MELO3C005006.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C005006.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPhotosystem II reaction center PsbP family protein
Locationchr12 : 4733738 .. 4739539 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCTCATCATCGCCATTACCATTCTCCCAGTTTTTCAATTTTTTCTTCCTTCTCAACTCTCTCAAAATGGCCTCAGTCTCTGCTTTTACAATTTCCCCATCTTTCCCATTCTCTACCTCCCACAAACCTAAGAAGAAACCTATTTCCTCGTCCATCTTCTCTCAAAAGGGTTCTCAATTCGTGCCCCGACGGGAGATTTTGAAAGGATTCACTCTCCTTCCTCTTTCTTTCCCTCTTTTCCAATCCTTAAATCCACTTCCTTCTCTATCCAAAGAGATCGAAGTTGGCTCTTATCTCCCTCCCTCACCCTCTGACCCTTCTTTTGTCTTCTTCAAAGCTTCCCCAAGTGACACCCCGGCTCTTCGTGCAGGTATTATGACTTTTTTCTCTATTTTTTTTTTCCTTTACCGTAATTCGGTTGAATGTAGCTAAGTTGTTTCTTGTAAGTTCTTGTTATGAAATCATCTATTTTTTTTTTAAAAAAATAGAGTATAAAGTAAATAGTAGAGCACTCAATACTAAGATTTACTCGGTTGATTGTTAGCTATATACATGGTTTGGAGGGTTTTTTTATAACTCAGCGCTCCAAATTCTAGGGTCAAAATCATAATGATCTAAATACAAAAACAAAATAGGTTCGCGCGGATAAAGTCCATTTACCCTGACTAGCAAGACTTAGTTGTCCATTTACCATGACCAGCAATACTTGTGCTTGGTTATTAGAAGGGTTAGATAACAAATGGGGTTTACATTTATTGTTTGGAAAGTGGAAACCTCTTTAAGAATATTATGTTTCCCTATTTGATTCTTGGGCAATTTTGGTCCCTTAAGGTTAGGGTTGATGCTTATTTTGTATTTGAGGTTTCAAAAGAAACATTTTAGTCCCTCGCTTCTAAAATGATTCTAAATGAAATGATTAGTAAACAGTTATTTATGTAGATGGATTACCATTTTATTTATTTGATGATGTGGCCAATAAACTCAAAGTAAACCTTCTAAAAAATATAATGACGTTTGATATATTGAAATCTTTTCTTCTTCTTTGCCGATCGTTTCTTTCTGCTGCCCATTCGACCTGCAACTTTAAATGCAAGGGCGGATTTATTAAGGAACTGGCGGGGCATGTACCCCCACTCACATTATCGATTTTTGTATTTTAATATTAATTTTTAAATTGTGAGATTACAATATATGCTAAATAATGTTTTATTTTAAACAAAACATGGTTGTAGTACAGTGATTGCCCCCCATTCCTACAACTAATAGATTGTGAGTTTAAATCCTGCATTGGCAAACTTCAATATTTAAAATTTTTATATAAAATTTCTGCCACTATTTGAATGTAGTTGCTTGGCTGTCGAATTGCCAGCAGTCAAAGTCACTTGCTCACCTTCTTATCACTCTCAATTCCTTGACAATCCCTAATTTTGACCCACCAAATTCAAACTGCTGCAGAACAATTGAATTTTATTTGATTAAATTTCTATCCGTGGGAGGCTTCTGTATGCTGATCAACCTTGTTTTCTTTGAAAAATTTAAATTTCCATACACGATATATTGGGAAACTTTCACATTCCTCGGGACATTAAAAGCTCAAAAGCATTGATTTTGAGCAAAATGAAATTGAAAATCCTTTTTCCAGCAACACCATTTGACTGTGTTCATATTGAGAAAAATGGCACAACCATTTTATAATAAGTGCTTTTTTTTAAAAAAAAATAATTGAATTCAAATTATTCCATTGCAATGGAAGTAGTCGGAGCCGCACTAAAAGTTTTAGCACTTGTGGCGAGGAAGAAAGTGAGTATCAATAAAATGGCAGACTTGGTAATCAAATCTTCACCACCCATATCCATTTCAAGAGGTGTCGTCGTTTATGACAGGAGGCAAGTCGACAATGAACGATTGTAAAAAACTAAGTGGTTGTTGAGGCTCAAAGTGCAGAGAGGTGGGTAGTAAGAATGAACCGTGGGCAAAGAAGGAGATTTTTCACTATTTTAAATATATTATATTTTACTCACAGGTTTTACTTTTAAGTTAATTTGCCACCTAATCAAATAAAATGACATGTCAATCTAACCGAGTCAGCATATAAGGATATAATCCCATTATTTAGGGTAAAGTTAAATGAGGGACTATTTAGAACCATTTTGAAAATTTAAAAGACACTTTGTTTTGAGACTTTAAGGATCAAATAGACATCAACTCTAGATCTCAACGACCAAAAGTGCATTTTACCCTGATTCTTTGTTTTGCCTTAAGGATTCAAACTCAGAGTTCTGAACCAAACAGATTTTTGTTATTTTGGTTGTGGCTTGTGAGAATCAACTACTTTTTAGTTGGTTGTTTTGGATAACTGCTTCTCTGAACTTAGTTGGAAAACTACCTGTGAGTATTGGTTGCTGATCAGTTAACCTTCTATAATTTTGAAGTGGTTTGGCATAGCTGATGGTTTATGGCATAATTGCGTTGTGGATGATTTGGGGAGCGGAAAAGTAGGGTGTTTAGAAGGGTGGAAAGGAATCCTAGTGATATTTGGTTCCTCACTAGATTCCATGCTTTCCCGTTTTCTTTGAAAATATAGCCACTATTTTGTATGGTTAGAGTCTCTGTCTTTTGTGGGATTCTCCTTGTTGTGGGCTTGCCCTTTTTTTTTCCTTTCTGGTCCTCGTATTCTTTCACTTTTTTTCTCTCATTGAAAGTCGTTATTTCTATTAAAAGAAAAAAGGGTATAGCTGACAGTAGGTATTCCTTGAGACCTTGTGTTTGGGTCTGCATTACTTGAATCTAGCGAGTGATTGTATGTTTCTCTATGTACTTGCTGATTGATATATACAATAGTACTTGCTTCAAGCTGCTTTCTTGAAGCTGATACCTTTTTTCTTCCTCCTTGCGAAGATGATAACAACAAGAGTTTCAATGTCACTAATCAATCAAATGCTTCCCCTTGGAAGAGCTGTTTCATTTCCATGAGTCGCCTCCATTTCTAAGTTTAAAGTCTTCTCATCTCATCTATTGACGCAAATGAGAAGTTTTCTCCATGTTGGTCTTTCTAGAAATGCCTTTTGATTAGTTTTAGATGAATGTTAGACACTTGGAGCTCTTTTATAGTATAAACAATTGCTTCTATTGAGAAAAAATGAAAAAAGTACGAGGGCTTATTGAATGTTCTTTTGTTTATGTGAGAAATTAAAGATTCAAAAGAATACCAAACATCATTTGTTTCACTTTTTAAATTTCCTCTGGATTCTGGATAGCAGGCTGATTCTGAACTAAATATGACAATTACGTGCTGTTGTGCCACCCAATCTTCAGTTTCATTGTGTAGGAAACTTGCCGATGCTAATACCTTCTAGATTTTTACCGTATGTATGGCACAATAGTTCAGATGACAGTTATTTCTTTATTGTGAGAGATCACATCCAGTTATATACATTTTTATCCTTAACGTATTAGTCTCTATCTTTTGCTTCTGAAATTATGAAATCAATCCTATCTAGGACTGATGCACTGAGCACATTATTGCTTAGAATGCTCTTCTTTTTCGTTTTCTTCTAAGTTGTTAAATAATTTATATGCTAATGGTACTTGAGATTTAGTTCTTTGCAGGAAATGTGCAACCATACCAGTTCATTCTGCCCCCAACTTGGAAACAAACGCGCGTAGCTAATATTTTATCTGGTAATTACTGTCAACCCAAGTGTGCGGAGCCTTGGGTGGAGGTAAAATTTGAAGATGACAAACAAGGGAAAATCCAGGTAGTGGCTTCCCCTTTAATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGCCCTGAGAAGGTAATCGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCTGACGAACTTCTTGAATCATCGGTGGAGAAACTTGGTGATCAAACGGTATTATTTTTTTCTTATGATCTTTCTTATAGAGATATGATATTTGTTACCCGCACTGCAGTAAATTGTTTTTCTAAGAGACATGTAGTTCAGTCCTACTTATCTTTTAAAAGCTTTTTTCATGAACTTTAGATAACACTTTTAGGGATAATAATTAAATATATAACAAAATCTATTAATTATAGATTCTATTGGTAATGCACTCCTATTAGTGATTATAGACTTTGAGAGCTAGATTGAAATTTTGGTACATCTACAAATTCTTTTGCATTGTGCTATATTTGTTAATACTAAATACCTTATTGTTATACTTGCTACTCTCTTTGTTAAAACTTACCAAATGTAAATACCAATTACCATTACAAAGAAATGGCAAAAGTCCAATGTGATTGATTGCACTCTGAAATAAGATTAGCCTAGCCTCCTCTCTACTCTTTGATCACAATAATGTTTGTAAAATCCATTCAAAAAGTTCGTGTTCTTTTCCCTAGTTCACATTACTTTTCATTACCTTGTGTTAAAATGAAATGATACATTGTAACATCCATAATGATTTTGACGAAAAATGTTGGTCTCTAAGTTTAAGGTCTAATTTCTATTTAGTTCCTAGAATTCAACATGTTACATGTTTAGTCCTTTGGTTTTGAGGTTCAATTTAGTTCATTGATTTCAAAGTATTACAATTGTACTCTTAAAATTTGAGTTTTGTTTTGATTTGATCCCTAAGTCTGAAGATTTATACTTTGAACCTTGATTACTCACTAAATATTCACTTTCCATCTTTAGTGTTAATTTCTATGAATTAATTTAAAACTCAAATCTCAAGGGTAAAACTGAACATTTTGAAACCCAGGGACTATATTGAAGCCAAACTCTCTAGACTCTATGAACAAATGTGTAACATTTTGAAATCTAAAAACCAAATGGAAACTAAAACCAAAACCTAGTGACCAAAAAGATGTTTATCCCATAATTTTACGAAGTCAGGTTTCTTGTACTCATTACTAAACATAACATAGGATGATAATGAAACTTTCAAAAGCAGAGATTAAGAAGTACTACAATTGTAATACAACCTAGAGTTTATATAGCAGTTTCTTCTGAGTTTAGTACTTCAAGTTAGATCAAGTTCATCTTTTAACTCTACTTTGATGATGAATACTCAATATAGGAAGCTGTTTTTATGTGGTTTATGCAGTATTACAAATACACATTGGAAACTCCTTATGCTTTGACGGGTACACACAATCTGGCTAAGGCAACGGCAAAAGGAAGCACCGTTGTGTTATTTGTGGCCAGTGCTAATGATAAACAATGGCAGGCTTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTCGGCTCTAATTCCTTTCAACACTACATTCAAAATCAGGTTATATTTATTTTATAATGTTTCATTTATGCTTCTATCTTCACATTTACTAAATAAAATACTTTGAGTTCTTCAACATTCCTGTCGCACCATAGCTTTATTTAATGGGTGATTTATTTACTTTCTTGGGTGATGGTTGAGTCATGACTTAATGGATTTGTCAGAATTGAAGTTGAAATTGTGCAAAGAAAGAGCTGGCTATTGTATTTTTGGGCTATTGTTTAATCTATTCAATTATTTTTCATTCACTCTAACAGGTAATATGTGGATGGAAATGTGAACCATTGATCTTTTTGGTGGAGGCTAAGTTTCTCAAGATGGGCCTTTCTCACCTTGATTTTATTTTTTTTACGTTAGTACGTAAATTTTGATATTTGTATCTATTGAATATTTTTCATGTTTAATAAACTTTTGAACTATAAAATATATTTCGTGAGTTCTCAATTTCTTTTTGAAATGGTCTTATGTATCCAATTT

