MELO3C005533 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005533
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionArginine N-methyltransferase family protein
Locationchr9 : 21098097 .. 21098460 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTCTTTCAGGTTAAGGTAACCAAGGCTGGAATATGTCATGGAATTGTACTGTGGATTGATTGGGTAATAGATTCAAAGAACTCCATTGTCATATCCACAGGTCCAGGTACCAACCTTCAATGTCTAAAGAAATTTCTAATACTGACATTGTTTTGCTTGTGATTTAACTGCTTCTCATTTCATGTTGTAAACTGATTCAGATAAAAGATACTGGAAGCAAGGAGTTAAGCTTCTTGCTGACCCCGTGGCAGTTGAACCTCGAGATTCTGGTGAGGGCATCGAATGCTGCTCTGCTGCCATTGAAGCATCTTTTGATCCATCAACTGGTGAACTTGACTTACGACATTCTTTTCTGTAA

mRNA sequence

ATGTTTTTCTTTCAGGTTAAGGTAACCAAGGCTGGAATATGTCATGGAATTGTACTGTGGATTGATTGGGTAATAGATTCAAAGAACTCCATTGTCATATCCACAGGTCCAGATAAAAGATACTGGAAGCAAGGAGTTAAGCTTCTTGCTGACCCCGTGGCAGTTGAACCTCGAGATTCTGGTGAGGGCATCGAATGCTGCTCTGCTGCCATTGAAGCATCTTTTGATCCATCAACTGGTGAACTTGACTTACGACATTCTTTTCTGTAA

Coding sequence (CDS)

ATGTTTTTCTTTCAGGTTAAGGTAACCAAGGCTGGAATATGTCATGGAATTGTACTGTGGATTGATTGGGTAATAGATTCAAAGAACTCCATTGTCATATCCACAGGTCCAGATAAAAGATACTGGAAGCAAGGAGTTAAGCTTCTTGCTGACCCCGTGGCAGTTGAACCTCGAGATTCTGGTGAGGGCATCGAATGCTGCTCTGCTGCCATTGAAGCATCTTTTGATCCATCAACTGGTGAACTTGACTTACGACATTCTTTTCTGTAA

Protein sequence

MFFFQVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGIECCSAAIEASFDPSTGELDLRHSFL*
Homology
[Close]
BLAST of MELO3C005533 vs. Swiss-Prot
Match: ANM7_ORYSJ (Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. japonica GN=PRMT7 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-17
Identity = 40/83 (48.19%), Postives = 52/83 (62.65%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           +++ +  G CHG  +WIDWV+D + S+V++TGPD RYWKQGV+L + PV V P  S    
Sbjct: 640 KIEFSHDGTCHGFAVWIDWVLDERKSVVLTTGPDNRYWKQGVQLFSKPVEVNPGKS---- 699

Query: 65  ECCSAAIEASFDPSTGELDLRHS 88
                 +EASFDPSTGE+    S
Sbjct: 700 ---VMHVEASFDPSTGEITFSSS 715

[Close]
BLAST of MELO3C005533 vs. Swiss-Prot
Match: ANM7_ORYSI (Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. indica GN=PRMT7 PE=3 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 2.9e-17
Identity = 40/83 (48.19%), Postives = 51/83 (61.45%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           +++ +  G CHG  +WIDWV+D + S+V++TGPD RYWKQGV+L   PV V P  S    
Sbjct: 640 KIEFSHDGTCHGFAVWIDWVLDERKSVVLTTGPDNRYWKQGVQLFGKPVEVNPGKS---- 699

Query: 65  ECCSAAIEASFDPSTGELDLRHS 88
                 +EASFDPSTGE+    S
Sbjct: 700 ---VMHVEASFDPSTGEITFSSS 715

[Close]
BLAST of MELO3C005533 vs. Swiss-Prot
Match: ANM16_ARATH (Protein arginine N-methyltransferase 1.6 OS=Arabidopsis thaliana GN=PRMT16 PE=2 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-16
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           Q++  K G+CHGI LW+DWV+D +NS VISTGPD +YWKQGVKLL  PV V        I
Sbjct: 644 QIEFIKPGVCHGIALWMDWVMDEENSTVISTGPDDKYWKQGVKLLGKPVTVRMEGPSSSI 703

