Csa1G088470 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G088470
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionThylakoid lumenal 20 kDa protein; contains IPR002683 (Photosystem II PsbP, oxygen evolving complex)
LocationChr1 : 8336807 .. 8340949 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACGTGGAAACTCTCATCATCATCGCCATTACCATTCTCACAGTTTTTCAATTTCTTCTTCCTTCTCAACTCTCTCCAATATGGCCTCTGCCTCTGCTTTTACAATTTCCCCATCTTTCCCATTCTCCACCTCCCGCACACCTAAGAACAAACCTATTTCCTCATCCATCTCCTCTCAAAACGCTTCTCAATTCGTGCCCCGGAGGGAGATTTTGAAACGATTCACTCTCCTTCCTCTTTCTTTCCCTCTTTTCCATTCCTTAAATCCACTTCCTTCTCTATCCAAGGAGATCGAAGTTGGCTCTTATCTCCCTCCCTCACCCTCTGACCCTTCTTTTGTCTTCTTCAAAGCTTCCCAAAGTGACACTCCGGCTCTTCGTGCAGGTATTCTGACTTTTTTTCTCTATTTTTTTTCTTTACCGTTATTCGGTTGAGTGTAGCTAAATTGTTTCTTGTTACTTCTTGTTATGAAATCATCAAATTAAAAAAGAAAAGAATATAAAGTAACTAGTAGAGCACTAGATACGAAGATTTACTTGGTTGATTGTTAGCTATATACATGGTTTAGAGGGTTTTTATATATGACCACTCGAAATTCTAGGCTCAAAATCATAATGAGCTAAATACCAAAACAAAATAGGTTCGACCCATACCAACAAGATGTGTTGTCCATTTACCATAACTAGCAAGACTTGTGCTTGGTCACTCGAAGGGTTAAATAGCAAATGGGGTTTGCATTTTATTGTTTGGAAAGTGAAAACCTCTTGAGAATATTATGTTTCCCTATTTGTTTTTTGGAAAACAAAATGCAATTTTGGTAGTTTCTCTATTTGGTAATTGAGGTTTCAAAAGAAATATTTTAGTGTCTTGGATGGATTTAGCATTTTATTTATTTGATGGCGTGGCCAATAAACTCATAAAGTAAACCTCATTTGATATATTGAAATCTTTTGTTCTTCTTCGCCCATCGATTCTTGCCCATTTGACCTTCAACTTTGAGTGTAGTTGCTTGGCTGTCGAATTGCCACCAGTCAAAGTCAGTCGCTCACCTTCTTATCACTCTCAATTTCCTTCACATTCCCTAATTTTTACCCATCAAATCCATCAAATTCAAACTGCTACAGAACAATTGAATTTTATTTTATTAATTTTTTATCCATGGGTGGCTTCTGTACGCTGATCACCTTTATTTTCTTTGAAAAATTTAAAATTCCATACACGATATGTTGGGAAATTTTCACATTCTTCATGACATTAAAAGCTCAAAAGCATTTATTTTGAGCTAAATAAAAATGAAAATCCCTTCTCCAGCGACACCATGTGTTCCTACGGAGAAAAATGGCAAAACCATTTTATATGAAGTGCTTTTTTATTTTTTTTAAAAAAAGAAAAAGAATTGAATTCAAATTATTCCATTGCAATGGAAGTAGTCGGAGCCGCACAAAAAGTTTCAGCAGTTGTGGCGAGGAAGAAAGTGAGTATCAATAAAATGGCAGACTTAGTAATCAAATCTTCACGACCCACATCCAATTCAAGAGGTGTCGTGGTCTGTGACAGGAGGCAAGTCGACAATGAACGATTGTCAAAAACAAGTGGTTGTTGAGGCTCAAAGTGCGGAGAGGTGGGTAGTAAGAATGAACCATGGGAAAAGAAGGAGGTTTTTCACTATTTTAAATATATTATATTTTACTTACAGGTTTAATTTTTAAGTTAATTTGCCAACTAATCAAATAAAATGACATCTCAATGTAAATGTCTAATCACTATTTTGTTAGGGTAAAGTTAACTGAGATACCATTTAGAATCATTTTGAATATATGGACACAATTGTTTGTTTTAAAACTTTCAAATAGACATCAGCCCCTAGACCTTAGAGAGCAAATGTGCATTTTACCTTGATTCTTTGTTTTACGTCAAGGATTCGAACTCAGAGTTACGAACCAAACAGATTTTTAATATTTTGGTCATGACTTGTGAGAATCAAATACTCTTTGGTTGGCTGTTTTAGATAACTGCTTCTCTTAACTTGGTTGGTAAACTATCTGTGAGTATGCCTTCTGATTAGTTTTTGATGAATGTTAAGACACTTGGAGCTTTTTTATAGTATAAACAATTGCTTCTATTGAGAAAAAATGAAGGCTTATTGAATGTCCTCTTGTTTATGTGAGAAATTAAAGATTAAAAAAAGTACCAAACATCATTCGATTCACTTTTTAAATTTCCTTTGGATTCTGGATAGCAGGCTGATTCTGAACTAAATATGACAATTACGTGCTGTTGTGCCATCCAATCTTCAGTTTCGTTGTGTAGGAAACCTGCCAATGCTAATACCTTCTAGATTTTTACCATACGTATGGCACAATAGTTCAGATGACAGTTATTTTTTTATTGTGAGAGATCACGTCCAGTTATATACATTTTTAACCTTAACATAATAGTCTCCATCTTTTGCTTCTGAAATTATGAAATCAATCCTATCTAGGACGGATGCACTGAACACAATATTGCTTAGAATGTTCCTTCTTTTTCGATTTTTTCCAAGTTGTTCAATAATTTATATGCTAATGGTACTTGAGATTTAGTTCTTTGCAGGAAATGTGCAACCATACCAGTTCATTCTGCCCCCAACTTGGAAACAAACTCGTGTAGCTAATATTTTATCTGGAAATTACTGTCAACCTAAGTGTGCAGAGCCTTGGGTGGAGGTAAAATTTGAAGATGACAAACAAGGCAAAATCCAGATAGTGGCTTCCCCTTTAATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGCCCAGAGAAGGTAATCGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCTGAGGAACTCCTTGAATCATCAGTTGAGAAACTTGGCGATCAAACGGTATTATCCTCCTGTGTCTTTTATACATCATTATTTTCTTTTTCTTATGATCTTTCTTGATATGATACTTGCTTACCCGCACTGCAGTAAAAAATCTATTAACTATAGACTCTATCCTATTAGTGATTACTAGATCGAAATTTTGGTACATTTACAAATTCTACTGTATTGTGTTATATTTGTTAATACTATATGCCTTGTCGTTATATTTGCAACTCTCCTTGTTAAAACTTACCAAATGTAAATACCAATTACTGTTAGAAAGAAATGGCAAAAGTCCCATGTGATTGATTGCACTCTGAAATAAGATTAGCCTAGCCTCCTCTCTACTCTTTGATCACAATAATGTTTTTAAAATCCGTCCAAAAAGTTTGTGTTCTTTTCCCCACTTCACATTACTTTTCATTACCTTGGGTTAAAATGAAATGATACGTTGTAACATCCATAAATAATTTTGACAAAAGGTGTCTTTTTGGTCTCTATGTTCAAAGTCAAGTTTCTATTTAGTCCCTAGAATTCAACATGTTATGTATTTTGTCCTTTGGTTTTGAGGTTCAATTTAGTACATTTATTTCAAAGGATCACATTTCTACCTTTGAGATTTGAGTTTTGTTTCAATTTGGTCCCTAAATTTCAAGGTTCAAATTGATTATTCACCTTTCATTGTTAGTGTTAATTTCTATGAATTAATTTAAAACTCGAATCTCACAGGTAAAACTGCAACGTTTTGAAACGCATGGACTATATTGAAGACCAAATATGTAACATTTTGAAACTTAAAAACGATATGGAAACTAAAAAACTAAAACCTAGCAGCCAAAAAGGTGTTTATCCCATAATTTTACAAAGTTGGGTTTCTCGTACTCATCATTAAACATAACATAGGATGATAATGAAACTTTCAAAAGCAGAGACTAAGAAGTACTACAATTGTAATACAACCTAGAGTTTATAGCAGTTTCTTCTGAGTTTAGTACTTCAATTTAGATCAAGTTCATCTTTTAACTGTACTTTGACGATGAATACTCAATAAAGGAAGCTTGTTTTTATCTGGTTTATGCAGTATTACAAATACACATTGGAAACTCCTTATGCTTTGACGGGTACACACAATCTGGCTAAGGCAACGGCAAAAGGGAGCACCGTTGTGTTATTTGTGGCTAGTGCTAATGATAAACAATGGCAGGCTTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTCATCTCTAA

mRNA sequence

ATGGCCTCTGCCTCTGCTTTTACAATTTCCCCATCTTTCCCATTCTCCACCTCCCGCACACCTAAGAACAAACCTATTTCCTCATCCATCTCCTCTCAAAACGCTTCTCAATTCGTGCCCCGGAGGGAGATTTTGAAACGATTCACTCTCCTTCCTCTTTCTTTCCCTCTTTTCCATTCCTTAAATCCACTTCCTTCTCTATCCAAGGAGATCGAAGTTGGCTCTTATCTCCCTCCCTCACCCTCTGACCCTTCTTTTGTCTTCTTCAAAGCTTCCCAAAGTGACACTCCGGCTCTTCGTGCAGGAAATGTGCAACCATACCAGTTCATTCTGCCCCCAACTTGGAAACAAACTCGTGTAGCTAATATTTTATCTGGAAATTACTGTCAACCTAAGTGTGCAGAGCCTTGGGTGGAGGTAAAATTTGAAGATGACAAACAAGGCAAAATCCAGATAGTGGCTTCCCCTTTAATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGCCCAGAGAAGGTAATCGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCTGAGGAACTCCTTGAATCATCAGTTGAGAAACTTGGCGATCAAACGTATTACAAATACACATTGGAAACTCCTTATGCTTTGACGGGTACACACAATCTGGCTAAGGCAACGGCAAAAGGGAGCACCGTTGTGTTATTTGTGGCTAGTGCTAATGATAAACAATGGCAGGCTTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTCATCTCTAA

Coding sequence (CDS)

ATGGCCTCTGCCTCTGCTTTTACAATTTCCCCATCTTTCCCATTCTCCACCTCCCGCACACCTAAGAACAAACCTATTTCCTCATCCATCTCCTCTCAAAACGCTTCTCAATTCGTGCCCCGGAGGGAGATTTTGAAACGATTCACTCTCCTTCCTCTTTCTTTCCCTCTTTTCCATTCCTTAAATCCACTTCCTTCTCTATCCAAGGAGATCGAAGTTGGCTCTTATCTCCCTCCCTCACCCTCTGACCCTTCTTTTGTCTTCTTCAAAGCTTCCCAAAGTGACACTCCGGCTCTTCGTGCAGGAAATGTGCAACCATACCAGTTCATTCTGCCCCCAACTTGGAAACAAACTCGTGTAGCTAATATTTTATCTGGAAATTACTGTCAACCTAAGTGTGCAGAGCCTTGGGTGGAGGTAAAATTTGAAGATGACAAACAAGGCAAAATCCAGATAGTGGCTTCCCCTTTAATACGTCTGACTAATAAGCCTAATGCTACAATTGAAGACATAGGTAGCCCAGAGAAGGTAATCGCTTCTCTTGGCCCTTTTGTTACTGGAAGTACATACGATCCTGAGGAACTCCTTGAATCATCAGTTGAGAAACTTGGCGATCAAACGTATTACAAATACACATTGGAAACTCCTTATGCTTTGACGGGTACACACAATCTGGCTAAGGCAACGGCAAAAGGGAGCACCGTTGTGTTATTTGTGGCTAGTGCTAATGATAAACAATGGCAGGCTTCTGAGAAAGTTTTGAGAACCATGCTTGATTCTTTTCATCTCTAA

Protein sequence

MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFHL*
Homology
[Close]
BLAST of Csa1G088470 vs. Swiss-Prot
Match: PPD6_ARATH (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana GN=PPD6 PE=1 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.1e-95
Identity = 176/265 (66.42%), Postives = 207/265 (78.11%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRRE--ILKRFTLLPLSFPLF 60
           MA+AS    S  F  S   +   K  S  + + +  Q  PRR   +LK    +P    L 
Sbjct: 1   MATASLVPTSKIFSVSPKSSASIKARSRVVVASSQQQQQPRRRELLLKSAVAIPAILQLK 60

Query: 61  HSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQT 120
            +  P+ S ++E+EVGSYLP SPSDPSFV FKA  SDTPALRAGNVQPYQF+LPP WKQ 
Sbjct: 61  EA--PI-SAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVLPPNWKQL 120

Query: 121 RVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVI 180
           R+ANILSGNYCQPKCAEPW+EVKFE++KQGK+Q+VASPLIRLTNKPNATIED+G PEKVI
Sbjct: 121 RIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDLGEPEKVI 180

Query: 181 ASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLF 240
           ASLGPFVTG++YD +ELL++S+EK+GDQTYYKY LETP+ALTG+HNLAKATAKGSTVVLF
Sbjct: 181 ASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAKGSTVVLF 240

Query: 241 VASANDKQWQASEKVLRTMLDSFHL 264
           V SA +KQWQ+S+K L  +LDSF L
Sbjct: 241 VVSATEKQWQSSQKTLEAILDSFQL 262

[Close]
BLAST of Csa1G088470 vs. Swiss-Prot
Match: PPD4_ARATH (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=PPD4 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13
Identity = 47/160 (29.38%), Postives = 79/160 (49.38%), Query Frame = 1 