mRNA sequence

AACTCTCATCATCGCCATTACCATTCTCCCAGTTTTTCAATTTTTTCTTCCTTCTCAACTCTCTCAAAATGGCCTCAGTCTCTGCTTTTACAATTTCCCCATCTTTCCCATTCTCTACCTCCCACAAACCTAAGAAGAAACCTATTTCCTCGTCCATCTTCTCTCAAAAGGGTTCTCAATTCGTGCCCCGACGGGAGATTTTGAAAGGATTCACTCTCCTTCCTCTTTCTTTCCCTCTTTTCCAATCCTTAAATCCACTTCCTTCTCTATCCAAAGAGATCGAAGTTGGCTCTTATCTCCCTCCCTCACCCTCTGACCCTTCTTTTGTCTTCTTCAAAGCTTCCCCAAGTGACACCCCGGCTCTTCGTGCAGGAAATGTGCAACCATACCAGTTCATTCTGCCCCCAACTTGGAAACAAACGCGCGTAGCTAATATTTTATCTGGTAATTACTGTCAACCCAAGTGTGCGGAGCCTTGGGTGGAGGTAAAATTTGAAGATGACAAACAAGGGAAAATCCAGGTAGTGGCTTCCCCTTTAATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGCCCTGAGAAGGTAATCGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCTGACGAACTTCTTGAATCATCGGTGGAGAAACTTGGTGATCAAACGTATTACAAATACACATTGGAAACTCCTTATGCTTTGACGGGTACACACAATCTGGCTAAGGCAACGGCAAAAGGAAGCACCGTTGTGTTATTTGTGGCCAGTGCTAATGATAAACAATGGCAGGCTTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTCGGCTCTAATTCCTTTCAACACTACATTCAAAATCAGGTAATATGTGGATGGAAATGTGAACCATTGATCTTTTTGGTGGAGGCTAAGTTTCTCAAGATGGGCCTTTCTCACCTTGATTTTATTTTTTTTACGTTAGTACGTAAATTTTGATATTTGTATCTATTGAATATTTTTCATGTTTAATAAACTTTTGAACTATAAAATATATTTCGTGAGTTCTCAATTTCTTTTTGAAATGGTCTTATGTATCCAATTT

Coding sequence (CDS)

ATGGCCTCAGTCTCTGCTTTTACAATTTCCCCATCTTTCCCATTCTCTACCTCCCACAAACCTAAGAAGAAACCTATTTCCTCGTCCATCTTCTCTCAAAAGGGTTCTCAATTCGTGCCCCGACGGGAGATTTTGAAAGGATTCACTCTCCTTCCTCTTTCTTTCCCTCTTTTCCAATCCTTAAATCCACTTCCTTCTCTATCCAAAGAGATCGAAGTTGGCTCTTATCTCCCTCCCTCACCCTCTGACCCTTCTTTTGTCTTCTTCAAAGCTTCCCCAAGTGACACCCCGGCTCTTCGTGCAGGAAATGTGCAACCATACCAGTTCATTCTGCCCCCAACTTGGAAACAAACGCGCGTAGCTAATATTTTATCTGGTAATTACTGTCAACCCAAGTGTGCGGAGCCTTGGGTGGAGGTAAAATTTGAAGATGACAAACAAGGGAAAATCCAGGTAGTGGCTTCCCCTTTAATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGCCCTGAGAAGGTAATCGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCTGACGAACTTCTTGAATCATCGGTGGAGAAACTTGGTGATCAAACGTATTACAAATACACATTGGAAACTCCTTATGCTTTGACGGGTACACACAATCTGGCTAAGGCAACGGCAAAAGGAAGCACCGTTGTGTTATTTGTGGCCAGTGCTAATGATAAACAATGGCAGGCTTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTCGGCTCTAA

Protein sequence

MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFRL
Homology
[Close]
BLAST of MELO3C005006.2 vs. NCBI nr
Match: XP_008463519.1 (PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis melo])

HSP 1 Score: 523.5 bits (1347), Expect = 4.2e-145
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60
           MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS
Sbjct: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFRL 264
           SANDKQWQASEKVLRTMLDSFRL
Sbjct: 241 SANDKQWQASEKVLRTMLDSFRL 263

[Close]
BLAST of MELO3C005006.2 vs. NCBI nr
Match: XP_004147270.1 (PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis sativus] >KGN64757.1 hypothetical protein Csa_1G088470 [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 1.2e-136
Identity = 250/263 (95.06%), Postives = 252/263 (95.82%), Query Frame = 0 

