ClCG01G006880 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G006880
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Protease inhibitor/seed storage/lipid transfer family protein
Location	CG_Chr01 : 7999189 .. 8001836 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATACCGAATCAAAAACCAAGCAAGAGTGTGTTAAAACGCAAATTAATTAGGTAATAATTAAATTTAAGGATTGGTAATGGGGTCCTTCTCCGGTGCTTCAAAAGCTCTAATTGTGGGTGTGTTAGTGATCCTTCTTGTGAGTTGGGATGGTTTGATTGCCGGAGTTGGGGCAGCCGGAGAGTGTGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGACGCCGTGCCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCTCCTTTGGCTAAGCAGGTGGGAATAAACCCCGCCATTGCCATTACAGTCCCCAAGCGCTGCAACATCAGAAACCGGCCTGTCGGCAAGAAGTGCGGAAGTAAGCTCTAACTCCATACCCACTCACCCTCTCCCTTGAACTTTTAAAAATGATATATTTAAATTGAAATTTTAAGATATGATAAAAAAAAAAAAAAAAAAAAAATTCTTAATATATCTAAATGAACCAAAATATTTATAAATATAGAAAAATTTTATTGTCTATACTATCAGCAGTAATCTATCACGATCTTCTCTTGCGATCTATCACGATTTTCTCTTGCGGTCTATCACAGATAGACTGCAATAGACTGTGTATTTTGCTATTAGTTATAAATATTTTCAGCAGTTTTACCATTTAAAATAATTTTCCTGTGATAAAACATCAAATTTAATTTTATATTGAATAAATTTATTATCAATTGCTTTTTTCAGGAAAAAGTTTGAATATATCACAAATTTATTAGTTCACTATCTATTAGTGATAGACTTATAGATAGAAGTCTATCATGGTCTATCGCTTGCTCAAATGAATAGTTTGCCTCATTTTACTATATTTGAAAATAATCTACTCTTTAAAGATTATATTATATTTTCATTTTTGAATTTTGTTGTGATTGTTTTATTCTTGTTGGTGGCTTTTTTCTTTTTTTACAATGGTTATTTGGGTTTTTTTTTTCAGTTGATTTAGATTTTTGTTAATCAATTTTTCAAAATGGTACCTATTTAGTCCTATAAAGTTTGGGAGAAGGTAATTGTCTGGGTTTTATATATGCTATTAACTTGTGGTTTTTTTTAAGTATTATCTCACGTTGATTATTAATAAAGTACAAAAACTGCCTTAGACATATGATGGTAGTTATAATTACACCCTCAAACTTTCAATTGTAAAAATCAGATCCCTAAACTTCTATCAAAATTAAAATTGGACCCCTAGGCTTGCAATTACTATAGAAATTGAATCCACGGTGATAAAATTGAACTCTTAAACTTATGCAAATGTTGTCATCTATAAAATTATGTATGTTTGAATGTCTAATTTGACCTAATTTAATACTTATTTAAGTTTGAGAACTCAATTTTTAAAATTGAAAGTTTAAGGATATAATTACAACAACCACCCTATAATAAAAGGATGATTTTTTTATTGAAGCCAGGTAGATGTAGATATTGGATTGAGATGAATATTATGTGATAAAATTATAATAGCATGAACTCAAATAGTTTATTTTTATTACTATTATTAATTTTAAAAAACTAAAATAGATATCATAAAAAATTAATGGATCTAGTTAAGTTTTTCTTTAATTTAATAATTTTCGTTGTCATTTTGAATATTTATAGAAGAAAATGAAATCAACTTTTGAATTACTCTTCTTTTTTTTTTCTTTTTTCCTTTTTTTTTTTTTTTTTTGTAATTTGTAAGTTACAACTAAGTGAATTTGCAATTAAATAAAAGTTAAAGATAATATCATAATTATTATAAATAATATGATTGGCAATGCAAAATAATAGTGAGGCAATGAAATCTAATTGTCAACCATTGATTAATAAAGTTAGATGTATCATTCTTAATAATTGATTTACTTAATGTAAATATATTATTAACTATTTTGTTAAATGTAAAGTTTTTAGTGATCATTTTTTTGAAAATAAGTTTTTAGTAATCATTAAGTTCAATCAAATCAAAATTTTCAATAATTATTAATATGTCCCTTTTTTTTTCTTTTGGTTCCATATGATTAATAGTTAAAATAAGTTCTTACACTTCCTTTTTTAAAACAATGTTTATTGATCATCTTGTAAATGCTACATGTTTATGTAACAAATATATTTGATGTAATATCTTATATTTTTTGTTATTCAATATTTTATGAAATCATCTAGTAATTTTAAATAAATATATAAGAAATGTAAAATATAATCAAAGTAATGGGTTTATTTTGGTTTTGTGCAGAGTACACTCTCCCTTGAGAACTAAAGTATAGCTACTCACAGCCACATGAAAAAAGTCGTTATGTTATAATTATGTCACATCATATTTCTGTACCCTAATAAATTAATATATATATCCATCGCAGTCAATGTCTAATGTTTGAGTTGTTTATTTTATATTTACATTATGTTTGTGGGGCTTACACTTGTTACTATGGGTGTAGTATAATAATGAGTCCCAAATTGTCTTTTTAGTAAGAGGAGAGTGAATAAATATTTTTATGCTATGCTTGGCTCATAAACACATTCACATGTGTTTCAAATCACAACTTATTACCC

