MELO3C003271 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C003271
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTriosephosphate isomerase
Locationchr8 : 31954334 .. 31955224 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAACAACCGTGCACAACAAAGAAGATTAGAAAGCTATTGATCGATCCTCATGCCTTTGCATCAATGTTAGGGAATGAGTCGTGTGAAGGAAACAAGGAAGACGAAGAATCAAAAGAAACTCTAACATTGGTCAAAGAAATGCCTAAAATAGAGACAGATATTGTTGGACACAATCGAAGCAAGTTTTCAAAGATAAATCAGAACAAGACAAAAGAAGGCAAGAAAAATCAGAGAAGGGTCGAGGATAGAGAAAAATATCATAGCAAAGGCATTTGGAGAGAGATCAATTGGAGAGTGATCGAGATCTTATCAAATTTAAATGGCCAAGGAGATGAGCATGTTCGCACAATGAAAAAGGAACACGAGCATGAGTGGAGGAAGAAAGTTGGAAAGACATACCTAATACCAACGGAGATACATAAAAACAAGAGGAAGAGGAAACCAAGAAAACTAGCATGGTCAAAGGTAAACTCTTGAGGATAACGTGGTTGCAATGGCTGCATAGAAATGGTGAACAGATCAACGAAGAGTGACCAAGAAGAAACTAGAGGAAGGTCAACAATGATTGCTTGTGAGACCAGAAGTGAAGACTCGAATGAGGAAAAGGTTCTTGCTAAAGAAGCACAAAATGGTTGGCTGAGATGGAGAAAAATGTTGGCAGATCAATGGTTGGGATGGTAAATACCTTGGTAGATTGAATCATTGTTGACTACGCGGAAAGGAGTTAACGAGAGGTTGATGAGAGTGGAAACGCTGGTTATGGTAGTCGCAGCCGAGTTACAGTGGTCGAAGGTACTAGAAATGGCAGAAGAAGTCGAGCTATGGTTGTCAGAGAAGAAGGCTAGGGGAAAAGGTGAATTGCATGAAAGGATGGGAACACATTAG

mRNA sequence

ATGGTGGAACAACCGTGCACAACAAAGAAGATTAGAAAGCTATTGATCGATCCTCATGCCTTTGCATCAATGTTAGGGAATGAGTCGTGTGAAGGAAACAAGGAAGACGAAGAATCAAAAGAAACTCTAACATTGGTCAAAGAAATGCCTAAAATAGAGACAGATATTGTTGGACACAATCGAAGCAAGTTTTCAAAGATAAATCAGAACAAGACAAAAGAAGGCAAGAAAAATCAGAGAAGGGTCGAGGATAGAGAAAAATATCATAGCAAAGGCATTTGGAGAGAGATCAATTGGAGAGTGATCGAGATCTTATCAAATTTAAATGGCCAAGGAGATGAGCATGTTCGCACAATGAAAAAGGAACACGAGCATGAGTGGAGGAAGAAAGTTGGAAAGACATACCTAATACCAACGGAGATACATAAAAACAAGAGGAAGAGGAAACCAAGAAAACTAGCATGGTCAAAGATTGAATCATTGTTGACTACGCGGAAAGGAGTTAACGAGAGGTTGATGAGAGTGGAAACGCTGGTTATGGTAGTCGCAGCCGAGTTACAGTGGTCGAAGGTACTAGAAATGGCAGAAGAAGTCGAGCTATGGTTGTCAGAGAAGAAGGCTAGGGGAAAAGGTGAATTGCATGAAAGGATGGGAACACATTAG

Coding sequence (CDS)

ATGGTGGAACAACCGTGCACAACAAAGAAGATTAGAAAGCTATTGATCGATCCTCATGCCTTTGCATCAATGTTAGGGAATGAGTCGTGTGAAGGAAACAAGGAAGACGAAGAATCAAAAGAAACTCTAACATTGGTCAAAGAAATGCCTAAAATAGAGACAGATATTGTTGGACACAATCGAAGCAAGTTTTCAAAGATAAATCAGAACAAGACAAAAGAAGGCAAGAAAAATCAGAGAAGGGTCGAGGATAGAGAAAAATATCATAGCAAAGGCATTTGGAGAGAGATCAATTGGAGAGTGATCGAGATCTTATCAAATTTAAATGGCCAAGGAGATGAGCATGTTCGCACAATGAAAAAGGAACACGAGCATGAGTGGAGGAAGAAAGTTGGAAAGACATACCTAATACCAACGGAGATACATAAAAACAAGAGGAAGAGGAAACCAAGAAAACTAGCATGGTCAAAGATTGAATCATTGTTGACTACGCGGAAAGGAGTTAACGAGAGGTTGATGAGAGTGGAAACGCTGGTTATGGTAGTCGCAGCCGAGTTACAGTGGTCGAAGGTACTAGAAATGGCAGAAGAAGTCGAGCTATGGTTGTCAGAGAAGAAGGCTAGGGGAAAAGGTGAATTGCATGAAAGGATGGGAACACATTAG