Query: 106 PYQFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNK-- 165
           PY F +P  W +  V+    G           ++++F   K+G++ ++ +P++R  +   
Sbjct: 115 PYAFSVPQDWNEVPVSIADLGG--------TEIDLRFASPKEGRLSVIVAPVLRFADNLG 174

Query: 166 PNATIEDIGSPEKVIASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTH 225
            +  IE+IG P KVI + GP V G   +  ++L S+V +   + YY++ LE P      H
Sbjct: 175 DDVKIENIGQPAKVINAFGPEVIGENVE-GKVLSSNVAEHDGRLYYQFELEPP------H 234

Query: 226 NLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFHL 264
            L  ATA G+ + LF  + N  QW+   K L+ +  SF +
Sbjct: 235 VLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRI 259

[Close]
BLAST of Csa1G088470 vs. TrEMBL
Match: A0A0A0LVB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088470 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 1.8e-146
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60
           MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS
Sbjct: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFHL 264
           SANDKQWQASEKVLRTMLDSFHL
Sbjct: 241 SANDKQWQASEKVLRTMLDSFHL 263

[Close]
BLAST of Csa1G088470 vs. TrEMBL
Match: A0A067JU83_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20139 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 9.3e-103
Identity = 195/269 (72.49%), Postives = 224/269 (83.27%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISS-----QNASQFVPRREILKRFTLLPLSF 60
           MA+AS   +SP F  STS+ PK+   +S+ ++     QN +    RR+ILK   L P   
Sbjct: 1   MATASVTPVSPVF--STSKAPKSHLKASTTTTTTLWNQNRNHLTLRRQILKGIALSP--- 60

Query: 61  PLFHSLNPLP-SLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPT 120
             F  +   P S ++E+EVGSYLP SPSDPSFV FKA+  DTPALRAGNVQPYQFILPPT
Sbjct: 61  --FVLIKETPISEAREVEVGSYLPTSPSDPSFVLFKATPKDTPALRAGNVQPYQFILPPT 120

Query: 121 WKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSP 180
           WKQ RVANILSGNYCQPKCAEPWVEVKFED+KQGK+Q+VASPLIRLTNKPNA+IEDIGSP
Sbjct: 121 WKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEDIGSP 180

Query: 181 EKVIASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGST 240
           EK+IASLGPFVTG++YDP+ELLE+S+EKLGDQTYYKY LETPYALTGTHNLAKATAKGST
Sbjct: 181 EKLIASLGPFVTGNSYDPDELLETSIEKLGDQTYYKYVLETPYALTGTHNLAKATAKGST 240

Query: 241 VVLFVASANDKQWQASEKVLRTMLDSFHL 264
           VVLFVASANDKQWQASE+ L+T+LDSF +
Sbjct: 241 VVLFVASANDKQWQASERTLKTILDSFQV 262

[Close]
BLAST of Csa1G088470 vs. TrEMBL
Match: W9QS52_9ROSA (PsbP domain-containing protein 6 OS=Morus notabilis GN=L484_002098 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102
Identity = 191/253 (75.49%), Postives = 214/253 (84.58%), Query Frame = 1 

Query: 16  STSRTPKNKPISSSI-----SSQNASQFVPRREILKRFTLLPLSFPLFHSLNPLPSLSKE 75
           STS+ P+N  +S        +S+   Q   RR+ L+   LLPL   L     P  S++KE
Sbjct: 18  STSKPPQNLSLSPPFRAQFPNSRTQQQTTLRRDFLRGVALLPLLLDL---KMPSSSVAKE 77

Query: 76  IEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQ 135
           IEVGSYLPPSPSDPSFV FKAS  DTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQ
Sbjct: 78  IEVGSYLPPSPSDPSFVLFKASPKDTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQ 137

Query: 136 PKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTY 195
           PKCAEPW+EVKFED+KQGKIQ+VASPLIRLTNKPNATIEDIGSPEK+IASLGPFVTG+TY
Sbjct: 138 PKCAEPWIEVKFEDEKQGKIQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPFVTGNTY 197

Query: 196 DPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQAS 255
           DP+ELL+SS+EK GDQTYYKY LETP+ALTG+HNLAKATAKG+TVVLFVASANDKQW AS
Sbjct: 198 DPDELLQSSLEKRGDQTYYKYELETPFALTGSHNLAKATAKGNTVVLFVASANDKQWPAS 257

Query: 256 EKVLRTMLDSFHL 264
           EK+L+ MLDSF +
Sbjct: 258 EKILKAMLDSFQV 267

[Close]
BLAST of Csa1G088470 vs. TrEMBL
Match: A0A0S3RXD4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G258300 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 4.6e-102
Identity = 188/259 (72.59%), Postives = 214/259 (82.63%), Query Frame = 1 

