MELO3C005984.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C005984.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing family protein
Locationchr06 : 385470 .. 388328 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCAGATACAGAAAACAAAAGGATTCCCTCACAACCATTGTACCTTCCGAATCCTTCACTTCACTGGTATGGCTTTCAAGGCTCCTACTATGACTTCTTTCGCCTTTTTTCCCTATTTTATTACTTGGGGTCTTCATTTTTCAGTCCCATAGGGTGTTCAGATGTGCTATTGGTTCGTTTGATTTCTTTCTCCTTTTCAGCTCGAATTGCTAATAGTGTTATGTATTTTCCTTCTTTTATGGCTTTTGGTTTCTTTAGCTGCCTCCCGATGCGCACGTTGGCGAGATTTATCCTACTTATTTGTCTTTCTGTCTGATATTACTCCATTCAGGTATGTGTTTTTCAATAGTGTTTTGGGTTTTTGCCCATATTCCTTTCTGGCTTTGTCTTTTGCTATTTGATTCTGATCATTATTTGTTATTCTGTTTGATATTACTCCCATCTAGGTGTGTGTTTTTCACTCTGATCGTTTTAATCTTCCGACTGTGGTTGTCAGCCCGTACAACTCGAATTCTGTCAGCTCTGTCTTGTTTTCTCTCAGAACATTCAACAAACACTTGGAGCTCCTAACTTTTTCCACACGATGTGGAAAGTATGACCTGATTTTTTGCGGATTGTTTCTAGCTAACTACGTTGGATGGAAGAATGAGATCGAAGTTGTGTGCATTCTCGCTTCTGGGTCGTACGTATTTCAGTTGGTCTTCTATTAAATACGCCCACCATGTCAATCTCAGAGCTCTTACCAGTGTTACCATGGCCTCTGGTTTTAGTTCGTGGCCTACGCGCATTCATACTGTTGACGCTGCCACTGTACCGAACTCCAATATTGGGAATTTCTTCTCATTTGGCTTTTGTTCTCATTCTTATGTTTCTTCAAGCTCAAACCACGATATTTTGAATGCAACTCCGGAAGAATCTTGTCACTATGCTGCCGATAATGATCATGAGAGTGGCGATGATCATGATAATCTAGAAGAATGTGAAGAAGAGGACATGGACATCAATGACGAGGGTGTGATAAAAGATGTTGATGCCATTATGGATATATTTCGTGGGTTCAGGAATGTAAATCGAATTGAAGTGAAAAATAAGCTTGAGCATTGCTTTATTAAGGTCTCAGGAGAGTTGGTAGTAGCAGTACTTTCTCGAATCCGTAATGATTGGGAAGCAGCTTTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATGCCCACTCTGTACGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGAAAGTTTGATACGGCATGGGCCTTGATTGATGAGATGAGAGGAGGGACGGCAGGCTCTTCGCTAGTGACACCTCAAACCCTTCTAATCATGATTAGGAGATACTGTGCTGTTCATGATGTTGCAAAAGCTATAAATACATTCCATGCTCATAAAAGATTCGGATTTAACATTGGACTAGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGATACAAAAATGTGAAAGATGCTGAATATTTGCTGTTTTGCAACAAAGATGTGTTCCCATTTAACACAAAGAGTTTCAATATTATCCTCAATGGATGGTGTATAATTGGGAGTCTTCGTGACACCGAGAGAGTTTGGAAGGAGATGACACGGAGAGGTATCAGTCATGATGCTATCTCATATGCAAGCTCCATTTCTTGTTATTCAAAAGTTCGCAACCTTCATAAGGTGCTCAAGCTTTTTGAAGATATGAAGCGAATGAAAATTGACCCTGATAGGAAAGTGTACAATGCAGTCATTCACTCTCTTGCAAAAGGTAGGTGTCTGAAAGAAGCTGCTGATCTCATAAAAACAATGGAAGAGAAGGGTATTATTCCAAATGTTGTTACTTATAACTCAGTTATCAAACCTTTATGCAAGGCCAGGAGATTTGATGAAGCTAGAGCGGTTTTTGAGGAGATTTTGCAGCGAGGCCTCTGCCCAACAATTCAAACTTATCATGCCTTCTTAAGATTCCTGAGAACAGAGGAAGAAATATTTGAGCTATTGAAGAAGATGAGAACAATGGGGTGCAATCCAACTGCTGACACCTACATAATGTTGATCAGAAAGTTTTGCCGATGGCGCCAGCTTGATAACGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTAGTCCTGATCGAAGCTCTTATATTGTCTTAATACATGGTCTCTTCTTGAATGGAAAACTAGAAGATGCACATAAATACTATTTGGAAATGAAGGAAAAAGAGTTACTTCCTGAACCAAAGATAGATGAGGTACTACAAGCTTGGCTTGCTGGTAGGTCAATGTTTCAAGAGAACCCATCAGATTGTTCTGGGGAAGGCAAAAACTCCAGATTGTTCCCCGAAAAGGATTTTCACCGACAACCTGAGATTATAAAGGGTTCAAGAGATCGTGGTTTCTCATTCTGGAGGCAGTAGAGTTTTGAGTCTATCTTAGCCCATCAATCTAGAGGTTCAAATGGTTTGTTAGGTCCTTAGAGTGATGACTTTTGTTTTGTCATCTCACAGTGGTCCTTTTCCTTCGTTATGCCATCTTTTAAACCATTTTACGCAATACCCTCGATCTAAGAGGCCGGAGATTCTAATCCACAACTTCACATACTATTGAAATTGGAAAAGAGAATTGCGATGGTAAAAGATGTTATCATGTTATCGGATTAAGAAAAGAAAACTGCCAAGGACTGTCAATGGTAAATTATGCAACCTTCAGTTTAACTGCTTAAATACTTTAGGAAGTCATTTCAAACATATTATAAATGAGTTGTTATGCCTGTAACAAGAGTCCTAAGCCACAATACTATTCTTTGGTGTGGAGAGGACTATGGAA

