Cla013622 (gene) Watermelon (97103) v1

Overview
NameCla013622
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionActivating signal cointegrator 1 (AHRD V1 *--- B0WQK0_CULQU); contains Interpro domain(s) IPR007374 ASCH domain
LocationChr2 : 27397441 .. 27400261 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAAGAAATTCTGGGAATTTGTCAAACCCATGTTTGACGATGCATCAGCCATGGGCTTCTCTGCTTGTATATGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCTCCCCTCAGAGGTTCGTTCTTCTCGAAATCCCATGTCCCTTCAAATCTGCTTTTTGGCGCGAGGCTCTGTTTAATTTGTTTGAATGTTCGAGTAACATAAGAGGATGTTAGAATTGGGAAATGGTGCGATTGTAGTTACTTCACTGTTTGCCCTTTGTTTGATTTTGAATCAGATGCTTGTATCTTCCAACCCTAAAATCCAATCGGTTGGGAATTAGCGCGTTTTTTGTCTCTGATTTTCTGTTTCTGAAAACCATGCTTACTGATATTTTTATTGGGGTTTGTTAAATAAATATAATTTCTCCCTTTGACATTCTTGGCCAGAATTTTGAAGCTAACTAGTTATTAAAACTTGGTATTATTTTAGAAATTTGACTTGGATTTCTAGAGCTTTTATAGAGTGAACAACTAGAAGACATTATAATAGAAGGGTTTTTGAGAAATATTGTCAGGTTACTAACTCCCCCATATGCGTTTCACATCTTGTTTCTGATTTAGGCGAATTGCTGATGGAATCATGCAAGTTTGTACGCTATAATAGATGGTGCTATGGTGAATAATAAGGATTTTGAAACTAAAATAATAGACGAAATAATGCTTACAGTTACAATGGCTGCATGCCCGCGATCACCAAAAAAAAAAAAAAAAATGGACATTGTTGGACATTCAATGTTAGTGGGTGTGTGTGTGTGTCTTATTTTGGTTCTTTTGTTTATTTTTTGTATTGGTGTATCTTTTGTTAGTTTCGTGGCCTTCCTTTGTGGATATGATTTAGTAAGGATCATTCTAAATTCTGAATTTGATCTCTGAAGGCCGTCTTTGGATTCATGCTGCGAGTAAGGTTCCTGAGGCTTCTACAATCAAAGCAATGGAGGACTTCTATAGAGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCTGTTTCAAGGCTTTTAGGTATTTAAATCTGATGATTTTTCATGATAACTTATGTTAAAAACTGATTCTTGTGTTTTTTTGGCGCTCTTTTCTGACTCTATTCCAATATTTCAGCAACTGAACTATCTGGTTCCATGTAGTTTATTGTTTGGAGTTGATCATTAAAGTGACACCATCATAATTTCTTAAATTTTTGTTCATTCAGGGTGTGTTGAAGTGGTTGGCTGTGTTCGTGGTGAAGAACTGAAAAGTTGGGATAAAGTACCTGACGGGGTGGGTAGCGTAGTTTTCCTTTTCCATACTTCAGTTTCTGAGATACCTTTTTTTAAAAAAGCTAACAAAAGCATACCTATTTTATTTGAACACAGGTTAGACTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGGTATGTACTGATTTGAACATGATATCAAATTTCCGAGTAATAGTTTACTGAATTGCGGTTCTTTTAATTGTTTCAGAAATTGCTGATTCCATTCGAGATGCGCGGTTACCAGGGTGTTTATAACTTAGAAAAGAGGGTAGGAATGTTAACTTTGTATTGATTCTCTTTTTAATGCTTATTTTGTGTGTTTCCATATGTTCTAAAATTGAATTGCATTTGGTCAGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTAAAATGCATACTGCCTGTAAAGTTTCAACTTCCAGATCCTAGAGATCCATTCTCCTTGGAGCCAGGATCTGTCTCTTCATGTTCTCCCAAGACTAAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGTGATAGCTGGTGCTCGAGCAGCCGCAACTCAGTTTACCAGAAAGTACCAGGACCCCCAAACTTCTGTCCATGACCATACTTCGTCTAATTTTGGAACGGCAGGTAAATCCAAAACTGAATTCTTGGGAGGAGATCAATTTCAATCTTCCAACTTCCATCAAGACGAGGTTTCACGAGCAAATATTGAGGAACAAACTAGTAGCTACCACACTCGATCTCAGGCACTTATTGCACACCCTCATCAGCAAAATGGAGCTCCTTCTAAGGTATGGATTTTTTTCCTTAAAAAAGTTATTATTTTTAAAATGAAGAGGAGCTGTGAACAAAAAAATGACCGTAATTAGGTACTTCATTTTCAAAGATGGTACAAATTGATTTATACTTGGAAAAAAGAAAAAAGGTTCCCCTTGGACTTCTGTTTAACGATTAACATACTTTTATGCGAAGTTTTAGGACGAAAGCAAAATTTGAGGAACTACGAAATAAAAACATCTGAGAGTTTAGGGCCATAATAGGATTTAAATCATGGATATTCCAATCATACTAATGAAAAGATGATTAATTACTGTGTATTAGTAGATATTATTATTAGCCACAATTGCAAATAAATGCAGAAGTTATATTCTTACAGCATGTTCTTAAATCTATAGTCAATTGCAATAGTTTGCAACTAAATTTAGACTAATCTTGAATAGTTCATTGCTTCTTCCACCTCCAACCTGGGTATCTTTATTGAACTGATTAAAACAACCTGATGCTTTCATCTGTTTGCAAAATTGCTACTGTGCTGTACGACTCTTGTCCTATTAACAAAAGTCATTTCAAACTCATTCTAAGATGTTTTGTATTCTTATTTGTGATGCGATTATCAATTGCTACCCGGAATTAATGAGTGGTCTCATGTCGTGTTCAGATCTTTGCCGCTGCATTGAGAGGACTGAGACCGACATGA