Query: 5   SAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHSLNPL 64
           S F ++ S P S+ +        +S S   + +  PRRE LK   L+PL  PL     P 
Sbjct: 8   SLFPLTLSSPSSSFKLSTLHAFRASTSEYVSFRHTPRREFLKGLALMPL--PLVVLREPP 67

Query: 65  PSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRVANIL 124
           PS ++E+EVGS+LPPSPSDPSFV F AS  DTPALRAGNVQPY+F+LPPTWKQ RVANIL
Sbjct: 68  PSHAREVEVGSFLPPSPSDPSFVLFTASPKDTPALRAGNVQPYKFLLPPTWKQARVANIL 127

Query: 125 SGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIASLGPF 184
           SGNYCQPKCAEPWVEVKFED+KQGK+Q+VASPLIRLTNKPNATIEDIGSPEK+IASLGPF
Sbjct: 128 SGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPF 187

Query: 185 VTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVASAND 244
           VTG+T DPEEL+E+SVEKLGDQTYYKY LETPYALTGTHNLAKATAKG+TVVLFV SAND
Sbjct: 188 VTGNTLDPEELIETSVEKLGDQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVVSAND 247

Query: 245 KQWQASEKVLRTMLDSFHL 264
           KQWQ SE+ L+T+LDSF +
Sbjct: 248 KQWQTSEETLKTVLDSFQV 264

[Close]
BLAST of Csa1G088470 vs. TrEMBL
Match: A0A0F7CYM4_9ROSI (Photosystem II reaction center PsbP family protein OS=Pelargonium incrassatum GN=PPD6 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 6.1e-102
Identity = 193/262 (73.66%), Postives = 217/262 (82.82%), Query Frame = 1 

Query: 3   SASAFTISPSFPFSTSRTPKNKPISSSISSQNASQF-VPRREILKRFTLLPLSFPLFHSL 62
           S+S+   S S    +S  PKN  I +S S    S   + RRE+LK   L PLS  L    
Sbjct: 7   SSSSPMCSSSSSTRSSSCPKNTRIKASYSDPALSPLSLRRRELLKGLALSPLSLTLEA-- 66

Query: 63  NPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRVA 122
            P  +L++EIEVGS+LPPSPSDP FV FKAS  DTPALRAGNVQPYQFILPPTWKQTRVA
Sbjct: 67  -PPHALAREIEVGSFLPPSPSDPKFVIFKASTKDTPALRAGNVQPYQFILPPTWKQTRVA 126

Query: 123 NILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIASL 182
           NILSGNYCQPKCAEPWVEVKFED+KQGK+Q+VASPLIRLTNKPNA IEDIGSPEK+IASL
Sbjct: 127 NILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNALIEDIGSPEKLIASL 186

Query: 183 GPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVAS 242
           GPFVTG+TYDP+ELLESSVEK+GDQTYYKY LETP+ALTG+HNLAKATAKG++VVLFV S
Sbjct: 187 GPFVTGNTYDPDELLESSVEKIGDQTYYKYVLETPFALTGSHNLAKATAKGNSVVLFVVS 246

Query: 243 ANDKQWQASEKVLRTMLDSFHL 264
           ANDKQWQ+SEK L+ MLDSF +
Sbjct: 247 ANDKQWQSSEKTLKAMLDSFRV 265

[Close]
BLAST of Csa1G088470 vs. TAIR10
Match: AT3G56650.1 (AT3G56650.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-96
Identity = 176/265 (66.42%), Postives = 207/265 (78.11%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRRE--ILKRFTLLPLSFPLF 60
           MA+AS    S  F  S   +   K  S  + + +  Q  PRR   +LK    +P    L 
Sbjct: 1   MATASLVPTSKIFSVSPKSSASIKARSRVVVASSQQQQQPRRRELLLKSAVAIPAILQLK 60

Query: 61  HSLNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQT 120
            +  P+ S ++E+EVGSYLP SPSDPSFV FKA  SDTPALRAGNVQPYQF+LPP WKQ 
Sbjct: 61  EA--PI-SAAREVEVGSYLPLSPSDPSFVLFKAKPSDTPALRAGNVQPYQFVLPPNWKQL 120

Query: 121 RVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVI 180
           R+ANILSGNYCQPKCAEPW+EVKFE++KQGK+Q+VASPLIRLTNKPNATIED+G PEKVI
Sbjct: 121 RIANILSGNYCQPKCAEPWIEVKFENEKQGKVQVVASPLIRLTNKPNATIEDLGEPEKVI 180