mRNA sequence

AATACCGAATCAAAAACCAAGCAAGAGTGTGTTAAAACGCAAATTAATTAGGTAATAATTAAATTTAAGGATTGGTAATGGGGTCCTTCTCCGGTGCTTCAAAAGCTCTAATTGTGGGTGTGTTAGTGATCCTTCTTGTGAGTTGGGATGGTTTGATTGCCGGAGTTGGGGCAGCCGGAGAGTGTGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGACGCCGTGCCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCTCCTTTGGCTAAGCAGGTGGGAATAAACCCCGCCATTGCCATTACAGTCCCCAAGCGCTGCAACATCAGAAACCGGCCTGTCGGCAAGAAGTGCGGAAAGTACACTCTCCCTTGAGAACTAAAGTATAGCTACTCACAGCCACATGAAAAAAGTCGTTATGTTATAATTATGTCACATCATATTTCTGTACCCTAATAAATTAATATATATATCCATCGCAGTCAATGTCTAATGTTTGAGTTGTTTATTTTATATTTACATTATGTTTGTGGGGCTTACACTTGTTACTATGGGTGTAGTATAATAATGAGTCCCAAATTGTCTTTTTAGTAAGAGGAGAGTGAATAAATATTTTTATGCTATGCTTGGCTCATAAACACATTCACATGTGTTTCAAATCACAACTTATTACCC

Coding sequence (CDS)

ATGGGGTCCTTCTCCGGTGCTTCAAAAGCTCTAATTGTGGGTGTGTTAGTGATCCTTCTTGTGAGTTGGGATGGTTTGATTGCCGGAGTTGGGGCAGCCGGAGAGTGTGGGAAGACGCCGATAGAATCGGCGGCGGCGGGGCTGACGCCGTGCCTGGGGGCAGTTAGGGACGCAAAAGCTAAGGTTACGGCGGCGTGCTGCAGCAAAGTGGGGGCGATGTTTAATAGTTCTCCGAAATGCCTTTGCGCCATTCTTCTTTCTCCTTTGGCTAAGCAGGTGGGAATAAACCCCGCCATTGCCATTACAGTCCCCAAGCGCTGCAACATCAGAAACCGGCCTGTCGGCAAGAAGTGCGGAAAGTACACTCTCCCTTGA

Protein sequence

MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP

Homology

[Close]

BLAST of ClCG01G006880 vs. TrEMBL
Match: A0A0A0KJJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099500 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-51
Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 1