mRNA sequence

AACCCAGATACAGAAAACAAAAGGATTCCCTCACAACCATTGTACCTTCCGAATCCTTCACTTCACTGCTGCCTCCCGATGCGCACGTTGGCGAGATTTATCCTACTTATTTGTCTTTCTGTCTGATATTACTCCATTCAGGTGTGTGTTTTTCACTCTGATCGTTTTAATCTTCCGACTGTGGTTGTCAGCCCGTACAACTCGAATTCTGTCAGCTCTGTCTTGTTTTCTCTCAGAACATTCAACAAACACTTGGAGCTCCTAACTTTTTCCACACGATGTGGAAAGTATGACCTGATTTTTTGCGGATTGTTTCTAGCTAACTACGTTGGATGGAAGAATGAGATCGAAGTTGTGTGCATTCTCGCTTCTGGGTCGTACGTATTTCAGTTGGTCTTCTATTAAATACGCCCACCATGTCAATCTCAGAGCTCTTACCAGTGTTACCATGGCCTCTGGTTTTAGTTCGTGGCCTACGCGCATTCATACTGTTGACGCTGCCACTGTACCGAACTCCAATATTGGGAATTTCTTCTCATTTGGCTTTTGTTCTCATTCTTATGTTTCTTCAAGCTCAAACCACGATATTTTGAATGCAACTCCGGAAGAATCTTGTCACTATGCTGCCGATAATGATCATGAGAGTGGCGATGATCATGATAATCTAGAAGAATGTGAAGAAGAGGACATGGACATCAATGACGAGGGTGTGATAAAAGATGTTGATGCCATTATGGATATATTTCGTGGGTTCAGGAATGTAAATCGAATTGAAGTGAAAAATAAGCTTGAGCATTGCTTTATTAAGGTCTCAGGAGAGTTGGTAGTAGCAGTACTTTCTCGAATCCGTAATGATTGGGAAGCAGCTTTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATGCCCACTCTGTACGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGAAAGTTTGATACGGCATGGGCCTTGATTGATGAGATGAGAGGAGGGACGGCAGGCTCTTCGCTAGTGACACCTCAAACCCTTCTAATCATGATTAGGAGATACTGTGCTGTTCATGATGTTGCAAAAGCTATAAATACATTCCATGCTCATAAAAGATTCGGATTTAACATTGGACTAGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGATACAAAAATGTGAAAGATGCTGAATATTTGCTGTTTTGCAACAAAGATGTGTTCCCATTTAACACAAAGAGTTTCAATATTATCCTCAATGGATGGTGTATAATTGGGAGTCTTCGTGACACCGAGAGAGTTTGGAAGGAGATGACACGGAGAGGTATCAGTCATGATGCTATCTCATATGCAAGCTCCATTTCTTGTTATTCAAAAGTTCGCAACCTTCATAAGATAGATGAGGTACTACAAGCTTGGCTTGCTGGTAGGTCAATGTTTCAAGAGAACCCATCAGATTGTTCTGGGGAAGGCAAAAACTCCAGATTGTTCCCCGAAAAGGATTTTCACCGACAACCTGAGATTATAAAGGGTTCAAGAGATCGTGGTTTCTCATTCTGGAGGCAGTAGAGTTTTGAGTCTATCTTAGCCCATCAATCTAGAGGTTCAAATGGTTTGTTAGGTCCTTAGAGTGATGACTTTTGTTTTGTCATCTCACAGTGGTCCTTTTCCTTCGTTATGCCATCTTTTAAACCATTTTACGCAATACCCTCGATCTAAGAGGCCGGAGATTCTAATCCACAACTTCACATACTATTGAAATTGGAAAAGAGAATTGCGATGGTAAAAGATGTTATCATGTTATCGGATTAAGAAAAGAAAACTGCCAAGGACTGTCAATGGTAAATTATGCAACCTTCAGTTTAACTGCTTAAATACTTTAGGAAGTCATTTCAAACATATTATAAATGAGTTGTTATGCCTGTAACAAGAGTCCTAAGCCACAATACTATTCTTTGGTGTGGAGAGGACTATGGAA

Coding sequence (CDS)

