MELO3C002865 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C002865
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDNA primase/helicase
Locationchr12 : 18145280 .. 18156415 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAGGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTTCTGGATTGGTAATTGATCCTTATAATGAGCTTGACCATCAACGGCTTCCAAATCAGTGAGTTTTATCATTATGTTAGTTCTTTGAAGATGGAGTAACCCATGATATCTCCTGTAGTTTTCAACCACTGACTGATGGCTATGGTTTCTTTGGTCGCAATGATAATTTTTTTTTCCTGTTATTTATTTGTTCATTTTTGGGTTGTTATGATCCCTTGTATTCCCGAAAAGATTTTGCATCCATTTATTCCCTTGGTAGAGTGTTTTGTCTCGGATCTAATGAGAAAAAACCTTGCTGATAATTTAACTTTGTAAGCTCTGAAGGAGCAGTTCCAATATATGTCATTAACTTTCATAGTTCACTAATTGGCATCGAATTAAATAACTCTATTACACAGTGAAATCCTATCCAAATTTTTAATAGCTTCACCACCCCTAGAGAAATTCATATTTCAAGTCCTTGTGAAGTCCAAAAGTCCCAAAAGAATCAACATTCTAACATAGATTATGCTATTCAGATCCCTAAACTGCTCAACCACTTTTTAAGCAAAGGTAAAAGACCTTTCCTTTTCTCCTTCAGTCTGTCCACTTTGCTGTGCTTCCGCAGAGGATCTTCAACACTTATTCTTCGAATGCTCATTCTCTAGAAATTGTTGTTGGAAGCTATTCTCTTATTTCAACCTTAAATGGGCTTCCGAATCAACCTTCAGAGCTAATGTATATCAGGTAATTGGCAGTCCAAATTTATCATCTAAACCGTAAATTCTTTGGTCAAATGTGGTCAAAGCCATCCTCTCATAATTATGGTTCGAGTGAAATCAAAGAGTTTTTCATGACAAATCTATTGGCTGGTCGGATCGATTTGCCTCTGCTCGTTTGTTAGCCTTCTCATGGTGCTCTTCCTCAATTGTTTGCCAATTACACCATCCATGACATCTTTCTTAATTCGAACGTGTTTATTTCCCCTGTTTAATATCTTTATATTTTAATACCTTAATTAGATTGTAGCTTCTTGTACTGTTTTCCAGGTGTTCAAAAATGGAACTTTGTATCATTAGAACTCTCTTGTATCCAATATTGAGCATTGTCTCGACTACCATATAAATAGATTTCTTTCCTTTTCAAAAAAGAAAAAGAAAGAAAATTGAAGAGCATTCCAAACATAAACGTGACCTGTGAATTGTTTGAATCATATAGGCAGATTGAGTTCTTGACATGACATGTTTTATTAATCAACTCCATATAGCGTGTACTTCTTATTGTTTGGCAGTCTTGTTTGAAACTCTTCAGCTCCACGACTTGCTTATTTTTCCTATGCTCTTAGATAGGATAGTCAAATTTCCGGGTGTCTTCCAAAATCCAAGCATTATTTGTGTTATATCTGTTATATATATCAACTTTGTAGGTTCAAAAAATTCATTTATTTTTTTTTCCTGGCTGGCTTGCAGAAAGTTATAAACTATGAGATTTGACCTTTGCTTTTCACCTTTTGTTTTTATTGTACAGTTAACTAGAAGTTCGAAGTTTTTTTGTGACAGAACTGAAACAGAGTATGTGAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCATCATCATGGTTGCCATGTTTGGTTTGTTGCACATCCTAGGCAGGTTAGTTTTCGAACTGTTATTTTTCCTTTTTGTTTGATAAAATACATTATCAAGGAAGAAAAGAAATACAAGGAGATACAAAAGAAAAAAAAAGGCTCACAGAAGGGAGCACTGTAAAGAAAGGTTTTCAAATCAGGCGAATTATAATCAAACGAATAAACAAGGGGTTTTGACAATTTGCCATGAATGCCCAAGGAGAATCATTAAAACTTACCAAGGATGGTTACTTCCTGTAAAAGCTTGTCTAAGGTGTTAATTTTTCCAAGAATAGCGTTCTAAATAAAAAAGCTTCCTAGGAAGAGAATGGTCCACAAAAAAAAGGTCAGTAGAACTTCACCTGTGGGGCCTTTTCTGTTGAATCCTTTGTCAGAAGGCGAAGGAAGATCTTAATCATCTCTTTTGGGATTGCCGGTTTGTGAGAACGGTGTGGAATCTTTTCTTGCAGAAGTTCGACGTTAGCTTCGTTTGGCAAAGAGATGTTTGTGCGATAATCGATGAGTTTCTCCTCCATTTGCCTTTTCAGAGAAAGGCCGCTTCTTGTTGTTTGCTGGGGTGCGTTTGGTGGTTTGAGATATGGTGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGAACCCTTTGATGGTTTGGCCGGTTTGGCCTTTAGTGATATTTTATGTATCTCTTTGGGCTTCAGTCTCAAAGCTTTTTTGTAATTGTATCTTAGGAAGCATTTCCCTTAGTTGGACCCCTAACATTTTTTTCTCAATAAAAGTAGTTGTTTCCGTTAAAAATAGTGAGCTTGTGTGTTGAAAGCTCAAGAAAAGTTTTGTAATTTGTGTTACCCTAATTATTCTTTTCTTTTTTAATTAGGCTCTTGTTACGTATTAGTTCTCTCTCTTGTACGTTTTTGTTCAATAAGAAATTCTCTACTATGGTTTTTCTCCTTATACTAGAGTTTCCAGGTAAACTTATGTGTTCGTTCTTTATTGTTATTTTCAATATGGTATTTAAGCAGGATATGAAACTCTAGACAAAACCACTTTTGATGGAACCTGAACAGAGGAGACTGTTGGGACTGTCGTTGACATTCGCACCGTCGCCATGGAGTAGCTTTTCCACCACCTTCAAACCATGCCGATTGGTGCAACCTCTCAGTCGCACTCAACCAGCCGCAATCTTTCGTCCACCCGCCGCTGATCTATCCTAACCAACCGCAGCTACACCCAAGTCGACCTCAGTTGCCGTCTGTTGCCTAGCCACTAGTCCTTGTCCAGCTGCTAACCCTAGACCTCTTTACTATATTGTCGTAAACCCTAGACCATCTCGCCGCAAATCTAACACTGTCCAACCGCCAACTTTGTCGCAAACCATAATTCCATCCAACTCTGCCACTAACCAAATCCTACACCACTACCCCACCAGACACTATACCTCACTGGAAACTCTTTCCAATTATCACCTTGGTGTTGGTAATCCTCATATCCAATCAACTTTTGAGGTTGGTGAATCTTTAGCTTAGTCCAAACCTTACGTGCAAAATTTTTCTCAAGGTACCATCCAATAACAACTAGACATACTTTAATAGCTAGTTAAGGCAATGTTAGAGGCTCATACTAATATTCCCTCTCGCAATCTTTATCCAACCATACGAATGTATTCCACGAATCTGGTACCTTTGCTCCCTACCTTACGTGTCTAGTTCTGTGGCATAGACTATAGAAGTCATTATAGGGGAGAAACTGAATTGCCACAATCCGTAAAATGATTCTTGAGGAGATCCCTGGGAACGGTACACCAGAATGCCTCTTGCCACTACACACAGTGAAAATTGGCCAAACAAGGGACTTTAGATGTAACATCCTATTTTAACAAACTTTCTCTAATTTGGTAGGAAGTGGATTTTTGTAGAGAAATTGTCTGAATTGTCCCGGTGATGGTGTATAGTACTCTAGAATTGAAGATGTTGATAGAATATATGACTTCCTTGGTGGCCTCAATTTGAAGTACGATATAGTCCATGGGCATATACTGGGCTTGGGCTAGAGACCTATTCCTTCTTTGATGAAGGTTTGTTCTGAAATCTGACTTGAGGAGGACCGTACAAGCGCTAAGAATATCTTAACCACCTTTGCATTTATTCCACTGCCTTCAGTTCGAGGCCCTCTACTGATGACAGCGAGAAACACAACGAAAAATCTCTCCGACTTTGAGCATTGCAAGAAACAGCAGCACACAAATTACATGATCGTCCCCTAGGAGGTAAGAAACGTCCTCCGAACGACAAACAAAATTCAGGGCGAGCTTATGTGAGTAAGTCTGCTGGAACTTTTCAACCATTTGGTTACATTAGAAACCAAAGCGATCCTAGTCCTACCACACTAGGAGCTATTGCCCTATCCGATATTCCTTAGTCCCTCAAGACCCTTGGATTTTGGATTCAGGTGCTACAAATCATCTGATAAGTTTCTCAGAGAATTTTGTTTCCAATTTTTCGTGTCGGTAACGAAACATTTAAAATTGCAAATGGCTCCTTGGCCTTAATGTTGCGAAGGGGCAAATCTTTCCTTTTGAAGGCTACCCTTACGTAATGTGCTGCATGTGCCCAAAATTTCTTATAATTTGCTATCTATAAATAAGATTACCTATGAGCTACATTGCAAAGCAACTTTCGTACCTAGTTCTTTTTCTTTTCAGGACTTTAGCTTGGGGAGGATGATTGGCACTGTCTGGCAGAGTAGGGGACTCTACATCCTTGATGATGATGCTTCCTCTAGTAGCACCTCTAGCACTAGTGTTTTACCTTTGTACTTTAGTATTTCTGAGAAAGACCGTATGTTGTGACATTTTTGTTTGGGCCACCCAAATTTTTAATATATGAAACATTTATTTCCTCGTCTTTTCTCTATTGTTGATGTTTCTACCTTATATGTGATGTGTGTATTTGGGCTAAACAACATCGAGTCTCTTTTCCTTCACAGTCATACAAACCAATCCAACCTTTCACTTTTATCCACAGTGACGTTTGGGGGAGTGGTCCAAGGTTACAACTGCTTCTGGGAAATAGTGATTTTTGACCTTCATTGATGATTATACTTGTTTTACCTGGGTCTTTCTCATCTTTGACAAATTCGAGGTCTCATCCATATTTCGAGACTTTTATCACACCGTAGAAATGCAGTTCAATGCAAAATTGATATTCTACGGAGTGACAATTGTCGTTAGTTTCAAAACCATTCTCTCAATGAGTTTCTAGCCTCCAAAGCGATTGTTCACCAAAGTTTTTGTGCTTACACCCCCCAGAAAAATGGGGTTGCGGAGAGAAAAAACCGTCACCTTATGGAGTTTGCTTCCTTATGTTATCTACTTCCTTTCCCTCTTATCTGTGGGGCGAGGATGTTCTTGCTGTAGCTCATCTAATCAATCGGATGCCCTCTCGAGGCCTGCACATCTAGACTCCTTTAGAATGTCTCAAGGAGTTTTATCCCTCTACCCGTCTCATTCTTGATGTTTCCCTTCAGGTTTTTGGGTGCACGACCCATGTTCATAGCTATAACCCTAACCAGACCAAGTTCACCTTTTGGGCTCTGGCGTGTGTGTTTGTTGGGTATCCTCTTCATCAACGGGGCTATAAATGTTTCCATCATATTTTTCGTAAGTACTTTATCTCCATGGATGTCACCTTCCACGACAATCGTCTTTTCTTTCTCGTTAGCCTGCTTTAGGGGGAGTGTGTGAGTGAAAAGCCTAACTGTGTGGTTTCCTTAGAGTCTATCGTCCTACTCTTGTAACCTTACCCTTACTTGATCATGATCCTCATAACTCGGTCTTACCTACCAACCAAGTTCCCTGGATAACCTACTATAGGAGAAATCTCATAGAGGAAGTTGTCCCCTACTGTTCAGCCGACTCCAATCCAAGATTCTGAACCACTACGAGATCAAGGTATGACTAATTCTATTGATCCATATGTTGACAGTAAAATGTGTGAAAGTGACAGGTCCGATATAGTTCTTGAAGACATGAGTGAAAAGGGCAATGTTGATGAGATTGACGTCACGACAGAAATGGCAGGTGGTGAGGCTAAACAGGATCATTCACGTAACCTTGATGAGTATGATTCGTCTCTTGACATACCTATTTTGCTAAAGGAAGGTACTAGGTTCTGCATGAAGCACACCATGTGTAACTATGCTCTTACGAGAATTTATCACCCTAGTTCAAAGCTTTTACAACCAGTCTTTACTCCACCACGATACCTAAGAATATTCATATTGCATAAGAATGCCCTAAGTGGAAAACTGCAGTCATAGGAGAGATGAGAGCCCTTGAAAATAACAAAACTTGGAAGTTCTGAGCCCTTCCTAAGGGGCATAAAGCTGTTGGATGTAAATGGGTGTTTACTCTCGAATACGAAGCAGATGGAACTATAGATAGAAATAAGGCCAAGTTAATTGCAAAAGGGTTCACTTAGACTTATGAGGTTGACCACTCTGAGACTTTTTCTCCTATTGCGAAGTTAAACGCCATTGGGGTCTTGCTGTCTGTTGCCATGAATAAAGATTGGCCCCTATATCAACTAGATGTTAAGAACAGTTCTTGAATGGAGACTTAGAAGAGGAAGTATATGAGCCCTCCTCCAGACTTTGAAGCCCAGTTTGACCATCAAGTTTGCAAGCTTCAGAAATCCATGTATGGGTTGAGGCAATCACCGAGAGCTTGGTTTGGCAAATTTACCACCTTTGTCAAGTCCTAAAGATATAGTCACGGGCACTCTGATCACACTCAGTTCACCAAAATCTTCAAGGTTGGGAAAATTGTTGTGTTGATTGTCTACATTGATAACATTTTGTTATATGGGGATGACACCGTTGAGATCAAACCAACTTAAAAATAAGATGGGGGATGAATTTGAGATTAAAGACTTGGGGAATCTAAAATACTTCCTTAGGATGGAGGTAGCCAGATCTAAAGAAGGTATATCTCAGAGAAAGTACACCTTTGATTTGTTGACTAAAACAGGTATGATAGGATGTCGACTTGCTGACTCGCCTATCGAGTTCAATGTTAAACTGGGAAATTTAGTTGATAAAGTTCTAATTGAGAGAAAAATATTAGCGCCTAGTGGGGAAGTTGATCTACTTATCTTGCACTGAACCTAACATCTCTTATGTTATGGGTGGTTGGTCAGCCCATGGAGGCTCTTTACGAGGAACACATGGAGGCAGTTAACAGGATTATGAGGTATTTGAAAACTACTTTTGGTAAAGGGTTAATGTTCAGGAAGATTGACAGAAGGTATATTGAGGCTTGTACTGATGTTGATTAGGTAGGGTTTGTTGTTGATAGAAAATCCACCTCTAGGTACTGTACTTTTGTGTGGGGCAATCTCATTACTTAGAGGAGTAAGAAGCAAAAGGTTGTAGTCATAAGCACTGCTGAAGCTAAGTACATGGCTATGAGTTTGTGGATATGTGTGGAATTCTAACTCCAAAAGGTTACCAAGGATAGATTTTAATTTGTATACCCTAATTATTCTTTCTTTTTTTTAACTTAGGCTCTTGTTGCCTTAAGTTCCCTCTCTTGTACCTTTTTGTTCAATAAGAAAGTAATAAGAAGTTACCGTGGTTTTTCTCCCTCTATTAGGGTTTTCATGTAAACTTGTGTATTCATTCTTTATCTTCATTTTCAATAGTTTCAATAAGAATAAAAAGAGGAAGCAAGATTTACAACTAGAGAAACCCTCAGGAGGACTAAGATTTCACAATTGAAACTTCTTCCCCCTCCCCCACCACAAGATGGATGAAAGGAGGCCTATAATCCCCGTTGAACATTGGGTTGGGGAAGTTGGAAACCCGAACGAAGAAGAGAATGATGTCCTTGACGAATCAAGGCATCAACAACACAACGATTTTGCATGGCAGATAAATGATAAAAATTAGGAAACAGTCTCCCACTCATTTATCCTCCCCAAGAAGAGTACCCTTCCTACTATCCACCACGCACTGGATTATCAGAAAAAGAAGGGACCTCATTACAAATTTCCTTCCACGGGCTTTATGAATGTGCCTTTGACCTCACTCAAAATCTAATTGAAAGGACACGAACCGTACTTTCTCAAGATAATCCTAAACAACAGGTAAAGATACTCAATGGAAAATGATAACCATTTTGCCAACATTCTTTGTTTCTAGCTCAAGAAAGGGGTTAGTACGCTAGAAGCATTGACTTGTACAAGGCAACAGAAGAAGATTCCTTGATTTAAGGGAAATTCCCAGCAAGAATGCCAATTAGTCCTATAAATGTAAGATAAGCTCTTAAATTTTCTTTCCAAACTCAACTACGATTATTAATAGATCTTAACCAAAATCAAATCCAATTATTTGGTTCTACAATGATTGACAAATATTAACTTGAGAAAAAAAAAATTGGGAACTCAAATATCTTTGCCACCCAAAGTGGAAACCAATGCTGGTCTTTGTTTTACTTTTTTTTTTCTTGAATTCTCATGTTGCATATTCTTGACATCTGTCACATTGATGTCAGTCTTTCTCGTATCTCTCTTGTTTCTTTTTCTTTTTTTTTTGTTTTGTTTTGTTTTTGTTTTTTTTTTTTGTTTTGTTTTGTTTCTGGCTTCTCATCCTTTCTCAATTTTTCTTGCTGTATACAGTTGCAGAACTGGTCTGGAAGTCCACCTAATATGTATGATATAAGTGGAAGTGCGCACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGATCCTGAAAATGGTCCTATTGATCTCGTACAGGTAGTACAATTGTGGATATATTATAAAAACTATATGTTTCTTTGATTTCTGCGTACATTAGTTTCTTTGTATCCTTGCTACTTGTAGGTATGTGTACGAAAAGTGAGAAATAAGGTTGCAGGAACAATTGGGGAAGCTTATTTGGAATATAATAGGTATGTGAAGATCTTTTTCCAAAGTTTTTCAGGAATTCACATCTTGTATCTCACTTCTTGTGGTGATGATTGTTGTATATGCTTTCTTGAAATTAAGGATGTTGAACAATTAACATCATATATTCCTTATGATAAAAGTTTTATGGAGAAAACATTAGGTAGCAACATTTTCCGAGTCTTTTGAACAATGTATTTGATAGCAAACCGTTTCTTTTATTTTTGAGAACTACCATACAAACTGGTTACTCATTGTGGTTTTGCACACGGTGTACTATGGAGTTTGGCCAATTTCTTATTGAAGGATGGATTTGCCAAGGACTTCATACTGATACACATGGCACACTGAAATCAACAAACATAAAATCATTTAGAAAAAGTACCCCACTGTAGCCCTCTCTCCTCGTTGGTGCATTATGTGCAAGATGTCAAGAAATGGGTACAGTTTTTTCTCACATTCCCTTTGGTGACAGTTATTGGTCCAGTCTGAAATGGATCAAAAGGAATAACTCACCTGATAGAACACAGATATAATGTCTATGCTTTATTGATATCTCCAACAGAAATTACAATATAAAAGATAATGAATCACGACTATAGGACAATCAACAAACAAATAACTTCTACTATTCAGAATACTAAGAACAAGCAAATCAGAATAACAAGATCAAAACACAGAACAATAAAACCTGGCCTTCTGCTTCTCCTCTCTCTCAAGGAGTAATGCAAGAAATTGTTTGATGAGATATGTTGCACATACCAAAACAGTTTCTTTACCAGAATCTGAGGGGTCTTTGCCTTGAGTAATTTTGCCAAAAAGATTATGGTGCTCTTGTTGGAAGTGCATCCTTTCTGTTAGTTTTAGAGATTCTTTGTGGACAGGGGTTGCTGCTAATAGTATTCTGTTAGTCCTTAAGAGTTGGATAGTCGAGTTTACAACTTGCACCAGTCAAATGCCTTAGATTTCAATCTTCGAAACTAGTCTTCCTTCTAAGATTGATTGTTGTGTTTTAGAGTTAGGACTTTGAGACAACTTGTGGACAAAAGCCACCCCTTATGCCATCAACAGAACATGGGATTTCTTATATAACTCTGAATGATTCATGTAGTCGCTGGTCAGAATGTTATGAGGGATTAACAGGGAATATCCCTCTAATCTTTGGGAATGCAACTGGATCCCCTTTTTTTTTTAATTGAATTATTGAGTTTGGATGCAACCTTAGCCAGATCATTTGCTGCAAGGGTTGATTGACTTGAGTGTTGATCCCTCGATAGTTGAAATAACTGACAGTGATGGCATCTGGAGGTTTTCAGCTACCCAGTAGTTTCTTTTAATACGTATCCGTGTGGTTTCTGTTTGCAGAAACCCAACCTTGATGGTGTTCAAAGAACGAAACATAAATTCTTTTTAAATCTACCTAGATGTTTGGTTTGAGAGAAGGGGGGAAAGCACAGACCACTTTTGCTTTCATTATTAGCCCAATGATTGCGAGGTAAATGATTGACAATCATTACCTGTGGCTCTCTTGTACAATTCTCGTGTTTTCTGGAGTGTGTGATGTATTTAACCACAAGAGGATTCTTCACTTATTATGCTTAAATTCCAATTGCTATAATGTTCTAAAAATGCTTTGTTAAATGTTCAAGTTCATGTCATCGAGTAGCCAAATTGCAATACGCTCCCTCTATTCTCTCTTTATCAGCATGTCACTTTATCAATGTACTTTTATTTGAAACCCTTTGTTCCCTGTATATCTGCTATTGAAAGATGGACAATGGCTGTGTCAATGTGCTCATCAGGGTAACTGGAGAATTCTCGGATGCTGCTGGAGATATGAAACTTAAGAAGTCATCATGTTGAGAGGAGGTATGATGTTGATAGCCTTCACAAGTATTTTTTAAGGTCATTCATCCACTGCAATACTGTGAATTGTCGATCAATGCCAACCGTTGATTCGTACGTACAATTCACATTTATTAGCAATGTCGTCTTGTTTTGGGTGATTTATAGGATGCAAGAAGAAATTATTAAGTTGATGGTTGTGTGGTGTTATATTAGGAAATTTTGACACAACTTTGCTGAAATAATAGGTCGCACTAGAATACTATCTTTCCTCCATTCAATGTAAGTTTCTGTTCTAAAGTTGTATAAAGCGATTTGAGATCTTAAAGCAAAATGATCAGGAAATTTTTGTTCGAAATGAATGGAGGACTAAAACAAACAAGAGTTATCTTGATAATTTATCAAATTATTTTGATATGAAATGAA