Protein sequence

MVEQPCTTKKIRKLLIDPHAFASMLGNESCEGNKEDEESKETLTLVKEMPKIETDIVGHNRSKFSKINQNKTKEGKKNQRRVEDREKYHSKGIWREINWRVIEILSNLNGQGDEHVRTMKKEHEHEWRKKVGKTYLIPTEIHKNKRKRKPRKLAWSKIESLLTTRKGVNERLMRVETLVMVVAAELQWSKVLEMAEEVELWLSEKKARGKGELHERMGTH*
Homology
[Close]
BLAST of MELO3C003271 vs. TrEMBL
Match: A0A0A0KT09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652820 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-07
Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 1 

Query: 1  MVEQPCTTKKIRKLLIDPHAFASMLGNESCEGNKEDEESKETLTLVKEMPKIETDIVGHN 60
          M EQ  TT +IR LLI  HAF S+L +ES E  K+DEE  ET  LVKE+ KIETD     
Sbjct: 1  MEEQHFTTNEIRHLLIGHHAFGSLLVDESSEVKKDDEELGETPMLVKEVWKIETD----- 60

Query: 61 RSKFSKINQNKTKEGKK 78
                  QNKTKE K+
Sbjct: 61 --------QNKTKESKE 64

[Close]
BLAST of MELO3C003271 vs. NCBI nr
Match: gi|700197551|gb|KGN52728.1| (hypothetical protein Csa_5G652820 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-07
Identity = 40/77 (51.95%), Postives = 46/77 (59.74%), Query Frame = 1 

Query: 1  MVEQPCTTKKIRKLLIDPHAFASMLGNESCEGNKEDEESKETLTLVKEMPKIETDIVGHN 60
          M EQ  TT +IR LLI  HAF S+L +ES E  K+DEE  ET  LVKE+ KIETD     
Sbjct: 1  MEEQHFTTNEIRHLLIGHHAFGSLLVDESSEVKKDDEELGETPMLVKEVWKIETD----- 60

Query: 61 RSKFSKINQNKTKEGKK 78
                  QNKTKE K+
Sbjct: 61 --------QNKTKESKE 64

The following BLAST results are available for this feature:
BLAST of MELO3C003271 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT09_CUCSA6.2e-0751.95Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652820 PE=4 SV=1[more]
BLAST of MELO3C003271 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197551|gb|KGN52728.1|8.8e-0751.95hypothetical protein Csa_5G652820 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003271T1MELO3C003271T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C003271CSPI04G19500Wild cucumber (PI 183967)cpimeB325
MELO3C003271CsGy4G018400Cucumber (Gy14) v2cgybmeB281
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003271Cucurbita pepo (Zucchini)cpemeB066
MELO3C003271Cucurbita pepo (Zucchini)cpemeB453
MELO3C003271Bottle gourd (USVL1VR-Ls)lsimeB153
MELO3C003271Silver-seed gourdcarmeB0480
MELO3C003271Silver-seed gourdcarmeB0521
MELO3C003271Cucumber (Chinese Long) v3cucmeB329
MELO3C003271Watermelon (97103) v2mewmbB543
MELO3C003271Cucumber (Gy14) v1cgymeB303
MELO3C003271Cucurbita maxima (Rimu)cmameB616
MELO3C003271Cucurbita maxima (Rimu)cmameB812
MELO3C003271Cucurbita moschata (Rifu)cmomeB611
MELO3C003271Cucurbita moschata (Rifu)cmomeB796
MELO3C003271Cucumber (Chinese Long) v2cumeB328
MELO3C003271Watermelon (Charleston Gray)mewcgB535