMHLIESKIPFSEFVVMMQKEVADR-ISAEPNTKAYGSLSIAV 184

Query: 240 NFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRK 299
            +Y   ++ F VPRT F P PNVD+A++    ++      V     FF +  ++F  +RK
Sbjct: 185 QYYMTTKMAFAVPRTVFVPAPNVDSAILKM-TRRKQPLVEVKDEDFFFRVSKASFLHRRK 244

Query: 300 MLRKSL-QHICTSSEI----EKALEDSSLPPTSRPEELSLDDFVRLHNLI 345
            L  +L  H   S E+    ++ALE++++ P+ R E LS+ DF RL + +
Sbjct: 245 TLWNNLTSHFGKSEEVKNKLDQALENAAIKPSIRGEALSISDFARLSDAL 285

BLAST of MELO3C006150 vs. TrEMBL
Match: A0A0A0L7J6_CUCSA (rRNA adenine N(6)-methyltransferase OS=Cucumis sativus GN=Csa_3G124770 PE=3 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 1.8e-178
Identity = 325/346 (93.93%), Postives = 332/346 (95.95%), Query Frame = 1

Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD 60
           MAA PLPNPFLPPFS TS  QSPN YFP ST++ GSRWA PFVSCSAA+VRVGEGVNPDD
Sbjct: 1   MAASPLPNPFLPPFSPTSSTQSPNFYFPPSTSVVGSRWATPFVSCSAASVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHST+RALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTIRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMA LVDERFANTNRLKVLNEDFVKC+VSSHMMS LKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR SEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLK+AAD PAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 347
           LRKSLQHICTS EIEKALEDSSL PTSRPEELSLDDFV+LHNLIVK
Sbjct: 301 LRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVK 346

BLAST of MELO3C006150 vs. TrEMBL
Match: A0A067K8U9_JATCU (rRNA adenine N(6)-methyltransferase OS=Jatropha curcas GN=JCGZ_14466 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-128
Identity = 231/298 (77.52%), Postives = 266/298 (89.26%), Query Frame = 1

Query: 49  TVRVGEGVNPDDYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEI 108
           TV  G   +PDDYHSTL+ALNS+GR PRK+LGQHYMLN+ +NEQL  AANV++GDVVLEI
Sbjct: 42  TVTCGTKRSPDDYHSTLKALNSRGRRPRKTLGQHYMLNTQVNEQLVGAANVEDGDVVLEI 101

Query: 109 GPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSF 168
           GPGTGSLTNVL+++GAT+LA+EKD +MAALV ERFA+T RL+VL EDFVKCH+ SHM+S 
Sbjct: 102 GPGTGSLTNVLLDAGATILAIEKDPHMAALVTERFAHTQRLRVLQEDFVKCHIRSHMLSL 161

Query: 169 LKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR 228
           L+S+       + AKVV+NIPFNISTD++KQLLPMGDIFSEVVLLLQEE ALRLVE+SLR
Sbjct: 162 LESLSTLNPEPRYAKVVANIPFNISTDVVKQLLPMGDIFSEVVLLLQEETALRLVESSLR 221

Query: 229 RSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFS 288
           +SEYRPIN+FVNFYSDPE KFKVPR+NFFPQPNVDAAVV+FKLKQA D PAV STKSFFS
Sbjct: 222 KSEYRPINIFVNFYSDPEYKFKVPRSNFFPQPNVDAAVVAFKLKQATDYPAVPSTKSFFS 281

Query: 289 MVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 347
           MVNSAFNGKRKMLR+SLQHICTS EIE+ALE+  LP TSRPEEL+LDDFV+LHNLIV+
Sbjct: 282 MVNSAFNGKRKMLRRSLQHICTSLEIEEALENVGLPATSRPEELTLDDFVKLHNLIVR 339

BLAST of MELO3C006150 vs. TrEMBL
Match: A0A061DUM4_THECC (rRNA adenine N(6)-methyltransferase OS=Theobroma cacao GN=TCM_005430 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.9e-125
Identity = 232/317 (73.19%), Postives = 268/317 (84.54%), Query Frame = 1