ATGAGATCGAAGTTGTGTGCATTCTCGCTTCTGGGTCGTACGTATTTCAGTTGGTCTTCTATTAAATACGCCCACCATGTCAATCTCAGAGCTCTTACCAGTGTTACCATGGCCTCTGGTTTTAGTTCGTGGCCTACGCGCATTCATACTGTTGACGCTGCCACTGTACCGAACTCCAATATTGGGAATTTCTTCTCATTTGGCTTTTGTTCTCATTCTTATGTTTCTTCAAGCTCAAACCACGATATTTTGAATGCAACTCCGGAAGAATCTTGTCACTATGCTGCCGATAATGATCATGAGAGTGGCGATGATCATGATAATCTAGAAGAATGTGAAGAAGAGGACATGGACATCAATGACGAGGGTGTGATAAAAGATGTTGATGCCATTATGGATATATTTCGTGGGTTCAGGAATGTAAATCGAATTGAAGTGAAAAATAAGCTTGAGCATTGCTTTATTAAGGTCTCAGGAGAGTTGGTAGTAGCAGTACTTTCTCGAATCCGTAATGATTGGGAAGCAGCTTTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATGCCCACTCTGTACGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGAAAGTTTGATACGGCATGGGCCTTGATTGATGAGATGAGAGGAGGGACGGCAGGCTCTTCGCTAGTGACACCTCAAACCCTTCTAATCATGATTAGGAGATACTGTGCTGTTCATGATGTTGCAAAAGCTATAAATACATTCCATGCTCATAAAAGATTCGGATTTAACATTGGACTAGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGATACAAAAATGTGAAAGATGCTGAATATTTGCTGTTTTGCAACAAAGATGTGTTCCCATTTAACACAAAGAGTTTCAATATTATCCTCAATGGATGGTGTATAATTGGGAGTCTTCGTGACACCGAGAGAGTTTGGAAGGAGATGACACGGAGAGGTATCAGTCATGATGCTATCTCATATGCAAGCTCCATTTCTTGTTATTCAAAAGTTCGCAACCTTCATAAGATAGATGAGGTACTACAAGCTTGGCTTGCTGGTAGGTCAATGTTTCAAGAGAACCCATCAGATTGTTCTGGGGAAGGCAAAAACTCCAGATTGTTCCCCGAAAAGGATTTTCACCGACAACCTGAGATTATAAAGGGTTCAAGAGATCGTGGTTTCTCATTCTGGAGGCAGTAG

Protein sequence

MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSNIGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDINDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLHKIDEVLQAWLAGRSMFQENPSDCSGEGKNSRLFPEKDFHRQPEIIKGSRDRGFSFWRQ
BLAST of MELO3C005984.2 vs. NCBI nr
Match: XP_008437826.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucumis melo] >XP_016898996.1 PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucumis melo])

HSP 1 Score: 753.8 bits (1945), Expect = 3.0e-214
Identity = 408/600 (68.00%), Postives = 408/600 (68.00%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN
Sbjct: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN 120
           IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN
Sbjct: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN 120

Query: 121 DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180
           DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF
Sbjct: 121 DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180

Query: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR 240
           VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR
Sbjct: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR 240

Query: 241 YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300
           YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT
Sbjct: 241 YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300

Query: 301 KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKV------------ 360
           KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKV            
Sbjct: 301 KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVXXXXXXXXXXXX 360

Query: 361 ------------------------------------------------------------ 411
                                                                       
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

BLAST of MELO3C005984.2 vs. NCBI nr
Match: XP_011650654.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucumis sativus] >KGN56380.1 hypothetical protein Csa_3G118150 [Cucumis sativus])

HSP 1 Score: 674.1 bits (1738), Expect = 3.0e-190
Identity = 367/601 (61.06%), Postives = 386/601 (64.23%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSKLCAFSLLGRTYFSWSS+KYAHHVN RALTS TMASGFS WPTRIHTVD ATV NSN
Sbjct: 1   MRSKLCAFSLLGRTYFSWSSVKYAHHVNHRALTSATMASGFSLWPTRIHTVDTATVSNSN 60

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN 120
           +G+ FS GFCSHSYVS SSNHDIL AT E+SCH+AA++DHES D HDNLEECEEEDMDIN
Sbjct: 61  VGDLFSLGFCSHSYVSPSSNHDILPATSEQSCHHAAESDHESDDXHDNLEECEEEDMDIN 120

Query: 121 DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180
           D+GVIKDVDAIMDIFRGFR+ NRI+V+NKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF
Sbjct: 121 DKGVIKDVDAIMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180

Query: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR 240
           VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTLLIMIRR
Sbjct: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRR 240

Query: 241 YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300
           YCAVHDVAKAINTF+AHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT
Sbjct: 241 YCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300

Query: 301 KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCY--------------- 360
           KSFNIILNGWC+IGSLRDTERVWKEMTRRGISHDA+SYAS ISCY               
Sbjct: 301 KSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYXXXXXXXXXXXXXXX 360

Query: 361 ------------------------------------------------------------ 411
                                                                       
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

BLAST of MELO3C005984.2 vs. NCBI nr
Match: XP_022145432.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia] >XP_022145440.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia] >XP_022145448.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momordica charantia])

