MELO3C005421 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005421
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	General transcription factor IIH subunit 2
Location	chr9 : 20306984 .. 20313097 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCATCTCTTCAATTTCACCGTTTTTCTCTATCTAAAAAGTAAACGAATCAAACAAACTTCAAACTGTTTTTCTCTTCATTCTTTCGTACTTAGACTCAGAGATCGGGAGCAGTTAAATCCACAAATCGGAAGAACATGGGTCAAGCTTTTCCCGAACTCTTCGACTCATTTTTTGGCAACTCCGAGATGCGGGTATCATATATTCTTCTTTATTTTTGTTTTATAAATTATTTTCTACCATTGGATTTCATACCCTTATGTGCCCATTTGATTTTGTTCATTAAATATGCAACTTCTTGATTTATTCCCCCCTATTCCGCTGTTCAATCTGTCCCACGGTTGCATTGATATGTCTTCGTAATGCTGATTTCTTCTGATTGTAGGATTTTCTTAACTTATTGTACCCAGGTGCATTAATATGTCTTGCTAATGTTGATGTTTAATTTGAGATGGAGGTCTCAGTCGAACTCTCTGGTCAAAGTGTTACTTCGATGTTGTTCTCTGATAAGAAACTGGGGATTACATTGCAAAAGAAAACAAAATCACAGCCTAAGGGCAGGGGTAGAGGAAACTCTCTCCCAACAAAACTATACAAGAAGAGCCTCCCAATTGTTAATAATCATAAGAAGACGGTAGTTCCAAAAGAATTTAGTGTAATTTGTACCCCACCAAGAGGCTGTATGCTGCACAAGAACCCAAGAAGAATCACAAGAAGTAAACTCATCTTCAAAGATTCTACCATTCCTCTTCTTCCAAAGATGCCATAAAAGCACCCGGGAAGTGCAGCTCCAAAGGATTTTTCCTTTTCCATGAAAATTTCTACCATTTAGACTATCCATCATCTAGTCATTGACCTTCTTCGGAAGGCAACTTTTCAACCCAAAAGTATCAAGGAGATCGTTCCACCCTCTTGCAGTGAAAATGACTTTGAGATCCAGTCATTGATGTTGGTCTATGAATCAGATATACTTTACAATTTGACTTTGACAAGGAGTCAGTCTCACCAGCTATTGATTGGTTGCACATATCTTACATTATAGAGAAAATGGTCCACTTGTGTCCCAATTTTGATGGTAGGTGTTAATTTACAACCGTACTTGAATATGATTTGGTCTATTCTATGAGCTGTACAATTGCGTCCTCGAGTTCCAAGTGGTAGATGTTAATTTGTTGTTCTCTGCAAATCATGATTGATTTATAGGCATAAAATTTGACATTGCCATACAACCCAAGGAAGAGATGTTGTATTTACATTAACTAGAAAAGTTGGGGACTATTTGGTAGTTTGCTGTTCATTGTAGTTTTTATCACTCTCCCCTCGAGCAAAAAGCCTAGGTCGTTGCTCCATATAAACTTCCTTCGGAAGATCACCTTGGAGAAAAAGCATTTTTATGTCAAGTTGATATAAAGGCCAATCTTGAGATTCTGCCATAGAAAAGAATAACCTGACAAAAGTGAGTTTAGCAGCAGAAGAGAACGTATCAAGTAATCAACCCCATACGTCTAAGCATAACCTTTAGCCACAAGGCGTGCTTTTAGACGAGCTATTGATCCATCGGGATTAACCTTAATTGCGAACACCTAGTTACACCCAATAGTATTCTTTCCTGCTGGAAGAGATACTAAATCTTGAGTACCATTATCATCTAAGGCATTCACCTCTTCAATTTTTGCACTACGCCACCCAAAATGAGACAAAGCTTCATAAACGGTCTTAGGTATTGAGATAGAGTGAAGAGACTTAACAACCGAATATGAAGGAAATGATAATTGGTCATAAGATACACAAGAAGCAATAAGATAAGTGCAAGAACGTTTACCTTTTCGAAGGAAAATGAAAAGCTCATCACTCGGCCCTGGATCTGATAACAAAGAGTCTTTTGGGACATAACATTAATCTGGAGGATGTTGCCTACGAGAGTAGACTTTAGTTTTAGGTGGACAATTAGGGGTAGGCACTAGAAGAGACAGATGTGGGGAGGGAATTGGAGACGTGAGAGTATAAATAGAAAAAGGTAGTGAAAGGTTGTCCTCAAAGAAAGTAACGTCTCAAGATACAAAATATTTATTCAAACTTGGACAATAACATTTGTATCCTTTTTGAACACGGAAATAACCTAAGAAAATGCACTTCAAAGACTTGGGGTCTAACTTTGTCAAAGTAGGACAAACATCTCGAACAAAACAAGTACAATCGAATATTTTAGGTTCAATAGGAAATATTCGATATTTAATATTAAGAAAGTTTTATTAAATATTTATGTTTTGTCTGGTTTATGATCGACAATTTATAAGAACGTGCTATAAAGTTATAAGTTACTATGATATGACTATATAAAGTGAAACCCCTTATTGTATGTTGCGTATAAAGTTAGTGGCAGCTACCGTCCTACCTATAGCTATGTACACACTAGATTTTGTACTTTCAGGTCCGCTAGATTTGTGTGCCTAATGGCCAACTAATTTTGGTTTTAAAATAGCATGCATAGTAGTAATGACCCTAGTCAGGGACCTCAAAAATCGGATTGTTACAAGAAAGTTCTTTAGTTCATAATTGTATCAATATCTCTAACTTGCAAAGAAGGCGATATAAAACTAGGTACAGTTTAATGTTATGCTGGCTCTTTCGAATTTTGTAGTTTGTTTTTCTTGTTTTCTATCTAATTGATTATATCTTCCAGTGGTCTCGTTATTGAAGAGTAGGCAATATGTTTAAAATGATATTCTGCTTTGGAAATATTATGAAAAGTGTACCCTTTGTTCTCCCTTCTCTTGAAAGATACTGCCAAGTTGCACAAATGTGGTTTAAAATAAACTCTTGAATCATCACTTGGATTTAGCAGCTTTTTCATTATTTCCCTCTATGGTTGTCATTAAGTTGAAGAATGGGAGATGCATCATGCTTCCTAAACTTACGGAGAAAAGGTTATCCAGAAGTAATTTTTGTAACTGACAAAATGATGATGATTAACTATCCTGTTACAGTTAAACACTATCTTTTTTGGTTTGGCAGTATTATGGTTTTAATGGTCAATGAAGAGAATTTTTCAATATTGACATAAATTAAATTTTCAATAGTTTGTCTTTTTGTAATTTTGTTTCTCCCGGAAATCTGTTACTTTCTATCATTCTGTTGATTATCTCTTTTTTTGTTCCCTCTAAGTTGATTGGATTTATTTATCTTCACTGTTTTCAGAAGATGATGGCTTAGGGGTGGAACATTTCTTGGAACCTGGGTTTCGCAAATGCTTGTTGGGAAGAAGTAATTGAAATCCAATGAAATCAAACCCAACTGGAGGTCATTGCTGATTCCTCATCCCTCCTATTGACGAATAGGACGCCATTACCTAAATTTTTTTACCGACCTACTGTATTCCCCAAGTTGGGATTTTTGTGTGTAGAATTTGTTTTAGGTATTGGGGACTCATCAATTTGATCTTGTTTCAAAACCCAACAAGAGTAATCTTCTGAAATAGTCCTTAAATATGAACAATGGGGAAAATAGGCGATTGAATGGGGAAGCTGATGAAGAAGATGATGATGATGATGCCAATGGACTTGCTGCGTGGGAAAGGACTTATGCGGATGATAGGTCGTGGGAAGCCCTGCAAGAGGATGAGTCTGGACTCCTTTGTCCGATCGACAATAAGGCAATTTACCATGCCCAGTATCGTAGGCGCCTTCGTACCCTTTCTTCCTTAGCAACCACTGCTCGGATTCAGAAGGGTCTTATTCGCTATCTCTATATCGTCATCGACTTCTCCAAGGTATTCTTTTTTCTTCCATGACTCTATTACTACATTAGTATTTTTTTTTTTTTTTTTTTTTGTGATAACTTACTACATCAGTAAATGTTTCAAGGAGGTTCTGTGCCTTGGTCTCTCATCTTCTTATTGAGAAAAGGAATTTGTTCTAATGTTGAAGTTAAATGCGTAGCATTGCTCCTGAAATATATCATAACCATCAAATTGCATTTGGTTTTTTTAGCTTACCTAAGAACTGTTATGTGATATAAATTCCTTGTCTCCCCAATTGTTTGTTCCCTGATTATGTTTCAAAGGGTTTGGAGAAGTATCTCCACAGTTATTCCATAGAGGATTGCTACTCATTTAATCCAACTACTATGTAGTGAATGAAACATGTGCTACCTTGAGTTTTTTTTTTTGAGCAAGTATGACTTATGTTCATAGAAACTGTAAATCACTGGAGATAAATAACTTTGAAAATATGGTTACGGAATGGAGGTTTTGCTTTCTCTATTTTTTTTCATTTTGCTTATTCCACCATGGGCAGGCTGCTACAGAAATGGATTTCCGACCAAGTCGAATGGCTGTTGTGGCAAAACATGTAGAGGCTTTCGTAAGGGAATTCTTTGACCAAAATCCACTCAGCCAGATTGGTTTGGTGACTATAAAAGATGGAGTTGCTCATTGCTTAACAGATCTTGGTGGAAGTCCTGAATCTCATGTTAAAGCGTTAATGGGTAAACTGGAATGCTCAGGTGATGCTTCCTTGCAGAATGGTCTGGAACTTGTCCACAGCTATCTAAATCAAATTCCATCATATGGGCATAGAGAAGTTTTAGTCTTATACTCTGCTCTTAATTCTTGTGATCCTGGGGACATCATGGAGACAGTTCAGAAATGCAAAACTTCTAAAATAAGGTGTTCAGTTATTGGTCTTACTGCAGAAATTTTTATATGCAGACATCTCTGCCAAGAAACTGGTGGCTCATACTCTGTCGCATTGGATGAGGTTAGTTCAATAGATGTGTTAATTTCCCAAAATTGAGAGAAATTGAAATGGCTATTTTTTTAGTTGATCAGCTAATTGAACCGACCATAAATGAAGCTTAACAGAGAACACAGTTATGAAACAGAAGTTCAAAGTTTAATTACTATAGCAAGATTTTATTTGATGTTTTTATATATGGAAGTTCTGTTTCCTAAATCTTAGTGGAATACTTGCCTTCGTTTTATTTACAGTCTCACTTCAAAGAGTTGCTATTGGAGCATGCACCCCCACCCCCAGCAATTGCAGACTCTGCCATGCCTAATTTAATCAAGATGGGTTTTCCACAAAGAGCAGCAGAGAGTTCCATTGCAATATGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCAAGGGTTTGTGAGCTTCCCACAGAGTGTCGAATTTGTGGACTGACTCTTATCTCCTCACCCCATTTGGCTAGGTCGTATCATCATCTTTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTATTTCATGACCCACGACACCAACTTCCAAAAGTTTGCTTTGGCTGCCAAGAAAGCCTCATGAATCCTGGTAAGAACTCAATGAAACATGATATTTGAAGCTCTCAAATGAAACTTCTTTTTATGACATTTGTTGTCTTCTAATAATATAGTGCACATACCGTTATGCCCAATTCGTCAGCATTTTGTATCGTGATATCTTAGAATCAGATGATTTGAAGATTAAAAACATATTTATTGTATTTACTACTAGGAGTTTGTTAATGCCTTGCAATGTTCGACTCCTAAAGCAAAAAAATGATGTGTATAAGAGATCTTCCACGTTTCTTGTTTGTGTTTTGGTCATTCTTCAGTATTAATTATTGTAAGCACCAGTACTACAATCTGCTGAAACAAGCATAGGGAACTAAGTTGTTATCTATATAATTTGGTATCGCCTTCTCTGTTGGGTGACTTCTTTTTATTACATTGTTCATGTGTGATTTTGTTTATGGCAATGGGAGCTACTTATACTTATGACTTCCAAGTAAGAATAGATAAACATGGATGATTTGTTGTTACTTTATGATTTGCTGAATCTAACATTTTCACTCTCCATTCAATGTACTTTTCATTTTAGGCACACGTAACAGTCCAGGCATCCGTGTTTCTTGCCCAAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATTCACGAGAGCTTGCACAATTGTCCTGGCTGTGAGAGTTTCAGGCATCCCAAATTAGCGACTTTTGACGAATGAATGTCTACTTTTAGATGCAACAATATGGCCCTAACCGAATCCAAATAGG