mRNA sequence

ATGAAAGGAAGAAATTCTGGGAATTTGTCAAACCCATGTTTGACGATGCATCAGCCATGGGCTTCTCTGCTTGTATATGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCTCCCCTCAGAGGCCGTCTTTGGATTCATGCTGCGAGTAAGGTTCCTGAGGCTTCTACAATCAAAGCAATGGAGGACTTCTATAGAGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCTGTTTCAAGGCTTTTAGGGTGTGTTGAAGTGGTTGGCTGTGTTCGTGGTGAAGAACTGAAAAGTTGGGATAAAGTACCTGACGGGGTTAGACTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGAAATTGCTGATTCCATTCGAGATGCGCGGTTACCAGGGTGTTTATAACTTAGAAAAGAGGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTAAAATGCATACTGCCTGTAAAGTTTCAACTTCCAGATCCTAGAGATCCATTCTCCTTGGAGCCAGGATCTGTCTCTTCATGTTCTCCCAAGACTAAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGTGATAGCTGGTGCTCGAGCAGCCGCAACTCAGTTTACCAGAAAGTACCAGGACCCCCAAACTTCTGTCCATGACCATACTTCGTCTAATTTTGGAACGGCAGGTAAATCCAAAACTGAATTCTTGGGAGGAGATCAATTTCAATCTTCCAACTTCCATCAAGACGAGGTTTCACGAGCAAATATTGAGGAACAAACTAGTAGCTACCACACTCGATCTCAGGCACTTATTGCACACCCTCATCAGCAAAATGGAGCTCCTTCTAAGATCTTTGCCGCTGCATTGAGAGGACTGAGACCGACATGA

Coding sequence (CDS)