HSP 1 Score: 551.2 bits (1419), Expect = 3.0e-153
Identity = 281/359 (78.27%), Postives = 306/359 (85.24%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSKL + S+LGRTYFSW S+K    V L ALTS TMAS FSS PTRI TVDAAT  N N
Sbjct: 6   MRSKLSSLSVLGRTYFSWYSVKSTQLVELGALTSPTMASDFSSRPTRIQTVDAATPTNPN 65

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEE----D 120
               FS GFCS SY+S SS  DILNA  EES  + A++D  SGDD+DN EE EE+     
Sbjct: 66  FRALFSSGFCSCSYISPSSKRDILNAPSEESSQHVANDDQVSGDDNDNGEEYEEDVNIKQ 125

Query: 121 MDINDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAA 180
           + I DEGVI+DVDAI+DI RGF +VNRI+VKNKLEHC IKVS ELVVAVLSR+RNDWEAA
Sbjct: 126 LSITDEGVIRDVDAIVDILRGFGDVNRIQVKNKLEHCRIKVSEELVVAVLSRVRNDWEAA 185

Query: 181 FTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLI 240
           FTFFVWA KQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGG  GSSLVTPQTLLI
Sbjct: 186 FTFFVWASKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGATGSSLVTPQTLLI 245

Query: 241 MIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVF 300
           MIR+YCAVHDV KAINTFHAHK+FGFN+GLEEFQ+LLSALCRYKNVKDAEYLLFCNKDVF
Sbjct: 246 MIRKYCAVHDVGKAINTFHAHKKFGFNVGLEEFQNLLSALCRYKNVKDAEYLLFCNKDVF 305

Query: 301 PFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLHKI 355
           PFNTKSFNIILNGWC IIGSLRD ER+WKEMT+RGISHDA+SYAS ISCYSK R+L+K+
Sbjct: 306 PFNTKSFNIILNGWCNIIGSLRDAERIWKEMTQRGISHDAVSYASIISCYSKARHLYKV 364

BLAST of MELO3C005984.2 vs. NCBI nr
Match: XP_022979235.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979236.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979237.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979238.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 532.7 bits (1371), Expect = 1.1e-147
Identity = 269/360 (74.72%), Postives = 293/360 (81.39%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSK CA SLL  T+FS SS+K   HV  RALTS T+ASGFSSWPTRIHTV   T  NSN
Sbjct: 6   MRSKFCALSLLSNTHFSCSSVKSTQHVVRRALTSATVASGFSSWPTRIHTVYPTTALNSN 65

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEE-----E 120
           +G+ FS GFCS  Y S  SN DILN   EE+                            E
Sbjct: 66  VGDLFSSGFCSRYYSSPGSNCDILNMPSEEAXXXXXXXXXXXXXXXXXXXXXXXXXMNIE 125

Query: 121 DMDINDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEA 180
            ++IND+GVI+DVDAIMDIFRGFRNV+RI+VKNKLEHC IKVSGELVV VLSRIRNDWEA
Sbjct: 126 QLNINDKGVIRDVDAIMDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVTVLSRIRNDWEA 185

Query: 181 AFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLL 240
           AFTFFVWAGKQPGY HS+REYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTL+
Sbjct: 186 AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLI 245

Query: 241 IMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300
           IMIRRYCAVHDV KAINTFHAHKRFGF +GLEEFQSLLSALCRYKNVKDAEYLLFCNKD 
Sbjct: 246 IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDA 305

Query: 301 FPFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLHKI 355
           FPFNTKSFNI+LNGWC IIGSLRD ER+W+EMT+RGI HDA+SYAS ISCYSK+RNL+++
Sbjct: 306 FPFNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRV 365

BLAST of MELO3C005984.2 vs. NCBI nr
Match: XP_023527396.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527397.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527398.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.1 bits (1333), Expect = 2.8e-143
Identity = 267/358 (74.58%), Postives = 285/358 (79.61%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSK CA SLL  TYFS SS+K   HV  RALT     SGFSSWPTR+HTV   T  NSN
Sbjct: 6   MRSKFCALSLLSHTYFSCSSVKSTQHVVRRALT-----SGFSSWPTRMHTVYPTTALNSN 65

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEE-----E 120
           +G+ FS GFCS  Y S  SN DILN   E                              E
Sbjct: 66  VGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIE 125

Query: 121 DMDINDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEA 180
            ++IND+GVI+DVDAIMDIFRGFRNV+RI+VKNKLEHC IKVSGELVVAVLSRIRNDWEA
Sbjct: 126 QLNINDKGVIRDVDAIMDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEA 185

Query: 181 AFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLL 240
           AFTFFVWAGKQPGY HS+REYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTLL
Sbjct: 186 AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLL 245

Query: 241 IMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300
           IMIRRYCAVHDV KAINTFHAHKRFGF +GLEEFQSLLSALCRYKNVKDAEYLLFCNKDV
Sbjct: 246 IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 305

Query: 301 FPFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLH 353
           FPFNTKSFNI+LNGWC  IGSLRD ER+W+EM +RGI HDA+SYAS ISCYSKVRNL+
Sbjct: 306 FPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLY 358

BLAST of MELO3C005984.2 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 321.2 bits (822), Expect = 9.0e-88
Identity = 163/262 (62.21%), Postives = 199/262 (75.95%), Query Frame = 0