mRNA sequence

TCTTCATCTCTTCAATTTCACCGTTTTTCTCTATCTAAAAAGTAAACGAATCAAACAAACTTCAAACTGTTTTTCTCTTCATTCTTTCGTACTTAGACTCAGAGATCGGGAGCAGTTAAATCCACAAATCGGAAGAACATGGGTCAAGCTTTTCCCGAACTCTTCGACTCATTTTTTGGCAACTCCGAGATGCGGAAGATGATGGCTTAGGGGTGGAACATTTCTTGGAACCTGGGTTTCGCAAATGCTTGTTGGGAAGAAGTAATTGAAATCCAATGAAATCAAACCCAACTGGAGGTCATTGCTGATTCCTCATCCCTCCTATTGACGAATAGGACGCCATTACCTAAATTTTTTTACCGACCTACTGTATTCCCCAAGTTGGGATTTTTGTGTGTAGAATTTGTTTTAGGTATTGGGGACTCATCAATTTGATCTTGTTTCAAAACCCAACAAGAGTAATCTTCTGAAATAGTCCTTAAATATGAACAATGGGGAAAATAGGCGATTGAATGGGGAAGCTGATGAAGAAGATGATGATGATGATGCCAATGGACTTGCTGCGTGGGAAAGGACTTATGCGGATGATAGGTCGTGGGAAGCCCTGCAAGAGGATGAGTCTGGACTCCTTTGTCCGATCGACAATAAGGCAATTTACCATGCCCAGTATCGTAGGCGCCTTCGTACCCTTTCTTCCTTAGCAACCACTGCTCGGATTCAGAAGGGTCTTATTCGCTATCTCTATATCGTCATCGACTTCTCCAAGGCTGCTACAGAAATGGATTTCCGACCAAGTCGAATGGCTGTTGTGGCAAAACATGTAGAGGCTTTCGTAAGGGAATTCTTTGACCAAAATCCACTCAGCCAGATTGGTTTGGTGACTATAAAAGATGGAGTTGCTCATTGCTTAACAGATCTTGGTGGAAGTCCTGAATCTCATGTTAAAGCGTTAATGGGTAAACTGGAATGCTCAGGTGATGCTTCCTTGCAGAATGGTCTGGAACTTGTCCACAGCTATCTAAATCAAATTCCATCATATGGGCATAGAGAAGTTTTAGTCTTATACTCTGCTCTTAATTCTTGTGATCCTGGGGACATCATGGAGACAGTTCAGAAATGCAAAACTTCTAAAATAAGGTGTTCAGTTATTGGTCTTACTGCAGAAATTTTTATATGCAGACATCTCTGCCAAGAAACTGGTGGCTCATACTCTGTCGCATTGGATGAGTCTCACTTCAAAGAGTTGCTATTGGAGCATGCACCCCCACCCCCAGCAATTGCAGACTCTGCCATGCCTAATTTAATCAAGATGGGTTTTCCACAAAGAGCAGCAGAGAGTTCCATTGCAATATGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCAAGGGTTTGTGAGCTTCCCACAGAGTGTCGAATTTGTGGACTGACTCTTATCTCCTCACCCCATTTGGCTAGGTCGTATCATCATCTTTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTATTTCATGACCCACGACACCAACTTCCAAAAGTTTGCTTTGGCTGCCAAGAAAGCCTCATGAATCCTGGCACACGTAACAGTCCAGGCATCCGTGTTTCTTGCCCAAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATTCACGAGAGCTTGCACAATTGTCCTGGCTGTGAGAGTTTCAGGCATCCCAAATTAGCGACTTTTGACGAATGAATGTCTACTTTTAGATGCAACAATATGGCCCTAACCGAATCCAAATAGG

Coding sequence (CDS)

ATGAACAATGGGGAAAATAGGCGATTGAATGGGGAAGCTGATGAAGAAGATGATGATGATGATGCCAATGGACTTGCTGCGTGGGAAAGGACTTATGCGGATGATAGGTCGTGGGAAGCCCTGCAAGAGGATGAGTCTGGACTCCTTTGTCCGATCGACAATAAGGCAATTTACCATGCCCAGTATCGTAGGCGCCTTCGTACCCTTTCTTCCTTAGCAACCACTGCTCGGATTCAGAAGGGTCTTATTCGCTATCTCTATATCGTCATCGACTTCTCCAAGGCTGCTACAGAAATGGATTTCCGACCAAGTCGAATGGCTGTTGTGGCAAAACATGTAGAGGCTTTCGTAAGGGAATTCTTTGACCAAAATCCACTCAGCCAGATTGGTTTGGTGACTATAAAAGATGGAGTTGCTCATTGCTTAACAGATCTTGGTGGAAGTCCTGAATCTCATGTTAAAGCGTTAATGGGTAAACTGGAATGCTCAGGTGATGCTTCCTTGCAGAATGGTCTGGAACTTGTCCACAGCTATCTAAATCAAATTCCATCATATGGGCATAGAGAAGTTTTAGTCTTATACTCTGCTCTTAATTCTTGTGATCCTGGGGACATCATGGAGACAGTTCAGAAATGCAAAACTTCTAAAATAAGGTGTTCAGTTATTGGTCTTACTGCAGAAATTTTTATATGCAGACATCTCTGCCAAGAAACTGGTGGCTCATACTCTGTCGCATTGGATGAGTCTCACTTCAAAGAGTTGCTATTGGAGCATGCACCCCCACCCCCAGCAATTGCAGACTCTGCCATGCCTAATTTAATCAAGATGGGTTTTCCACAAAGAGCAGCAGAGAGTTCCATTGCAATATGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCAAGGGTTTGTGAGCTTCCCACAGAGTGTCGAATTTGTGGACTGACTCTTATCTCCTCACCCCATTTGGCTAGGTCGTATCATCATCTTTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTATTTCATGACCCACGACACCAACTTCCAAAAGTTTGCTTTGGCTGCCAAGAAAGCCTCATGAATCCTGGCACACGTAACAGTCCAGGCATCCGTGTTTCTTGCCCAAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATTCACGAGAGCTTGCACAATTGTCCTGGCTGTGAGAGTTTCAGGCATCCCAAATTAGCGACTTTTGACGAATGA

Protein sequence

MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLATFDE*

Homology

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BLAST of MELO3C005421 vs. Swiss-Prot
Match: TF2H2_ARATH (General transcription factor IIH subunit 2 OS=Arabidopsis thaliana GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 3.0e-189
Identity = 315/418 (75.36%), Postives = 354/418 (84.69%), Query Frame = 1


Query: 7   RRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHAQYRRRL 66
           R+ + +  EE+DD+DA G+  WER Y DDRSWE LQEDESGLL PIDN AIYHAQYRRRL
Sbjct: 5   RKRSNDEREEEDDEDAEGIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQYRRRL 64

Query: 67  RTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREFFDQNPL 126
           R LS+ A   RIQKGLIRYLYIVIDFS+AA EMDFRPSRMA++AKHVEAF+REFFDQNPL
Sbjct: 65  RMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFDQNPL 124

Query: 127 SQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYG 186
           SQIGLV+IK+GVAH LTDLGGSPE+H+KALMGKLE  GD+SLQN LELVH +LNQ+PSYG
Sbjct: 125 SQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQVPSYG 184

Query: 187 HREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVAL 246
           HREVL+LYSAL +CDPGDIMET+QKCK SK+RCSVIGL+AE+FIC+HLCQETGG YSVA+
Sbjct: 185 HREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAV 244

Query: 247 DESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPR 306
           DE H K+LLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE S+AICSCHKE K+G GY CPR
Sbjct: 245 DEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPR 304

Query: 307 CKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEV-SDKVFHDPRHQLPKVCFG 366
           CKARVC+LPTEC ICGLTL+SSPHLARSYHHLFPI PFDEV +    +D R +L K CFG
Sbjct: 305 CKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGKSCFG 364

Query: 367 CQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLATFDE 424
           CQ+SL+  G  N P   V+C KCK +FCLDCDIYIHESLHNCPGCES   PK  +  E
Sbjct: 365 CQQSLIGAG--NKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLME 420

[Close]

BLAST of MELO3C005421 vs. Swiss-Prot
Match: TFH47_SCHPO (TFIIH basal transcription factor complex p47 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tfh47 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.7e-89
Identity = 168/419 (40.10%), Postives = 239/419 (57.04%), Query Frame = 1