Query: 28  PASTAIAGSRWAIPFVSCSAATVRVGEGVNPDDYHSTLRALNSKGRVPRKSLGQHYMLNS 87
           PA  + AG+R  +PF+  + A+ R  +    DDYH+TL+ALNSKGR PRKSLGQHYMLNS
Sbjct: 23  PACNSSAGARTQMPFLRIACASTRSQD----DDYHATLKALNSKGRFPRKSLGQHYMLNS 82

Query: 88  SINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTN 147
            INEQL  AANV+EGDVVLEIGPGTGSLT VLI+SGATVLA+EKD +M  L+ ERF +T+
Sbjct: 83  EINEQLTRAANVEEGDVVLEIGPGTGSLTKVLISSGATVLAIEKDPHMVDLLRERFESTD 142

Query: 148 RLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIF 207
             KVL EDFVKCH+ SHM   L++ +     S  AKVVSNIPFNISTD++KQLLPMGDIF
Sbjct: 143 GFKVLQEDFVKCHIRSHMFPMLENRKGLNTSSTRAKVVSNIPFNISTDVVKQLLPMGDIF 202

Query: 208 SEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVV 267
           SEVVLLLQEE A+RLVE+SLR SEYRPIN+FVNFYS+PE KF+VPRTNFFPQPNVDAAVV
Sbjct: 203 SEVVLLLQEETAVRLVESSLRTSEYRPINIFVNFYSEPEYKFRVPRTNFFPQPNVDAAVV 262

Query: 268 SFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSSLPPTS 327
           +FKLKQA D P+V+STKSFFSMVNSAFNGKRKMLR+SLQHIC S+EIE+AL D+ LP TS
Sbjct: 263 TFKLKQAPDYPSVASTKSFFSMVNSAFNGKRKMLRRSLQHICPSNEIERALGDAGLPTTS 322

Query: 328 RPEELSLDDFVRLHNLI 345
           RPEEL+LDDFV+LHNLI
Sbjct: 323 RPEELTLDDFVKLHNLI 335

BLAST of MELO3C006150 vs. TrEMBL
Match: A0A059CIK9_EUCGR (rRNA adenine N(6)-methyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_D02236 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124
Identity = 232/305 (76.07%), Postives = 263/305 (86.23%), Query Frame = 1

Query: 42  FVSCSAATVRVGEGVNPDDYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKE 101
           F++CS      G   + DDYH+TLRALNSKGR PRKSLGQHYMLN+ INEQL  AA VKE
Sbjct: 40  FIACSK-----GLRGSHDDYHATLRALNSKGRTPRKSLGQHYMLNNDINEQLVNAAGVKE 99

Query: 102 GDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHV 161
           GDVVLEIGPGTGSLTNVLI++GATVL +EKD YMA++V ERFA TNRLKVL EDFVKCH+
Sbjct: 100 GDVVLEIGPGTGSLTNVLIHAGATVLGIEKDPYMASIVTERFAETNRLKVLREDFVKCHI 159

Query: 162 SSHMMSFLKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALR 221
            SHM SFL SI +S+ + + AKVVSNIPFNISTD++KQ+LPMGDIFSEVVLLLQEE A+R
Sbjct: 160 HSHMSSFLASI-VSDMKPRYAKVVSNIPFNISTDVVKQILPMGDIFSEVVLLLQEETAVR 219

Query: 222 LVETSLRRSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVS 281
           LV ++LR SEYRPIN+FVNFYS PE KF VPRTNFFPQPNVDAAVV F+LK+ AD P VS
Sbjct: 220 LVVSALRTSEYRPINIFVNFYSVPEYKFNVPRTNFFPQPNVDAAVVKFRLKKTADYPPVS 279

Query: 282 STKSFFSMVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLH 341
           ST+SFFSMVNSAFNGKRKMLRKSLQH+CT+ EIEKALE+  LP TSRP EL+LDDFV+LH
Sbjct: 280 STRSFFSMVNSAFNGKRKMLRKSLQHLCTAVEIEKALEEVGLPATSRPGELTLDDFVKLH 338

