MELO3C004701.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C004701.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionF-box protein At1g67340
Locationchr12 : 12129901 .. 12130208 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGTTGTTGAGCGATTTTGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGTGTCGCCCGGGAATGGGCTTAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGTGCGTGTCAGGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCAATGACAATGGTGACGGTGGGGACGATGTAG

mRNA sequence

ATGTCCGTTGTTGAGCGATTTTGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGTGTCGCCCGGGAATGGGCTTAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGTGCGTGTCAGGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCAATGACAATGGTGACGGTGGGGACGATGTAG

Coding sequence (CDS)

TGTCCGTTGTTGAGCGATTTTGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGTGTCGCCCGGGAATGGGCTTAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGTGCGTGTCAGGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCAATGACAATGGTGACGGTGGGGACGATGTA

Protein sequence

CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDDV
Homology
[Close]
BLAST of MELO3C004701.2 vs. NCBI nr
Match: XP_004135325.1 (PREDICTED: F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical protein Csa_5G589890 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 2.7e-55
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 273 CPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCS 332

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDDV 103
           VCGAVNYCSRACQALDWKLRHK+DCAPVERWL+DNGDG DDV
Sbjct: 333 VCGAVNYCSRACQALDWKLRHKIDCAPVERWLDDNGDGMDDV 374

[Close]
BLAST of MELO3C004701.2 vs. NCBI nr
Match: XP_008446037.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 4.6e-55
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 273 CPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCS 332

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDDV 103
           VCGAVNYCSRACQALDWKLRHKMDCAPVERWL+DNGD  DDV
Sbjct: 333 VCGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDVADDV 374

[Close]
BLAST of MELO3C004701.2 vs. NCBI nr
Match: XP_022998094.1 (F-box protein At1g67340 [Cucurbita maxima])

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-53
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPEAHPASQFLAEWF ARG SPG+GLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 273 CPLLSDFGCNIPAPEAHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCS 332

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD 102
           VCGAVNYCSRACQALDWKLRHKMDC PVERWL+DNGDGG D
Sbjct: 333 VCGAVNYCSRACQALDWKLRHKMDCVPVERWLDDNGDGGAD 373

[Close]
BLAST of MELO3C004701.2 vs. NCBI nr
Match: XP_023516587.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-53
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPEAHPASQFLAEWF ARG SPG+GLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 295 CPLLSDFGCNIPAPEAHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCS 354

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD 102
           VCGAVNYCSRACQALDWKLRHKMDC PVERWL+DNGDGG D
Sbjct: 355 VCGAVNYCSRACQALDWKLRHKMDCVPVERWLDDNGDGGAD 395

[Close]
BLAST of MELO3C004701.2 vs. NCBI nr
Match: XP_022957417.1 (F-box protein At1g67340 [Cucurbita moschata])

HSP 1 Score: 216.5 bits (550), Expect = 4.3e-53
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPE HPASQFLAEWF ARG SPG+GLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 275 CPLLSDFGCNIPAPEVHPASQFLAEWFAARGGSPGDGLRLCSHVGCGRPETRRHEFRRCS 334

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD 102
           VCGAVNYCSRACQALDWKLRHKMDC PVERWL+DNGDGG D
Sbjct: 335 VCGAVNYCSRACQALDWKLRHKMDCVPVERWLDDNGDGGAD 375

[Close]
BLAST of MELO3C004701.2 vs. TAIR10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 191.4 bits (485), Expect = 2.7e-49
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVS-PGNGLRLCSHVGCGRPETRRHEFRRC 60
           CPLLSDFGCN+PAPE HPA++FLA+WF  RG   PG+GLRLCSH GCGRPETR+HEFRRC
Sbjct: 261 CPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRC 320

Query: 61  SVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD 101
           SVCG VNYCSRACQALDWKLRHKMDCAPV+RWL + GDGG+
Sbjct: 321 SVCGVVNYCSRACQALDWKLRHKMDCAPVQRWL-EEGDGGE 360