ATGAAAGGAAGAAATTCTGGGAATTTGTCAAACCCATGTTTGACGATGCATCAGCCATGGGCTTCTCTGCTTGTATATGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCTCCCCTCAGAGGCCGTCTTTGGATTCATGCTGCGAGTAAGGTTCCTGAGGCTTCTACAATCAAAGCAATGGAGGACTTCTATAGAGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCTGTTTCAAGGCTTTTAGGGTGTGTTGAAGTGGTTGGCTGTGTTCGTGGTGAAGAACTGAAAAGTTGGGATAAAGTACCTGACGGGGTTAGACTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGAAATTGCTGATTCCATTCGAGATGCGCGGTTACCAGGGTGTTTATAACTTAGAAAAGAGGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTAAAATGCATACTGCCTGTAAAGTTTCAACTTCCAGATCCTAGAGATCCATTCTCCTTGGAGCCAGGATCTGTCTCTTCATGTTCTCCCAAGACTAAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGTGATAGCTGGTGCTCGAGCAGCCGCAACTCAGTTTACCAGAAAGTACCAGGACCCCCAAACTTCTGTCCATGACCATACTTCGTCTAATTTTGGAACGGCAGGTAAATCCAAAACTGAATTCTTGGGAGGAGATCAATTTCAATCTTCCAACTTCCATCAAGACGAGGTTTCACGAGCAAATATTGAGGAACAAACTAGTAGCTACCACACTCGATCTCAGGCACTTATTGCACACCCTCATCAGCAAAATGGAGCTCCTTCTAAGATCTTTGCCGCTGCATTGAGAGGACTGAGACCGACATGA

Protein sequence

MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLEPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGTAGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKIFAAALRGLRPT
Homology
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BLAST of Cla013622 vs. Swiss-Prot
Match: TRIP4_HUMAN (Activating signal cointegrator 1 OS=Homo sapiens GN=TRIP4 PE=1 SV=4)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27
Identity = 59/148 (39.86%), Postives = 93/148 (62.84%), Query Frame = 1 

Query: 13  CLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYRELYALD 72
           CL++HQPWASLLV GIKR+EGRSW  P RGRLWI A +K P    +  ++  YR L    
Sbjct: 436 CLSVHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATAKKPSPQEVSELQATYRLLRG-- 495

Query: 73  GITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCEQPQKLL 132
              D++FP  YP   LLGCV+++ C+  ++ K  ++ PD +  E+ + F ++C+ PQ+++
Sbjct: 496 --KDVEFPNDYPSGCLLGCVDLIDCLSQKQFK--EQFPD-ISQESDSPFVFICKNPQEMV 555

Query: 133 IPFEMRGYQGVYNLEKRIFEAAVRGLTR 161
           + F ++G   ++ L+ +I + A +GL +
Sbjct: 556 VKFPIKGNPKIWKLDSKIHQGAKKGLMK 576

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BLAST of Cla013622 vs. Swiss-Prot
Match: TRIP4_MOUSE (Activating signal cointegrator 1 OS=Mus musculus GN=Trip4 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.2e-27
Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 1 

Query: 13  CLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYRELYALD 72
           CL+MHQPWASLLV GIKR+EGRSW  P RGRLWI A  K P    +  ++  YR L    
Sbjct: 436 CLSMHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATGKRPSPQEVSELQATYRLLRG-- 495

Query: 73  GITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCEQPQKLL 132
              D++FP  YP   LLGCV+++ C+  ++ +  ++ PD +  E+ + F ++C+ PQ+++
Sbjct: 496 --KDVEFPNDYPSGCLLGCVDLIDCLSQKQFQ--EQFPD-ISQESDSSFVFICKNPQEMV 555

Query: 133 IPFEMRGYQGVYNLEKRIFEAAVRGLTR 161
           + F ++G   ++ L+ +I + A +GL +
Sbjct: 556 VKFPIKGNPKIWKLDSKIHQGAKKGLMK 576

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BLAST of Cla013622 vs. TrEMBL
Match: A0A0A0LFF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009570 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 5.9e-149
Identity = 270/341 (79.18%), Postives = 284/341 (83.28%), Query Frame = 1 

Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGN SNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNFSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WDKVP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDKVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+TKGSGSEV+KSSKLNA IAGARAAATQFTRKYQDPQ      TSS+FG 
Sbjct: 182 KPGSVSSCSPETKGSGSEVDKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSDFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFH---------------------------------QDEVSRA 300
             KS+TEFLGGDQFQSSNF                                  QD+VSR 
Sbjct: 242 GSKSRTEFLGGDQFQSSNFRQDNVSRGNFEVGMGSKSRTEFLGRDQFQSSHFRQDKVSRG 301

