MELO3C005225 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005225
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protease inhibitor/seed storage/lipid transfer family protein
Location	chr9 : 17624389 .. 17626084 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTCAAAAACCAAGCAAATTTAATTAATTAATGATGGGGTCATTTTCCATTGCTTCAAAGGGTGTGATTGTGGGTATGTTTGTGATCGTTCTTGTGGTTTGGGAAGTTGGGGCAGCCGGCGGGGAGTGTGGGAAGACGCCGATAGAATCCGCAGCAATGGGGCTGACGCCGTGCCTGGGGGCGGTGAGGGATGTAAAAGCGAAAGTAACGGGGGCGTGCTGCAACAAAGTGGGGGCGATGTTTAACAGTTCGCCGAAATGCCTTTGCGCCATTCTTTTATCGCCGTTGGCTAAGCAAGCGGGAATAAATCCGGGCATTGCTATTACAATCCCTAAACGTTGTAATATTCGAAACCGTCCTAGAGGAAAGAAGTGTGGGAGTAAGATCTGACTCTCTACTCCTCATCTCTACATCTTTATATGCCTTAAAGTTTACGTCCAGTTTCATCATCATTTTAGTCGCTTTAAGGGTAACTCTATAGTTTTTATTTTCTCAAAATTAAGTCTTCTTTTTCTATTTTAGGAATAATCTTTACAATTTTACCTTAATTTTAAAAATAAAAACAATTTTTTTAAATATATATTTTTTTTACTTTTAAAATTTAGTTTGATTTTTTTTTTTTTTAAATATTGGTAAAAGAATAAATAACAAAGTAAAAAATTTAATGGTGTAAGTGGTTAATAAGCTGAATCTTTAGAAAATTAATTAATTAATATAACCAAATTGTTAATAAACAAATCTTATATTAATCTTTTTAACTTTCTCAATTTTATGTTTAATATGATCTTAAAAATTCAATTTTATACCAAGTATTATTGATTCATTTAAAAGAAAAAAATATGAAAAAACTTATATTTAATATAAAACGAAAAGTTTAAGACTTATTAATTAAAGAATTTAAAATCGTTACAAAAAGAAAAAAATAACCTAAGACTTATTAGCTACGTTTATAAGTTGAACTAAGAATGAATATTTACTAAACTTTTAATTTAAATTTTTTATAATTGTTTTTTGAAATATATATATTTATCTTTCAAACTTTGGTTTGTTTTTCATAGTCCATTTGGATTATTGTTCATAATAAAATTTTCAAAACGGTACCCTATTGTAGTCCTAATGAAGTTGGGAAAATATAATTGTCATGGCTTTTACATATATTTTATTATTTTGTTTGTTTTTAAATATGATCTCCTCCTCATTTATTTAATAAATAGATATTTGGAGGTAAGCCGCACATCGATGTAGATATTGAATTTGGTGGATATTGTTCAATAAAATTATTATAATACATGATCAACTCAAATAATTATTTAATAAAGTTTGTGTCTCTAAATATATCATTAACTATTTTGTTAAATCGTGTAAAGTTTTAGCAATCTTTTCTTAAGGACAAGGATTTAGTAATCATTAAGCTCATTCAATTCAAATTTTCAATAATTACTAATGTCTTCTTTTATCTTTTGGGTACCATATGATTAATATGTCAAATAAGTTTTTTCTTTTTTTCTATTCAATATTCTATTACACAATTGAAATAATAATAATTTTGAAAAAGTATATAATAAATGTAATAGTATTTAAATAATGTGGTTGATTTTGAATTTGCAGAGTACACTCTCCCTTGAGAACTAAAATCCTACCAGCCCACACCCACATATGGAGAAAAGTTGTTATGATCAAAATAATTATGCCAC

mRNA sequence

AAACTCAAAAACCAAGCAAATTTAATTAATTAATGATGGGGTCATTTTCCATTGCTTCAAAGGGTGTGATTGTGGGTATGTTTGTGATCGTTCTTGTGGTTTGGGAAGTTGGGGCAGCCGGCGGGGAGTGTGGGAAGACGCCGATAGAATCCGCAGCAATGGGGCTGACGCCGTGCCTGGGGGCGGTGAGGGATGTAAAAGCGAAAGTAACGGGGGCGTGCTGCAACAAAGTGGGGGCGATGTTTAACAGTTCGCCGAAATGCCTTTGCGCCATTCTTTTATCGCCGTTGGCTAAGCAAGCGGGAATAAATCCGGGCATTGCTATTACAATCCCTAAACGTTGTAATATTCGAAACCGTCCTAGAGGAAAGAAGTGTGGGAAGTACACTCTCCCTTGAGAACTAAAATCCTACCAGCCCACACCCACATATGGAGAAAAGTTGTTATGATCAAAATAATTATGCCAC