Query: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60
           MAS SAFTISPSFPFSTS  PK KPISSSI SQ  SQFVPRREILK FTLLPLSFPLF S
Sbjct: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKAS SDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQ+VASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDP+ELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFRL 264
           SANDKQWQASEKVLRTMLDSF L
Sbjct: 241 SANDKQWQASEKVLRTMLDSFHL 263

[Close]
BLAST of MELO3C005006.2 vs. NCBI nr
Match: XP_023521520.1 (psbP domain-containing protein 6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 2.5e-129
Identity = 234/262 (89.31%), Postives = 248/262 (94.66%), Query Frame = 0 

Query: 2   ASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQSL 61
           ++ SAF ISPS P ++  KPK+KPIS ++F Q+GSQFV RREILKG TLLPLS PLF+S+
Sbjct: 3   SAASAFAISPSLPTASCRKPKRKPISPAVFCQRGSQFVHRREILKGLTLLPLSLPLFESV 62

Query: 62  NPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRVA 121
           +PLPS SKEIEVGSYLPPS SDPSFVFFKASP DTPALRAGNVQPYQFILPPTWKQTRVA
Sbjct: 63  HPLPSQSKEIEVGSYLPPSQSDPSFVFFKASPRDTPALRAGNVQPYQFILPPTWKQTRVA 122

Query: 122 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 181
           NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL
Sbjct: 123 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 182

Query: 182 GPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS 241
           GPFVTG+TYDP+ELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS
Sbjct: 183 GPFVTGNTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS 242

Query: 242 ANDKQWQASEKVLRTMLDSFRL 264
           ANDKQWQASEKVLRTMLDSF+L
Sbjct: 243 ANDKQWQASEKVLRTMLDSFQL 264

[Close]
BLAST of MELO3C005006.2 vs. NCBI nr
Match: XP_022948517.1 (psbP domain-containing protein 6, chloroplastic [Cucurbita moschata])

HSP 1 Score: 465.3 bits (1196), Expect = 1.4e-127
Identity = 233/262 (88.93%), Postives = 246/262 (93.89%), Query Frame = 0 

Query: 2   ASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQSL 61
           ++ SAF ISPS P ++  KPK+KPIS +IF Q+GSQF  RREILKG TLLPLS PLF+S+
Sbjct: 3   SAASAFAISPSLPTASCRKPKRKPISPAIFCQRGSQFGHRREILKGLTLLPLSLPLFESV 62

Query: 62  NPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRVA 121
           +PL S SKEIEVGSYLPPS SDPSFVFFKASP DTPALRAGNVQPYQFILPPTWKQTRVA
Sbjct: 63  HPLSSESKEIEVGSYLPPSQSDPSFVFFKASPRDTPALRAGNVQPYQFILPPTWKQTRVA 122

Query: 122 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 181
           NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL
Sbjct: 123 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASL 182

Query: 182 GPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS 241
           GPFVTG+TYDP+ELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS
Sbjct: 183 GPFVTGNTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS 242

Query: 242 ANDKQWQASEKVLRTMLDSFRL 264
           ANDKQWQASEKVLRTMLDSF+L
Sbjct: 243 ANDKQWQASEKVLRTMLDSFQL 264

[Close]
BLAST of MELO3C005006.2 vs. NCBI nr
Match: XP_022152863.1 (psbP domain-containing protein 6, chloroplastic [Momordica charantia])

HSP 1 Score: 460.7 bits (1184), Expect = 3.4e-126
Identity = 230/263 (87.45%), Postives = 244/263 (92.78%), Query Frame = 0 

Query: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60
           MAS SAFT  PSFP ST  KPK+K IS +IF ++ SQF  RREILKG +L PLS PLF+S
Sbjct: 1   MASASAFTFPPSFPSSTCRKPKRKAISPAIFCRRSSQFGLRREILKGLSLFPLSLPLFES 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120
           + PLPS SKE+EVGSYLPPS SDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  IIPLPSESKEVEVGSYLPPSQSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTG++YDP+ELLE+SVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGNSYDPEELLEASVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFRL 264
           SANDKQW ASEK+LRTMLDSF+L
Sbjct: 241 SANDKQWPASEKILRTMLDSFQL 263

