MELO3C004420 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGTGAATATATATTCCATAAGTAGCTTAATTTGGACGAACCCTAGTTTCCGTTTCAAATTTGGGAAATTTCACTCTTTTCCTTTTTGATTCTCCTCATTTCCCGCTGTGAAATACTTCACATCTTCACAAACCTCCCGCCAGTCGTGTCAATTTTAATTGGGCACCCAGTTCTCGGCATCACTTAGCGTGAAGAAATTCTAGTGCACGATTTGATTTGTTTTGCAAACAAGAGATGATGAAAGGAAGAAATTCTGGGAATTTGTCGAACCCATGTTTGACAATGCATCAGCCATGGGCTTCTTTGCTTGTCTACGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCACCGCTTAGAGGTTCGTTCATCTCGAAATCCCACGTTCTTCTTGCAAATCTACTTTTTTGGCGTGAGGCTCTGTTTGATTTGTTTGAATGTTGGAATAAGAAGACAAAATGATAGTAGAATTGAGAAATAGAATTGGGTAATCATGGGTTTGTTGTTACTCTACTGTTTGTCATTTGTTTGATTCTGGATCAGATGCTTGATTGGTTGGGAATAAGCGTTTTTGTTGTCTTTGATTTACGCTATAAAAAGGATTTGAAACCAAGCTAACAAACATTGTTGGACATTGTATGTTTGTAAATGTGTGTCCTATTTTAGTTGTCTTGTTTATTTTTTGTAGTGGTGTATCTTTTGTTAGTTAACCCCTTTCTTTTTGGATATGGTTCATTAAGGATTATTCTAAATTATGAATTTGATATCTGAAGGCCGTCTTTGGATTCATGCTGCAAGTAAGGTTCCTGAGGATTCTACAATCAAAGCAATGGAGGACTTCTATAGGGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCCGTTTCAAGGCTTTTAGGTATTTAATTCGATGGTTTTTCATGATACATTACTTACTGGTTCACGTGTTTTTGTAGGCTCTTTTTTGGCTCTATTTCAATATTCCAGCGTCTGAATTATTTATCTTATTGCTTGGAGTCTATGATTAAAGTGACGCCATCATTATTTTTTACACCTTTGTTCATTCAGGGTGTGTTGAAGTGGTTGGGTGTGTGCGTGGTGAAGAACTGAAAAATTGGGATGAAGTACCTGAAGGGGTGGGTGGCATAGTTTTTCTTATGCAGACCTTAGTTTCTGAGATATCTTAATTCTTTTTTGCTTTTAGAAAAAACAAGCTAACTAAAGTATACCAATTTTATTTGAACGCAGGTTAGAGTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGGTGTGTACTGATTTGAACAGATAATCACATTTCAGCAGAGTAATAGTTTACCAAATGGCATTTTTTTTCCCAGAAATTGCTGATTCCATTCGAGATGCGCGGTTTCCAGGGTGTTTATAACTTAGAAAAGAGGGTAGGAATGTTAATTTTGTTTTGATTCTCTTCTTATTGCTTATTTTGTGTGTTTCCGTATGTTCTAAAGTCAATTGTATTTCGTCAGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTTAAATGCCCACTGCCTGTAAAGTTCCAACTTCCAGATCCTAGAGATCCATTCTCCTTGAAGCCAGGATCTGTATCTTCATGTTCTCCCGAGACTCAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGCGATAGCTGGTGCTCGAGCAGCCGCTACTCAGTTTACAAGAAAGTACCAGGACCCCCAAACTTCATCTAATTTTGGAATGGGAAGTAAATCCAGAACTGAATTCTTGGGAGGAGATCAATTTCAATCATCCAACTTCGGTCAAGACAAGGTTTCACGAGAAAATATCGAAGAACAAACTAGTAGCTACCACACTCGATCTCAGGGACTTTTTGCACACCCGCAGCAGCAAAGTAGAGCTCCTTCCAAGGTATGCGTTTTTTTTTTTAACAACACCTGTTATTATTTTAAATGAAAAGGAGCAGCAGTGAACAAATAAAATGACCATAATTAGCACTTCATTTTCAAAGATGTTACAAATTGTTGTAACTTGGGTTTAGGGGCATAATAGGATTTAAATCATCGATATTCTAATCATACTAATGAAAAGATGATTAATTATTGTGTATTAGTAGATAATCCTTACAGTATGTTCTTAAATATATTGTCAAATGCTATAGCTTGTTACTGAATCTAGACTAGTCTTGAATATTTCATTGCTCTTCCACCTCCAACTTGGGTATCTTCAAAACAGTCTGATGCCTTTCCATTAAACTGAAGAATGTATTGTTGTTCGCAAAATTGTCCGTGTCCTGTATGGCATTGACGTTAATGTTAGAGGAAGCACGTTTCAACATTTTAAGAGTCCTATTAACAGAAGTAATTCCCAATTCGTTCTAAGACAGTTTTGTATTCTTATTTGTGATGCCATTATTGATTGCTACACGTAATTAATGAGCCGTTCGTGTCTTGTTTAGATTTTTGCCGCTGCTGTGAGAGATCTGAGACCGACATGAATGTTGACGAATTCAATTGCTGACAGGATTTGTACATAGAGAAGCAGTGTGTATGTGAAGGGTGTCTTCAGCTGTAACTGGTGTTTAGTTGGTTACGGTTAAAGTTATAAATGGAGGTTTGGGTTGAGAGGAAAGTGAACTATTTTGTGGAATTTCCATGGTAGGAAATTTGGGAGAGTCTAGCCCTTGCTAATTGTGTAAGCTTATCTGTTTATTGGTGATAAATAAACCCTTGTGCAGTTGTAATTTTTGAGAATCCACTCTCAAAAGCTAGATTTTAC