Query: 181 ASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLF 240
           ASLGPFVTG++YD +ELL++S+EK+GDQTYYKY LETP+ALTG+HNLAKATAKGSTVVLF
Sbjct: 181 ASLGPFVTGNSYDSDELLKTSIEKIGDQTYYKYVLETPFALTGSHNLAKATAKGSTVVLF 240

Query: 241 VASANDKQWQASEKVLRTMLDSFHL 264
           V SA +KQWQ+S+K L  +LDSF L
Sbjct: 241 VVSATEKQWQSSQKTLEAILDSFQL 262

[Close]
BLAST of Csa1G088470 vs. TAIR10
Match: AT1G77090.1 (AT1G77090.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-14
Identity = 47/160 (29.38%), Postives = 79/160 (49.38%), Query Frame = 1 

Query: 106 PYQFILPPTWKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNK-- 165
           PY F +P  W +  V+    G           ++++F   K+G++ ++ +P++R  +   
Sbjct: 115 PYAFSVPQDWNEVPVSIADLGG--------TEIDLRFASPKEGRLSVIVAPVLRFADNLG 174

Query: 166 PNATIEDIGSPEKVIASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTH 225
            +  IE+IG P KVI + GP V G   +  ++L S+V +   + YY++ LE P      H
Sbjct: 175 DDVKIENIGQPAKVINAFGPEVIGENVE-GKVLSSNVAEHDGRLYYQFELEPP------H 234

Query: 226 NLAKATAKGSTVVLFVASANDKQWQASEKVLRTMLDSFHL 264
            L  ATA G+ + LF  + N  QW+   K L+ +  SF +
Sbjct: 235 VLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRI 259

[Close]
BLAST of Csa1G088470 vs. NCBI nr
Match: gi|449459072|ref|XP_004147270.1| (PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis sativus])

HSP 1 Score: 526.6 bits (1355), Expect = 2.6e-146
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60
           MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS
Sbjct: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFHL 264
           SANDKQWQASEKVLRTMLDSFHL
Sbjct: 241 SANDKQWQASEKVLRTMLDSFHL 263

[Close]
BLAST of Csa1G088470 vs. NCBI nr
Match: gi|659072126|ref|XP_008463519.1| (PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 3.4e-138
Identity = 250/263 (95.06%), Postives = 252/263 (95.82%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 60
           MAS SAFTISPSFPFSTS  PK KPISSSI SQ  SQFVPRREILK FTLLPLSFPLF S
Sbjct: 1   MASVSAFTISPSFPFSTSHKPKKKPISSSIFSQKGSQFVPRREILKGFTLLPLSFPLFQS 60

Query: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 120
           LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKAS SDTPALRAGNVQPYQFILPPTWKQTRV
Sbjct: 61  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASPSDTPALRAGNVQPYQFILPPTWKQTRV 120

Query: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 180
           ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQ+VASPLIRLTNKPNATIEDIGSPEKVIAS
Sbjct: 121 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIAS 180

Query: 181 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240
           LGPFVTGSTYDP+ELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA
Sbjct: 181 LGPFVTGSTYDPDELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 240

Query: 241 SANDKQWQASEKVLRTMLDSFHL 264
           SANDKQWQASEKVLRTMLDSF L
Sbjct: 241 SANDKQWQASEKVLRTMLDSFRL 263

[Close]
BLAST of Csa1G088470 vs. NCBI nr
Match: gi|951071291|ref|XP_014491153.1| (PREDICTED: psbP domain-containing protein 6, chloroplastic [Vigna radiata var. radiata])

HSP 1 Score: 385.6 bits (989), Expect = 7.1e-104
Identity = 192/263 (73.00%), Postives = 219/263 (83.27%), Query Frame = 1 

Query: 5   SAFTISPSFPFSTSRTPKN----KPISSSISSQNASQFVPRREILKRFTLLPLSFPLFHS 64
           S F ++ S P S+S +           +S S   +SQ++PRRE LK   L+PL  PL   
Sbjct: 8   SLFPLTLSSPSSSSSSSSKLWTLHAFRASTSEYVSSQYIPRREFLKGLALMPL--PLVVL 67

Query: 65  LNPLPSLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRV 124
             P PS ++E+EVGS+LPPSPSDPSFV F AS  DTPALRAGNVQPY+F+LPPTWKQ RV
Sbjct: 68  REPPPSHAREVEVGSFLPPSPSDPSFVLFTASPKDTPALRAGNVQPYKFLLPPTWKQARV 127

Query: 125 ANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIAS 184
           ANILSGNYCQPKCAEPWVEVKFED+KQGK+Q+VASPLIRLTNKPNATIEDIGSPEK+IAS
Sbjct: 128 ANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKLIAS 187