[Close]
BLAST of MELO3C005006.2 vs. TAIR10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-95
Identity = 164/212 (77.36%), Postives = 189/212 (89.15%), Query Frame = 0 

Query: 53  LSFPLFQSLNPLP-SLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFIL 112
           ++ P    L   P S ++E+EVGSYLP SPSDPSFV FKA PSDTPALRAGNVQPYQF+L
Sbjct: 51  VAIPAILQLKEAPISAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVL 110

Query: 113 PPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDI 172
           PP WKQ R+ANILSGNYCQPKCAEPW+EVKFE++KQGK+QVVASPLIRLTNKPNATIED+
Sbjct: 111 PPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDL 170

Query: 173 GSPEKVIASLGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAK 232
           G PEKVIASLGPFVTG++YD DELL++S+EK+GDQTYYKY LETP+ALTG+HNLAKATAK
Sbjct: 171 GEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAK 230

Query: 233 GSTVVLFVASANDKQWQASEKVLRTMLDSFRL 264
           GSTVVLFV SA +KQWQ+S+K L  +LDSF+L
Sbjct: 231 GSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]
BLAST of MELO3C005006.2 vs. Swiss-Prot
Match: sp|Q9LXX5|PPD6_ARATH (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.3e-94
Identity = 164/212 (77.36%), Postives = 189/212 (89.15%), Query Frame = 0 

Query: 53  LSFPLFQSLNPLP-SLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFIL 112
           ++ P    L   P S ++E+EVGSYLP SPSDPSFV FKA PSDTPALRAGNVQPYQF+L
Sbjct: 51  VAIPAILQLKEAPISAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVL 110

Query: 113 PPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDI 172
           PP WKQ R+ANILSGNYCQPKCAEPW+EVKFE++KQGK+QVVASPLIRLTNKPNATIED+
Sbjct: 111 PPNWKQLRIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDL 170

Query: 173 GSPEKVIASLGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAK 232
           G PEKVIASLGPFVTG++YD DELL++S+EK+GDQTYYKY LETP+ALTG+HNLAKATAK
Sbjct: 171 GEPEKVIASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAK 230

Query: 233 GSTVVLFVASANDKQWQASEKVLRTMLDSFRL 264
           GSTVVLFV SA +KQWQ+S+K L  +LDSF+L
Sbjct: 231 GSTVVLFVVSATEKQWQSSQKTLEAILDSFQL 262

[Close]
BLAST of MELO3C005006.2 vs. TrEMBL
Match: tr|A0A1S3CJG7|A0A1S3CJG7_CUCME (psbP domain-containing protein 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501655 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.8e-145
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 

Query: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60
           MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS
Sbjct: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFRL 264
           SANDKQWQASEKVLRTMLDSFRL
Sbjct: 241 SANDKQWQASEKVLRTMLDSFRL 263

[Close]
BLAST of MELO3C005006.2 vs. TrEMBL
Match: tr|A0A0A0LVB3|A0A0A0LVB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088470 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 8.2e-137
Identity = 250/263 (95.06%), Postives = 252/263 (95.82%), Query Frame = 0 

Query: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60
           MAS SAFTISPSFPFSTS  PK KPISSSI SQ  SQFVPRREILK FTLLPLSFPLF S
Sbjct: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKAS SDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQ+VASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDP+ELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFRL 264
           SANDKQWQASEKVLRTMLDSF L
Sbjct: 241 SANDKQWQASEKVLRTMLDSFHL 263

[Close]
BLAST of MELO3C005006.2 vs. TrEMBL
Match: tr|A0A1S3TBM0|A0A1S3TBM0_VIGRR (psbP domain-containing protein 6, chloroplastic OS=Vigna radiata var. radiata OX=3916 GN=LOC106753811 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 3.1e-104
Identity = 186/228 (81.58%), Postives = 208/228 (91.23%), Query Frame = 0 

Query: 36  SQFVPRREILKGFTLLPLSFPLFQSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSD 95
           SQ++PRRE LKG  L+PL  PL     P PS ++E+EVGS+LPPSPSDPSFV F ASP D
Sbjct: 43  SQYIPRREFLKGLALMPL--PLVVLREPPPSHAREVEVGSFLPPSPSDPSFVLFTASPKD 102