Query: 2   NNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHAQ 61
           +  E+ + NG         D N    WE  Y   RSW+ +QED  G L  +    I   +
Sbjct: 13  SESEDEQKNGRVKVRSRKTDDNEGYTWEGEY--QRSWDIVQEDAEGSLVGVIAGLIQSGK 72

Query: 62  YRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREFF 121
            +R LR       T  +Q+G+IR++ +V+D S +  E DF   R  +  K+   FV EFF
Sbjct: 73  RKRLLRD------TTPLQRGIIRHMVLVLDLSNSMEERDFHHKRFDLQIKYASEFVLEFF 132

Query: 122 DQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQ 181
           +QNP+SQ+ ++ + DG+AH +TDL G+P+SH++ L    +CSG+ SLQN LE+  + L+ 
Sbjct: 133 EQNPISQLSIIGVMDGIAHRITDLHGNPQSHIQKLKSLRDCSGNFSLQNALEMARASLSH 192

Query: 182 IPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGS 241
           I S+G REVL+++ ++ S DPGDI +T+       IR  ++GL AE+ IC+ +C +T  S
Sbjct: 193 IASHGTREVLIIFGSILSSDPGDIFKTIDALVHDSIRVRIVGLAAEVAICKEICNKTNSS 252

Query: 242 ----YSVALDESHFKELLLEHA-PPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEA 301
               Y V + E HF+ELLLE   PP    A +   +L+ MGFP +  E   ++C+CH   
Sbjct: 253 TKNAYGVVISEQHFRELLLESTIPPATDSAKTTDASLVMMGFPSKVVEQLPSLCACH-SI 312

Query: 302 KVGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPR 361
              GG+ CPRCKA+VC LP EC  C L LI S HLARSYHHLFP+  + E+         
Sbjct: 313 PSRGGFHCPRCKAKVCTLPIECPSCSLVLILSTHLARSYHHLFPLKNWSEIPWSANPKST 372

Query: 362 HQLPKVCFGCQ----ESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCE 412
           H     CF CQ    +  ++P   ++  +R +CP CK HFCLDCD++ HE LH C GC+
Sbjct: 373 H-----CFACQLPFPKPPVSPFDESTSSMRYACPSCKNHFCLDCDVFAHEQLHECYGCQ 417

[Close]

BLAST of MELO3C005421 vs. Swiss-Prot
Match: TF2H2_DICDI (General transcription factor IIH subunit 2 OS=Dictyostelium discoideum GN=gtf2h2 PE=3 SV=2)

HSP 1 Score: 326.2 bits (835), Expect = 5.1e-88
Identity = 164/423 (38.77%), Postives = 253/423 (59.81%), Query Frame = 1


Query: 2   NNGENRRLNGEADEEDD---------DDDANGLAAWERTYADDRSWEALQEDESGLLCPI 61
           NN +N+R N    +++D         D+D      WE  +  +++W  + EDE GL  P 
Sbjct: 8   NNAQNKRTNRSLYDDEDGPAHVLQTNDEDGTNKYKWENRF--EKTWLTIDEDEHGLR-PS 67

Query: 62  DNKAIYHAQYRRRLRTLSS---LATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVV 121
           + +        RRL+       L+   R+++G+ R+L +++D SK  +  D +PSR  V+
Sbjct: 68  NQEE--RNTRNRRLKNKDRDGILSQDQRVRRGMQRHLCLILDLSKTLSNQDLKPSRYQVL 127

Query: 122 AKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQ 181
            ++VE F++EFFDQNP+SQ+ ++  K+  A  +++L G+   H++A+   +   G+ S+Q
Sbjct: 128 LQNVELFIKEFFDQNPISQLSIIITKNSKAEKISELSGNRLRHIQAMKDAIAMEGEPSIQ 187

Query: 182 NGLELVHSYLNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIF 241
           N LE+  S L  +P YG REVL ++S+L +CDP  + +T+Q  K   IR S I + AE++
Sbjct: 188 NSLEVALSSLCYVPKYGSREVLFIFSSLTTCDPSSLQKTIQSLKNESIRVSFIHMAAELY 247

Query: 242 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAI 301
           IC+ + ++T G+  V L+E HF E L+    PPP I  +    L++MGFPQ+   +  + 
Sbjct: 248 ICKAIAEQTNGTSKVILNEEHFNESLMLKCQPPPTIGKTEAA-LVEMGFPQQITSTVPSP 307

Query: 302 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSD 361
           C CH++ K   GY CPRC  + CELPT+C+IC L+L+SSPHLARSYHHLF I  F+EV+ 
Sbjct: 308 CICHEKMKY-SGYICPRCGVKSCELPTDCQICNLSLVSSPHLARSYHHLFQIPLFNEVNW 367

Query: 362 KVFHDPRHQLPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 413
           K  +         C GC    ++   ++   +  SCP+C++ FCLDCD++IHESLHNCPG
Sbjct: 368 KELNK-----NVTCIGC----LSSSEKSILSLFFSCPRCQEIFCLDCDLFIHESLHNCPG 414

[Close]

BLAST of MELO3C005421 vs. Swiss-Prot
Match: TF2H2_HUMAN (General transcription factor IIH subunit 2 OS=Homo sapiens GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 5.1e-88
Identity = 166/405 (40.99%), Postives = 244/405 (60.25%), Query Frame = 1


Query: 19  DDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHAQYRRRLRTLSSLATTARI 78
           D++      WE  Y  +R+WE L+EDESG L       ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 79  QKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGV 138
           + G++R+LY+V+D S+   + D +P+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 139 AHCLTDLGGSPESHVKALMGKLE--CSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSA 198
           A  LT+L G+P  H+ +L   ++  C G+ SL N L +    L  +P +  REVL+++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSS 181

Query: 199 LNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLL 258
           L +CDP +I + ++  K +KIR SVIGL+AE+ +C  L +ETGG+Y V LDESH+KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLT 241

Query: 259 EHAPPPPAIADSAMPNLIKMGFPQRA--------AESSIAICSCHKEAKVG---GGYTCP 318
            H  PPPA + S+  +LI+MGFPQ          A+ S ++       + G   GGY CP
Sbjct: 242 HHVSPPPA-SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCP 301

Query: 319 RCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFG 378
           +C+A+ CELP EC+ICGLTL+S+PHLARSYHHLFP+  F E+  + ++  R      C+G
Sbjct: 302 QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGER-----FCYG 361

Query: 379 CQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGC 411
           CQ  L +            C  C+  FC+DCD+++H+SLH CPGC
Sbjct: 362 CQGELKDQHV-------YVCAVCQNVFCVDCDVFVHDSLHCCPGC 385

[Close]

BLAST of MELO3C005421 vs. Swiss-Prot
Match: T2H2L_HUMAN (General transcription factor IIH subunit 2-like protein OS=Homo sapiens GN=GTF2H2C PE=1 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 6.7e-88
Identity = 166/405 (40.99%), Postives = 244/405 (60.25%), Query Frame = 1