Query: 185 LGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVA 244
           LGPFVTG+T+DPEELLE+SVEKLGDQTYYKY LETPYALTGTHNLAKATAKG+TVVLFV 
Sbjct: 188 LGPFVTGNTFDPEELLETSVEKLGDQTYYKYVLETPYALTGTHNLAKATAKGNTVVLFVV 247

Query: 245 SANDKQWQASEKVLRTMLDSFHL 264
           SANDKQWQ SE+ L+T+LDSF +
Sbjct: 248 SANDKQWQTSEETLKTVLDSFQV 268

[Close]
BLAST of Csa1G088470 vs. NCBI nr
Match: gi|802708495|ref|XP_012084507.1| (PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas])

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-102
Identity = 195/269 (72.49%), Postives = 224/269 (83.27%), Query Frame = 1 

Query: 1   MASASAFTISPSFPFSTSRTPKNKPISSSISS-----QNASQFVPRREILKRFTLLPLSF 60
           MA+AS   +SP F  STS+ PK+   +S+ ++     QN +    RR+ILK   L P   
Sbjct: 1   MATASVTPVSPVF--STSKAPKSHLKASTTTTTTLWNQNRNHLTLRRQILKGIALSP--- 60

Query: 61  PLFHSLNPLP-SLSKEIEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPT 120
             F  +   P S ++E+EVGSYLP SPSDPSFV FKA+  DTPALRAGNVQPYQFILPPT
Sbjct: 61  --FVLIKETPISEAREVEVGSYLPTSPSDPSFVLFKATPKDTPALRAGNVQPYQFILPPT 120

Query: 121 WKQTRVANILSGNYCQPKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSP 180
           WKQ RVANILSGNYCQPKCAEPWVEVKFED+KQGK+Q+VASPLIRLTNKPNA+IEDIGSP
Sbjct: 121 WKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNASIEDIGSP 180

Query: 181 EKVIASLGPFVTGSTYDPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGST 240
           EK+IASLGPFVTG++YDP+ELLE+S+EKLGDQTYYKY LETPYALTGTHNLAKATAKGST
Sbjct: 181 EKLIASLGPFVTGNSYDPDELLETSIEKLGDQTYYKYVLETPYALTGTHNLAKATAKGST 240

Query: 241 VVLFVASANDKQWQASEKVLRTMLDSFHL 264
           VVLFVASANDKQWQASE+ L+T+LDSF +
Sbjct: 241 VVLFVASANDKQWQASERTLKTILDSFQV 262

[Close]
BLAST of Csa1G088470 vs. NCBI nr
Match: gi|703085610|ref|XP_010092785.1| (PsbP domain-containing protein 6 [Morus notabilis])

HSP 1 Score: 380.6 bits (976), Expect = 2.3e-102
Identity = 191/253 (75.49%), Postives = 214/253 (84.58%), Query Frame = 1 

Query: 16  STSRTPKNKPISSSI-----SSQNASQFVPRREILKRFTLLPLSFPLFHSLNPLPSLSKE 75
           STS+ P+N  +S        +S+   Q   RR+ L+   LLPL   L     P  S++KE
Sbjct: 18  STSKPPQNLSLSPPFRAQFPNSRTQQQTTLRRDFLRGVALLPLLLDL---KMPSSSVAKE 77

Query: 76  IEVGSYLPPSPSDPSFVFFKASQSDTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQ 135
           IEVGSYLPPSPSDPSFV FKAS  DTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQ
Sbjct: 78  IEVGSYLPPSPSDPSFVLFKASPKDTPALRAGNVQPYQFILPPTWKQTRVANILSGNYCQ 137

Query: 136 PKCAEPWVEVKFEDDKQGKIQIVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGSTY 195
           PKCAEPW+EVKFED+KQGKIQ+VASPLIRLTNKPNATIEDIGSPEK+IASLGPFVTG+TY
Sbjct: 138 PKCAEPWIEVKFEDEKQGKIQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPFVTGNTY 197

Query: 196 DPEELLESSVEKLGDQTYYKYTLETPYALTGTHNLAKATAKGSTVVLFVASANDKQWQAS 255
           DP+ELL+SS+EK GDQTYYKY LETP+ALTG+HNLAKATAKG+TVVLFVASANDKQW AS
Sbjct: 198 DPDELLQSSLEKRGDQTYYKYELETPFALTGSHNLAKATAKGNTVVLFVASANDKQWPAS 257