Query: 342 NLIVK 347
           NL+VK
Sbjct: 340 NLMVK 338

BLAST of MELO3C006150 vs. TrEMBL
Match: M5X053_PRUPE (rRNA adenine N(6)-methyltransferase OS=Prunus persica GN=PRUPE_ppa008000mg PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123
Identity = 245/349 (70.20%), Postives = 269/349 (77.08%), Query Frame = 1

Query: 1   MAAPPLP--NPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGV-N 60
           M +PPL      L P S T          P   +  G+R      S S   +R   G  N
Sbjct: 1   MNSPPLLLLQQSLTPISPTENLIQVKSPLPVHNSTLGARTPASS-SSSLCYIRACAGRGN 60

Query: 61  PDDYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTN 120
           PDDYH TL ALNSKGR PRKSLGQHYML+S INEQL AAANV EGDVVLEIGPGTGSLTN
Sbjct: 61  PDDYHGTLTALNSKGRFPRKSLGQHYMLDSEINEQLTAAANVGEGDVVLEIGPGTGSLTN 120

Query: 121 VLINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEA 180
           VLI++GA VLA+EKD +MA LV ERF+ T R KVL EDFVKCH+ SHM S L SIE S A
Sbjct: 121 VLISAGAFVLAIEKDPHMATLVSERFSETERFKVLKEDFVKCHIHSHMSSLLASIEPSSA 180

Query: 181 RSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINV 240
            S+ AKVV+NIPFNISTD++K+LLPMGDIFSEVVLLLQEE ALRLVE+SLR SEYRPIN+
Sbjct: 181 DSRHAKVVANIPFNISTDVVKRLLPMGDIFSEVVLLLQEETALRLVESSLRTSEYRPINI 240

Query: 241 FVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGK 300
           FVNFYSDP+   KVPRT FFPQPNVDAAVV FKLKQ A  P+VSSTKSFFSMVNSAFNGK
Sbjct: 241 FVNFYSDPQFICKVPRTKFFPQPNVDAAVVKFKLKQPAHHPSVSSTKSFFSMVNSAFNGK 300

Query: 301 RKMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 347
           RKMLR+SLQHICT  EIE AL +   P TSRPEELS+DDFV+LHNLIVK
Sbjct: 301 RKMLRRSLQHICTPMEIENALGNVGRPATSRPEELSMDDFVKLHNLIVK 348

BLAST of MELO3C006150 vs. TAIR10
Match: AT1G01860.1 (AT1G01860.1 Ribosomal RNA adenine dimethylase family protein)

HSP 1 Score: 433.3 bits (1113), Expect = 1.4e-121
Identity = 224/333 (67.27%), Postives = 263/333 (78.98%), Query Frame = 1

Query: 15  SFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDDYHSTLRALNSKGRV 74
           S+T    SP+       + A SR     VSC  ++        PDDYHSTL++LNS+GR 
Sbjct: 19  SWTCGDNSPSKLLLGEISAALSRRRTVKVSCGKSS--------PDDYHSTLKSLNSRGRF 78

Query: 75  PRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSY 134
           PRKSLGQHYMLNS IN+QLA+AA+VKEGD VLEIGPGTGSLTNVLIN GATVLA+EKD +
Sbjct: 79  PRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPH 138

Query: 135 MAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNIST 194
           M  LV ERFA +++ KVL EDFVKCH+ SHM+S L++  LS   S  AKVVSN+PFNIST
Sbjct: 139 MVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIST 198

Query: 195 DIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPRT 254
           D++K LLPMGDIFS+VVLLLQ+EAALRLVE +LR SEYRPIN+ +NFYS+PE  F+VPR 
Sbjct: 199 DVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNFRVPRE 258

Query: 255 NFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSEI 314
           NFFPQP VDAAVV+FKLK   D P VSSTK+FFS+VNSAFNGKRKMLRKSLQHI +S +I
Sbjct: 259 NFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSPDI 318

Query: 315 EKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 348
           EKAL  + LP TSRPEEL+LDDFV+LHN+I ++
Sbjct: 319 EKALGVAGLPATSRPEELTLDDFVKLHNVIARE 343

BLAST of MELO3C006150 vs. TAIR10
Match: AT2G47420.1 (AT2G47420.1 Ribosomal RNA adenine dimethylase family protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.8e-21
Identity = 78/243 (32.10%), Postives = 114/243 (46.91%), Query Frame = 1