Query: 19  DDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHAQYRRRLRTLSSLATTARI 78
           D++      WE  Y  +R+WE L+EDESG L       ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 79  QKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGV 138
           + G++R+LY+V+D S+   + D +P+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 139 AHCLTDLGGSPESHVKALMGKLE--CSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSA 198
           A  LT+L G+P  H+ +L   ++  C G+ SL N L +    L  +P +  REVL+++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 199 LNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLL 258
           L +CDP +I + ++  K +KIR SVIGL+AE+ +C  L +ETGG+Y V LDESH+KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLT 241

Query: 259 EHAPPPPAIADSAMPNLIKMGFPQRA--------AESSIAICSCHKEAKVG---GGYTCP 318
            H  PPPA + S+  +LI+MGFPQ          A+ S ++       + G   GGY CP
Sbjct: 242 HHLSPPPA-SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCP 301

Query: 319 RCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFG 378
           +C+A+ CELP EC+ICGLTL+S+PHLARSYHHLFP+  F E+  + ++  R      C+G
Sbjct: 302 QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGER-----FCYG 361

Query: 379 CQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGC 411
           CQ  L +            C  C+  FC+DCD+++H+SLH CPGC
Sbjct: 362 CQGELKDQHV-------YVCAVCQNVFCVDCDVFVHDSLHCCPGC 385

[Close]

BLAST of MELO3C005421 vs. TrEMBL
Match: A0A0A0KPM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G169080 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 3.2e-246
Identity = 414/423 (97.87%), Postives = 416/423 (98.35%), Query Frame = 1


Query: 1   MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHA 60
           MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLL PIDNKAIYHA
Sbjct: 1   MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHA 60

Query: 61  QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREF 120
           QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHV+AFVREF
Sbjct: 61  QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREF 120

Query: 121 FDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180
           FDQNPLSQIGLVTIKDG A+CLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN
Sbjct: 121 FDQNPLSQIGLVTIKDGFANCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180

Query: 181 QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240
           QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG
Sbjct: 181 QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240

Query: 241 SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300
           SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG
Sbjct: 241 SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300

Query: 301 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360
           GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP
Sbjct: 301 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360

Query: 361 KVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLAT 420
           KVCFGCQESLMNP T NSP IRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFR PKLAT
Sbjct: 361 KVCFGCQESLMNPSTGNSPSIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKLAT 420

Query: 421 FDE 424
            DE
Sbjct: 421 SDE 423

[Close]

BLAST of MELO3C005421 vs. TrEMBL
Match: F6GTZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03170 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 1.5e-206
Identity = 343/425 (80.71%), Postives = 383/425 (90.12%), Query Frame = 1


Query: 2   NNGENRRLNGEADEEDDDDD---ANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIY 61
           N+GE RRL+GE +EE++D+D     GL AWER YAD+RSWE+LQEDESGLL PIDNK IY
Sbjct: 10  NDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIY 69

Query: 62  HAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVR 121
           HAQYRRR+R+L S  TTARIQKGLIRYLYIV+D S+AA+EMDF+PSRMAVVAKH+EAF+R
Sbjct: 70  HAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIR 129

Query: 122 EFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSY 181
           EFFDQNPLSQIGLVTIKDG+A CLTDLGGSP+SHVKALMGKLECSGD+SLQN L+LVH Y
Sbjct: 130 EFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGY 189

Query: 182 LNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQET 241
           LNQIPSYGHREVL+LYSAL++CDPGDIMET+Q+CK SKIRCSVIGL+AEIFICRHLCQET
Sbjct: 190 LNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQET 249

Query: 242 GGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKV 301
           GGSYSVALDESHFKELLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE  I+ICSCHKEAKV
Sbjct: 250 GGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKV 309

Query: 302 GGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQ 361
           GGGYTCPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI PFDEVS  + ++P  +
Sbjct: 310 GGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQR 369

Query: 362 LPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKL 421
             + CFGCQESL+ PG  N P + V+CPKCKQHFCLDCDIYIHESLHNCPGCESFRH K+
Sbjct: 370 SSRACFGCQESLLIPG--NKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKI 429

Query: 422 ATFDE 424
            +  E
Sbjct: 430 VSVTE 432

[Close]

BLAST of MELO3C005421 vs. TrEMBL
Match: W9RVY0_9ROSA (General transcription factor IIH subunit 2 OS=Morus notabilis GN=L484_014405 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 1.4e-204
Identity = 342/426 (80.28%), Postives = 376/426 (88.26%), Query Frame = 1


Query: 2   NNGENRRLNGEADEEDDDDD----ANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAI 61
           NNGE RRLNG A+++DDD+D      GL AWERTYAD+RSWE+LQEDESGLL PIDNK  
Sbjct: 3   NNGEERRLNGAAEDDDDDEDDDGNGRGLEAWERTYADERSWESLQEDESGLLRPIDNKTF 62

Query: 62  YHAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFV 121
           YHAQYRRRLR+ S++    RIQKGLIRYL++VID SKAA EMDFRPSRMAVVAKHVEAF+
Sbjct: 63  YHAQYRRRLRSASAV----RIQKGLIRYLFLVIDLSKAAAEMDFRPSRMAVVAKHVEAFI 122

Query: 122 REFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHS 181
           REFFDQNPLSQ+GLVTIKDGVAHCLTDLGGSPESHVK+LMGKLECSG++S+QN L+LVH 
Sbjct: 123 REFFDQNPLSQVGLVTIKDGVAHCLTDLGGSPESHVKSLMGKLECSGESSIQNALDLVHD 182

Query: 182 YLNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQE 241
           YLNQIPSYGHREVL+ YSAL++CDPGDIMET+QKCK SKIRCSVIGL+AEIFIC+HLCQE
Sbjct: 183 YLNQIPSYGHREVLIFYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQE 242

Query: 242 TGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAK 301
           TGGSYSVALDESHFKEL+LEHAPPPPAIA+ A+ NLIKMGFPQRAAESSIAICSCHKEAK
Sbjct: 243 TGGSYSVALDESHFKELILEHAPPPPAIAEYAIANLIKMGFPQRAAESSIAICSCHKEAK 302

Query: 302 VGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRH 361
            GGGYTCPRCKARVCELPTEC+ CGLTLISSPHLARSYHHLFPI+PFDE+S  +  DP  
Sbjct: 303 AGGGYTCPRCKARVCELPTECQTCGLTLISSPHLARSYHHLFPIVPFDEMSTSLLSDPHR 362

Query: 362 QLPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPK 421
           +L K CFGCQ+SL+  G  N PG RVSCPKCK  FCLDCDIYIHESLHNCPGCES RH K
Sbjct: 363 KLSKACFGCQQSLL--GFGNKPGPRVSCPKCKHQFCLDCDIYIHESLHNCPGCESARHSK 422

Query: 422 LATFDE 424
                E
Sbjct: 423 PVAMSE 422

[Close]

BLAST of MELO3C005421 vs. TrEMBL
Match: M5VYB6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006259mg PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 6.8e-204
Identity = 338/420 (80.48%), Postives = 378/420 (90.00%), Query Frame = 1