Query: 65  ECCSAAIEASFD-PSTGELDLRHS 88
                 I+AS D  S  EL + H+
Sbjct: 704 -----GIQASLDLSSNSELIVTHT 722

[Close]
BLAST of MELO3C005533 vs. TrEMBL
Match: A0A0A0KRA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162000 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-40
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QVKVTKAGICHGIVLWIDW+IDSKNSIVISTGPDKRYWKQGVKLLADPVAV PRDSGEGI
Sbjct: 654 QVKVTKAGICHGIVLWIDWLIDSKNSIVISTGPDKRYWKQGVKLLADPVAVGPRDSGEGI 713

Query: 65  ECCSAAIEASFDPSTGELDLRHSFL 90
           ECCSAAIEASFDPSTGEL+LRHSFL
Sbjct: 714 ECCSAAIEASFDPSTGELELRHSFL 738

[Close]
BLAST of MELO3C005533 vs. TrEMBL
Match: A0A067FE13_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0442452mg PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.2e-26
Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QV+ T+ G+CHG  LWIDWV+DS+NSIVISTGPDKRYWKQGVKL+A PVAV   +SG   
Sbjct: 210 QVEFTEPGLCHGFALWIDWVLDSENSIVISTGPDKRYWKQGVKLMAKPVAVGFEESGRTD 269

Query: 65  ECCSAAIEASFDPSTGELDLRHSF 89
            C S  +EASFDPS GEL+++H+F
Sbjct: 270 LCSSTLVEASFDPSNGELNVQHTF 293

[Close]
BLAST of MELO3C005533 vs. TrEMBL
Match: B9GYA9_POPTR (Arginine N-methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0003s07410g PE=3 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-25
Identity = 55/82 (67.07%), Postives = 68/82 (82.93%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QV+ T+ G+CHG VLWIDWV+D+KNS+V++TGPD+RYWKQGVKLL+ PVAV  R S  G 
Sbjct: 657 QVEFTEQGMCHGFVLWIDWVMDAKNSVVLTTGPDERYWKQGVKLLSQPVAVGGRGSSTG- 716

Query: 65  ECCSAAIEASFDPSTGELDLRH 87
            CCS  IEASFDPS+GEL ++H
Sbjct: 717 NCCSTLIEASFDPSSGELAVKH 737

[Close]
BLAST of MELO3C005533 vs. TrEMBL
Match: V4TJI5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023597mg PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-24
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QV+ T+ G+CHG  LWIDWV+DS+NSI+ISTGPDKRYWKQGVKL+A PVAV    SG   
Sbjct: 598 QVEFTELGLCHGFALWIDWVMDSENSIIISTGPDKRYWKQGVKLMAKPVAVGFEGSGRTD 657

Query: 65  ECCSAAIEASFDPSTGELDLRHSF 89
            C S  +EASF+PS GEL+++H+F
Sbjct: 658 LCSSTLVEASFNPSNGELNVQHTF 681

[Close]
BLAST of MELO3C005533 vs. TrEMBL
Match: B9SSF6_RICCO (Protein arginine n-methyltransferase, putative OS=Ricinus communis GN=RCOM_1060990 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-23
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QVK T+ G+CHG  LWIDWV+D+K+S+V+S GPD RYWKQGVKLLA PV V   +S  G 
Sbjct: 614 QVKFTEPGMCHGFALWIDWVMDAKHSVVLSAGPDHRYWKQGVKLLAHPVLVAGPESTGG- 673

Query: 65  ECCSAAIEASFDPSTGELDLRHSF 89
           +CCSA IEASFD S GEL + H+F
Sbjct: 674 DCCSAVIEASFDASNGELTINHAF 696

[Close]
BLAST of MELO3C005533 vs. TAIR10
Match: AT4G16570.1 (AT4G16570.1 protein arginine methyltransferase 7)

HSP 1 Score: 86.7 bits (213), Expect = 8.2e-18
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           Q++  K G+CHGI LW+DWV+D +NS VISTGPD +YWKQGVKLL  PV V        I
Sbjct: 644 QIEFIKPGVCHGIALWMDWVMDEENSTVISTGPDDKYWKQGVKLLGKPVTVRMEGPSSSI 703