Query: 96  TPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVAS 155
           TPALRAGNVQPY+F+LPPTWKQ RVANILSGNYCQPKCAEPWVEVKFED+KQGK+QVVAS
Sbjct: 103 TPALRAGNVQPYKFLLPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVAS 162

Query: 156 PLIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLET 215
           PLIRLTNKPNATIEDIGSPEK+IASLGPFVTG+T+DP+ELLE+SVEKLGDQTYYKY LET
Sbjct: 163 PLIRLTNKPNATIEDIGSPEKLIASLGPFVTGNTFDPEELLETSVEKLGDQTYYKYVLET 222

Query: 216 PYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFRL 264
           PYALTGTHNLAKATAKG+TVVLFV SANDKQWQ SE+ L+T+LDSF++
Sbjct: 223 PYALTGTHNLAKATAKGNTVVLFVVSANDKQWQTSEETLKTVLDSFQV 268

[Close]
BLAST of MELO3C005006.2 vs. TrEMBL
Match: tr|A0A1S2XTE7|A0A1S2XTE7_CICAR (psbP domain-containing protein 6, chloroplastic OS=Cicer arietinum OX=3827 GN=LOC101504678 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 4.5e-103
Identity = 187/227 (82.38%), Postives = 202/227 (88.99%), Query Frame = 0 

Query: 37  QFVPRREILKGFTLLPLSFPLFQSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDT 96
           Q  PRR+ LKG  L  LS PL    NPL S ++EIEVGS+LPPS SDPSFV FKAS  DT
Sbjct: 57  QHTPRRDFLKGIALQTLSLPLLVLTNPLHSQAREIEVGSFLPPSSSDPSFVLFKASSKDT 116

Query: 97  PALRAGNVQPYQFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASP 156
           PALRAGNVQPYQF+LPPTWKQ RVANILSGNYCQPKCAEPWVEVKFED+KQGKIQVVASP
Sbjct: 117 PALRAGNVQPYQFLLPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKIQVVASP 176

Query: 157 LIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETP 216
           LIRLTNKPNATIEDIGSPEKVIASLGPFVTG+T DPDELLE+S+EKL DQTYYKY LETP
Sbjct: 177 LIRLTNKPNATIEDIGSPEKVIASLGPFVTGNTLDPDELLETSIEKLDDQTYYKYVLETP 236

Query: 217 YALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFRL 264
           YALTG+HNLAKATAKG+TVVLFV SANDKQWQ SEK L++MLDSF++
Sbjct: 237 YALTGSHNLAKATAKGNTVVLFVVSANDKQWQTSEKTLKSMLDSFKV 283

[Close]
BLAST of MELO3C005006.2 vs. TrEMBL
Match: tr|A0A251K2I2|A0A251K2I2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G000200 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 5.9e-103
Identity = 197/266 (74.06%), Postives = 219/266 (82.33%), Query Frame = 0 

Query: 1   MASVSAFTISPSFPFSTSHK---PKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPL 60
           MA+ S   ISP F  STS K       P   +++ Q  S    RR+IL G  L PL    
Sbjct: 1   MATASLSPISPVFSISTSQKSPITTSTPTPPTVWHQTRSYSSLRRQILHGLALSPLILIK 60

Query: 61  FQSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQ 120
             ++    S +KE+EVGSYLPPS SDPSFV FKA+P DTPALRAGNVQPYQFILPPTWKQ
Sbjct: 61  ETAI----SEAKEVEVGSYLPPSSSDPSFVLFKATPKDTPALRAGNVQPYQFILPPTWKQ 120

Query: 121 TRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKV 180
           TRVANILSGNYCQPKCAEPWVEVKFED+KQGK+QVVASPLIRLTNKPNA+IE+IGSPEK+
Sbjct: 121 TRVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEEIGSPEKL 180

Query: 181 IASLGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVL 240
           IASLGPFVTG++YDPDELLE+S+EKLGDQTYYKY LETPYALTGTHNLAKATAKGSTVVL
Sbjct: 181 IASLGPFVTGNSYDPDELLETSIEKLGDQTYYKYVLETPYALTGTHNLAKATAKGSTVVL 240

Query: 241 FVASANDKQWQASEKVLRTMLDSFRL 264
           FVASANDKQWQ SEK L+ +LDSF+L
Sbjct: 241 FVASANDKQWQTSEKTLKAILDSFQL 262