Query: 77  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMA 136
           KS GQH + N  + + +   A +K  DV+LEIGPGTG+LT  L+ +G  V+AVE DS M 
Sbjct: 30  KSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKEVIAVELDSRMV 89

Query: 137 ALVDERFANT---NRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNIS 196
             +  RF  T   NRLKV+  D +K  +    +                  V+NIP+ IS
Sbjct: 90  LELQRRFQGTPFSNRLKVIQGDVLKTELPRFDI-----------------CVANIPYQIS 149

Query: 197 TDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPR 256
           + +  +LL     F   V++ Q E A+RLV      + Y  ++V    Y+      KV +
Sbjct: 150 SPLTFKLLFHPTSFRCAVIMYQREFAMRLV-AQPGDNLYCRLSVNTQLYARVSHLLKVGK 209

Query: 257 TNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSSE 316
            NF P P VD++VV  + ++    P V+  K +   +   F  K K L    +     S 
Sbjct: 210 NNFRPPPKVDSSVVRIEPRRPG--PQVNK-KEWDGFLRVCFIRKNKTLGSIFKQKSVLSM 251

BLAST of MELO3C006150 vs. TAIR10
Match: AT5G66360.2 (AT5G66360.2 Ribosomal RNA adenine dimethylase family protein)

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-20
Identity = 65/228 (28.51%), Postives = 115/228 (50.44%), Query Frame = 1

Query: 77  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMA 136
           KS GQH + N+ I + +  +++++  D VLEIGPGTG+LT  L+ +   V+AVE D  M 
Sbjct: 65  KSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVELDKRMV 124

Query: 137 ALVDERFAN---TNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKVVSNIPFNIS 196
            ++ +R ++    ++L ++ +D +K       +                 VV+NIP+NIS
Sbjct: 125 EILRKRVSDHGFADKLTIIQKDVLKTDFPHFDL-----------------VVANIPYNIS 184

Query: 197 TDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSDPELKFKVPR 256
           + ++ +L+   + F    LLLQ+E + RL+  +   S++  + V V   +D +    V +
Sbjct: 185 SPLVAKLVYGSNTFRSATLLLQKEFSRRLL-ANPGDSDFNRLAVNVKLVADVKFVMDVSK 244

Query: 257 TNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKML 302
             F P P VD++V+    K+    P V + + + +   + F  K K L
Sbjct: 245 REFVPPPKVDSSVIRITPKEI--IPDV-NVQEWLAFTRTCFGKKNKTL 271

BLAST of MELO3C006150 vs. NCBI nr
Match: gi|659075364|ref|XP_008438106.1| (PREDICTED: probable dimethyladenosine transferase [Cucumis melo])

HSP 1 Score: 680.6 bits (1755), Expect = 1.4e-192
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1

Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD 60
           MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD
Sbjct: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 348
           LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ
Sbjct: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 347

BLAST of MELO3C006150 vs. NCBI nr
Match: gi|449432199|ref|XP_004133887.1| (PREDICTED: probable dimethyladenosine transferase [Cucumis sativus])

HSP 1 Score: 633.3 bits (1632), Expect = 2.6e-178
Identity = 325/346 (93.93%), Postives = 332/346 (95.95%), Query Frame = 1

Query: 1   MAAPPLPNPFLPPFSFTSYRQSPNLYFPASTAIAGSRWAIPFVSCSAATVRVGEGVNPDD 60
           MAA PLPNPFLPPFS TS  QSPN YFP ST++ GSRWA PFVSCSAA+VRVGEGVNPDD
Sbjct: 1   MAASPLPNPFLPPFSPTSSTQSPNFYFPPSTSVVGSRWATPFVSCSAASVRVGEGVNPDD 60

Query: 61  YHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120
           YHST+RALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI
Sbjct: 61  YHSTIRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLI 120

Query: 121 NSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQ 180
           NSGATVLAVEKDSYMA LVDERFANTNRLKVLNEDFVKC+VSSHMMS LKSIELSEARSQ
Sbjct: 121 NSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSEARSQ 180