Query: 65  ECCSAAIEASFD-PSTGELDLRHS 88
                 I+AS D  S  EL + H+
Sbjct: 704 -----GIQASLDLSSNSELIVTHT 722

[Close]
BLAST of MELO3C005533 vs. NCBI nr
Match: gi|659073479|ref|XP_008437081.1| (PREDICTED: protein arginine N-methyltransferase 1.6 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 4.5e-42
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI
Sbjct: 654 QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 713

Query: 65  ECCSAAIEASFDPSTGELDLRHSFL 90
           ECCSAAIEASFDPSTGELDLRHSFL
Sbjct: 714 ECCSAAIEASFDPSTGELDLRHSFL 738

[Close]
BLAST of MELO3C005533 vs. NCBI nr
Match: gi|449469390|ref|XP_004152403.1| (PREDICTED: protein arginine N-methyltransferase 1.6 isoform X1 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-40
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QVKVTKAGICHGIVLWIDW+IDSKNSIVISTGPDKRYWKQGVKLLADPVAV PRDSGEGI
Sbjct: 654 QVKVTKAGICHGIVLWIDWLIDSKNSIVISTGPDKRYWKQGVKLLADPVAVGPRDSGEGI 713

Query: 65  ECCSAAIEASFDPSTGELDLRHSFL 90
           ECCSAAIEASFDPSTGEL+LRHSFL
Sbjct: 714 ECCSAAIEASFDPSTGELELRHSFL 738

[Close]
BLAST of MELO3C005533 vs. NCBI nr
Match: gi|778700057|ref|XP_011654801.1| (PREDICTED: protein arginine N-methyltransferase 1.6 isoform X2 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-40
Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QVKVTKAGICHGIVLWIDW+IDSKNSIVISTGPDKRYWKQGVKLLADPVAV PRDSGEGI
Sbjct: 477 QVKVTKAGICHGIVLWIDWLIDSKNSIVISTGPDKRYWKQGVKLLADPVAVGPRDSGEGI 536

Query: 65  ECCSAAIEASFDPSTGELDLRHSFL 90
           ECCSAAIEASFDPSTGEL+LRHSFL
Sbjct: 537 ECCSAAIEASFDPSTGELELRHSFL 561

[Close]
BLAST of MELO3C005533 vs. NCBI nr
Match: gi|502181507|ref|XP_004516820.1| (PREDICTED: protein arginine N-methyltransferase 1.6 [Cicer arietinum])

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-26
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QV  TK G+CHG VLWIDWV+DS+NS+VISTGPDKRYWKQG+KLLA P  VEP+ S    
Sbjct: 638 QVTFTKTGVCHGFVLWIDWVMDSQNSVVISTGPDKRYWKQGIKLLATPRTVEPQGSTNVE 697

Query: 65  ECCSAAIEASFDPSTGELDLRHSF 89
            CCSA +EA FDPS GEL + H F
Sbjct: 698 ACCSADLEAFFDPSNGELKIIHDF 721

[Close]
BLAST of MELO3C005533 vs. NCBI nr
Match: gi|985446869|ref|XP_015385349.1| (PREDICTED: protein arginine N-methyltransferase 1.6 isoform X1 [Citrus sinensis])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-25
Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 1 

Query: 5   QVKVTKAGICHGIVLWIDWVIDSKNSIVISTGPDKRYWKQGVKLLADPVAVEPRDSGEGI 64
           QV+ T+ G+CHG  LWIDWV+DS+NSIVISTGPDKRYWKQGVKL+A PVAV   +SG   
Sbjct: 652 QVEFTEPGLCHGFALWIDWVLDSENSIVISTGPDKRYWKQGVKLMAKPVAVGFEESGRTD 711