mRNA sequence

GAAAAGGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTTCTGGATTGGTAATTGATCCTTATAATGAGCTTGACCATCAACGGCTTCCAAATCAAACTGAAACAGAGTATGTGAGCCAGATGCTTACTAAGGTCAAACGGTTTGCTCATCATCATGGTTGCCATGTTTGGTTTGTTGCACATCCTAGGCAGTTGCAGAACTGGTCTGGAAGTCCACCTAATATGTATGATATAAGTGGAAGTGCGCACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGATCCTGAAAATGGTCCTATTGATCTCGTACAGGTATGTGTACGAAAAGTGAGAAATAAGGTTGCAGGAACAATTGGGGAAGCTTATTTGGAATATAATAGGGTAACTGGAGAATTCTCGGATGCTGCTGGAGATATGAAACTTAAGAAGTCATCATGTTGAGAGGAGGTATGATGTTGATAGCCTTCACAAGTATTTTTTAAGGTCATTCATCCACTGCAATACTGTGAATTGTCGATCAATGCCAACCGTTGATTCGTACGTACAATTCACATTTATTAGCAATGTCGTCTTGTTTTGGGTGATTTATAGGATGCAAGAAGAAATTATTAAGTTGATGGTTGTGTGGTGTTATATTAGGAAATTTTGACACAACTTTGCTGAAATAATAGGTCGCACTAGAATACTATCTTTCCTCCATTCAATGTAAGTTTCTGTTCTAAAGTTGTATAAAGCGATTTGAGATCTTAAAGCAAAATGATCAGGAAATTTTTGTTCGAAATGAATGGAGGACTAAAACAAACAAGAGTTATCTTGATAATTTATCAAATTATTTTGATATGAAATGAA

Coding sequence (CDS)

ATGCTTACTAAGGTCAAACGGTTTGCTCATCATCATGGTTGCCATGTTTGGTTTGTTGCACATCCTAGGCAGTTGCAGAACTGGTCTGGAAGTCCACCTAATATGTATGATATAAGTGGAAGTGCGCACTTCATAAACAAATGTGATAATGGAATTGTTATTCATCGTAATAGGGATCCTGAAAATGGTCCTATTGATCTCGTACAGGTATGTGTACGAAAAGTGAGAAATAAGGTTGCAGGAACAATTGGGGAAGCTTATTTGGAATATAATAGGGTAACTGGAGAATTCTCGGATGCTGCTGGAGATATGAAACTTAAGAAGTCATCATGTTGA

Protein sequence

MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDPENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSSC*
Homology
[Close]
BLAST of MELO3C002865 vs. Swiss-Prot
Match: TWIH_ARATH (Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g30680 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 4.3e-42
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRF+ HH CHVWFVAHP+QLQ+W G  PN+YDISGSAHFINKCDNGI++HRNRD 
Sbjct: 595 MLTKIKRFSQHHSCHVWFVAHPKQLQHWDGGAPNLYDISGSAHFINKCDNGIIVHRNRDE 654

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDA 101
             GP+DLVQ+ VRKVRNKVAG IG+AYL Y+R TG +SD+
Sbjct: 655 NAGPLDLVQIGVRKVRNKVAGQIGDAYLCYDRTTGSYSDS 694

[Close]
BLAST of MELO3C002865 vs. TrEMBL
Match: A0A0A0LYM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G541890 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.1e-56
Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTKVKRFA HHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 607 MLTKVKRFAQHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 666

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSS 111
           E+GPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEF DAAGD+KLKK S
Sbjct: 667 ESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAGDVKLKKPS 716

[Close]
BLAST of MELO3C002865 vs. TrEMBL
Match: A0A022PW97_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002055mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-47
Identity = 86/99 (86.87%), Postives = 92/99 (92.93%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRFA HH CHVWFVAHPRQLQNW GSPPN+YDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 610 MLTKIKRFAQHHSCHVWFVAHPRQLQNWVGSPPNLYDISGSAHFINKCDNGIVIHRNRDP 669

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSD 100
           E GP+D+VQVCVRKVRNKV GTIG+AYL YNRVTGE+ D
Sbjct: 670 EAGPVDIVQVCVRKVRNKVVGTIGDAYLSYNRVTGEYMD 708