Query: 1   MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKA 60
           MGSFS ASK +IVG+ VI+LV W+     VGAAGECGKTPIESAA GLTPCLGAVRD KA
Sbjct: 2   MGSFSIASKGVIVGMFVIVLVVWE-----VGAAGECGKTPIESAAMGLTPCLGAVRDVKA 61

Query: 61  KVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGK 120
           KVT ACCSKVGAMFNSSPKCLCAILLSPLAKQ GINP IAIT+PKRCNIRNRP GKKCGK
Sbjct: 62  KVTGACCSKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPKGKKCGK 120

Query: 121 YTLP 125
           YTLP
Sbjct: 122 YTLP 120

[Close]

BLAST of ClCG01G006880 vs. TrEMBL
Match: A0A0B0P1H6_GOSAR (Non-specific lipid-transfer 4-like protein OS=Gossypium arboreum GN=F383_25025 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-37
Identity = 74/110 (67.27%), Postives = 91/110 (82.73%), Query Frame = 1


Query: 15  VLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMF 74
           VL +  +S + L++ VGAAGECG+TPI SAAA L+PCLGA R+A+AKV  ACC+KVGA+ 
Sbjct: 12  VLFLFWISLNALVSDVGAAGECGRTPIRSAAASLSPCLGAARNARAKVPPACCAKVGALL 71

Query: 75  NSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
            +SP+CLCAILLSPLAKQ GI P IAI +PK+CNIRNR  GKKCG+YT+P
Sbjct: 72  RTSPRCLCAILLSPLAKQAGIMPGIAIAIPKKCNIRNRQAGKKCGRYTVP 121

[Close]

BLAST of ClCG01G006880 vs. TrEMBL
Match: A0A0D2NP72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G170100 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-37
Identity = 74/110 (67.27%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 15  VLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMF 74
           VL +  +S + L+  VGAAGECG+TPI SAAA L+PCLGA R+A+AKV  ACC+KVGA+ 
Sbjct: 12  VLFLFWISLNALVCDVGAAGECGRTPIRSAAASLSPCLGAARNARAKVPPACCAKVGALL 71

Query: 75  NSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
            +SP+CLCAILLSPLAKQ GI P IAI +PK+CNIRNR  GKKCG+YT+P
Sbjct: 72  RTSPRCLCAILLSPLAKQAGIMPGIAIAIPKKCNIRNRQAGKKCGRYTVP 121

[Close]

BLAST of ClCG01G006880 vs. TrEMBL
Match: B9S7C4_RICCO (Lipid binding protein, putative OS=Ricinus communis GN=RCOM_0776490 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.2e-37
Identity = 77/116 (66.38%), Postives = 92/116 (79.31%), Query Frame = 1


Query: 9   KALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCS 68
           +A    VLV LL S +G ++ V AAGECGKTPI SAAA L+PCL AV + +A V  ACCS
Sbjct: 6   RACFAAVLVFLLAS-NGFLSDVDAAGECGKTPIRSAAASLSPCLTAVGNVRASVPPACCS 65

Query: 69  KVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
           KVGA+  ++PKCLCA+LLSPLA Q GI P IAIT+PKRCNI+NRPVGKKCG+YT+P
Sbjct: 66  KVGALIKTAPKCLCAVLLSPLAMQAGIKPGIAITIPKRCNIKNRPVGKKCGRYTVP 120

[Close]

BLAST of ClCG01G006880 vs. TrEMBL
Match: I1KX00_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G268400 PE=4 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 5.5e-37
Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 1


Query: 12  IVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVG 71
           +V +L+ LL S   ++   GA GECGKTPI SAAA L+PCLGAV + KAKV  ACC++VG
Sbjct: 13  LVALLMFLLASEVLILEAEGAGGECGKTPIGSAAASLSPCLGAVSNVKAKVPLACCARVG 72

Query: 72  AMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
           A+  ++P+CLCA+LLSPLAKQ  INPA AIT+PKRCNIRNRP GKKCG+YTLP
Sbjct: 73  ALLKTAPRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTLP 125