Query: 98  NDHESGDDHDNLEECEEEDMD----INDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHC 157
           +  + G    N+E+ +E D+D    I+DE V +DV  I  + +   + +R E++NKLE C
Sbjct: 63  DSEQVGFTRSNIEKDDESDIDLGCSISDELVSEDVGKISKLVKDCGS-DRKELRNKLEEC 122

Query: 158 FIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAW 217
            +K S ELVV +LSR+RNDWE AFTFFVWAGKQ GY  SVREYHSMISILGKMRKFDTAW
Sbjct: 123 DVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAW 182

Query: 218 ALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLL 277
            LIDEMR      SLV  QTLLIMIR+YCAVHDV KAINTFHA+KRF   +G+++FQSLL
Sbjct: 183 TLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLL 242

Query: 278 SALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGIS 337
           SALCRYKNV DA +L+FCNKD +PF+ KSFNI+LNGWC +IGS R+ ERVW EM   G+ 
Sbjct: 243 SALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVK 302

Query: 338 HDAISYASSISCYSKVRNLHKI 355
           HD +SY+S ISCYSK  +L+K+
Sbjct: 303 HDVVSYSSMISCYSKGGSLNKV 321

BLAST of MELO3C005984.2 vs. TAIR10
Match: AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 7.8e-31
Identity = 68/207 (32.85%), Postives = 115/207 (55.56%), Query Frame = 0

Query: 120 NDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTF 179
           ND+   +    + +I +  R  +  ++K  L+ C I ++ ELV+ V++R R+DW+ A+  
Sbjct: 70  NDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYIL 129

Query: 180 FVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIR 239
                KQ  +  S   Y+ ++ +LGKMR+F+    + DEM   +     V  +T  +++ 
Sbjct: 130 SQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLN 189

Query: 240 RYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFN 299
           RY A H V +A+  F   K FG +  L  F  LL  LCRYK+V+ AE L    +  F  +
Sbjct: 190 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 249

Query: 300 TKSFNIILNGWCIIGSLRDTERVWKEM 327
            K+ N+ILNGWC++G++ + +R WK++
Sbjct: 250 IKAMNMILNGWCVLGNVHEAKRFWKDI 273

BLAST of MELO3C005984.2 vs. TAIR10
Match: AT1G80880.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-30
Identity = 76/239 (31.80%), Postives = 126/239 (52.72%), Query Frame = 0

Query: 115 EDMDINDEGVIKDVDAIMDIFRGFRNV-NRIEVKNKLEHCFIKVSGELVVAVLSRIRNDW 174
           E  DIN   +      ++D+ R    + +  +    LE     ++ +   +++  +R++W
Sbjct: 78  ETFDINLTALAPLEKGLIDLIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEW 137

Query: 175 EAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQT 234
             AF  F W  K+       +    MI +LG  +KF+ AW LI +M       S  T + 
Sbjct: 138 RLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDM----FNVSKDTRKA 197

Query: 235 LLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNK 294
           + +M+ RY A +D ++AI TF    +F      E FQ LL ALCR+ +++ AE  +  +K
Sbjct: 198 MFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK 257

Query: 295 DVFPFNTKSFNIILNGWCIIGS-LRDTERVWKEMTRRGISHDAISYASSISCYSKVRNL 352
            +FP + + FN+ILNGWC I + + + +R+W+EM    I+ +  SY+  ISC+SKV NL
Sbjct: 258 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310

BLAST of MELO3C005984.2 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 8.6e-30
Identity = 71/205 (34.63%), Postives = 108/205 (52.68%), Query Frame = 0

Query: 127 DVDAIMDIFRGFRN-VNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGK 186
           DV+    I R F + V ++E+   L    +++   L+  VL+R  +     + FFVWA K
Sbjct: 82  DVEKSYRILRKFHSRVPKLEL--ALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAK 141

Query: 187 QPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVH 246
           QP Y HS+  Y SM+ IL KMR+F   W LI+EMR       L+ P+  +++++R+ +  
Sbjct: 142 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASAD 201

Query: 247 DVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNI 306
            V KAI       +FGF      F  LL ALC++ +VKDA  L    +  FP N + F  
Sbjct: 202 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTS 261

Query: 307 ILNGWCIIGSLRDTERVWKEMTRRG 331
           +L GWC +G + + + V  +M   G
Sbjct: 262 LLYGWCRVGKMMEAKYVLVQMNEAG 282

BLAST of MELO3C005984.2 vs. TAIR10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 4.0e-27
Identity = 79/228 (34.65%), Postives = 124/228 (54.39%), Query Frame = 0

Query: 89  EESCHYAADNDHESGDDHDNLEECEEEDMDINDEGVIKDVDAIMDIFRGFRNVNRIEVKN 148
           +E      DND E+G        C E     N E V +    I ++F   RN+  +  + 
Sbjct: 103 DEEVESECDNDEETG------VSCVES--STNPEEVERVCKVIDELFALDRNMEAVLDEM 162

Query: 149 KLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRK 208
           KL+     +S +L+V VL R R+  + AF FF WA ++ G+AH  R Y+SM+SIL K R+
Sbjct: 163 KLD-----LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQ 222