Query: 65  ECCSAAIEASFDPSTGELDLRHSF 89
            C S  +EASFDPS GEL+++H+F
Sbjct: 712 LCSSTLVEASFDPSNGELNVQHTF 735

The following BLAST results are available for this feature:
BLAST of MELO3C005533 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ANM7_ORYSJ2.2e-1748.19Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. japonica GN=PRMT7 ... [more]
ANM7_ORYSI2.9e-1748.19Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. indica GN=PRMT7 PE... [more]
ANM16_ARATH1.5e-1651.19Protein arginine N-methyltransferase 1.6 OS=Arabidopsis thaliana GN=PRMT16 PE=2 ... [more]
BLAST of MELO3C005533 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRA0_CUCSA1.3e-4096.47Uncharacterized protein OS=Cucumis sativus GN=Csa_5G162000 PE=3 SV=1[more]
A0A067FE13_CITSI9.2e-2666.67Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0442452mg PE=3 ... [more]
B9GYA9_POPTR3.5e-2567.07Arginine N-methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0003... [more]
V4TJI5_9ROSI1.3e-2464.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023597mg PE=3 SV=1[more]
B9SSF6_RICCO1.1e-2364.29Protein arginine n-methyltransferase, putative OS=Ricinus communis GN=RCOM_10609... [more]
BLAST of MELO3C005533 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16570.18.2e-1851.19 protein arginine methyltransferase 7[more]
BLAST of MELO3C005533 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073479|ref|XP_008437081.1|4.5e-42100.00PREDICTED: protein arginine N-methyltransferase 1.6 [Cucumis melo][more]
gi|449469390|ref|XP_004152403.1|1.9e-4096.47PREDICTED: protein arginine N-methyltransferase 1.6 isoform X1 [Cucumis sativus][more]
gi|778700057|ref|XP_011654801.1|1.9e-4096.47PREDICTED: protein arginine N-methyltransferase 1.6 isoform X2 [Cucumis sativus][more]
gi|502181507|ref|XP_004516820.1|3.5e-2667.86PREDICTED: protein arginine N-methyltransferase 1.6 [Cicer arietinum][more]
gi|985446869|ref|XP_015385349.1|1.3e-2566.67PREDICTED: protein arginine N-methyltransferase 1.6 isoform X1 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006479 protein methylation
biological_process GO:0034969 histone arginine methylation
biological_process GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
molecular_function GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005533T1MELO3C005533T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.70.160.11coord: 4..62
score: 5.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005533Csa5G162000Cucumber (Chinese Long) v2cumeB357
MELO3C005533Cla011584Watermelon (97103) v1mewmB029
MELO3C005533ClCG01G004030Watermelon (Charleston Gray)mewcgB018
MELO3C005533Cla97C01G004210Watermelon (97103) v2mewmbB008
MELO3C005533Bhi12G000416Wax gourdmewgoB014
MELO3C005533CSPI05G06810Wild cucumber (PI 183967)cpimeB348
MELO3C005533Cucsa.301830Cucumber (Gy14) v1cgymeB495
MELO3C005533CmaCh15G011230Cucurbita maxima (Rimu)cmameB250
MELO3C005533CmoCh15G011830Cucurbita moschata (Rifu)cmomeB238
MELO3C005533Lsi09G004230Bottle gourd (USVL1VR-Ls)lsimeB012
MELO3C005533Cp4.1LG13g02300Cucurbita pepo (Zucchini)cpemeB156
MELO3C005533CsGy5G004170Cucumber (Gy14) v2cgybmeB298
MELO3C005533CsaV3_5G004210Cucumber (Chinese Long) v3cucmeB357
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005533Silver-seed gourdcarmeB0547
MELO3C005533Silver-seed gourdcarmeB0905
MELO3C005533Watermelon (97103) v2mewmbB012
MELO3C005533Melon (DHL92) v3.5.1memeB017
MELO3C005533Cucumber (Gy14) v1cgymeB530
MELO3C005533Cucurbita maxima (Rimu)cmameB528
MELO3C005533Cucurbita maxima (Rimu)cmameB530
MELO3C005533Cucurbita maxima (Rimu)cmameB746
MELO3C005533Cucurbita moschata (Rifu)cmomeB517
MELO3C005533Cucurbita moschata (Rifu)cmomeB519
MELO3C005533Cucurbita moschata (Rifu)cmomeB736
MELO3C005533Cucumber (Chinese Long) v2cumeB171
MELO3C005533Watermelon (Charleston Gray)mewcgB005
MELO3C005533Cucurbita pepo (Zucchini)cpemeB647
MELO3C005533Cucurbita pepo (Zucchini)cpemeB652
MELO3C005533Cucurbita pepo (Zucchini)cpemeB790
MELO3C005533Bottle gourd (USVL1VR-Ls)lsimeB426
MELO3C005533Cucumber (Gy14) v2cgybmeB139