[Close]
BLAST of MELO3C004701.2 vs. TAIR10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger)

HSP 1 Score: 134.4 bits (337), Expect = 3.9e-32
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0 

Query: 11  IPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSR 70
           +P  E HP ++FL EWF +  V    GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR
Sbjct: 231 VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSR 290

Query: 71  ACQALDWKLRHKMDCAPVERWLNDNGDGGDD 102
            CQALDW+ +HK++C P++ W+    + GDD
Sbjct: 291 GCQALDWRAKHKVECTPLDLWVAAAAEIGDD 321

[Close]
BLAST of MELO3C004701.2 vs. TAIR10
Match: AT1G17110.2 (ubiquitin-specific protease 15)

HSP 1 Score: 47.4 bits (111), Expect = 6.2e-06
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0 

Query: 58  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 90
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]
BLAST of MELO3C004701.2 vs. TAIR10
Match: AT2G24640.1 (ubiquitin-specific protease 19)

HSP 1 Score: 45.8 bits (107), Expect = 1.8e-05
Identity = 19/40 (47.50%), Postives = 24/40 (60.00%), Query Frame = 0 

Query: 46  CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC 86
           CG+  T     ++CS C +V YCS ACQ  DWK  HK+ C
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKC 101

[Close]
BLAST of MELO3C004701.2 vs. TAIR10
Match: AT4G02220.1 (zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein)

HSP 1 Score: 45.1 bits (105), Expect = 3.1e-05
Identity = 28/93 (30.11%), Postives = 42/93 (45.16%), Query Frame = 0 

Query: 7   FGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVN 66
           F C +  P A+P     A   +      G+G  LC+  G  + +      + CS C    
Sbjct: 156 FRCQL--PRANPFYSSEAPKHDGTDKPLGHGAPLCTWCGTWKGD------KLCSGCKNAR 215

Query: 67  YCSRACQALDWKLRHKMDCAPVERWLNDNGDGG 100
           YCS   QAL W+L HK +C  + R +++  D G
Sbjct: 216 YCSPKHQALHWRLGHKTECQQL-RTVSETSDSG 239

[Close]
BLAST of MELO3C004701.2 vs. Swiss-Prot
Match: sp|Q9FYF9|FB76_ARATH (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.8e-48
Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVS-PGNGLRLCSHVGCGRPETRRHEFRRC 60
           CPLLSDFGCN+PAPE HPA++FLA+WF  RG   PG+GLRLCSH GCGRPETR+HEFRRC
Sbjct: 261 CPLLSDFGCNVPAPETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRC 320

Query: 61  SVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD 101
           SVCG VNYCSRACQALDWKLRHKMDCAPV+RWL + GDGG+
Sbjct: 321 SVCGVVNYCSRACQALDWKLRHKMDCAPVQRWL-EEGDGGE 360

[Close]
BLAST of MELO3C004701.2 vs. Swiss-Prot
Match: sp|Q9FK27|FB342_ARATH (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.0e-31
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0 

Query: 11  IPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSR 70
           +P  E HP ++FL EWF +  V    GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR
Sbjct: 231 VPVQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSR 290

Query: 71  ACQALDWKLRHKMDCAPVERWLNDNGDGGDD 102
            CQALDW+ +HK++C P++ W+    + GDD
Sbjct: 291 GCQALDWRAKHKVECTPLDLWVAAAAEIGDD 321

[Close]
BLAST of MELO3C004701.2 vs. Swiss-Prot
Match: sp|Q2YDC9|PDCD2_BOVIN (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-05
Identity = 22/54 (40.74%), Postives = 29/54 (53.70%), Query Frame = 0 

Query: 36  NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 90
           +G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  +
Sbjct: 130 SGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]
BLAST of MELO3C004701.2 vs. Swiss-Prot
Match: sp|Q9FPS9|UBP15_ARATH (Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 0 