Query: 1   MNNGENRRLNGEADEEDDDDDAN--GLAAWERTYADDRSWEALQEDESGLLCPIDNKAIY 60
           MNNGE RRLNGEA+E++++DDAN  GLAAWER YAD+RSWE+LQEDESGLL PIDN+++ 
Sbjct: 1   MNNGEQRRLNGEAEEDEEEDDANNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSLK 60

Query: 61  HAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVR 120
           HAQYRRRLR     A+TARIQKGLIRY+YIVID SKAA EMDFRPSRM VVAKHVEAF+ 
Sbjct: 61  HAQYRRRLRA----ASTARIQKGLIRYVYIVIDLSKAAAEMDFRPSRMGVVAKHVEAFII 120

Query: 121 EFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSY 180
           EFF QNPLSQ+GLVTIKDGVAHCLTDLGGSP SHVKALMGKLECSGD+SLQN L+LVH Y
Sbjct: 121 EFFYQNPLSQVGLVTIKDGVAHCLTDLGGSPNSHVKALMGKLECSGDSSLQNALDLVHGY 180

Query: 181 LNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQET 240
           L QIPSYGHREVL+LYSAL++CDPGDIMET+QKCK SKIRCSVIGL+AEIFIC+HLCQET
Sbjct: 181 LEQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQET 240

Query: 241 GGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKV 300
           GG Y +ALDE H KEL+LEHAPPPPAIA+ A+ NLIKMGFPQRAAE S+AICSCHKEAKV
Sbjct: 241 GGLYYIALDEPHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAKV 300

Query: 301 GGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQ 360
           GGGYTCPRCKARVC+LPTECRICGLTLISSPHLARSYHHLFPI+PFDEVS  +  D +++
Sbjct: 301 GGGYTCPRCKARVCDLPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSPSLLIDQQNK 360

Query: 361 LPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKL 419
            P+ CFGCQ+SL+NPG  N P +RV+CPKCKQHFCLDCDIYIH+SLHNCPGCES  H K+
Sbjct: 361 FPRACFGCQQSLLNPG--NKPSLRVACPKCKQHFCLDCDIYIHDSLHNCPGCESASHSKI 414

[Close]

BLAST of MELO3C005421 vs. TrEMBL
Match: A0A061GUH7_THECC (General transcription factor II H2 isoform 1 OS=Theobroma cacao GN=TCM_041075 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 3.4e-203
Identity = 335/418 (80.14%), Postives = 375/418 (89.71%), Query Frame = 1


Query: 1   MNNGENRRLNGEADEEDDDDDANG-LAAWERTYADDRSWEALQEDESGLLCPIDNKAIYH 60
           MNNG  RR+NG  +E+DD+D  NG L AWERTY D+RSWE+LQEDESGLL PIDNKA+YH
Sbjct: 1   MNNGGARRMNGGGEEDDDEDYVNGDLDAWERTYTDERSWESLQEDESGLLRPIDNKALYH 60

Query: 61  AQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVRE 120
           +QYRRRLR+LSS AT ARIQKGLIRYLY+VID S+AA+E DFRPSR+ V+AKHVEAF+RE
Sbjct: 61  SQYRRRLRSLSSTATAARIQKGLIRYLYLVIDLSRAASETDFRPSRIVVIAKHVEAFIRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYL 180
           FFDQNPLSQ+GL+TIKDGVA CLTDLGGSPESH+KALM KLECSGD+SLQN L+LV  YL
Sbjct: 121 FFDQNPLSQVGLLTIKDGVAQCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLVDGYL 180

Query: 181 NQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVL+LY+AL++CDPGDIMET+QKCK SKIRCSVIGL AE+FIC+HLCQETG
Sbjct: 181 NQIPSYGHREVLILYAALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           G+YSVALDESHFKEL+LEHAPPPPAIA+ A  NLIKMGFPQRAAE SI+ICSCHKEAKVG
Sbjct: 241 GTYSVALDESHFKELILEHAPPPPAIAEFATANLIKMGFPQRAAEGSISICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQL 360
            GYTCPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI PFDEV     +DP H+L
Sbjct: 301 AGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPPFSLNDPNHKL 360

Query: 361 PKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPK 418
            + CFGCQ+SL+NPG  N PG+ V CPKCK +FCLDCDIYIHESLHNCPGC+SFRH K
Sbjct: 361 QRNCFGCQQSLLNPG--NKPGLLVVCPKCKGYFCLDCDIYIHESLHNCPGCDSFRHSK 416

[Close]

BLAST of MELO3C005421 vs. TAIR10
Match: AT1G05055.1 (AT1G05055.1 general transcription factor II H2)

HSP 1 Score: 662.5 bits (1708), Expect = 1.7e-190
Identity = 315/418 (75.36%), Postives = 355/418 (84.93%), Query Frame = 1


Query: 7   RRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHAQYRRRL 66
           R+ + +  EE+DD+DA G+  WER Y DDRSWE LQEDESGLL PIDN AIYHAQYRRRL
Sbjct: 5   RKRSNDEREEEDDEDAEGIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQYRRRL 64

Query: 67  RTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREFFDQNPL 126
           R LS+ A   RIQKGLIRYLYIVIDFS+AA EMDFRPSRMA++AKHVEAF+REFFDQNPL
Sbjct: 65  RMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFDQNPL 124

Query: 127 SQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYG 186
           SQIGLV+IK+GVAH LTDLGGSPE+H+KALMGKLE  GD+SLQN LELVH +LNQ+PSYG
Sbjct: 125 SQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQVPSYG 184

Query: 187 HREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVAL 246
           HREVL+LYSAL +CDPGDIMET+QKCK SK+RCSVIGL+AE+FIC+HLCQETGG YSVA+
Sbjct: 185 HREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAV 244

Query: 247 DESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPR 306
           DE H K+LLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE S+AICSCHKE K+G GY CPR
Sbjct: 245 DEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPR 304

Query: 307 CKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEV-SDKVFHDPRHQLPKVCFG 366
           CKARVC+LPTEC ICGLTL+SSPHLARSYHHLFPI PFDEV +    +D R +L K CFG
Sbjct: 305 CKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGKSCFG 364

Query: 367 CQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLATFDE 424
           CQ+SL+  G  N P   V+C KCK +FCLDCDIYIHESLHNCPGCES   PK  +  E
Sbjct: 365 CQQSLIGAG--NKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLME 420

[Close]

BLAST of MELO3C005421 vs. NCBI nr
Match: gi|659073175|ref|XP_008467294.1| (PREDICTED: general transcription factor IIH subunit 2 [Cucumis melo])

HSP 1 Score: 882.5 bits (2279), Expect = 3.0e-253
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 1


Query: 1   MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHA 60
           MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHA
Sbjct: 1   MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHA 60

Query: 61  QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREF 120
           QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREF
Sbjct: 61  QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREF 120

Query: 121 FDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180
           FDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN
Sbjct: 121 FDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180

Query: 181 QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240
           QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG
Sbjct: 181 QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240

Query: 241 SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300
           SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG
Sbjct: 241 SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300

Query: 301 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360
           GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP
Sbjct: 301 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360