Query: 209 FDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEE 268
           F+T  ++++EM  GT G  L+T +T  I ++ + A  +  KA+  F   K++ F IG+E 
Sbjct: 223 FETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 282

Query: 269 FQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCIIGSL 317
              LL +L R K  K+A+ L    K+ F  N  ++ ++LNGWC + +L
Sbjct: 283 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313

BLAST of MELO3C005984.2 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 321.2 bits (822), Expect = 1.6e-86
Identity = 163/262 (62.21%), Postives = 199/262 (75.95%), Query Frame = 0

Query: 98  NDHESGDDHDNLEECEEEDMD----INDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHC 157
           +  + G    N+E+ +E D+D    I+DE V +DV  I  + +   + +R E++NKLE C
Sbjct: 63  DSEQVGFTRSNIEKDDESDIDLGCSISDELVSEDVGKISKLVKDCGS-DRKELRNKLEEC 122

Query: 158 FIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAW 217
            +K S ELVV +LSR+RNDWE AFTFFVWAGKQ GY  SVREYHSMISILGKMRKFDTAW
Sbjct: 123 DVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAW 182

Query: 218 ALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLL 277
            LIDEMR      SLV  QTLLIMIR+YCAVHDV KAINTFHA+KRF   +G+++FQSLL
Sbjct: 183 TLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLL 242

Query: 278 SALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGIS 337
           SALCRYKNV DA +L+FCNKD +PF+ KSFNI+LNGWC +IGS R+ ERVW EM   G+ 
Sbjct: 243 SALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVK 302

Query: 338 HDAISYASSISCYSKVRNLHKI 355
           HD +SY+S ISCYSK  +L+K+
Sbjct: 303 HDVVSYSSMISCYSKGGSLNKV 321

BLAST of MELO3C005984.2 vs. Swiss-Prot
Match: sp|Q9LIL5|PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.4e-29
Identity = 68/207 (32.85%), Postives = 115/207 (55.56%), Query Frame = 0

Query: 120 NDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTF 179
           ND+   +    + +I +  R  +  ++K  L+ C I ++ ELV+ V++R R+DW+ A+  
Sbjct: 70  NDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYIL 129

Query: 180 FVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIR 239
                KQ  +  S   Y+ ++ +LGKMR+F+    + DEM   +     V  +T  +++ 
Sbjct: 130 SQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLN 189

Query: 240 RYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFN 299
           RY A H V +A+  F   K FG +  L  F  LL  LCRYK+V+ AE L    +  F  +
Sbjct: 190 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 249

Query: 300 TKSFNIILNGWCIIGSLRDTERVWKEM 327
            K+ N+ILNGWC++G++ + +R WK++
Sbjct: 250 IKAMNMILNGWCVLGNVHEAKRFWKDI 273

BLAST of MELO3C005984.2 vs. Swiss-Prot
Match: sp|Q9SAH2|PP137_ARATH (Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80880 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.2e-28
Identity = 76/239 (31.80%), Postives = 126/239 (52.72%), Query Frame = 0

Query: 115 EDMDINDEGVIKDVDAIMDIFRGFRNV-NRIEVKNKLEHCFIKVSGELVVAVLSRIRNDW 174
           E  DIN   +      ++D+ R    + +  +    LE     ++ +   +++  +R++W
Sbjct: 78  ETFDINLTALAPLEKGLIDLIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEW 137

Query: 175 EAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQT 234
             AF  F W  K+       +    MI +LG  +KF+ AW LI +M       S  T + 
Sbjct: 138 RLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDM----FNVSKDTRKA 197

Query: 235 LLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNK 294
           + +M+ RY A +D ++AI TF    +F      E FQ LL ALCR+ +++ AE  +  +K
Sbjct: 198 MFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK 257

Query: 295 DVFPFNTKSFNIILNGWCIIGS-LRDTERVWKEMTRRGISHDAISYASSISCYSKVRNL 352
            +FP + + FN+ILNGWC I + + + +R+W+EM    I+ +  SY+  ISC+SKV NL
Sbjct: 258 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310

BLAST of MELO3C005984.2 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-28
Identity = 71/205 (34.63%), Postives = 108/205 (52.68%), Query Frame = 0

Query: 127 DVDAIMDIFRGFRN-VNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGK 186
           DV+    I R F + V ++E+   L    +++   L+  VL+R  +     + FFVWA K
Sbjct: 82  DVEKSYRILRKFHSRVPKLEL--ALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAK 141

Query: 187 QPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVH 246
           QP Y HS+  Y SM+ IL KMR+F   W LI+EMR       L+ P+  +++++R+ +  
Sbjct: 142 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASAD 201

Query: 247 DVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNI 306
            V KAI       +FGF      F  LL ALC++ +VKDA  L    +  FP N + F  
Sbjct: 202 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTS 261

Query: 307 ILNGWCIIGSLRDTERVWKEMTRRG 331
           +L GWC +G + + + V  +M   G
Sbjct: 262 LLYGWCRVGKMMEAKYVLVQMNEAG 282

BLAST of MELO3C005984.2 vs. Swiss-Prot
Match: sp|Q9LEQ7|PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.2e-26
Identity = 79/228 (34.65%), Postives = 124/228 (54.39%), Query Frame = 0