Query: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVN 240
           PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR SEYRPINVFVN
Sbjct: 181 PAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPINVFVN 240

Query: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKM 300
           FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLK+AAD PAVSSTKSFFSMVNSAFNGKRKM
Sbjct: 241 FYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNGKRKM 300

Query: 301 LRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 347
           LRKSLQHICTS EIEKALEDSSL PTSRPEELSLDDFV+LHNLIVK
Sbjct: 301 LRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVK 346

BLAST of MELO3C006150 vs. NCBI nr
Match: gi|802697426|ref|XP_012083490.1| (PREDICTED: probable dimethyladenosine transferase [Jatropha curcas])

HSP 1 Score: 467.2 bits (1201), Expect = 2.4e-128
Identity = 231/298 (77.52%), Postives = 266/298 (89.26%), Query Frame = 1

Query: 49  TVRVGEGVNPDDYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEI 108
           TV  G   +PDDYHSTL+ALNS+GR PRK+LGQHYMLN+ +NEQL  AANV++GDVVLEI
Sbjct: 42  TVTCGTKRSPDDYHSTLKALNSRGRRPRKTLGQHYMLNTQVNEQLVGAANVEDGDVVLEI 101

Query: 109 GPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSF 168
           GPGTGSLTNVL+++GAT+LA+EKD +MAALV ERFA+T RL+VL EDFVKCH+ SHM+S 
Sbjct: 102 GPGTGSLTNVLLDAGATILAIEKDPHMAALVTERFAHTQRLRVLQEDFVKCHIRSHMLSL 161

Query: 169 LKSIELSEARSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLR 228
           L+S+       + AKVV+NIPFNISTD++KQLLPMGDIFSEVVLLLQEE ALRLVE+SLR
Sbjct: 162 LESLSTLNPEPRYAKVVANIPFNISTDVVKQLLPMGDIFSEVVLLLQEETALRLVESSLR 221

Query: 229 RSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFS 288
           +SEYRPIN+FVNFYSDPE KFKVPR+NFFPQPNVDAAVV+FKLKQA D PAV STKSFFS
Sbjct: 222 KSEYRPINIFVNFYSDPEYKFKVPRSNFFPQPNVDAAVVAFKLKQATDYPAVPSTKSFFS 281

Query: 289 MVNSAFNGKRKMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVK 347
           MVNSAFNGKRKMLR+SLQHICTS EIE+ALE+  LP TSRPEEL+LDDFV+LHNLIV+
Sbjct: 282 MVNSAFNGKRKMLRRSLQHICTSLEIEEALENVGLPATSRPEELTLDDFVKLHNLIVR 339

BLAST of MELO3C006150 vs. NCBI nr
Match: gi|1009162258|ref|XP_015899341.1| (PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic isoform X3 [Ziziphus jujuba])

HSP 1 Score: 466.5 bits (1199), Expect = 4.2e-128
Identity = 246/347 (70.89%), Postives = 285/347 (82.13%), Query Frame = 1

Query: 1   MAAPPLPNPFLPPF-SFTSYRQSPNLYFPASTAIAGS-RWAIPFVSCSAATVRVGEGVNP 60
           M +PPL   +LPP  S T+YRQ       A  +++G+ R + P V     T     G + 
Sbjct: 1   MTSPPLLLQYLPPLPSATTYRQRLKPPRRAHDSVSGAGRTSPPNVIGCCGTKSGRRGSSS 60

Query: 61  DDYHSTLRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNV 120
           DDYH+TL+ALNS+GR PRKSLGQHYMLNS INEQLA AA+V EGDVVLEIGPGTGSLTNV
Sbjct: 61  DDYHATLKALNSRGRFPRKSLGQHYMLNSEINEQLANAADVGEGDVVLEIGPGTGSLTNV 120

Query: 121 LINSGATVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEAR 180
           LI++GA VLA+EKD +MAALV+ERFA T+RLKVLNEDFVKCH+ SHMM  + SI+     
Sbjct: 121 LIDAGAIVLAIEKDPHMAALVNERFAGTDRLKVLNEDFVKCHIRSHMMPLINSIKPLGRN 180