[Close]
BLAST of MELO3C002865 vs. TrEMBL
Match: J3MGR8_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.2e-45
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRFA HH CHVWFVAHPRQL NW+G PPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 478 MLTKIKRFAQHHSCHVWFVAHPRQLHNWNGGPPNMYDISGSAHFINKCDNGIVIHRNRDP 537

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLK 108
            +GP+D+VQVCVRKVRNKV G IG+A+L Y+RV+GEF DA  D   K
Sbjct: 538 NSGPVDVVQVCVRKVRNKVIGQIGDAFLSYDRVSGEFRDADKDTVAK 584

[Close]
BLAST of MELO3C002865 vs. TrEMBL
Match: A0A0E0E579_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-45
Identity = 84/107 (78.50%), Postives = 92/107 (85.98%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRFA HH CHVWFVAHPRQL NW+G PPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 623 MLTKIKRFAQHHSCHVWFVAHPRQLHNWNGGPPNMYDISGSAHFINKCDNGIVIHRNRDP 682

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLK 108
            +GP+D+VQVCVRKVRNKV G IG+A+L Y RV+GEF DA  D   K
Sbjct: 683 NSGPLDVVQVCVRKVRNKVIGQIGDAFLSYERVSGEFRDADKDTAKK 729

[Close]
BLAST of MELO3C002865 vs. TrEMBL
Match: B8B177_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24073 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-45
Identity = 84/107 (78.50%), Postives = 92/107 (85.98%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRFA HH CHVWFVAHPRQL NW+G PPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 576 MLTKIKRFAQHHSCHVWFVAHPRQLHNWNGGPPNMYDISGSAHFINKCDNGIVIHRNRDP 635

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLK 108
            +GP+D+VQVCVRKVRNKV G IG+A+L Y RV+GEF DA  D   K
Sbjct: 636 NSGPLDVVQVCVRKVRNKVIGQIGDAFLSYERVSGEFRDADKDTAKK 682

[Close]
BLAST of MELO3C002865 vs. TAIR10
Match: AT1G30680.1 (AT1G30680.1 toprim domain-containing protein)

HSP 1 Score: 171.8 bits (434), Expect = 2.4e-43
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRF+ HH CHVWFVAHP+QLQ+W G  PN+YDISGSAHFINKCDNGI++HRNRD 
Sbjct: 595 MLTKIKRFSQHHSCHVWFVAHPKQLQHWDGGAPNLYDISGSAHFINKCDNGIIVHRNRDE 654

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDA 101
             GP+DLVQ+ VRKVRNKVAG IG+AYL Y+R TG +SD+
Sbjct: 655 NAGPLDLVQIGVRKVRNKVAGQIGDAYLCYDRTTGSYSDS 694

[Close]
BLAST of MELO3C002865 vs. NCBI nr
Match: gi|659068706|ref|XP_008445781.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-60
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 619 MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 678

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSSC 112
           ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSSC
Sbjct: 679 ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSSC 729

[Close]
BLAST of MELO3C002865 vs. NCBI nr
Match: gi|778662016|ref|XP_011659233.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 3.1e-56
Identity = 105/110 (95.45%), Postives = 107/110 (97.27%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTKVKRFA HHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 607 MLTKVKRFAQHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 666

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSS 111
           E+GPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEF DAAGD+KLKK S
Sbjct: 667 ESGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFLDAAGDVKLKKPS 716

[Close]
BLAST of MELO3C002865 vs. NCBI nr
Match: gi|778662022|ref|XP_011659237.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-51
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLT+VK+FA H+ CHVWFVAHP QLQNWSG PPNM+DISG+AHFINKCDNGIVIHRNRDP
Sbjct: 604 MLTEVKQFAQHNACHVWFVAHPMQLQNWSGCPPNMHDISGNAHFINKCDNGIVIHRNRDP 663

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKKSS 111
           E+GPIDLVQVCVRKVRNKVAGTIGEAYL YNRVTGEF DAAGDMKLKK S
Sbjct: 664 ESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRVTGEFFDAAGDMKLKKPS 713

[Close]
BLAST of MELO3C002865 vs. NCBI nr
Match: gi|747097482|ref|XP_011096707.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Sesamum indicum])

HSP 1 Score: 199.5 bits (506), Expect = 3.1e-48
Identity = 90/108 (83.33%), Postives = 95/108 (87.96%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRFA HHGCHVWFVAHPRQL NW G PPNMYDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 518 MLTKIKRFAQHHGCHVWFVAHPRQLHNWIGGPPNMYDISGSAHFINKCDNGIVIHRNRDP 577