[Close]

BLAST of ClCG01G006880 vs. TAIR10
Match: AT2G37870.1 (AT2G37870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 142.5 bits (358), Expect = 1.7e-34
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 1


Query: 16  LVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFN 75
           L+ LL+S    +A V AAGECG+ PI  AAA L+PCL A ++ + KV   CC+KVGA+  
Sbjct: 11  LMSLLIS----LASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIR 70

Query: 76  SSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
           ++P+CLCA++LSPLAK+ GINP IAI VPKRCNIRNRP GK+CG+Y +P
Sbjct: 71  TNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115

[Close]

BLAST of ClCG01G006880 vs. TAIR10
Match: AT3G53980.1 (AT3G53980.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 3.9e-26
Identity = 54/113 (47.79%), Postives = 74/113 (65.49%), Query Frame = 1


Query: 12  IVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVG 71
           I+G+++++    DG       AGECG++  ++ A  L PC GA +DA + V   CC+++ 
Sbjct: 10  ILGLILLIGTVVDG-------AGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQI- 69

Query: 72  AMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
             F+ +PKCLCAILLS  AK  G++P +A+T+PKRCN  NRPVG KCG YTLP
Sbjct: 70  KRFSQNPKCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114

[Close]

BLAST of ClCG01G006880 vs. TAIR10
Match: AT5G05960.1 (AT5G05960.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 8.6e-26
Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 1


Query: 15  VLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMF 74
           +LV+ + S   ++ G   AGECG+ P +  A  L PC  A +D  AKV+A CC++V  M 
Sbjct: 11  LLVLCIYSLKTMVYG---AGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQM- 70

Query: 75  NSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
             +PKCLCA++LS  A+  G  P I++T+PKRCNI NRPVG KCG YTLP
Sbjct: 71  GQNPKCLCAVMLSSTARSSGAKPEISMTIPKRCNIANRPVGYKCGAYTLP 116

[Close]

BLAST of ClCG01G006880 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 3.1e-07
Identity = 26/83 (31.33%), Postives = 43/83 (51.81%), Query Frame = 1


Query: 43  SAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAK-QVGINPAIAI 102
           S    L+PCL  +       +  CCS++ ++  SSP+C+C+ + SP+    + IN   A+
Sbjct: 32  STLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNINRTQAL 91

Query: 103 TVPKRCNIRNRPVGKKCGKYTLP 125
            +P  CNI+  P+  +C   T P
Sbjct: 92  QLPNACNIQTPPL-TQCNAATGP 113

[Close]

BLAST of ClCG01G006880 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.8e-06
Identity = 23/76 (30.26%), Postives = 38/76 (50.00%), Query Frame = 1


Query: 43  SAAAGLTPCLGAVRDAKAKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGI--NPAIA 102
           +A   ++PCL  +          CC+++  +  SSP CLC + L+    Q+GI  N   A
Sbjct: 30  NALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQV-LNGGGSQLGINVNQTQA 89

Query: 103 ITVPKRCNIRNRPVGK 117
           + +P+ CN++  PV +
Sbjct: 90  LGLPRACNVQTPPVSR 104

[Close]

BLAST of ClCG01G006880 vs. NCBI nr
Match: gi|449466869|ref|XP_004151148.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-51
Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 1


Query: 1   MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKA 60
           MGSFS ASK +IVG+ VI+LV W+     VGAAGECGKTPIESAA GLTPCLGAVRD KA
Sbjct: 2   MGSFSIASKGVIVGMFVIVLVVWE-----VGAAGECGKTPIESAAMGLTPCLGAVRDVKA 61

Query: 61  KVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGK 120
           KVT ACCSKVGAMFNSSPKCLCAILLSPLAKQ GINP IAIT+PKRCNIRNRP GKKCGK
Sbjct: 62  KVTGACCSKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPKGKKCGK 120

Query: 121 YTLP 125
           YTLP
Sbjct: 122 YTLP 120

[Close]