Query: 301 NIEEQTSSYHTRSQALIAHPHQQNGAPSKIFAAALRGLRPT 309
           NI+EQTS YH RSQ L A   QQ+ APSKIFAAA+R L+PT
Sbjct: 302 NIQEQTSGYHVRSQGLFAQRQQQSRAPSKIFAAAVRDLKPT 336

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BLAST of Cla013622 vs. TrEMBL
Match: A0A067EY75_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036173mg PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 204/310 (65.81%), Postives = 243/310 (78.39%), Query Frame = 1 

Query: 1   MKG-RNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIK 60
           M+G R  GN +NPCLTMHQPWASLLVYGIKR+EGRSWPAPLRGRLWIHAASK+PE +TIK
Sbjct: 1   MRGVRKQGNYTNPCLTMHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKIPEEATIK 60

Query: 61  AMEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQT 120
           AME+FYRE+YA++GITDL+FP+HYPVSRLLGCVEVVGCVR EEL SW+ VP+GVRLEAQT
Sbjct: 61  AMEEFYREIYAVNGITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRLEAQT 120

Query: 121 DFCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFS 180
           DFCWLCE PQKLL+PFEMRGYQGVYNLEK+++EAAVRGLT VK  LPVKF LPD +DPFS
Sbjct: 121 DFCWLCENPQKLLVPFEMRGYQGVYNLEKKVYEAAVRGLTPVKGPLPVKFPLPDAQDPFS 180

Query: 181 LEPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFG 240
           L+PGS+S+  P+ K +   VEKSS LNA IAGARAAATQF +K QD  T+V       + 
Sbjct: 181 LKPGSMSTNFPENKSTA--VEKSSTLNAAIAGARAAATQFNKKNQDLLTNVM-QDEKPYA 240

Query: 241 TAGKSKTEFLGGDQF-QSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKIF 300
               SK +   GD F Q ++   +   R  IE + SS H + +  +    Q  GAPS+IF
Sbjct: 241 LRSGSKKKSSDGDAFNQGTSALAENGERNLIEHEESSSHDQPRGQL---KQDPGAPSRIF 300

Query: 301 AAALRGLRPT 309
           AAA++GL+P+
Sbjct: 301 AAAVKGLKPS 304

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BLAST of Cla013622 vs. TrEMBL
Match: V4T3B6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001967mg PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 204/310 (65.81%), Postives = 243/310 (78.39%), Query Frame = 1 

Query: 1   MKG-RNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIK 60
           M+G R  GN +NPCLTMHQPWASLLVYGIKR+EGRSWPAPLRGRLWIHAASK+PE +TIK
Sbjct: 1   MRGVRKQGNYTNPCLTMHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKIPEEATIK 60

Query: 61  AMEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQT 120
           AME+FYRE+YA++GITDL+FP+HYPVSRLLGCVEVVGCVR EEL SW+ VP+GVRLEAQT
Sbjct: 61  AMEEFYREIYAVNGITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRLEAQT 120

Query: 121 DFCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFS 180
           DFCWLCE PQKLL+PFEMRGYQGVYNLEK+++EAAVRGLT VK  LPVKF LPD +DPFS
Sbjct: 121 DFCWLCENPQKLLVPFEMRGYQGVYNLEKKVYEAAVRGLTPVKGPLPVKFPLPDAQDPFS 180

Query: 181 LEPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFG 240
           L+PGS+S+  P+ K +   VEKSS LNA IAGARAAATQF +K QD  T+V       + 
Sbjct: 181 LKPGSMSTNFPENKSTA--VEKSSTLNAAIAGARAAATQFNKKNQDLLTNVM-QDEKPYA 240

Query: 241 TAGKSKTEFLGGDQF-QSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKIF 300
               SK +   GD F Q ++   +   R  IE + SS H + +  +    Q  GAPS+IF
Sbjct: 241 LRSGSKKKSSDGDAFNQGTSALAENGERNLIEHEESSSHDQPRGQL---KQDPGAPSRIF 300