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSDAAGDMKLKK 109
           E GP+DLVQVCVRKVRNKV GTIG+AYL YNRVTGE+SD      +KK
Sbjct: 578 EAGPVDLVQVCVRKVRNKVIGTIGDAYLSYNRVTGEYSDIDAAALIKK 625

[Close]
BLAST of MELO3C002865 vs. NCBI nr
Match: gi|848927525|ref|XP_012827508.1| (PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Erythranthe guttata])

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-47
Identity = 86/99 (86.87%), Postives = 92/99 (92.93%), Query Frame = 1 

Query: 1   MLTKVKRFAHHHGCHVWFVAHPRQLQNWSGSPPNMYDISGSAHFINKCDNGIVIHRNRDP 60
           MLTK+KRFA HH CHVWFVAHPRQLQNW GSPPN+YDISGSAHFINKCDNGIVIHRNRDP
Sbjct: 610 MLTKIKRFAQHHSCHVWFVAHPRQLQNWVGSPPNLYDISGSAHFINKCDNGIVIHRNRDP 669

Query: 61  ENGPIDLVQVCVRKVRNKVAGTIGEAYLEYNRVTGEFSD 100
           E GP+D+VQVCVRKVRNKV GTIG+AYL YNRVTGE+ D
Sbjct: 670 EAGPVDIVQVCVRKVRNKVVGTIGDAYLSYNRVTGEYMD 708

The following BLAST results are available for this feature:
BLAST of MELO3C002865 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TWIH_ARATH4.3e-4274.00Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=... [more]
BLAST of MELO3C002865 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYM8_CUCSA2.1e-5695.45Uncharacterized protein OS=Cucumis sativus GN=Csa_1G541890 PE=4 SV=1[more]
A0A022PW97_ERYGU3.1e-4786.87Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002055mg PE=4 SV=1[more]
J3MGR8_ORYBR2.2e-4578.50Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
A0A0E0E579_9ORYZ3.8e-4578.50Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1[more]
B8B177_ORYSI3.8e-4578.50Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24073 PE=4... [more]
BLAST of MELO3C002865 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30680.12.4e-4374.00 toprim domain-containing protein[more]
BLAST of MELO3C002865 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068706|ref|XP_008445781.1|1.6e-60100.00PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Cucu... [more]
gi|778662016|ref|XP_011659233.1|3.1e-5695.45PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Cucumis sativus... [more]
gi|778662022|ref|XP_011659237.1|2.3e-5188.18PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1 ... [more]
gi|747097482|ref|XP_011096707.1|3.1e-4883.33PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Sesamum indicum... [more]
gi|848927525|ref|XP_012827508.1|4.4e-4786.87PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Eryt... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007694DNA_helicase_DnaB-like_C
IPR027032Twinkle-like protein
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO:0005524ATP binding
GO:0003697single-stranded DNA binding
GO:00431395'-3' DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006260 DNA replication
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0005657 replication fork
molecular_function GO:0043139 5'-3' DNA helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003678 DNA helicase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU59006melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C002865T1MELO3C002865T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59006MU59006transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007694DNA helicase, DnaB-like, C-terminalPROFILEPS51199SF4_HELICASEcoord: 1..104
score: 21
IPR027032Twinkle-like proteinPANTHERPTHR12873T7-LIKE MITOCHONDRIAL DNA HELICASEcoord: 1..99
score: 4.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 2..101
score: 1.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..86
score: 4.1
NoneNo IPR availablePANTHERPTHR12873:SF0TWINKLE PROTEIN, MITOCHONDRIALcoord: 1..99
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C002865Csa1G541900Cucumber (Chinese Long) v2cumeB031
MELO3C002865CSPI01G25250Wild cucumber (PI 183967)cpimeB028
MELO3C002865Cucsa.167350Cucumber (Gy14) v1cgymeB297
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C002865Silver-seed gourdcarmeB0400
MELO3C002865Cucumber (Chinese Long) v3cucmeB028
MELO3C002865Watermelon (97103) v2mewmbB157
MELO3C002865Wax gourdmewgoB164
MELO3C002865Cucurbita maxima (Rimu)cmameB192
MELO3C002865Cucurbita maxima (Rimu)cmameB364
MELO3C002865Cucurbita moschata (Rifu)cmomeB179
MELO3C002865Cucurbita moschata (Rifu)cmomeB356
MELO3C002865Watermelon (Charleston Gray)mewcgB153
MELO3C002865Watermelon (97103) v1mewmB150
MELO3C002865Cucurbita pepo (Zucchini)cpemeB477
MELO3C002865Bottle gourd (USVL1VR-Ls)lsimeB179
MELO3C002865Cucumber (Gy14) v2cgybmeB027