BLAST of ClCG01G006880 vs. NCBI nr
Match: gi|659072702|ref|XP_008466820.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-49
Identity = 103/125 (82.40%), Postives = 109/125 (87.20%), Query Frame = 1


Query: 1   MGSFSGASKALIVGVLVILLVSWDGLIAGVGAAG-ECGKTPIESAAAGLTPCLGAVRDAK 60
           MGSFS ASK +IVG+ VI+LV W+     VGAAG ECGKTPIESAA GLTPCLGAVRD K
Sbjct: 2   MGSFSIASKGVIVGMFVIVLVVWE-----VGAAGGECGKTPIESAAMGLTPCLGAVRDVK 61

Query: 61  AKVTAACCSKVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCG 120
           AKVT ACC+KVGAMFNSSPKCLCAILLSPLAKQ GINP IAIT+PKRCNIRNRP GKKCG
Sbjct: 62  AKVTGACCNKVGAMFNSSPKCLCAILLSPLAKQAGINPGIAITIPKRCNIRNRPRGKKCG 121

Query: 121 KYTLP 125
           KYTLP
Sbjct: 122 KYTLP 121

[Close]

BLAST of ClCG01G006880 vs. NCBI nr
Match: gi|1009152261|ref|XP_015894002.1| (PREDICTED: non-specific lipid-transfer protein 1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-38
Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 9   KALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCS 68
           KA +V + V L VS + LI GV  AGECGKTPI SAAA L+PCLGA ++A+AK   ACCS
Sbjct: 6   KACLVSIFVFL-VSSNTLIYGVDGAGECGKTPIGSAAASLSPCLGAAKNARAKAPPACCS 65

Query: 69  KVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
           KVGA+ N +PKCLCA+LLSPLAK+ GINP IAI++PKRCNIRNRP GKKCG++ +P
Sbjct: 66  KVGALINRAPKCLCAVLLSPLAKKAGINPGIAISIPKRCNIRNRPAGKKCGRFVVP 120

[Close]

BLAST of ClCG01G006880 vs. NCBI nr
Match: gi|728839294|gb|KHG18737.1| (Non-specific lipid-transfer 4 -like protein [Gossypium arboreum])

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-37
Identity = 74/110 (67.27%), Postives = 91/110 (82.73%), Query Frame = 1


Query: 15  VLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCSKVGAMF 74
           VL +  +S + L++ VGAAGECG+TPI SAAA L+PCLGA R+A+AKV  ACC+KVGA+ 
Sbjct: 12  VLFLFWISLNALVSDVGAAGECGRTPIRSAAASLSPCLGAARNARAKVPPACCAKVGALL 71

Query: 75  NSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
            +SP+CLCAILLSPLAKQ GI P IAI +PK+CNIRNR  GKKCG+YT+P
Sbjct: 72  RTSPRCLCAILLSPLAKQAGIMPGIAIAIPKKCNIRNRQAGKKCGRYTVP 121

[Close]

BLAST of ClCG01G006880 vs. NCBI nr
Match: gi|502154136|ref|XP_004509596.1| (PREDICTED: uncharacterized protein LOC101514838 [Cicer arietinum])

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-37
Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = 1


Query: 9   KALIVGVLVILLVSWDGLIAGVGAAGECGKTPIESAAAGLTPCLGAVRDAKAKVTAACCS 68
           K  I  VL+ LL S   ++   GA GECGKTPI SAAA L+PCL A R+ +AKV++ACC 
Sbjct: 8   KTFIATVLIFLLASRVMILEADGA-GECGKTPIGSAAASLSPCLDATRNVRAKVSSACCG 67

Query: 69  KVGAMFNSSPKCLCAILLSPLAKQVGINPAIAITVPKRCNIRNRPVGKKCGKYTLP 125
           +VGA+  +SPKCLCA+LLSPLAKQ  INPAIAITVPKRCNIRNRP GKKCGKYTLP
Sbjct: 68  RVGALLTTSPKCLCAVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGKYTLP 122

The following BLAST results are available for this feature:

BLAST of ClCG01G006880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJJ0_CUCSA	1.3e-51	83.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099500 PE=4 SV=1	[more]
A0A0B0P1H6_GOSAR	1.9e-37	67.27	Non-specific lipid-transfer 4-like protein OS=Gossypium arboreum GN=F383_25025 P...	[more]
A0A0D2NP72_GOSRA	2.5e-37	67.27	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G170100 PE=4 SV=1	[more]
B9S7C4_RICCO	4.2e-37	66.38	Lipid binding protein, putative OS=Ricinus communis GN=RCOM_0776490 PE=4 SV=1	[more]
I1KX00_SOYBN	5.5e-37	66.37	Uncharacterized protein OS=Glycine max GN=GLYMA_08G268400 PE=4 SV=2	[more]

BLAST of ClCG01G006880 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37870.1	1.7e-34	59.63	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G53980.1	3.9e-26	47.79	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G05960.1	8.6e-26	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G48130.1	3.1e-07	31.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G22600.1	5.8e-06	30.26	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of ClCG01G006880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466869\|ref\|XP_004151148.1\|	1.9e-51	83.87	PREDICTED: protein YLS3 [Cucumis sativus]	[more]
gi\|659072702\|ref\|XP_008466820.1\|	1.4e-49	82.40	PREDICTED: protein YLS3 [Cucumis melo]	[more]
gi\|1009152261\|ref\|XP_015894002.1\|	7.1e-38	67.24	PREDICTED: non-specific lipid-transfer protein 1 isoform X1 [Ziziphus jujuba]	[more]
gi\|728839294\|gb\|KHG18737.1\|	2.7e-37	67.27	Non-specific lipid-transfer 4 -like protein [Gossypium arboreum]	[more]
gi\|502154136\|ref\|XP_004509596.1\|	2.7e-37	68.97	PREDICTED: uncharacterized protein LOC101514838 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006869	lipid transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0005504	fatty acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G006880.1	ClCG01G006880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 43..118 score: 5.6
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 44..113 score: 9.5
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 44..112 score: 1.2
None	No IPR available	PANTHER	PTHR33122	FAMILY NOT NAMED	coord: 7..124 score: 2.0
None	No IPR available	PANTHER	PTHR33122:SF8	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 7..124 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G006880	Csa5G099500	Cucumber (Chinese Long) v2	cuwcgB365
ClCG01G006880	MELO3C005225	Melon (DHL92) v3.5.1	mewcgB019
ClCG01G006880	Cla005830	Watermelon (97103) v1	wcgwmB143
ClCG01G006880	Cla97C01G007260	Watermelon (97103) v2	wcgwmbB089
ClCG01G006880	Bhi12G000871	Wax gourd	wcgwgoB191
ClCG01G006880	CSPI05G02040	Wild cucumber (PI 183967)	cpiwcgB380
ClCG01G006880	Cucsa.026470	Cucumber (Gy14) v1	cgywcgB656
ClCG01G006880	CmaCh04G021560	Cucurbita maxima (Rimu)	cmawcgB634
ClCG01G006880	CmoCh04G022530	Cucurbita moschata (Rifu)	cmowcgB636
ClCG01G006880	Cp4.1LG01g18720	Cucurbita pepo (Zucchini)	cpewcgB370
ClCG01G006880	CsGy5G012160	Cucumber (Gy14) v2	cgybwcgB333
ClCG01G006880	MELO3C005225.2	Melon (DHL92) v3.6.1	medwcgB018
ClCG01G006880	Carg17698	Silver-seed gourd	carwcgB0462
ClCG01G006880	CsaV3_5G017280	Cucumber (Chinese Long) v3	cucwcgB386

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G006880	Cucurbita maxima (Rimu)	cmawcgB260
ClCG01G006880	Cucurbita moschata (Rifu)	cmowcgB248
ClCG01G006880	Cucurbita pepo (Zucchini)	cpewcgB166
ClCG01G006880	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G006880	Silver-seed gourd	carwcgB0800