Query: 301 AAALRGLRPT 309
           AAA++GL+P+
Sbjct: 301 AAAVKGLKPS 304

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BLAST of Cla013622 vs. TrEMBL
Match: A0A067JW31_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23537 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.1e-106
Identity = 205/316 (64.87%), Postives = 244/316 (77.22%), Query Frame = 1 

Query: 3   GRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAME 62
           GR+ GN +NPCLTMHQPWASLLVYGIKRIEGRSWPAP+RGRLWIHAASKVPE  TIKAME
Sbjct: 17  GRSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRGRLWIHAASKVPEEETIKAME 76

Query: 63  DFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFC 122
           DFYRE+YAL+GITD+KFPEHYPVSRLLGCVEVVGCV+ EEL SW+ +P G RLE QTDFC
Sbjct: 77  DFYREIYALNGITDIKFPEHYPVSRLLGCVEVVGCVKCEELASWEAIPVGARLEGQTDFC 136

Query: 123 WLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLEP 182
           WLCE PQKLL+PFEMRGYQ VYNLEK+I+EAAVRGL  VK  +PVKF LP+PRDPFSL P
Sbjct: 137 WLCEHPQKLLVPFEMRGYQRVYNLEKKIYEAAVRGLIPVKGPMPVKFPLPNPRDPFSLRP 196

Query: 183 GSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGTAG 242
           GSV+    K     SEVEKSS L AVIAGARAAATQF++K Q   T+   +++SN   + 
Sbjct: 197 GSVAMLPEK----ASEVEKSSTLTAVIAGARAAATQFSKKDQYFLTNTVHNSNSNSTRSD 256

Query: 243 KSKTEFLGGDQFQSSNFHQ---DEVSRANIEEQT-------SSYHTRSQALIAHPHQQNG 302
           ++K + L       +NF++   DE S +N  EQ+       SS H+R++A      +Q  
Sbjct: 257 QAKDKLLEQHNVPQNNFYEGSNDESSVSNEMEQSNGIKDVESSSHSRTRA----DAKQLR 316

Query: 303 APSKIFAAALRGLRPT 309
           AP+KIFAAA++GL+P+
Sbjct: 317 APAKIFAAAVKGLKPS 324

[Close]
BLAST of Cla013622 vs. TrEMBL
Match: A0A061F0S3_THECC (RNA-binding ASCH domain protein isoform 2 OS=Theobroma cacao GN=TCM_026212 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 7.5e-104
Identity = 198/312 (63.46%), Postives = 241/312 (77.24%), Query Frame = 1 

Query: 4   RNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMED 63
           R  GN +NPCLTMHQPWASLLV+GIKRIEGRSWPAP+RGRLWIHAASKVP+ +TIKAMED
Sbjct: 7   RREGNYTNPCLTMHQPWASLLVHGIKRIEGRSWPAPIRGRLWIHAASKVPDEATIKAMED 66

Query: 64  FYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCW 123
           FYRE+YA++GITDLKFPEHYPVSRLLGCVEVVGC+R EEL  W+ +P+GVRLE QTDFCW
Sbjct: 67  FYREIYAVNGITDLKFPEHYPVSRLLGCVEVVGCLRCEELAQWEVLPEGVRLEGQTDFCW 126

Query: 124 LCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLEPG 183
           LCEQP+KLLIPFEMRG+Q VYNLEK+I+EAAVRGL  V+   PVKF LP+PRDPFSL+PG
Sbjct: 127 LCEQPKKLLIPFEMRGFQRVYNLEKKIYEAAVRGLVPVEGPAPVKFPLPNPRDPFSLKPG 186

Query: 184 SVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGTAGK 243
           S+S   P +K S   VE+SS L+A IAGARAAATQF++     ++++   T  +  T+ +
Sbjct: 187 SISVSCPDSKASA--VEQSSSLSAAIAGARAAATQFSKDSNLHKSTIQRSTPES--TSSE 246