Query: 58  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 90
           RCS C +V YCS  CQ + W++ HK +C PVE
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]
BLAST of MELO3C004701.2 vs. Swiss-Prot
Match: sp|Q09415|SET14_CAEEL (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-04
Identity = 18/44 (40.91%), Postives = 27/44 (61.36%), Query Frame = 0 

Query: 46 CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE 90
          C +  T   E ++CS C  + YCS+ CQ  DWKL HK++C  ++
Sbjct: 26 CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIK 68

[Close]
BLAST of MELO3C004701.2 vs. TrEMBL
Match: tr|A0A0A0KTC5|A0A0A0KTC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-55
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 273 CPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCS 332

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDDV 103
           VCGAVNYCSRACQALDWKLRHK+DCAPVERWL+DNGDG DDV
Sbjct: 333 VCGAVNYCSRACQALDWKLRHKIDCAPVERWLDDNGDGMDDV 374

[Close]
BLAST of MELO3C004701.2 vs. TrEMBL
Match: tr|A0A1S3BE37|A0A1S3BE37_CUCME (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-55
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 273 CPLLSDFGCNIPAPEAHPASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCS 332

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDDV 103
           VCGAVNYCSRACQALDWKLRHKMDCAPVERWL+DNGD  DDV
Sbjct: 333 VCGAVNYCSRACQALDWKLRHKMDCAPVERWLDDNGDVADDV 374

[Close]
BLAST of MELO3C004701.2 vs. TrEMBL
Match: tr|A0A2P5BPE9|A0A2P5BPE9_PARAD (Eukaryotic elongation factor 2 kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_221980 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-50
Identity = 87/98 (88.78%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCN+PAPEAHPAS+F+AEWF ARG SPGNGLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 283 CPLLSDFGCNVPAPEAHPASRFMAEWFAARGGSPGNGLRLCSHVGCGRPETRRHEFRRCS 342

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDG 99
           VCGAVNYCSRACQALDWKLRHK++C PVERWL+++GDG
Sbjct: 343 VCGAVNYCSRACQALDWKLRHKVECTPVERWLDEDGDG 380

[Close]
BLAST of MELO3C004701.2 vs. TrEMBL
Match: tr|A0A2P5EBD3|A0A2P5EBD3_9ROSA (Eukaryotic elongation factor 2 kinase OS=Trema orientalis OX=63057 GN=TorRG33x02_214350 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.8e-50
Identity = 87/98 (88.78%), Postives = 94/98 (95.92%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCN+PAPEAHPAS+F+AEWF ARG  PGNGLRLCSHVGCGRPETRRHEFRRCS
Sbjct: 288 CPLLSDFGCNVPAPEAHPASRFMAEWFAARGGWPGNGLRLCSHVGCGRPETRRHEFRRCS 347

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDG 99
           VCGAVNYCSRACQALDWKLRHK++CAPVERWL++ GDG
Sbjct: 348 VCGAVNYCSRACQALDWKLRHKVECAPVERWLDEGGDG 385

[Close]
BLAST of MELO3C004701.2 vs. TrEMBL
Match: tr|A0A061E5E1|A0A061E5E1_THECC (HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao OX=3641 GN=TCM_008826 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-50
Identity = 87/100 (87.00%), Postives = 94/100 (94.00%), Query Frame = 0 

Query: 1   CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCS 60
           CPLLSDFGCN+PAPEAHPAS+FLAEWF ARG  PG GLRLCSHVGCGRPETR+HEFRRCS
Sbjct: 272 CPLLSDFGCNVPAPEAHPASRFLAEWFSARGGMPGPGLRLCSHVGCGRPETRKHEFRRCS 331

Query: 61  VCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD 101
           VCGAVNYCSRACQALDWKLRHK +CAPVERWL++ GDGG+
Sbjct: 332 VCGAVNYCSRACQALDWKLRHKAECAPVERWLDEEGDGGE 371