Query: 181 SQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVF 240
           S+ AKVVSNIPFNIS D++KQLLP+GDIFSEVVLLLQEE ALRLVE+SLR SEYRPIN+F
Sbjct: 181 SRYAKVVSNIPFNISKDVVKQLLPLGDIFSEVVLLLQEETALRLVESSLRTSEYRPINIF 240

Query: 241 VNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKR 300
           VNFYSDPE KFKVPRT FFP+PNVDAAVV+FKLKQ  D P+VSSTKSFFSM+ SAFNGKR
Sbjct: 241 VNFYSDPEFKFKVPRTCFFPRPNVDAAVVTFKLKQPQDYPSVSSTKSFFSMIASAFNGKR 300

Query: 301 KMLRKSLQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIV 346
           KMLRK+LQHICTSSEIE+AL +  LP TSRPEEL+LDDFVRLHN+++
Sbjct: 301 KMLRKTLQHICTSSEIEEALGNIGLPATSRPEELTLDDFVRLHNVMM 347

BLAST of MELO3C006150 vs. NCBI nr
Match: gi|470142298|ref|XP_004306848.1| (PREDICTED: probable dimethyladenosine transferase isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 461.5 bits (1186), Expect = 1.3e-126
Identity = 239/343 (69.68%), Postives = 271/343 (79.01%), Query Frame = 1

Query: 11  LPPFSFTSYRQSPNLYFPASTAIAGSRWAIP--FVSCSAATVRVGEG----VNPDDYHST 70
           LPP       Q+P     A  +  G+R + P    +C+  T + G G     NPDDYH+T
Sbjct: 14  LPPI------QNPKPTLAAQNSTPGARQSTPTYITACAKTTRKTGGGGGRRKNPDDYHAT 73

Query: 71  LRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGA 130
           L ALNSKGR PRKSLGQHYML+S +N+QL AAA V EGDVVLEIGPGTGSLTNVLIN+GA
Sbjct: 74  LTALNSKGRFPRKSLGQHYMLDSEVNDQLVAAAEVGEGDVVLEIGPGTGSLTNVLINAGA 133

Query: 131 TVLAVEKDSYMAALVDERFANTNRLKVLNEDFVKCHVSSHMMSFLKSIELSEARSQPAKV 190
           TVLA+EKD YMA LV ERFA T +LKVL EDFVKCH+ SHM S L SIE S A  + AKV
Sbjct: 134 TVLAIEKDPYMATLVSERFAQTGQLKVLQEDFVKCHIHSHMSSLLSSIESSGASPRHAKV 193

Query: 191 VSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRRSEYRPINVFVNFYSD 250
           V+NIPFNISTD++KQLLPMGDIFSEVVLLLQEE A RLV++ LR SEYRPIN+F+NFYSD
Sbjct: 194 VANIPFNISTDVVKQLLPMGDIFSEVVLLLQEETAFRLVKSYLRTSEYRPINIFINFYSD 253

Query: 251 PELKFKVPRTNFFPQPNVDAAVVSFKLKQAADCPAVSSTKSFFSMVNSAFNGKRKMLRKS 310
           PE KFKVPR NFFPQPNVDAAVV F+LK+    P+VSSTKSFFSMVNSAFNGKRKMLRKS
Sbjct: 254 PEFKFKVPRANFFPQPNVDAAVVKFRLKEPTQYPSVSSTKSFFSMVNSAFNGKRKMLRKS 313

Query: 311 LQHICTSSEIEKALEDSSLPPTSRPEELSLDDFVRLHNLIVKQ 348
           LQHICT SEIE ALE+   P TSRPEEL+ +DFV+LHN+IV +
Sbjct: 314 LQHICTPSEIESALENVGRPATSRPEELTTEDFVKLHNMIVTE 350