AAGTGAATATATATTCCATAAGTAGCTTAATTTGGACGAACCCTAGTTTCCGTTTCAAATTTGGGAAATTTCACTCTTTTCCTTTTTGATTCTCCTCATTTCCCGCTGTGAAATACTTCACATCTTCACAAACCTCCCGCCAGTCGTGTCAATTTTAATTGGGCACCCAGTTCTCGGCATCACTTAGCGTGAAGAAATTCTAGTGCACGATTTGATTTGTTTTGCAAACAAGAGATGATGAAAGGAAGAAATTCTGGGAATTTGTCGAACCCATGTTTGACAATGCATCAGCCATGGGCTTCTTTGCTTGTCTACGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCACCGCTTAGAGGCCGTCTTTGGATTCATGCTGCAAGTAAGGTTCCTGAGGATTCTACAATCAAAGCAATGGAGGACTTCTATAGGGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCCGTTTCAAGGCTTTTAGGGTGTGTTGAAGTGGTTGGGTGTGTGCGTGGTGAAGAACTGAAAAATTGGGATGAAGTACCTGAAGGGGTTAGAGTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGAAATTGCTGATTCCATTCGAGATGCGCGGTTTCCAGGGTGTTTATAACTTAGAAAAGAGGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTTAAATGCCCACTGCCTGTAAAGTTCCAACTTCCAGATCCTAGAGATCCATTCTCCTTGAAGCCAGGATCTGTATCTTCATGTTCTCCCGAGACTCAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGCGATAGCTGGTGCTCGAGCAGCCGCTACTCAGTTTACAAGAAAGTACCAGGACCCCCAAACTTCATCTAATTTTGGAATGGGAAGTAAATCCAGAACTGAATTCTTGGGAGGAGATCAATTTCAATCATCCAACTTCGGTCAAGACAAGGTTTCACGAGAAAATATCGAAGAACAAACTAGTAGCTACCACACTCGATCTCAGGGACTTTTTGCACACCCGCAGCAGCAAAGTAGAGCTCCTTCCAAGATTTTTGCCGCTGCTGTGAGAGATCTGAGACCGACATGAATGTTGACGAATTCAATTGCTGACAGGATTTGTACATAGAGAAGCAGTGTGTATGTGAAGGGTGTCTTCAGCTGTAACTGGTGTTTAGTTGGTTACGGTTAAAGTTATAAATGGAGGTTTGGGTTGAGAGGAAAGTGAACTATTTTGTGGAATTTCCATGGTAGGAAATTTGGGAGAGTCTAGCCCTTGCTAATTGTGTAAGCTTATCTGTTTATTGGTGATAAATAAACCCTTGTGCAGTTGTAATTTTTGAGAATCCACTCTCAAAAGCTAGATTTTAC ATGATGAAAGGAAGAAATTCTGGGAATTTGTCGAACCCATGTTTGACAATGCATCAGCCATGGGCTTCTTTGCTTGTCTACGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCACCGCTTAGAGGCCGTCTTTGGATTCATGCTGCAAGTAAGGTTCCTGAGGATTCTACAATCAAAGCAATGGAGGACTTCTATAGGGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCCGTTTCAAGGCTTTTAGGGTGTGTTGAAGTGGTTGGGTGTGTGCGTGGTGAAGAACTGAAAAATTGGGATGAAGTACCTGAAGGGGTTAGAGTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGAAATTGCTGATTCCATTCGAGATGCGCGGTTTCCAGGGTGTTTATAACTTAGAAAAGAGGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTTAAATGCCCACTGCCTGTAAAGTTCCAACTTCCAGATCCTAGAGATCCATTCTCCTTGAAGCCAGGATCTGTATCTTCATGTTCTCCCGAGACTCAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGCGATAGCTGGTGCTCGAGCAGCCGCTACTCAGTTTACAAGAAAGTACCAGGACCCCCAAACTTCATCTAATTTTGGAATGGGAAGTAAATCCAGAACTGAATTCTTGGGAGGAGATCAATTTCAATCATCCAACTTCGGTCAAGACAAGGTTTCACGAGAAAATATCGAAGAACAAACTAGTAGCTACCACACTCGATCTCAGGGACTTTTTGCACACCCGCAGCAGCAAAGTAGAGCTCCTTCCAAGATTTTTGCCGCTGCTGTGAGAGATCTGAGACCGACATGA MMKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKAMEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDEVPEGVRVEAQTDFCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSLKPGSVSSCSPETQGSGSEVEKSSKLNAAIAGARAAATQFTRKYQDPQTSSNFGMGSKSRTEFLGGDQFQSSNFGQDKVSRENIEEQTSSYHTRSQGLFAHPQQQSRAPSKIFAAAVRDLRPT*
BLAST of MELO3C004420 vs. Swiss-Prot
Match: TRIP4_HUMAN (Activating signal cointegrator 1 OS=Homo sapiens GN=TRIP4 PE=1 SV=4) HSP 1 Score: 123.2 bits (308), Expect = 4.7e-27 Identity = 58/148 (39.19%), Postives = 93/148 (62.84%), Query Frame = 1
BLAST of MELO3C004420 vs. Swiss-Prot