Query: 361 KVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLAT 420
           KVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLAT
Sbjct: 361 KVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLAT 420

Query: 421 FDE 424
           FDE
Sbjct: 421 FDE 423

[Close]

BLAST of MELO3C005421 vs. NCBI nr
Match: gi|449451946|ref|XP_004143721.1| (PREDICTED: general transcription factor IIH subunit 2 [Cucumis sativus])

HSP 1 Score: 858.6 bits (2217), Expect = 4.6e-246
Identity = 414/423 (97.87%), Postives = 416/423 (98.35%), Query Frame = 1


Query: 1   MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYHA 60
           MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLL PIDNKAIYHA
Sbjct: 1   MNNGENRRLNGEADEEDDDDDANGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHA 60

Query: 61  QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVREF 120
           QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHV+AFVREF
Sbjct: 61  QYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREF 120

Query: 121 FDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180
           FDQNPLSQIGLVTIKDG A+CLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN
Sbjct: 121 FDQNPLSQIGLVTIKDGFANCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLN 180

Query: 181 QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240
           QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG
Sbjct: 181 QIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGG 240

Query: 241 SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300
           SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG
Sbjct: 241 SYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGG 300

Query: 301 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360
           GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP
Sbjct: 301 GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLP 360

Query: 361 KVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKLAT 420
           KVCFGCQESLMNP T NSP IRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFR PKLAT
Sbjct: 361 KVCFGCQESLMNPSTGNSPSIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKLAT 420

Query: 421 FDE 424
            DE
Sbjct: 421 SDE 423

[Close]

BLAST of MELO3C005421 vs. NCBI nr
Match: gi|297746227|emb|CBI16283.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 726.9 bits (1875), Expect = 2.1e-206
Identity = 343/425 (80.71%), Postives = 383/425 (90.12%), Query Frame = 1


Query: 2   NNGENRRLNGEADEEDDDDD---ANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIY 61
           N+GE RRL+GE +EE++D+D     GL AWER YAD+RSWE+LQEDESGLL PIDNK IY
Sbjct: 71  NDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIY 130

Query: 62  HAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVR 121
           HAQYRRR+R+L S  TTARIQKGLIRYLYIV+D S+AA+EMDF+PSRMAVVAKH+EAF+R
Sbjct: 131 HAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIR 190

Query: 122 EFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSY 181
           EFFDQNPLSQIGLVTIKDG+A CLTDLGGSP+SHVKALMGKLECSGD+SLQN L+LVH Y
Sbjct: 191 EFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGY 250

Query: 182 LNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQET 241
           LNQIPSYGHREVL+LYSAL++CDPGDIMET+Q+CK SKIRCSVIGL+AEIFICRHLCQET
Sbjct: 251 LNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQET 310

Query: 242 GGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKV 301
           GGSYSVALDESHFKELLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE  I+ICSCHKEAKV
Sbjct: 311 GGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKV 370

Query: 302 GGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQ 361
           GGGYTCPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI PFDEVS  + ++P  +
Sbjct: 371 GGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQR 430

Query: 362 LPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKL 421
             + CFGCQESL+ PG  N P + V+CPKCKQHFCLDCDIYIHESLHNCPGCESFRH K+
Sbjct: 431 SSRACFGCQESLLIPG--NKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKI 490

Query: 422 ATFDE 424
            +  E
Sbjct: 491 VSVTE 493

[Close]

BLAST of MELO3C005421 vs. NCBI nr
Match: gi|225435253|ref|XP_002284994.1| (PREDICTED: general transcription factor IIH subunit 2 [Vitis vinifera])

HSP 1 Score: 726.9 bits (1875), Expect = 2.1e-206
Identity = 343/425 (80.71%), Postives = 383/425 (90.12%), Query Frame = 1


Query: 2   NNGENRRLNGEADEEDDDDD---ANGLAAWERTYADDRSWEALQEDESGLLCPIDNKAIY 61
           N+GE RRL+GE +EE++D+D     GL AWER YAD+RSWE+LQEDESGLL PIDNK IY
Sbjct: 10  NDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLLRPIDNKTIY 69

Query: 62  HAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVR 121
           HAQYRRR+R+L S  TTARIQKGLIRYLYIV+D S+AA+EMDF+PSRMAVVAKH+EAF+R
Sbjct: 70  HAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIR 129

Query: 122 EFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSY 181
           EFFDQNPLSQIGLVTIKDG+A CLTDLGGSP+SHVKALMGKLECSGD+SLQN L+LVH Y
Sbjct: 130 EFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGY 189

Query: 182 LNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQET 241
           LNQIPSYGHREVL+LYSAL++CDPGDIMET+Q+CK SKIRCSVIGL+AEIFICRHLCQET
Sbjct: 190 LNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQET 249

Query: 242 GGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKV 301
           GGSYSVALDESHFKELLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE  I+ICSCHKEAKV
Sbjct: 250 GGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKV 309

Query: 302 GGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQ 361
           GGGYTCPRCKARVCELPTECRICGLTL+SSPHLARSYHHLFPI PFDEVS  + ++P  +
Sbjct: 310 GGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQR 369

Query: 362 LPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKL 421
             + CFGCQESL+ PG  N P + V+CPKCKQHFCLDCDIYIHESLHNCPGCESFRH K+
Sbjct: 370 SSRACFGCQESLLIPG--NKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKI 429

Query: 422 ATFDE 424
            +  E
Sbjct: 430 VSVTE 432

[Close]

BLAST of MELO3C005421 vs. NCBI nr
Match: gi|694420768|ref|XP_009338275.1| (PREDICTED: general transcription factor IIH subunit 2 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 726.5 bits (1874), Expect = 2.7e-206
Identity = 341/425 (80.24%), Postives = 384/425 (90.35%), Query Frame = 1


Query: 1   MNNGENRRLNGEADEEDDDDDAN--GLAAWERTYADDRSWEALQEDESGLLCPIDNKAIY 60
           MNNGE RRLNGEA+E++DDDDAN  GLAAWER YAD+RSWE+LQEDESGLL PIDN+++ 
Sbjct: 1   MNNGEQRRLNGEAEEDEDDDDANNGGLAAWERAYADERSWESLQEDESGLLQPIDNQSLK 60

Query: 61  HAQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVR 120
           HAQYRRRLR     A+TARIQKGLIRYL+IVID SKAA EMDFRPSRM VVAKHVEAF+R
Sbjct: 61  HAQYRRRLRA----ASTARIQKGLIRYLFIVIDLSKAAAEMDFRPSRMGVVAKHVEAFIR 120

Query: 121 EFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSY 180
           EFF QNPLSQ+GLVT+KDGVAHCLTDLGGSPESHVKALMGKLECSGD+SLQN L+LVH Y
Sbjct: 121 EFFYQNPLSQVGLVTVKDGVAHCLTDLGGSPESHVKALMGKLECSGDSSLQNALDLVHGY 180

Query: 181 LNQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQET 240
           LNQIPSYGHREVL+LYSAL++CDPGDIMET+QKCK SKIRCSVIGL+AEIF+C+HLCQET
Sbjct: 181 LNQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFVCKHLCQET 240