The following BLAST results are available for this feature:
BLAST of MELO3C005006.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463519.14.2e-145100.00PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis melo][more]
XP_004147270.11.2e-13695.06PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis sativus] >KG... [more]
XP_023521520.12.5e-12989.31psbP domain-containing protein 6, chloroplastic-like [Cucurbita pepo subsp. pepo... [more]
XP_022948517.11.4e-12788.93psbP domain-containing protein 6, chloroplastic [Cucurbita moschata][more]
XP_022152863.13.4e-12687.45psbP domain-containing protein 6, chloroplastic [Momordica charantia][more]
BLAST of MELO3C005006.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56650.11.3e-9577.36Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein[more]
BLAST of MELO3C005006.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LXX5|PPD6_ARATH2.3e-9477.36PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of MELO3C005006.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CJG7|A0A1S3CJG7_CUCME2.8e-145100.00psbP domain-containing protein 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LVB3|A0A0A0LVB3_CUCSA8.2e-13795.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088470 PE=4 SV=1[more]
tr|A0A1S3TBM0|A0A1S3TBM0_VIGRR3.1e-10481.58psbP domain-containing protein 6, chloroplastic OS=Vigna radiata var. radiata OX... [more]
tr|A0A1S2XTE7|A0A1S2XTE7_CICAR4.5e-10382.38psbP domain-containing protein 6, chloroplastic OS=Cicer arietinum OX=3827 GN=LO... [more]
tr|A0A251K2I2|A0A251K2I2_MANES5.9e-10374.06Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G000200 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009654photosystem II oxygen evolving complex
GO:0009523photosystem II
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR002683PsbP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010027 thylakoid membrane organization
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0031977 thylakoid lumen
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005006.2.1MELO3C005006.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP familyPFAMPF01789PsbPcoord: 106..262
e-value: 3.3E-12
score: 46.7
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3DG3DSA:3.40.1000.10coord: 102..263
e-value: 2.5E-14
score: 55.5
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILYSSF55724Mog1p/PsbP-likecoord: 102..263
NoneNo IPR availablePANTHERPTHR31407:SF14PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTICcoord: 62..262
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 62..262

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005006.2Csa1G088470Cucumber (Chinese Long) v2cumedB010
MELO3C005006.2CSPI01G12900Wild cucumber (PI 183967)cpimedB011
MELO3C005006.2Cucsa.207420Cucumber (Gy14) v1cgymedB371
MELO3C005006.2CmaCh13G001970Cucurbita maxima (Rimu)cmamedB215
MELO3C005006.2CmaCh01G005320Cucurbita maxima (Rimu)cmamedB451
MELO3C005006.2CmoCh13G001990Cucurbita moschata (Rifu)cmomedB203
MELO3C005006.2CmoCh01G005620Cucurbita moschata (Rifu)cmomedB439
MELO3C005006.2Lsi02G014440Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C005006.2Cp4.1LG02g12870Cucurbita pepo (Zucchini)cpemedB581
MELO3C005006.2CsGy1G012980Cucumber (Gy14) v2cgybmedB009
MELO3C005006.2Cla005055Watermelon (97103) v1medwmB143
MELO3C005006.2ClCG03G002390Watermelon (Charleston Gray)medwcgB141
MELO3C005006.2Cla97C03G053420Watermelon (97103) v2medwmbB142
MELO3C005006.2Bhi08G000251Wax gourdmedwgoB176
MELO3C005006.2CsaV3_1G013070Cucumber (Chinese Long) v3cucmedB009
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005006.2Silver-seed gourdcarmedB0451
MELO3C005006.2Watermelon (97103) v2medwmbB140
MELO3C005006.2Wax gourdmedwgoB156
MELO3C005006.2Cucurbita maxima (Rimu)cmamedB640
MELO3C005006.2Cucurbita moschata (Rifu)cmomedB628
MELO3C005006.2Cucurbita pepo (Zucchini)cpemedB314
MELO3C005006.2Melon (DHL92) v3.6.1medmedB034
MELO3C005006.2Bottle gourd (USVL1VR-Ls)lsimedB064
MELO3C005006.2Watermelon (Charleston Gray)medwcgB140
MELO3C005006.2Watermelon (97103) v1medwmB174