Query: 244 SKTEFLGGDQFQSSNFHQDEV---SRAN----IEEQTSSYHTRSQALIAHPHQQNGAPSK 303
            +T  +  +    SN +++ V   S +N     EE+ S  H +S    AH  Q  GAPSK
Sbjct: 247 VQTILVEDNGMPDSNLNEESVKANSASNPCGYFEEERSCSHNQSP---AHLKQHPGAPSK 306

Query: 304 IFAAALRGLRPT 309
           IFAAALRGL+P+
Sbjct: 307 IFAAALRGLKPS 311

[Close]
BLAST of Cla013622 vs. NCBI nr
Match: gi|659070741|ref|XP_008456438.1| (PREDICTED: uncharacterized protein LOC103496378 [Cucumis melo])

HSP 1 Score: 564.7 bits (1454), Expect = 1.0e-157
Identity = 277/308 (89.94%), Postives = 289/308 (93.83%), Query Frame = 1 

Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WD+VP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDEVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+T+GSGSEVEKSSKLNA IAGARAAATQFTRKYQDPQ      TSSNFG 
Sbjct: 182 KPGSVSSCSPETQGSGSEVEKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSNFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKIFAA 300
             KS+TEFLGGDQFQSSNF QD+VSR NIEEQTSSYHTRSQ L AHP QQ+ APSKIFAA
Sbjct: 242 GSKSRTEFLGGDQFQSSNFGQDKVSRENIEEQTSSYHTRSQGLFAHPQQQSRAPSKIFAA 301

Query: 301 ALRGLRPT 309
           A+R LRPT
Sbjct: 302 AVRDLRPT 303

[Close]
BLAST of Cla013622 vs. NCBI nr
Match: gi|449443251|ref|XP_004139393.1| (PREDICTED: uncharacterized protein LOC101222080 [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 8.5e-149
Identity = 270/341 (79.18%), Postives = 284/341 (83.28%), Query Frame = 1 

Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGN SNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNFSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WDKVP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDKVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+TKGSGSEV+KSSKLNA IAGARAAATQFTRKYQDPQ      TSS+FG 
Sbjct: 182 KPGSVSSCSPETKGSGSEVDKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSDFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFH---------------------------------QDEVSRA 300
             KS+TEFLGGDQFQSSNF                                  QD+VSR 
Sbjct: 242 GSKSRTEFLGGDQFQSSNFRQDNVSRGNFEVGMGSKSRTEFLGRDQFQSSHFRQDKVSRG 301

Query: 301 NIEEQTSSYHTRSQALIAHPHQQNGAPSKIFAAALRGLRPT 309
           NI+EQTS YH RSQ L A   QQ+ APSKIFAAA+R L+PT
Sbjct: 302 NIQEQTSGYHVRSQGLFAQRQQQSRAPSKIFAAAVRDLKPT 336

[Close]
BLAST of Cla013622 vs. NCBI nr
Match: gi|567880183|ref|XP_006432650.1| (hypothetical protein CICLE_v10001967mg [Citrus clementina])

HSP 1 Score: 397.9 bits (1021), Expect = 1.6e-107
Identity = 204/310 (65.81%), Postives = 243/310 (78.39%), Query Frame = 1 

Query: 1   MKG-RNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIK 60
           M+G R  GN +NPCLTMHQPWASLLVYGIKR+EGRSWPAPLRGRLWIHAASK+PE +TIK
Sbjct: 1   MRGVRKQGNYTNPCLTMHQPWASLLVYGIKRVEGRSWPAPLRGRLWIHAASKIPEEATIK 60

Query: 61  AMEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQT 120
           AME+FYRE+YA++GITDL+FP+HYPVSRLLGCVEVVGCVR EEL SW+ VP+GVRLEAQT
Sbjct: 61  AMEEFYREIYAVNGITDLQFPQHYPVSRLLGCVEVVGCVRCEELASWEVVPEGVRLEAQT 120

Query: 121 DFCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFS 180
           DFCWLCE PQKLL+PFEMRGYQGVYNLEK+++EAAVRGLT VK  LPVKF LPD +DPFS
Sbjct: 121 DFCWLCENPQKLLVPFEMRGYQGVYNLEKKVYEAAVRGLTPVKGPLPVKFPLPDAQDPFS 180