Coding sequence (CDS)

ATGATGGGGTCATTTTCCATTGCTTCAAAGGGTGTGATTGTGGGTATGTTTGTGATCGTTCTTGTGGTTTGGGAAGTTGGGGCAGCCGGCGGGGAGTGTGGGAAGACGCCGATAGAATCCGCAGCAATGGGGCTGACGCCGTGCCTGGGGGCGGTGAGGGATGTAAAAGCGAAAGTAACGGGGGCGTGCTGCAACAAAGTGGGGGCGATGTTTAACAGTTCGCCGAAATGCCTTTGCGCCATTCTTTTATCGCCGTTGGCTAAGCAAGCGGGAATAAATCCGGGCATTGCTATTACAATCCCTAAACGTTGTAATATTCGAAACCGTCCTAGAGGAAAGAAGTGTGGGAAGTACACTCTCCCTTGA

Protein sequence

MMGSFSIASKGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP*

Homology

[Close]

BLAST of MELO3C005225 vs. TrEMBL
Match: A0A0A0KJJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099500 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.0e-60
Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 1


Query: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVT 60
           MMGSFSIASKGVIVGMFVIVLVVWEVGAAG ECGKTPIESAAMGLTPCLGAVRDVKAKVT
Sbjct: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAG-ECGKTPIESAAMGLTPCLGAVRDVKAKVT 60

Query: 61  GACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTL 120
           GACC+KVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRP+GKKCGKYTL
Sbjct: 61  GACCSKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPKGKKCGKYTL 120

Query: 121 P 122
           P
Sbjct: 121 P 120

[Close]

BLAST of MELO3C005225 vs. TrEMBL
Match: I1KX00_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G268400 PE=4 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-35
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 16  MFVIV--LVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGAMFNS 75
           MF++   +++ E   AGGECGKTPI SAA  L+PCLGAV +VKAKV  ACC +VGA+  +
Sbjct: 18  MFLLASEVLILEAEGAGGECGKTPIGSAAASLSPCLGAVSNVKAKVPLACCARVGALLKT 77

Query: 76  SPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           +P+CLCA+LLSPLAKQA INP  AITIPKRCNIRNRP GKKCG+YTLP
Sbjct: 78  APRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTLP 125

[Close]

BLAST of MELO3C005225 vs. TrEMBL
Match: A0A0B2RY54_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038774 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-35
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 16  MFVIV--LVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGAMFNS 75
           MF++   +++ E   AGGECGKTPI SAA  L+PCLGAV +VKAKV  ACC +VGA+  +
Sbjct: 13  MFLLASEVLILEAEGAGGECGKTPIGSAAASLSPCLGAVSNVKAKVPLACCARVGALLKT 72

Query: 76  SPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           +P+CLCA+LLSPLAKQA INP  AITIPKRCNIRNRP GKKCG+YTLP
Sbjct: 73  APRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTLP 120

[Close]

BLAST of MELO3C005225 vs. TrEMBL
Match: A0A0B0NQS5_GOSAR (Non-specific lipid-transfer 4-like protein OS=Gossypium arboreum GN=F383_20123 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.6e-35
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 17  FVIVLVVWEVGA--------AGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVG 76
           F++ LVV+++          A GECGKTPI SAA+ L+PCLGA  + KAKV  ACC+KVG
Sbjct: 9   FLVALVVFDISCMVFIKDVEAAGECGKTPIRSAAVSLSPCLGAAGNAKAKVPPACCSKVG 68

Query: 77  AMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           A+  +SP+CLCAILLSPLAKQAGI PGIAI IPKRCNIRNR  GKKCG YT+P
Sbjct: 69  ALLKASPRCLCAILLSPLAKQAGIKPGIAIGIPKRCNIRNRQAGKKCGSYTVP 121

[Close]

BLAST of MELO3C005225 vs. TrEMBL
Match: A0A0D2T7C4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G169400 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.6e-35
Identity = 74/113 (65.49%), Postives = 87/113 (76.99%), Query Frame = 1


Query: 17  FVIVLVVWEVGA--------AGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVG 76
           F++ LVV+++          A GECGKTPI SAA+ L+PCLGA  + KAKV  ACC+KVG
Sbjct: 9   FLVALVVFDISCMVFIKDVEAAGECGKTPIRSAAVSLSPCLGAAGNAKAKVPPACCSKVG 68

Query: 77  AMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           A+  +SP+CLCAILLSPLAKQAGI PGIAI IPKRCNIRNR  GKKCG YT+P
Sbjct: 69  ALLKASPRCLCAILLSPLAKQAGIKPGIAIGIPKRCNIRNRQAGKKCGSYTVP 121