Match: TRIP4_MOUSE (Activating signal cointegrator 1 OS=Mus musculus GN=Trip4 PE=1 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 6.2e-27 Identity = 58/148 (39.19%), Postives = 92/148 (62.16%), Query Frame = 1
BLAST of MELO3C004420 vs. TrEMBL
Match: A0A0A0LFF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009570 PE=4 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 3.5e-162 Identity = 290/336 (86.31%), Postives = 296/336 (88.10%), Query Frame = 1
BLAST of MELO3C004420 vs. TrEMBL
Match: A0A067EY75_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036173mg PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 1.0e-108 Identity = 204/309 (66.02%), Postives = 245/309 (79.29%), Query Frame = 1
BLAST of MELO3C004420 vs. TrEMBL
Match: V4T3B6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001967mg PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 1.0e-108 Identity = 204/309 (66.02%), Postives = 245/309 (79.29%), Query Frame = 1
BLAST of MELO3C004420 vs. TrEMBL
Match: A0A061F0S3_THECC (RNA-binding ASCH domain protein isoform 2 OS=Theobroma cacao GN=TCM_026212 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 3.3e-104 Identity = 200/316 (63.29%), Postives = 240/316 (75.95%), Query Frame = 1
BLAST of MELO3C004420 vs. TrEMBL
Match: M5W1S4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018471mg PE=4 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 7.4e-104 Identity = 200/308 (64.94%), Postives = 234/308 (75.97%), Query Frame = 1
BLAST of MELO3C004420 vs. TAIR10
Match: AT2G20410.1 (AT2G20410.1 RNA-binding ASCH domain protein) HSP 1 Score: 335.1 bits (858), Expect = 4.5e-92 Identity = 172/334 (51.50%), Postives = 225/334 (67.37%), Query Frame = 1
BLAST of MELO3C004420 vs. NCBI nr
Match: gi|659070741|ref|XP_008456438.1| (PREDICTED: uncharacterized protein LOC103496378 [Cucumis melo]) HSP 1 Score: 621.7 bits (1602), Expect = 6.8e-175 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1
BLAST of MELO3C004420 vs. NCBI nr
Match: gi|449443251|ref|XP_004139393.1| (PREDICTED: uncharacterized protein LOC101222080 [Cucumis sativus]) HSP 1 Score: 578.9 bits (1491), Expect = 5.0e-162 Identity = 290/336 (86.31%), Postives = 296/336 (88.10%), Query Frame = 1
BLAST of MELO3C004420 vs. NCBI nr
Match: gi|567880183|ref|XP_006432650.1| (hypothetical protein CICLE_v10001967mg [Citrus clementina]) HSP 1 Score: 401.4 bits (1030), Expect = 1.4e-108 Identity = 204/309 (66.02%), Postives = 245/309 (79.29%), Query Frame = 1
BLAST of MELO3C004420 vs. NCBI nr
Match: gi|645222772|ref|XP_008218315.1| (PREDICTED: uncharacterized protein LOC103318687 isoform X2 [Prunus mume]) HSP 1 Score: 401.0 bits (1029), Expect = 1.9e-108 Identity = 209/320 (65.31%), Postives = 246/320 (76.88%), Query Frame = 1
BLAST of MELO3C004420 vs. NCBI nr
Match: gi|1009117852|ref|XP_015875541.1| (PREDICTED: uncharacterized protein LOC107412308 [Ziziphus jujuba]) HSP 1 Score: 391.3 bits (1004), Expect = 1.5e-105 Identity = 200/288 (69.44%), Postives = 234/288 (81.25%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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