Query: 181 LEPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFG 240
           L+PGS+S+  P+ K +   VEKSS LNA IAGARAAATQF +K QD  T+V       + 
Sbjct: 181 LKPGSMSTNFPENKSTA--VEKSSTLNAAIAGARAAATQFNKKNQDLLTNVM-QDEKPYA 240

Query: 241 TAGKSKTEFLGGDQF-QSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKIF 300
               SK +   GD F Q ++   +   R  IE + SS H + +  +    Q  GAPS+IF
Sbjct: 241 LRSGSKKKSSDGDAFNQGTSALAENGERNLIEHEESSSHDQPRGQL---KQDPGAPSRIF 300

Query: 301 AAALRGLRPT 309
           AAA++GL+P+
Sbjct: 301 AAAVKGLKPS 304

[Close]
BLAST of Cla013622 vs. NCBI nr
Match: gi|645222772|ref|XP_008218315.1| (PREDICTED: uncharacterized protein LOC103318687 isoform X2 [Prunus mume])

HSP 1 Score: 394.0 bits (1011), Expect = 2.3e-106
Identity = 203/319 (63.64%), Postives = 244/319 (76.49%), Query Frame = 1 

Query: 2   KGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAM 61
           +G +SGN  NPCLTMHQPWASLLVYGIKRIEGR+W AP+RGRLWIHAASKVP+ +TIKAM
Sbjct: 3   RGHSSGNYRNPCLTMHQPWASLLVYGIKRIEGRTWAAPIRGRLWIHAASKVPDEATIKAM 62

Query: 62  EDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDF 121
           EDFYRE+YA+DGITDL+FPEHYPVSRLLGCVEVVGCVR EEL  W+ VP+GVRLEAQTD 
Sbjct: 63  EDFYREIYAVDGITDLRFPEHYPVSRLLGCVEVVGCVRREELACWEMVPEGVRLEAQTDL 122

Query: 122 CWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLE 181
           CWLCEQPQKLLIPFEMRGYQGVYNLEK+I+EAA+RGLT V+  LPVKF LP+P+DPFSL+
Sbjct: 123 CWLCEQPQKLLIPFEMRGYQGVYNLEKKIYEAAIRGLTPVEGPLPVKFLLPNPQDPFSLK 182

Query: 182 PGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGTA 241
           PGS+S+  P+T+   SE+E+SS L A IAGARAAATQF+++ QD +T+   +T+ +  T 
Sbjct: 183 PGSISANVPETR--TSELERSSSLTAAIAGARAAATQFSKRVQDFETTPQTNTAQSVRTL 242

Query: 242 GKSKTEFLGGDQFQSSNF------------HQDEVSRANIEEQTSSYHTRSQALIAHPHQ 301
              K E    D   S+N             +++++S    E  TS     S  L  HP  
Sbjct: 243 -PLKCESFEEDTTPSANLSETSNKGALTSNNKEKISPIKSEGITSPSQPSSGGLRPHP-- 302

Query: 302 QNGAPSKIFAAALRGLRPT 309
             GAPSKIFAAA+R L+P+
Sbjct: 303 --GAPSKIFAAAVRALKPS 314

[Close]
BLAST of Cla013622 vs. NCBI nr
Match: gi|802758895|ref|XP_012089316.1| (PREDICTED: uncharacterized protein LOC105647732 [Jatropha curcas])

HSP 1 Score: 393.7 bits (1010), Expect = 3.0e-106
Identity = 205/316 (64.87%), Postives = 244/316 (77.22%), Query Frame = 1 

Query: 3   GRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAME 62
           GR+ GN +NPCLTMHQPWASLLVYGIKRIEGRSWPAP+RGRLWIHAASKVPE  TIKAME
Sbjct: 17  GRSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRGRLWIHAASKVPEEETIKAME 76

Query: 63  DFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFC 122
           DFYRE+YAL+GITD+KFPEHYPVSRLLGCVEVVGCV+ EEL SW+ +P G RLE QTDFC
Sbjct: 77  DFYREIYALNGITDIKFPEHYPVSRLLGCVEVVGCVKCEELASWEAIPVGARLEGQTDFC 136