Query: 89  EESCHYAADNDHESGDDHDNLEECEEEDMDINDEGVIKDVDAIMDIFRGFRNVNRIEVKN 148
           +E      DND E+G        C E     N E V +    I ++F   RN+  +  + 
Sbjct: 103 DEEVESECDNDEETG------VSCVES--STNPEEVERVCKVIDELFALDRNMEAVLDEM 162

Query: 149 KLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRK 208
           KL+     +S +L+V VL R R+  + AF FF WA ++ G+AH  R Y+SM+SIL K R+
Sbjct: 163 KLD-----LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQ 222

Query: 209 FDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEE 268
           F+T  ++++EM  GT G  L+T +T  I ++ + A  +  KA+  F   K++ F IG+E 
Sbjct: 223 FETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 282

Query: 269 FQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCIIGSL 317
              LL +L R K  K+A+ L    K+ F  N  ++ ++LNGWC + +L
Sbjct: 283 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313

BLAST of MELO3C005984.2 vs. TrEMBL
Match: tr|A0A1S3AUX2|A0A1S3AUX2_CUCME (pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483141 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 2.0e-214
Identity = 408/600 (68.00%), Postives = 408/600 (68.00%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN
Sbjct: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN 120
           IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN
Sbjct: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN 120

Query: 121 DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180
           DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF
Sbjct: 121 DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180

Query: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR 240
           VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR
Sbjct: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR 240

Query: 241 YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300
           YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT
Sbjct: 241 YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300

Query: 301 KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKV------------ 360
           KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKV            
Sbjct: 301 KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVXXXXXXXXXXXX 360

Query: 361 ------------------------------------------------------------ 411
                                                                       
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

BLAST of MELO3C005984.2 vs. TrEMBL
Match: tr|A0A0A0L308|A0A0A0L308_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118150 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 2.0e-190
Identity = 367/601 (61.06%), Postives = 386/601 (64.23%), Query Frame = 0

Query: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60
           MRSKLCAFSLLGRTYFSWSS+KYAHHVN RALTS TMASGFS WPTRIHTVD ATV NSN
Sbjct: 1   MRSKLCAFSLLGRTYFSWSSVKYAHHVNHRALTSATMASGFSLWPTRIHTVDTATVSNSN 60

Query: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEEEDMDIN 120
           +G+ FS GFCSHSYVS SSNHDIL AT E+SCH+AA++DHES D HDNLEECEEEDMDIN
Sbjct: 61  VGDLFSLGFCSHSYVSPSSNHDILPATSEQSCHHAAESDHESDDXHDNLEECEEEDMDIN 120

Query: 121 DEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180
           D+GVIKDVDAIMDIFRGFR+ NRI+V+NKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF
Sbjct: 121 DKGVIKDVDAIMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFF 180

Query: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRR 240
           VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTLLIMIRR
Sbjct: 181 VWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRR 240

Query: 241 YCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300
           YCAVHDVAKAINTF+AHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT
Sbjct: 241 YCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 300

Query: 301 KSFNIILNGWCIIGSLRDTERVWKEMTRRGISHDAISYASSISCY--------------- 360
           KSFNIILNGWC+IGSLRDTERVWKEMTRRGISHDA+SYAS ISCY               
Sbjct: 301 KSFNIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYXXXXXXXXXXXXXXX 360

Query: 361 ------------------------------------------------------------ 411
                                                                       
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

BLAST of MELO3C005984.2 vs. TrEMBL
Match: tr|A0A061F1G5|A0A061F1G5_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_026033 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.1e-99
Identity = 176/231 (76.19%), Postives = 201/231 (87.01%), Query Frame = 0

Query: 125 IKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAG 184
           ++D  AIMDI R     N +E+KNKLEHC I+VS ELVV +LSRIRNDWE AFTFF+WAG
Sbjct: 111 VQDGKAIMDIIRE-TGSNYVEMKNKLEHCRIRVSSELVVEILSRIRNDWEVAFTFFLWAG 170

Query: 185 KQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAV 244
           KQPGYAHS+RE HSMISILGKMRKFDTAWALIDEMRGG AG  LVTPQTLLIMIRRYCAV
Sbjct: 171 KQPGYAHSLRECHSMISILGKMRKFDTAWALIDEMRGGRAGPCLVTPQTLLIMIRRYCAV 230

Query: 245 HDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFN 304
           HDV +AINTF+A+K+F F++G+EEFQSLLSALCRYKNV+DAE+L+FCNKDVFPFN KSFN
Sbjct: 231 HDVGRAINTFYAYKKFKFDVGIEEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNIKSFN 290

Query: 305 IILNGWC-IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLHKI 355
           IILNGWC  IGS R  ERVW+EM++RG+ HD +SYAS +SCYSK  NLHK+
Sbjct: 291 IILNGWCNAIGSPRQAERVWREMSKRGVQHDVVSYASVMSCYSKACNLHKV 340

BLAST of MELO3C005984.2 vs. TrEMBL
Match: tr|B9SHK0|B9SHK0_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1122470 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.2e-98
Identity = 171/239 (71.55%), Postives = 207/239 (86.61%), Query Frame = 0

