MELO3C002913 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002913
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Serine/threonine-protein kinase
Location	chr9 : 7528990 .. 7529319 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGATTCTACGCCCCTTCACTGCCGTTTCACCACGATTTGGCCGTTGCTGCAACACAGATGCCATTACAACTCTTCAAATTCGACAAAATTCCGGCCACCCCACCTCAATTTGTCTCTTATCCAGGGATCCGGACCAATGGGGTTTCCTGCTTTTGCCATGAAGAGGTTGGGGAAAGGCGACATTGCCCTCACTGAGCCGAGTGATTCCGACGTTGACTTTAATGAATTTTTCGATGCGGATGAGGATAAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGTGCGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGTGTATGA

mRNA sequence

ATGCTCGATTCTACGCCCCTTCACTGCCGTTTCACCACGATTTGGCCGTTGCTGCAACACAGATGCCATTACAACTCTTCAAATTCGACAAAATTCCGGCCACCCCACCTCAATTTGTCTCTTATCCAGGGATCCGGACCAATGGGGTTTCCTGCTTTTGCCATGAAGAGGTTGGGGAAAGGCGACATTGCCCTCACTGAGCCGAGTGATTCCGACGTTGACTTTAATGAATTTTTCGATGCGGATGAGGATAAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGTGCGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGTGTATGA

Coding sequence (CDS)

ATGCTCGATTCTACGCCCCTTCACTGCCGTTTCACCACGATTTGGCCGTTGCTGCAACACAGATGCCATTACAACTCTTCAAATTCGACAAAATTCCGGCCACCCCACCTCAATTTGTCTCTTATCCAGGGATCCGGACCAATGGGGTTTCCTGCTTTTGCCATGAAGAGGTTGGGGAAAGGCGACATTGCCCTCACTGAGCCGAGTGATTCCGACGTTGACTTTAATGAATTTTTCGATGCGGATGAGGATAAGATTCTTTTGCCGTTAAAGAACACGAGAGAGTGGTGCGGCGAGGCCTCGTGGGTTTGGAGAAGGGAAGGTGTATGA

Protein sequence

MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGKGDIALTEPSDSDVDFNEFFDADEDKILLPLKNTREWCGEASWVWRREGV*

Homology

[Close]

BLAST of MELO3C002913 vs. TrEMBL
Match: A0A0A0KS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G488780 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GDIALTEPSDSDVDFNEFFD------ADEDKILLPLKNTREW 97
           G IALTEPSDSD+ F+EFFD       DED ILLPLKNT+EW
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 142

[Close]

BLAST of MELO3C002913 vs. TrEMBL
Match: A0A0A0KQN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G488800 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GDIALTEPSDSDVDFNEFFD------ADEDKILLPLKNTREW 97
           G IALTEPSDSD+ F+EFFD       DED ILLPLKNT+EW
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 142

[Close]

BLAST of MELO3C002913 vs. NCBI nr
Match: gi|659131441|ref|XP_008465688.1| (PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 5.5e-42
Identity = 87/110 (79.09%), Postives = 91/110 (82.73%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           MLDSTPLHCRFTTI PLLQH CHYNSSNSTKFRPPHLNLSLIQGSGPMGFP FAMKRLGK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GDIALTEPSDSDVDFNEFFD--------------ADEDKILLPLKNTREW 97
           G IALT+PSDSD+DF+EFFD               DED+ILLPLKNTREW
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREW 110

[Close]

BLAST of MELO3C002913 vs. NCBI nr
Match: gi|700196025|gb|KGN51202.1| (hypothetical protein Csa_5G488780 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GDIALTEPSDSDVDFNEFFD------ADEDKILLPLKNTREW 97
           G IALTEPSDSD+ F+EFFD       DED ILLPLKNT+EW
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 142

[Close]

BLAST of MELO3C002913 vs. NCBI nr
Match: gi|778703040|ref|XP_011655304.1| (PREDICTED: uncharacterized protein LOC105435514 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GDIALTEPSDSDVDFNEFFD------ADEDKILLPLKNTREW 97
           G IALTEPSDSD+ F+EFFD       DED ILLPLKNT+EW
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 102

[Close]

BLAST of MELO3C002913 vs. NCBI nr
Match: gi|700196027|gb|KGN51204.1| (hypothetical protein Csa_5G488800 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GDIALTEPSDSDVDFNEFFD------ADEDKILLPLKNTREW 97
           G IALTEPSDSD+ F+EFFD       DED ILLPLKNT+EW
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 142

[Close]

BLAST of MELO3C002913 vs. NCBI nr
Match: gi|778703057|ref|XP_011655307.1| (PREDICTED: uncharacterized protein LOC101210443 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-38
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 1


Query: 1   MLDSTPLHCRFTTIWPLLQHRCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPAFAMKRLGK 60
           M DSTPLHC FTTI PLLQH CHYNSS STKFRPPHLNLSLIQ SGPMGFP FA+KRLGK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GDIALTEPSDSDVDFNEFFD------ADEDKILLPLKNTREW 97
           G IALTEPSDSD+ F+EFFD       DED ILLPLKNT+EW
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEW 102

The following BLAST results are available for this feature:

BLAST of MELO3C002913 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS07_CUCSA	1.2e-38	79.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G488780 PE=4 SV=1	[more]
A0A0A0KQN3_CUCSA	1.2e-38	79.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G488800 PE=4 SV=1	[more]

BLAST of MELO3C002913 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131441\|ref\|XP_008465688.1\|	5.5e-42	79.09	PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo]	[more]
gi\|700196025\|gb\|KGN51202.1\|	1.7e-38	79.41	hypothetical protein Csa_5G488780 [Cucumis sativus]	[more]
gi\|778703040\|ref\|XP_011655304.1\|	1.7e-38	79.41	PREDICTED: uncharacterized protein LOC105435514 [Cucumis sativus]	[more]
gi\|700196027\|gb\|KGN51204.1\|	1.7e-38	79.41	hypothetical protein Csa_5G488800 [Cucumis sativus]	[more]
gi\|778703057\|ref\|XP_011655307.1\|	1.7e-38	79.41	PREDICTED: uncharacterized protein LOC101210443 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002913T1	MELO3C002913T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C002913	Bhi06G000655	Wax gourd	mewgoB023
MELO3C002913	Bhi06G000546	Wax gourd	mewgoB030

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002913	Cucumber (Gy14) v1	cgymeB460
MELO3C002913	Cucurbita maxima (Rimu)	cmameB716
MELO3C002913	Cucurbita moschata (Rifu)	cmomeB135
MELO3C002913	Cucurbita moschata (Rifu)	cmomeB705
MELO3C002913	Wild cucumber (PI 183967)	cpimeB350
MELO3C002913	Cucumber (Chinese Long) v2	cumeB361
MELO3C002913	Watermelon (Charleston Gray)	mewcgB002
MELO3C002913	Watermelon (97103) v1	mewmB003
MELO3C002913	Cucurbita pepo (Zucchini)	cpemeB078
MELO3C002913	Cucurbita pepo (Zucchini)	cpemeB741
MELO3C002913	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C002913	Cucumber (Gy14) v2	cgybmeB300
MELO3C002913	Silver-seed gourd	carmeB1030
MELO3C002913	Cucumber (Chinese Long) v3	cucmeB359
MELO3C002913	Watermelon (97103) v2	mewmbB038