Query: 123 WLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLEP 182
           WLCE PQKLL+PFEMRGYQ VYNLEK+I+EAAVRGL  VK  +PVKF LP+PRDPFSL P
Sbjct: 137 WLCEHPQKLLVPFEMRGYQRVYNLEKKIYEAAVRGLIPVKGPMPVKFPLPNPRDPFSLRP 196

Query: 183 GSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGTAG 242
           GSV+    K     SEVEKSS L AVIAGARAAATQF++K Q   T+   +++SN   + 
Sbjct: 197 GSVAMLPEK----ASEVEKSSTLTAVIAGARAAATQFSKKDQYFLTNTVHNSNSNSTRSD 256

Query: 243 KSKTEFLGGDQFQSSNFHQ---DEVSRANIEEQT-------SSYHTRSQALIAHPHQQNG 302
           ++K + L       +NF++   DE S +N  EQ+       SS H+R++A      +Q  
Sbjct: 257 QAKDKLLEQHNVPQNNFYEGSNDESSVSNEMEQSNGIKDVESSSHSRTRA----DAKQLR 316

Query: 303 APSKIFAAALRGLRPT 309
           AP+KIFAAA++GL+P+
Sbjct: 317 APAKIFAAAVKGLKPS 324

The following BLAST results are available for this feature:
BLAST of Cla013622 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRIP4_HUMAN1.7e-2739.86Activating signal cointegrator 1 OS=Homo sapiens GN=TRIP4 PE=1 SV=4[more]
TRIP4_MOUSE2.2e-2739.86Activating signal cointegrator 1 OS=Mus musculus GN=Trip4 PE=1 SV=2[more]
BLAST of Cla013622 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFF1_CUCSA5.9e-14979.18Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009570 PE=4 SV=1[more]
A0A067EY75_CITSI1.1e-10765.81Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036173mg PE=4 SV=1[more]
V4T3B6_9ROSI1.1e-10765.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001967mg PE=4 SV=1[more]
A0A067JW31_JATCU2.1e-10664.87Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23537 PE=4 SV=1[more]
A0A061F0S3_THECC7.5e-10463.46RNA-binding ASCH domain protein isoform 2 OS=Theobroma cacao GN=TCM_026212 PE=4 ... [more]
BLAST of Cla013622 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070741|ref|XP_008456438.1|1.0e-15789.94PREDICTED: uncharacterized protein LOC103496378 [Cucumis melo][more]
gi|449443251|ref|XP_004139393.1|8.5e-14979.18PREDICTED: uncharacterized protein LOC101222080 [Cucumis sativus][more]
gi|567880183|ref|XP_006432650.1|1.6e-10765.81hypothetical protein CICLE_v10001967mg [Citrus clementina][more]
gi|645222772|ref|XP_008218315.1|2.3e-10663.64PREDICTED: uncharacterized protein LOC103318687 isoform X2 [Prunus mume][more]
gi|802758895|ref|XP_012089316.1|3.0e-10664.87PREDICTED: uncharacterized protein LOC105647732 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007374ASCH_domain
IPR015947PUA-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006366 transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003713 transcription coactivator activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU29728watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU70979watermelon EST collection version 2.0transcribed_cluster
WMU73833watermelon EST collection version 2.0transcribed_cluster
WMU73973watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013622Cla013622.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU29728WMU29728transcribed_cluster
WMU73973WMU73973transcribed_cluster
WMU73833WMU73833transcribed_cluster
WMU70979WMU70979transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007374ASCH domainPFAMPF04266ASCHcoord: 14..111
score: 8.3
IPR015947PUA-like domainunknownSSF88697PUA domain-likecoord: 86..147
score: 3.43E-22coord: 12..49
score: 3.43
NoneNo IPR availableGENE3DG3DSA:2.30.130.30coord: 12..49
score: 1.4E-29coord: 86..149
score: 1.4
NoneNo IPR availablePANTHERPTHR12963THYROID RECEPTOR INTERACTING PROTEIN RELATEDcoord: 1..161
score: 7.0E