Query: 117 MDINDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEAA 176
           +++ DEG+++DV  IM I       N +E+KNK+EHC +KVS ELV+ VLSRIRNDWEAA
Sbjct: 86  LNLKDEGLVQDVTIIMSILHQLSG-NPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAA 145

Query: 177 FTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLLI 236
           FTFF+WAG+Q GY+HSVREYH+MISILGKMRKFDTAWALIDEMRG   G SLVTPQTLLI
Sbjct: 146 FTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQTLLI 205

Query: 237 MIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVF 296
           MIR+YCAVHDV +AINTF+AHKRF F++G++EFQSLLSALCRYKNV+DAE+L+FCNKDVF
Sbjct: 206 MIRKYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVF 265

Query: 297 PFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVRNLHKI 355
           PFNTKSFNI+LNGWC +IGS R+ +R+W+EM +R I +D +SYAS ISCYSK  NL+K+
Sbjct: 266 PFNTKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKV 323

BLAST of MELO3C005984.2 vs. TrEMBL
Match: tr|A0A2H5QN55|A0A2H5QN55_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_245560 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.9e-98
Identity = 192/328 (58.54%), Postives = 240/328 (73.17%), Query Frame = 0

Query: 28  NLRALTSVTMASGFSSWPTRIHTVDAATVPNSNIGNFFSFGFCSHSYVSSSSNHDILNAT 87
           NL  +TS+     FS+  T+      + +  +      +F F  H    S+SN + LNA 
Sbjct: 10  NLSRITSLARFL-FSAAYTKPSEFSTSVIKTNVFTPTNNFTFPFHFSSCSTSNLETLNA- 69

Query: 88  PEESCHYAADNDHESGDDHDNLEECEEEDMDINDEGVIKDVDAIMDIFRGFRNVNRIEVK 147
           P+ S     D      DD +++   + + + I+DEGV+KD   ++DI R F +  R E++
Sbjct: 70  PKISILDEKDCSGSDNDDEEDIVATDVKQLKISDEGVLKDAKTLVDILREFSH-RRSEMR 129

Query: 148 NKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMR 207
           NK+E C IKVS ELV  VLS +RNDWEAAFTFF+WAGKQ GYAHS REYH+MI+ILGK+R
Sbjct: 130 NKIEECGIKVSSELVSEVLSWVRNDWEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVR 189

Query: 208 KFDTAWALIDEMRGGTAGSSLVTPQTLLIMIRRYCAVHDVAKAINTFHAHKRFGFNIGLE 267
           KFDTAWALIDEMRGG  G SLVT QTLLI+IRRYCAVHDV +AIN F+A+KRF F +G+E
Sbjct: 190 KFDTAWALIDEMRGGETGPSLVTKQTLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIE 249

Query: 268 EFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWC-IIGSLRDTERVWKEM 327
           +FQ LLSALCRYKNV+DAE+L+FCNKDVFPFNTKSFNIILNGWC IIGS R+ ERVW EM
Sbjct: 250 DFQGLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEM 309

Query: 328 TRRGISHDAISYASSISCYSKVRNLHKI 355
           ++RGI +D +S++  ISCYSK RNLHK+
Sbjct: 310 SQRGICYDVVSFSCIISCYSKARNLHKV 334

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008437826.13.0e-21468.00PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial ... [more]
XP_011650654.13.0e-19061.06PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial ... [more]
XP_022145432.13.0e-15378.27pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Momor... [more]
XP_022979235.11.1e-14774.72pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ... [more]
XP_023527396.12.8e-14374.58pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT5G15010.19.0e-8862.21Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G15200.17.8e-3132.85Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G80880.16.6e-3031.80Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65820.18.6e-3034.63Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.14.0e-2734.65Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9LFQ4|PP383_ARATH1.6e-8662.21Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
sp|Q9LIL5|PP233_ARATH1.4e-2932.85Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... [more]
sp|Q9SAH2|PP137_ARATH1.2e-2831.80Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidop... [more]
sp|Q9FH87|PP447_ARATH1.5e-2834.63Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
sp|Q9LEQ7|PP382_ARATH7.2e-2634.65Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3AUX2|A0A1S3AUX2_CUCME2.0e-21468.00pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucumis ... [more]
tr|A0A0A0L308|A0A0A0L308_CUCSA2.0e-19061.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118150 PE=4 SV=1[more]
tr|A0A061F1G5|A0A061F1G5_THECC2.1e-9976.19Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao OX=3641... [more]
tr|B9SHK0|B9SHK0_RICCO5.2e-9871.55Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis OX=398... [more]
tr|A0A2H5QN55|A0A2H5QN55_CITUN8.9e-9858.54Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_245560 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005984.2.1MELO3C005984.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 302..334
e-value: 4.2E-5
score: 21.4
coord: 196..220
e-value: 5.7E-4
score: 17.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 302..331
e-value: 0.012
score: 15.7
coord: 196..220
e-value: 0.0076
score: 16.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 10.041
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 192..222
score: 7.75
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..364
score: 5.514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 6.522
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 140..285
e-value: 2.1E-16
score: 61.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 290..383
e-value: 1.5E-9
score: 39.9
NoneNo IPR availablePANTHERPTHR24015:SF227SUBFAMILY NOT NAMEDcoord: 58..352
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 58..352