[Close]

BLAST of MELO3C005225 vs. TAIR10
Match: AT2G37870.1 (AT2G37870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 5.5e-33
Identity = 63/112 (56.25%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 10  KGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGA 69
           K V V +  +++ +  V AAG ECG+ PI  AA  L+PCL A ++ + KV   CC KVGA
Sbjct: 5   KFVAVALMSLLISLASVEAAG-ECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGA 64

Query: 70  MFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           +  ++P+CLCA++LSPLAK+AGINPGIAI +PKRCNIRNRP GK+CG+Y +P
Sbjct: 65  LIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115

[Close]

BLAST of MELO3C005225 vs. TAIR10
Match: AT3G53980.1 (AT3G53980.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-26
Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1


Query: 19  IVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGAMFNSSPKCL 78
           ++L++  V    GECG++  ++ AM L PC GA +D  + V G CC ++   F+ +PKCL
Sbjct: 13  LILLIGTVVDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQI-KRFSQNPKCL 72

Query: 79  CAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           CAILLS  AK +G++P +A+TIPKRCN  NRP G KCG YTLP
Sbjct: 73  CAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114

[Close]

BLAST of MELO3C005225 vs. TAIR10
Match: AT5G05960.1 (AT5G05960.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 110.2 bits (274), Expect = 9.4e-25
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 1


Query: 12  VIVGMFVIVLVVWEVGA---AGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVG 71
           V+  +F++VL ++ +       GECG+ P +  A+ L PC  A +D  AKV+  CC +V 
Sbjct: 5   VLSRIFLLVLCIYSLKTMVYGAGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVK 64

Query: 72  AMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
            M   +PKCLCA++LS  A+ +G  P I++TIPKRCNI NRP G KCG YTLP
Sbjct: 65  QM-GQNPKCLCAVMLSSTARSSGAKPEISMTIPKRCNIANRPVGYKCGAYTLP 116

[Close]

BLAST of MELO3C005225 vs. NCBI nr
Match: gi|659072702|ref|XP_008466820.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-63
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVT 60
           MMGSFSIASKGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVT
Sbjct: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVT 60

Query: 61  GACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTL 120
           GACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTL
Sbjct: 61  GACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTL 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of MELO3C005225 vs. NCBI nr
Match: gi|449466869|ref|XP_004151148.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 2.9e-60
Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 1


Query: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVT 60
           MMGSFSIASKGVIVGMFVIVLVVWEVGAAG ECGKTPIESAAMGLTPCLGAVRDVKAKVT
Sbjct: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAG-ECGKTPIESAAMGLTPCLGAVRDVKAKVT 60

Query: 61  GACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTL 120
           GACC+KVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRP+GKKCGKYTL
Sbjct: 61  GACCSKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPKGKKCGKYTL 120

Query: 121 P 122
           P
Sbjct: 121 P 120

[Close]

BLAST of MELO3C005225 vs. NCBI nr
Match: gi|502154136|ref|XP_004509596.1| (PREDICTED: uncharacterized protein LOC101514838 [Cicer arietinum])

HSP 1 Score: 156.4 bits (394), Expect = 3.2e-35
Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 1


Query: 1   MMGSFSIASKGVIVGMFVIVLVVWEVGAAG-GECGKTPIESAAMGLTPCLGAVRDVKAKV 60
           M+  F I +    V +F++   V  + A G GECGKTPI SAA  L+PCL A R+V+AKV
Sbjct: 1   MVMDFKIKTFIATVLIFLLASRVMILEADGAGECGKTPIGSAAASLSPCLDATRNVRAKV 60

Query: 61  TGACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYT 120
           + ACC +VGA+  +SPKCLCA+LLSPLAKQA INP IAIT+PKRCNIRNRP GKKCGKYT
Sbjct: 61  SSACCGRVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYT 120

Query: 121 LP 122
           LP
Sbjct: 121 LP 122

[Close]

BLAST of MELO3C005225 vs. NCBI nr
Match: gi|571473279|ref|XP_003530550.2| (PREDICTED: lipid transfer-like protein VAS [Glycine max])

HSP 1 Score: 156.0 bits (393), Expect = 4.2e-35
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 16  MFVIV--LVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGAMFNS 75
           MF++   +++ E   AGGECGKTPI SAA  L+PCLGAV +VKAKV  ACC +VGA+  +
Sbjct: 18  MFLLASEVLILEAEGAGGECGKTPIGSAAASLSPCLGAVSNVKAKVPLACCARVGALLKT 77

Query: 76  SPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           +P+CLCA+LLSPLAKQA INP  AITIPKRCNIRNRP GKKCG+YTLP
Sbjct: 78  APRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTLP 125