Query: 256 EKVLRTMLDSFHL 264
           EK+L+ MLDSF +
Sbjct: 258 EKILKAMLDSFQV 267

The following BLAST results are available for this feature:
BLAST of Csa1G088470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPD6_ARATH2.1e-9566.42PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana GN=PPD6 ... [more]
PPD4_ARATH3.4e-1329.38PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=PPD4 ... [more]
BLAST of Csa1G088470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVB3_CUCSA1.8e-146100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088470 PE=4 SV=1[more]
A0A067JU83_JATCU9.3e-10372.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20139 PE=4 SV=1[more]
W9QS52_9ROSA1.6e-10275.49PsbP domain-containing protein 6 OS=Morus notabilis GN=L484_002098 PE=4 SV=1[more]
A0A0S3RXD4_PHAAN4.6e-10272.59Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G258300 PE=... [more]
A0A0F7CYM4_9ROSI6.1e-10273.66Photosystem II reaction center PsbP family protein OS=Pelargonium incrassatum GN... [more]
BLAST of Csa1G088470 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56650.11.2e-9666.42 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family pr... [more]
AT1G77090.11.9e-1429.38 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family pr... [more]
BLAST of Csa1G088470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459072|ref|XP_004147270.1|2.6e-146100.00PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis sativus][more]
gi|659072126|ref|XP_008463519.1|3.4e-13895.06PREDICTED: psbP domain-containing protein 6, chloroplastic [Cucumis melo][more]
gi|951071291|ref|XP_014491153.1|7.1e-10473.00PREDICTED: psbP domain-containing protein 6, chloroplastic [Vigna radiata var. r... [more]
gi|802708495|ref|XP_012084507.1|1.3e-10272.49PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas][more]
gi|703085610|ref|XP_010092785.1|2.3e-10275.49PsbP domain-containing protein 6 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP
IPR016123Mog1/PsbP_a/b/a-sand
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0015979 photosynthesis
biological_process GO:0010027 thylakoid membrane organization
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009523 photosystem II
molecular_function GO:0005509 calcium ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU130325cucumber EST collection version 3.0transcribed_cluster
CU170452cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G088470.1Csa1G088470.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU130325CU130325transcribed_cluster
CU170452CU170452transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP familyPFAMPF01789PsbPcoord: 106..262
score: 6.8
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3DG3DSA:3.40.1000.10coord: 94..263
score: 2.2
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichunknownSSF55724Mog1p/PsbP-likecoord: 102..262
score: 3.3
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 73..263
score: 1.2E-118coord: 1..52
score: 1.2E
NoneNo IPR availablePANTHERPTHR31407:SF14PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTICcoord: 1..52
score: 1.2E-118coord: 73..263
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G088470Cla005055Watermelon (97103) v1cuwmB010
Csa1G088470MELO3C005006Melon (DHL92) v3.5.1cumeB015
Csa1G088470ClCG03G002390Watermelon (Charleston Gray)cuwcgB037
Csa1G088470Lsi02G014440Bottle gourd (USVL1VR-Ls)culsiB024
Csa1G088470MELO3C005006.2Melon (DHL92) v3.6.1cumedB010
Csa1G088470Cla97C03G053420Watermelon (97103) v2cuwmbB034
Csa1G088470Bhi08G000251Wax gourdcuwgoB049
Csa1G088470CSPI01G12900Wild cucumber (PI 183967)cpicuB000
Csa1G088470Cucsa.207420Cucumber (Gy14) v1cgycuB314
Csa1G088470CmaCh01G005320Cucurbita maxima (Rimu)cmacuB431
Csa1G088470CmaCh13G001970Cucurbita maxima (Rimu)cmacuB203
Csa1G088470CmoCh13G001990Cucurbita moschata (Rifu)cmocuB188
Csa1G088470CmoCh01G005620Cucurbita moschata (Rifu)cmocuB421
Csa1G088470Cp4.1LG02g12870Cucurbita pepo (Zucchini)cpecuB528
Csa1G088470CsGy1G012980Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G088470Wax gourdcuwgoB019
Csa1G088470Cucumber (Chinese Long) v2cucuB041
Csa1G088470Cucurbita maxima (Rimu)cmacuB581
Csa1G088470Cucurbita moschata (Rifu)cmocuB570
Csa1G088470Melon (DHL92) v3.5.1cumeB012
Csa1G088470Watermelon (Charleston Gray)cuwcgB033
Csa1G088470Watermelon (97103) v1cuwmB070
Csa1G088470Cucurbita pepo (Zucchini)cpecuB516
Csa1G088470Bottle gourd (USVL1VR-Ls)culsiB002
Csa1G088470Melon (DHL92) v3.6.1cumedB008
Csa1G088470Silver-seed gourdcarcuB0472
Csa1G088470Watermelon (97103) v2cuwmbB028