The following BLAST results are available for this feature:
BLAST of MELO3C004701.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135325.12.7e-5596.08PREDICTED: F-box protein At1g67340 [Cucumis sativus] >KGN51672.1 hypothetical pr... [more]
XP_008446037.14.6e-5596.08PREDICTED: F-box protein At1g67340 [Cucumis melo][more]
XP_022998094.11.5e-5394.06F-box protein At1g67340 [Cucurbita maxima][more]
XP_023516587.11.5e-5394.06F-box protein At1g67340-like [Cucurbita pepo subsp. pepo][more]
XP_022957417.14.3e-5393.07F-box protein At1g67340 [Cucurbita moschata][more]
BLAST of MELO3C004701.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67340.12.7e-4981.19HCP-like superfamily protein with MYND-type zinc finger[more]
AT5G50450.13.9e-3259.34HCP-like superfamily protein with MYND-type zinc finger[more]
AT1G17110.26.2e-0653.13ubiquitin-specific protease 15[more]
AT2G24640.11.8e-0547.50ubiquitin-specific protease 19[more]
AT4G02220.13.1e-0530.11zinc finger (MYND type) family protein / programmed cell death 2 C-terminal doma... [more]
BLAST of MELO3C004701.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FYF9|FB76_ARATH4.8e-4881.19F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1[more]
sp|Q9FK27|FB342_ARATH7.0e-3159.34F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1[more]
sp|Q2YDC9|PDCD2_BOVIN2.3e-0540.74Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1[more]
sp|Q9FPS9|UBP15_ARATH1.1e-0453.13Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP1... [more]
sp|Q09415|SET14_CAEEL2.5e-0440.91SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=... [more]
BLAST of MELO3C004701.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KTC5|A0A0A0KTC5_CUCSA1.8e-5596.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589890 PE=4 SV=1[more]
tr|A0A1S3BE37|A0A1S3BE37_CUCME3.0e-5596.08F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103488887 PE=4 SV=1[more]
tr|A0A2P5BPE9|A0A2P5BPE9_PARAD1.3e-5088.78Eukaryotic elongation factor 2 kinase OS=Parasponia andersonii OX=3476 GN=PanWU0... [more]
tr|A0A2P5EBD3|A0A2P5EBD3_9ROSA3.8e-5088.78Eukaryotic elongation factor 2 kinase OS=Trema orientalis OX=63057 GN=TorRG33x02... [more]
tr|A0A061E5E1|A0A061E5E1_THECC5.0e-5087.00HCP-like superfamily protein with MYND-type zinc finger OS=Theobroma cacao OX=36... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004701.2.1MELO3C004701.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.60.180coord: 35..89
e-value: 1.6E-11
score: 45.8
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 1..101
NoneNo IPR availablePANTHERPTHR12298:SF37SUBFAMILY NOT NAMEDcoord: 1..101
NoneNo IPR availableSUPERFAMILYSSF144232HIT/MYND zinc finger-likecoord: 39..90
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 46..85
e-value: 8.0E-9
score: 35.3
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 43..85
score: 10.859

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004701.2Wax gourdmedwgoB176
MELO3C004701.2Cucumber (Gy14) v2cgybmedB009
MELO3C004701.2Cucumber (Gy14) v1cgymedB528
MELO3C004701.2Cucurbita maxima (Rimu)cmamedB425
MELO3C004701.2Cucurbita moschata (Rifu)cmomedB400
MELO3C004701.2Cucurbita pepo (Zucchini)cpemedB033
MELO3C004701.2Wild cucumber (PI 183967)cpimedB011
MELO3C004701.2Cucumber (Chinese Long) v2cumedB010
MELO3C004701.2Bottle gourd (USVL1VR-Ls)lsimedB255
MELO3C004701.2Watermelon (Charleston Gray)medwcgB133
MELO3C004701.2Watermelon (97103) v1medwmB167
MELO3C004701.2Silver-seed gourdcarmedB0000
MELO3C004701.2Cucumber (Chinese Long) v3cucmedB009
MELO3C004701.2Watermelon (97103) v2medwmbB132