[Close]

BLAST of MELO3C005225 vs. NCBI nr
Match: gi|734413995|gb|KHN37154.1| (hypothetical protein glysoja_038774 [Glycine soja])

HSP 1 Score: 156.0 bits (393), Expect = 4.2e-35
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 16  MFVIV--LVVWEVGAAGGECGKTPIESAAMGLTPCLGAVRDVKAKVTGACCNKVGAMFNS 75
           MF++   +++ E   AGGECGKTPI SAA  L+PCLGAV +VKAKV  ACC +VGA+  +
Sbjct: 13  MFLLASEVLILEAEGAGGECGKTPIGSAAASLSPCLGAVSNVKAKVPLACCARVGALLKT 72

Query: 76  SPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCGKYTLP 122
           +P+CLCA+LLSPLAKQA INP  AITIPKRCNIRNRP GKKCG+YTLP
Sbjct: 73  APRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTLP 120

The following BLAST results are available for this feature:

BLAST of MELO3C005225 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJJ0_CUCSA	2.0e-60	97.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099500 PE=4 SV=1	[more]
I1KX00_SOYBN	2.9e-35	68.52	Uncharacterized protein OS=Glycine max GN=GLYMA_08G268400 PE=4 SV=2	[more]
A0A0B2RY54_GLYSO	2.9e-35	68.52	Uncharacterized protein OS=Glycine soja GN=glysoja_038774 PE=4 SV=1	[more]
A0A0B0NQS5_GOSAR	8.6e-35	65.49	Non-specific lipid-transfer 4-like protein OS=Gossypium arboreum GN=F383_20123 P...	[more]
A0A0D2T7C4_GOSRA	8.6e-35	65.49	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G169400 PE=4 SV=1	[more]

BLAST of MELO3C005225 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37870.1	5.5e-33	56.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G53980.1	1.3e-26	50.49	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G05960.1	9.4e-25	46.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of MELO3C005225 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072702\|ref\|XP_008466820.1\|	2.8e-63	100.00	PREDICTED: protein YLS3 [Cucumis melo]	[more]
gi\|449466869\|ref\|XP_004151148.1\|	2.9e-60	97.52	PREDICTED: protein YLS3 [Cucumis sativus]	[more]
gi\|502154136\|ref\|XP_004509596.1\|	3.2e-35	63.93	PREDICTED: uncharacterized protein LOC101514838 [Cicer arietinum]	[more]
gi\|571473279\|ref\|XP_003530550.2\|	4.2e-35	68.52	PREDICTED: lipid transfer-like protein VAS [Glycine max]	[more]
gi\|734413995\|gb\|KHN37154.1\|	4.2e-35	68.52	hypothetical protein glysoja_038774 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0005504	fatty acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005225T1	MELO3C005225T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 20..115 score: 1.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 41..110 score: 3.69
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 41..109 score: 1.5
None	No IPR available	PANTHER	PTHR33122	FAMILY NOT NAMED	coord: 6..121 score: 5.1
None	No IPR available	PANTHER	PTHR33122:SF8	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 6..121 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005225	Csa5G099500	Cucumber (Chinese Long) v2	cumeB362
MELO3C005225	Cla005830	Watermelon (97103) v1	mewmB030
MELO3C005225	ClCG01G006880	Watermelon (Charleston Gray)	mewcgB019
MELO3C005225	Cla97C01G007260	Watermelon (97103) v2	mewmbB009
MELO3C005225	Bhi12G000871	Wax gourd	mewgoB012
MELO3C005225	CSPI05G02040	Wild cucumber (PI 183967)	cpimeB352
MELO3C005225	Cucsa.026470	Cucumber (Gy14) v1	cgymeB626
MELO3C005225	CmaCh04G021560	Cucurbita maxima (Rimu)	cmameB635
MELO3C005225	CmoCh04G022530	Cucurbita moschata (Rifu)	cmomeB625
MELO3C005225	Cp4.1LG01g18720	Cucurbita pepo (Zucchini)	cpemeB359
MELO3C005225	CsGy5G012160	Cucumber (Gy14) v2	cgybmeB302
MELO3C005225	Carg17698	Silver-seed gourd	carmeB0483
MELO3C005225	CsaV3_5G017280	Cucumber (Chinese Long) v3	cucmeB361

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005225	Cucurbita pepo (Zucchini)	cpemeB157
MELO3C005225	Bottle gourd (USVL1VR-Ls)	lsimeB013
MELO3C005225	Silver-seed gourd	carmeB0821
MELO3C005225	Cucurbita maxima (Rimu)	cmameB252
MELO3C005225	Cucurbita moschata (Rifu)	cmomeB240