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
DIM1C_ARATH2.5e-12067.27Ribosomal RNA small subunit methyltransferase, chloroplastic OS=Arabidopsis thal... [more]
RSMA_PARUW3.2e-4336.23Ribosomal RNA small subunit methyltransferase A OS=Protochlamydia amoebophila (s... [more]
RSMA_MOOTA1.2e-3432.73Ribosomal RNA small subunit methyltransferase A OS=Moorella thermoacetica (strai... [more]
RSMA_STRZP2.7e-3431.40Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pneumoniae (str... [more]
RSMA_STRT24.6e-3430.69Ribosomal RNA small subunit methyltransferase A OS=Streptococcus thermophilus (s... [more]
Match NameE-valueIdentityDescription
A0A0A0L7J6_CUCSA1.8e-17893.93rRNA adenine N(6)-methyltransferase OS=Cucumis sativus GN=Csa_3G124770 PE=3 SV=1[more]
A0A067K8U9_JATCU1.7e-12877.52rRNA adenine N(6)-methyltransferase OS=Jatropha curcas GN=JCGZ_14466 PE=3 SV=1[more]
A0A061DUM4_THECC3.9e-12573.19rRNA adenine N(6)-methyltransferase OS=Theobroma cacao GN=TCM_005430 PE=3 SV=1[more]
A0A059CIK9_EUCGR1.1e-12476.07rRNA adenine N(6)-methyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_D02236 PE=3... [more]
M5X053_PRUPE1.7e-12370.20rRNA adenine N(6)-methyltransferase OS=Prunus persica GN=PRUPE_ppa008000mg PE=3 ... [more]
Match NameE-valueIdentityDescription
AT1G01860.11.4e-12167.27 Ribosomal RNA adenine dimethylase family protein[more]
AT2G47420.12.8e-2132.10 Ribosomal RNA adenine dimethylase family protein[more]
AT5G66360.25.2e-2028.51 Ribosomal RNA adenine dimethylase family protein[more]
Match NameE-valueIdentityDescription
gi|659075364|ref|XP_008438106.1|1.4e-192100.00PREDICTED: probable dimethyladenosine transferase [Cucumis melo][more]
gi|449432199|ref|XP_004133887.1|2.6e-17893.93PREDICTED: probable dimethyladenosine transferase [Cucumis sativus][more]
gi|802697426|ref|XP_012083490.1|2.4e-12877.52PREDICTED: probable dimethyladenosine transferase [Jatropha curcas][more]
gi|1009162258|ref|XP_015899341.1|4.2e-12870.89PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic isoform ... [more]
gi|470142298|ref|XP_004306848.1|1.3e-12669.68PREDICTED: probable dimethyladenosine transferase isoform X1 [Fragaria vesca sub... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001737KsgA/Erm
IPR011530rRNA_adenine_dimethylase
IPR020596rRNA_Ade_Mease_Trfase_CS
IPR020598rRNA_Ade_methylase_Trfase_N
IPR023165rRNA_Ade_diMease-like
Vocabulary: Molecular Function
TermDefinition
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0008649rRNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0000154rRNA modification
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080009 mRNA methylation
biological_process GO:0006281 DNA repair
biological_process GO:0031167 rRNA methylation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0000154 rRNA modification
biological_process GO:0006364 rRNA processing
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009409 response to cold
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0008649 rRNA methyltransferase activity
molecular_function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function GO:0016422 mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU57739melon EST collection version 4.0transcribed_cluster
MU57740melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006150T1MELO3C006150T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU57739MU57739transcribed_cluster
MU57740MU57740transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPANTHERPTHR11727DIMETHYLADENOSINE TRANSFERASEcoord: 15..347
score: 2.9E
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPFAMPF00398RrnaADcoord: 76..344
score: 1.3
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPROFILEPS51689SAM_RNA_A_N6_MTcoord: 75..347
score: 62
IPR011530Ribosomal RNA adenine dimethylaseTIGRFAMsTIGR00755TIGR00755coord: 75..343
score: 2.5
IPR020596Ribosomal RNA adenine methylase transferase, conserved sitePROSITEPS01131RRNA_A_DIMETHcoord: 105..132
scor
IPR020598Ribosomal RNA adenine methylase transferase, N-terminalSMARTSM00650rADcneu6coord: 89..273
score: 8.7
IPR023165rRNA adenine dimethylase-likeGENE3DG3DSA:1.10.8.100coord: 280..346
score: 8.4
NoneNo IPR availablePANTHERPTHR11727:SF11DIMETHYLADENOSINE TRANSFERASEcoord: 15..347
score: 2.9E

The following gene(s) are paralogous to this gene:

None