Query: 241 GGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKV 300
           GGSY +ALDE+H KEL+LEHAPPPPAIA+ A+ NLIKMGFPQRAAE S+AICSCHKEAKV
Sbjct: 241 GGSYYIALDEAHLKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVAICSCHKEAKV 300

Query: 301 GGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQ 360
           G GYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPI+PFDEVS  +  D +++
Sbjct: 301 GAGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIVPFDEVSLSLLIDQQNK 360

Query: 361 LPKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHPKL 420
            P+ CFGCQ++L+ PG  N PG+RV+CPKCKQHFCL+CDIYIHESLHNCPGCES R  ++
Sbjct: 361 FPRACFGCQQNLLGPG--NKPGLRVACPKCKQHFCLECDIYIHESLHNCPGCESTRRSRI 419

Query: 421 ATFDE 424
              +E
Sbjct: 421 PNINE 419

The following BLAST results are available for this feature:

BLAST of MELO3C005421 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF2H2_ARATH	3.0e-189	75.36	General transcription factor IIH subunit 2 OS=Arabidopsis thaliana GN=GTF2H2 PE=...	[more]
TFH47_SCHPO	2.7e-89	40.10	TFIIH basal transcription factor complex p47 subunit OS=Schizosaccharomyces pomb...	[more]
TF2H2_DICDI	5.1e-88	38.77	General transcription factor IIH subunit 2 OS=Dictyostelium discoideum GN=gtf2h2...	[more]
TF2H2_HUMAN	5.1e-88	40.99	General transcription factor IIH subunit 2 OS=Homo sapiens GN=GTF2H2 PE=1 SV=1	[more]
T2H2L_HUMAN	6.7e-88	40.99	General transcription factor IIH subunit 2-like protein OS=Homo sapiens GN=GTF2H...	[more]

BLAST of MELO3C005421 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPM4_CUCSA	3.2e-246	97.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G169080 PE=4 SV=1	[more]
F6GTZ1_VITVI	1.5e-206	80.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03170 PE=4 SV=...	[more]
W9RVY0_9ROSA	1.4e-204	80.28	General transcription factor IIH subunit 2 OS=Morus notabilis GN=L484_014405 PE=...	[more]
M5VYB6_PRUPE	6.8e-204	80.48	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006259mg PE=4 SV=1	[more]
A0A061GUH7_THECC	3.4e-203	80.14	General transcription factor II H2 isoform 1 OS=Theobroma cacao GN=TCM_041075 PE...	[more]

BLAST of MELO3C005421 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05055.1	1.7e-190	75.36	general transcription factor II H2	[more]

BLAST of MELO3C005421 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073175\|ref\|XP_008467294.1\|	3.0e-253	100.00	PREDICTED: general transcription factor IIH subunit 2 [Cucumis melo]	[more]
gi\|449451946\|ref\|XP_004143721.1\|	4.6e-246	97.87	PREDICTED: general transcription factor IIH subunit 2 [Cucumis sativus]	[more]
gi\|297746227\|emb\|CBI16283.3\|	2.1e-206	80.71	unnamed protein product [Vitis vinifera]	[more]
gi\|225435253\|ref\|XP_002284994.1\|	2.1e-206	80.71	PREDICTED: general transcription factor IIH subunit 2 [Vitis vinifera]	[more]
gi\|694420768\|ref\|XP_009338275.1\|	2.7e-206	80.24	PREDICTED: general transcription factor IIH subunit 2 isoform X1 [Pyrus x bretsc...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002035	VWF_A
IPR004595	TFIIH_C1-like_dom
IPR007087	Zinc finger, C2H2
IPR007198	Ssl1-like
IPR012170	TFIIH_SSL1/p44
IPR002035	VWF_A
IPR004595	TFIIH_C1-like_dom
IPR007087	Zinc finger, C2H2
IPR007198	Ssl1-like
IPR012170	TFIIH_SSL1/p44

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair
GO:0006351	transcription, DNA-templated
GO:0006289	nucleotide-excision repair
GO:0006281	DNA repair
GO:0006351	transcription, DNA-templated
GO:0006289	nucleotide-excision repair

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0046872	metal ion binding
GO:0008270	zinc ion binding
GO:0046872	metal ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0000439	core TFIIH complex
GO:0000439	core TFIIH complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006281	DNA repair
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0000439	core TFIIH complex
cellular_component	GO:0005675	holo TFIIH complex
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU67063	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005421T1	MELO3C005421T1	mRNA
MELO3C005421T2	MELO3C005421T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU67063	MU67063	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002035	von Willebrand factor, type A	unknown	SSF53300	vWA-like	coord: 5..150 score: 1.26
IPR004595	TFIIH C1-like domain	PFAM	PF07975	C1_4	coord: 265..314 score: 1.7
IPR004595	TFIIH C1-like domain	SMART	SM01047	C1_4_2	coord: 264..314 score: 2.6
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 287..307 scor
IPR007198	Ssl1-like	PFAM	PF04056	Ssl1	coord: 1..181 score: 2.4
IPR012170	TFIIH subunit Ssl1/p44	PIR	PIRSF015919	TFIIH_SSL1	coord: 1..315 score: 8.1E
IPR012170	TFIIH subunit Ssl1/p44	TIGRFAMs	TIGR00622	TIGR00622	coord: 203..314 score: 1.5
None	No IPR available	GENE3D	G3DSA:3.10.370.10		coord: 259..313 score: 1.7
None	No IPR available	PANTHER	PTHR12695	GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2	coord: 1..324 score: 1.0E
None	No IPR available	unknown	SSF57889	Cysteine-rich domain	coord: 238..313 score: 3.98

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005421	Csa5G169080	Cucumber (Chinese Long) v2	cumeB359
MELO3C005421	Bhi12G000613	Wax gourd	mewgoB008
MELO3C005421	CSPI05G07930	Wild cucumber (PI 183967)	cpimeB351
MELO3C005421	Cucsa.128880	Cucumber (Gy14) v1	cgymeB207
MELO3C005421	CsGy5G005330	Cucumber (Gy14) v2	cgybmeB301
MELO3C005421	CsaV3_5G005370	Cucumber (Chinese Long) v3	cucmeB360

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005421	Silver-seed gourd	carmeB0705
MELO3C005421	Silver-seed gourd	carmeB1002
MELO3C005421	Watermelon (97103) v2	mewmbB009
MELO3C005421	Wax gourd	mewgoB016
MELO3C005421	Cucurbita maxima (Rimu)	cmameB256
MELO3C005421	Cucurbita maxima (Rimu)	cmameB531
MELO3C005421	Cucurbita moschata (Rifu)	cmomeB244
MELO3C005421	Cucurbita moschata (Rifu)	cmomeB520
MELO3C005421	Watermelon (Charleston Gray)	mewcgB019
MELO3C005421	Watermelon (97103) v1	mewmB024
MELO3C005421	Cucurbita pepo (Zucchini)	cpemeB147
MELO3C005421	Cucurbita pepo (Zucchini)	cpemeB648
MELO3C005421	Bottle gourd (USVL1VR-Ls)	lsimeB013